ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags22o01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, ... 278 2e-71
2gb|AY054376.1| Hordeum vulgare Sukkula retrotransposon long term... 250 5e-63
3gb|AF453665.1| Hordeum vulgare isolate HV Sukkula retrotransposo... 196 6e-47
4gb|AY054377.1| Hordeum vulgare clone LTR-INS1 Sukkula retrotrans... 196 6e-47
5gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, geno... 54 6e-04
6gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, comple... 50 0.009
7gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complet... 46 0.15
8gb|AY054379.1| Hordeum murinum clone HmuLTR-INS Sukkula retrotra... 46 0.15
9gb|AE000783.1| Borrelia burgdorferi B31, complete genome 46 0.15
10emb|AJ224476.1|BBU224476 Borrelia burgdorferi left chromosomal s... 46 0.15
11gb|AF008218.1|AF008218 Borrelia burgdorferi Sh-2-82 left chromos... 46 0.15
12gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones B... 42 2.3
13emb|Z81584.1|CET04C12 Caenorhabditis elegans Cosmid T04C12, comp... 42 2.3
14gb|AC018653.29| Homo sapiens 12 BAC RP11-273B20 (Roswell Park Ca... 42 2.3
15gb|AE016830.1| Enterococcus faecalis V583, complete genome 42 2.3
16emb|CR847828.13| Zebrafish DNA sequence from clone DKEY-36I7 in ... 42 2.3
17gb|AC173482.1| Mus musculus BAC clone RP23-383F20 from chromosom... 42 2.3
18emb|AL844597.12| Zebrafish DNA sequence from clone DKEY-9M10 in ... 40 9.0
19gb|AC105243.5| Homo sapiens chromosome 18, clone CTD-2354A18, co... 40 9.0
20gb|AC051663.9|AC051663 Homo sapiens BAC clone RP11-475P15 from Y... 40 9.0
21gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C... 40 9.0
22emb|BX276096.4| Zebrafish DNA sequence from clone CH211-240J18 i... 40 9.0
23emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chr... 40 9.0
24emb|AL929375.5| Mouse DNA sequence from clone RP23-49G18 on chro... 40 9.0
25gb|AC090947.2| Homo sapiens chromosome 3 clone RP11-30G23 map 3p... 40 9.0
26gb|AC018500.4| Homo sapiens chromosome 3 clone RP11-275J11 map 3... 40 9.0
27gb|L31531.1|SCMPFK Schistosoma mansoni phosphofructokinase (PFK)... 40 9.0 
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence
          Length = 439641

 Score =  278 bits (140), Expect = 2e-71
 Identities = 234/264 (88%), Gaps = 1/264 (0%)
 Strand = Plus / Plus

                                                                          
Query: 394    gtagattaataattttcaactctcatgcataatcagaactgtttagtttgctgtttgcat 453
              ||||||||| ||||||||||| ||||||||  |||   ||||| ||  || |||||||||
Sbjct: 324918 gtagattaacaattttcaactatcatgcatgttcaaggctgtt-agcgtgttgtttgcat 324976

                                                                          
Query: 454    cggtttacgtgtcgacgtgttgaaaacggtttaggtcgtaactatttgtccgtagcttcg 513
              |||||| |||| |||||||| ||||||||||||||||||||||||||  |||||||| ||
Sbjct: 324977 cggtttgcgtgccgacgtgtggaaaacggtttaggtcgtaactatttaaccgtagctccg 325036

                                                                          
Query: 514    ttggagttgtgccatatatgtaaatggagcagaatgacgagtagaatcacgtgaaccact 573
              |||||| ||||||||||||||||||||  ||| |  |||||||||| |||||||| ||||
Sbjct: 325037 ttggagatgtgccatatatgtaaatgggccagtacaacgagtagaaacacgtgaaacact 325096

                                                                          
Query: 574    ttgattttccgtttaacaaacctaaaatgtgattaggacaaatctggacagaattaagtt 633
              ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 325097 ttgttttgccgtttaacaaacctaaaatgtgattaggacaaatctggacagaattaagat 325156

                                      
Query: 634    ttaacacgtggggtcatttcggag 657
              ||||||  ||||||||||||||||
Sbjct: 325157 ttaacatatggggtcatttcggag 325180



 Score =  190 bits (96), Expect = 4e-45
 Identities = 111/116 (95%)
 Strand = Plus / Plus

                                                                          
Query: 512    cgttggagttgtgccatatatgtaaatggagcagaatgacgagtagaatcacgtgaacca 571
              |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 129496 cgttggagatgtgccatatatgtaaatggagcagaacgacgagtataatcacgtgaacca 129555

                                                                      
Query: 572    ctttgattttccgtttaacaaacctaaaatgtgattaggacaaatctggacagaat 627
              ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129556 ctttgttttttcgtttaacaaacctaaaatgtgattaggacaaatctggacagaat 129611



 Score =  182 bits (92), Expect = 1e-42
 Identities = 110/116 (94%)
 Strand = Plus / Plus

