ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags22o04 |
|---|---|
| Clone Library Name | barley_pub |
>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Reversibly glycosylated polypeptide) Length = 364 Score = 236 bits (603), Expect = 3e-62 Identities = 109/212 (51%), Positives = 160/212 (75%), Gaps = 2/212 (0%) Frame = +3 Query: 3 PFFSRFDIIVVKDPELAADLQIPSGFNVKVYTKSDIDGLLG--ATSINFSGHSCRYFGYL 176 PFF ++ +I+V+D + + +++P GF+ ++Y ++DI+ +LG A+ I+F +CR FGY+ Sbjct: 33 PFFEQYHLIIVQDGDPSKVIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYM 92 Query: 177 VSRKKYVISIDDNCLPAKDPAGMTVDAVTQHMVNLKTPATPFFFNTLYDPYRKGADFVRG 356 VS+KKY+ +IDD+C AKDP G ++A+ QH+ NL +P+TPFFFNTLYDPYR+G DFVRG Sbjct: 93 VSKKKYIYTIDDDCFVAKDPTGHEINALEQHIKNLLSPSTPFFFNTLYDPYREGTDFVRG 152 Query: 357 YPFSLREGVECMLSCGLWLHNADYDPMTHVVKRNQRNTNYVDAVMTVPLGAMFPVSGINV 536 YPFSLREGV +S GLWL+ DYD T +VK ++RNT +VDAV+T+P G++FP+ G+N+ Sbjct: 153 YPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPHERNTRFVDAVLTIPKGSLFPMCGMNL 212 Query: 537 AFNREVLGPVMFPGLRIRKEGKHRWDTLEDIW 632 AFNRE++GP M+ GL + R+D D+W Sbjct: 213 AFNRELIGPAMYFGLMGDGQPIGRYD---DMW 241
>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) Length = 366 Score = 231 bits (590), Expect = 1e-60 Identities = 108/212 (50%), Positives = 155/212 (73%), Gaps = 2/212 (0%) Frame = +3 Query: 3 PFFSRFDIIVVKDPELAADLQIPSGFNVKVYTKSDIDGLLG--ATSINFSGHSCRYFGYL 176 PFF + +I+V+D + + + +P GF+ ++Y ++DI+ +LG A+ I+F +CR FGY+ Sbjct: 34 PFFQPYHLIIVQDGDPSKIINVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYM 93 Query: 177 VSRKKYVISIDDNCLPAKDPAGMTVDAVTQHMVNLKTPATPFFFNTLYDPYRKGADFVRG 356 VS+KKY+ +IDD+C AKDP+G ++A+ QH+ NL P+TP FFNTLYDPYR+GADFVRG Sbjct: 94 VSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTLYDPYREGADFVRG 153 Query: 357 YPFSLREGVECMLSCGLWLHNADYDPMTHVVKRNQRNTNYVDAVMTVPLGAMFPVSGINV 536 YPFS+REG +S GLWL+ DYD T +VK +RNT YVDAVMT+P G +FP+ G+N+ Sbjct: 154 YPFSMREGAATAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVMTIPKGTLFPMCGMNL 213 Query: 537 AFNREVLGPVMFPGLRIRKEGKHRWDTLEDIW 632 AF+RE++GP M+ GL + R+D D+W Sbjct: 214 AFDRELIGPAMYFGLMGDGQPIGRYD---DMW 242
>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Amylogenin) (Golgi-associated protein se-wap41) Length = 364 Score = 231 bits (588), Expect = 2e-60 Identities = 107/211 (50%), Positives = 155/211 (73%), Gaps = 2/211 (0%) Frame = +3 Query: 6 FFSRFDIIVVKDPELAADLQIPSGFNVKVYTKSDIDGLLG--ATSINFSGHSCRYFGYLV 179 FF + +I+V+D + +++P GF+ ++Y ++DI+ +LG A+ I+F +CR FGY+V Sbjct: 41 FFQPYHLIIVQDGDPTKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMV 100 Query: 180 SRKKYVISIDDNCLPAKDPAGMTVDAVTQHMVNLKTPATPFFFNTLYDPYRKGADFVRGY 359 S+KKY+ +IDD+C AKDP+G ++A+ QH+ NL +P+TPFFFNTLYDPYR+GADFVRGY Sbjct: 101 SKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGY 160 Query: 360 PFSLREGVECMLSCGLWLHNADYDPMTHVVKRNQRNTNYVDAVMTVPLGAMFPVSGINVA 539 PFSLREG +S GLWL+ DYD T +VK +RN YVDAVMT+P G +FP+ G+N+A Sbjct: 161 PFSLREGAHTAVSHGLWLNIPDYDAPTQLVKPKERNERYVDAVMTIPKGTLFPMCGMNLA 220 Query: 540 FNREVLGPVMFPGLRIRKEGKHRWDTLEDIW 632 F+R+++GP M+ GL + R+D D+W Sbjct: 221 FDRDLIGPAMYFGLMGDGQPIGRYD---DMW 248
>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) Length = 365 Score = 230 bits (587), Expect = 2e-60 Identities = 107/212 (50%), Positives = 156/212 (73%), Gaps = 2/212 (0%) Frame = +3 Query: 3 PFFSRFDIIVVKDPELAADLQIPSGFNVKVYTKSDIDGLLG--ATSINFSGHSCRYFGYL 176 PFF + +I+V+D + + +++P GF+ ++Y ++DI+ +LG A+ I+F +CR FGY+ Sbjct: 30 PFFQPYHLIIVQDGDPSKIIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYM 89 Query: 177 VSRKKYVISIDDNCLPAKDPAGMTVDAVTQHMVNLKTPATPFFFNTLYDPYRKGADFVRG 356 VS+KKY+ +IDD+C AKDP+G ++A+ QH+ NL P+TP FFNTLYDPYR GADFVRG Sbjct: 90 VSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTLYDPYRDGADFVRG 149 Query: 357 YPFSLREGVECMLSCGLWLHNADYDPMTHVVKRNQRNTNYVDAVMTVPLGAMFPVSGINV 536 YPFS+REG +S GLWL+ DYD T +VK ++RNT YVDAVMT+P G +FP+ G+N+ Sbjct: 150 YPFSMREGAPTAVSHGLWLNIPDYDAPTQLVKPHERNTRYVDAVMTIPKGTLFPMCGMNL 209 Query: 537 AFNREVLGPVMFPGLRIRKEGKHRWDTLEDIW 632 AF+R+++GP M+ GL + R+D D+W Sbjct: 210 AFDRDLIGPAMYFGLMGDGQPIGRYD---DMW 238
>CSF1_YEAST (Q12150) Protein CSF1 (Cold sensitive for fermentation protein 1)| Length = 2958 Score = 32.3 bits (72), Expect = 1.2 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Frame = -2 Query: 391 MHSTPSRRLNGYPRTKSAPLRY-----GSYSVLKKKGVAGVFRLTMCCVTASTVMPAGSF 227 +++ P LN + + K Y GSY + + + V L + C + STV+ F Sbjct: 701 LNTPPWNTLNEFMKHKEVGRAYDFTIKGSYLLYSELDIDNVDTLVIECNSKSTVLHCYGF 760 Query: 226 AGRQLSSIEMTYF 188 R L++++M YF Sbjct: 761 VMRYLTNVKMNYF 773
>LEPA_SYNPX (Q7U5L9) GTP-binding protein lepA| Length = 606 Score = 31.2 bits (69), Expect = 2.7 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 9/55 (16%) Frame = +3 Query: 195 VISID-DNCLPAKDPAGMTVDAVTQHMVN--------LKTPATPFFFNTLYDPYR 332 +I +D DN +P G+ V + Q +V+ L+ P F++ YDPYR Sbjct: 155 IIGLDCDNAIPCSAKTGLGVPEILQAVVDRVPPPKDALEEPTKALIFDSYYDPYR 209
>LEPA_AQUAE (O67618) GTP-binding protein lepA| Length = 600 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 9/76 (11%) Frame = +3 Query: 195 VISID-DNCLPAKDPAGMTVDAVTQHMVNL--------KTPATPFFFNTLYDPYRKGADF 347 V+ +D + + A G+ ++ + + +VN + P F++ YDPYR F Sbjct: 152 VLGLDPEEAILASAKEGIGIEEILEAIVNRIPPPKGDPQKPLKALIFDSYYDPYRGAVAF 211 Query: 348 VRGYPFSLREGVECML 395 VR + ++ G + ML Sbjct: 212 VRIFDGEVKPGDKIML 227
>MRAW_PSEHT (Q3IFZ6) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 312 Score = 30.4 bits (67), Expect = 4.6 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +3 Query: 321 DPYRKGADFVRGYPFSLREGVECMLSCGLWLHNADYDPMTHVVKR 455 D +G F++ P +R S WL A+ D +THV+K+ Sbjct: 111 DDALRGFSFMKDGPLDMRMDPTTGRSAAQWLAEAELDDITHVIKK 155
>CO8B_ONCMY (Q90X85) Complement component C8 beta chain precursor (Complement| component 8 beta subunit) Length = 587 Score = 30.4 bits (67), Expect = 4.6 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = -1 Query: 620 KGVPPVLPFLANPEAREHHGPQNLAVECNIYPAHRE 513 KG P V P EA+E+HG +NLA NI +H E Sbjct: 149 KGSPKV-PKACKQEAQEYHGIENLAKGINILHSHLE 183
>HMEN_DROVI (P09145) Segmentation polarity homeobox protein engrailed| Length = 584 Score = 30.0 bits (66), Expect = 6.0 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +1 Query: 13 PGSTSLLSKIQSWQQI--FRSLQALMSRFTQSLTLMDCLVQHPSTSLAIHAVTLGTLSHA 186 PG+ + + + QQ+ LQ L Q L + HPSTS A A L HA Sbjct: 53 PGTAATAATLYQQQQLQHLHQLQQLQQLHQQQLAASAGVFHHPSTSAAFDAAAL----HA 108 Query: 187 RSMSSQLTTIAS 222 ++ +L+ S Sbjct: 109 AALQQRLSASGS 120
>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2505 Score = 30.0 bits (66), Expect = 6.0 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -2 Query: 433 GS*SALCSHRPHESMHSTPSRRLNGYPRTKSAPLRYGSYS-VLKKKGVAG 287 GS S S P S STP R P+T S P + SYS V++K G +G Sbjct: 2262 GSSSVSGSPAPSTSGTSTPRRGRRQLPQTPSTPRPHVSYSPVIRKAGGSG 2311
>FANCJ_MOUSE (Q5SXJ3) Fanconi anemia group J protein homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase BRIP1) (Protein FACJ) (BRCA1-interacting protein C-terminal helicase 1) (BRCA1-interacting protein 1) (BRCA1-associated C-terminal helicase 1) Length = 1174 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = -2 Query: 631 HMSSRVSHLCFPSLRIRRPGNITGPRTSRLNATFIPLTGNIAPSGTVITAS 479 H +S+V + C P L+ + P +S N T +PLTGN PS S Sbjct: 1015 HFNSKVKN-CTPVLKSSKN---RAPGSSTFNKTALPLTGNCVPSNETADTS 1061 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,595,182 Number of Sequences: 219361 Number of extensions: 2388648 Number of successful extensions: 7358 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 6788 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7351 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