                                                                          
Query: 512    cgttggagttgtgccatatatgtaaatggagcagaatgacgagtagaatcacgtgaacca 571
              |||||||| ||||||||||||||||||||||||||| |||||||| ||||||| ||||||
Sbjct: 176829 cgttggagatgtgccatatatgtaaatggagcagaacgacgagtataatcacgcgaacca 176888

                                                                      
Query: 572    ctttgattttccgtttaacaaacctaaaatgtgattaggacaaatctggacagaat 627
              ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 176889 ctttgtttttccgtttaacaaacctaaaatgtgattaggacaaatctgaacagaat 176944
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>gb|AY054376.1| Hordeum vulgare Sukkula retrotransposon long terminal repeat, partial
            and complete sequences
          Length = 11820

 Score =  250 bits (126), Expect = 5e-63
 Identities = 241/277 (87%), Gaps = 3/277 (1%)
 Strand = Plus / Plus

                                                                        
Query: 383  tagaatttcacgtagattaataatttt--caactctcatgcataatcagaactgtttagt 440
            |||||||||||||||||||||| ||||  |||||||||||||   | | ||||||| || 
Sbjct: 9513 tagaatttcacgtagattaatatttttttcaactctcatgcacgtttaaaactgtt-agc 9571

                                                                        
Query: 441  ttgctgtttgcatcggtttacgtgtcgacgtgttgaaaacggtttaggtcgtaactattt 500
             |||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||
Sbjct: 9572 gtgctgtttgcatcggtttgcgtgtcgacgtgttgaaaacggtttaggtcatagctattt 9631

                                                                        
Query: 501  gtccgtagcttcgttggagttgtgccatatatgtaaatggagcagaatgacgagtagaat 560
             ||||||||| |||||||| || |||||||||||||||||   |||| |||  || |  |
Sbjct: 9632 atccgtagctccgttggagatgagccatatatgtaaatgggctagaacgacatgttgttt 9691

                                                                        
Query: 561  cacgtgaaccactttgattttccgtttaacaaacctaaaatgtgattaggacaaatctgg 620
            |||||||||||||||| ||   |||||||||||  |||||||||||||||||||||||||
Sbjct: 9692 cacgtgaaccactttgtttcgacgtttaacaaatttaaaatgtgattaggacaaatctgg 9751

                                                 
Query: 621  acagaattaagttttaacacgtggggtcatttcggag 657
            |||||||||   |||||||||||||||||||||||||
Sbjct: 9752 acagaattagaatttaacacgtggggtcatttcggag 9788



 Score =  196 bits (99), Expect = 6e-47
 Identities = 246/291 (84%), Gaps = 3/291 (1%)
 Strand = Plus / Plus

                                                                        
Query: 369  atatgtaacttgcctagaatttcacgtagattaataattttcaactctcatgcataatca 428
            ||||| |||||| |||||||||  |||||||||| ||||| ||||||||||||||  | |
Sbjct: 1919 atatgaaacttgactagaattttgcgtagattaacaatttacaactctcatgcatgttta 1978

                                                                        
Query: 429  gaactgtttagtttgctgtttgcatcggtttacgtgtcgacgtgttgaaaa-cggtttag 487
               ||||| ||   ||||||||  |||||||||| ||| | |||||||||| ||| ||||
Sbjct: 1979 aggctgtt-agcacgctgtttgtgtcggtttacgggtcaatgtgttgaaaaacgggttag 2037

                                                                        
Query: 488  g-tcgtaactatttgtccgtagcttcgttggagttgtgccatatatgtaaatggagcaga 546
            | |||||  |||||  |||||||| |||||||| ||| | |||||||||||| ||| |||
Sbjct: 2038 ggtcgtagttatttaaccgtagctccgttggagatgttctatatatgtaaatcgagtaga 2097

                                                                        
Query: 547  atgacgagtagaatcacgtgaaccactttgattttccgtttaacaaacctaaaatgtgat 606
            | |||| |||||||| | ||  |||||||| ||    |||||||||||||||||||||||
Sbjct: 2098 acgacgtgtagaatctcatgctccactttgtttcgttgtttaacaaacctaaaatgtgat 2157

                                                               
Query: 607  taggacaaatctggacagaattaagttttaacacgtggggtcatttcggag 657
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2158 taggacaaatctggacagaattaagttttaacacgtggggtcatttcggag 2208
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>gb|AF453665.1| Hordeum vulgare isolate HV Sukkula retrotransposon, partial sequence
          Length = 7674

 Score =  196 bits (99), Expect = 6e-47
 Identities = 246/291 (84%), Gaps = 3/291 (1%)
 Strand = Plus / Plus

                                                                        
Query: 369  atatgtaacttgcctagaatttcacgtagattaataattttcaactctcatgcataatca 428
            ||||| |||||| |||||||||  |||||||||| ||||| ||||||||||||||  | |
Sbjct: 1919 atatgaaacttgactagaattttgcgtagattaacaatttacaactctcatgcatgttta 1978

                                                                        
Query: 429  gaactgtttagtttgctgtttgcatcggtttacgtgtcgacgtgttgaaaa-cggtttag 487
               ||||| ||   ||||||||  |||||||||| ||| | |||||||||| ||| ||||
Sbjct: 1979 aggctgtt-agcacgctgtttgtgtcggtttacgggtcaatgtgttgaaaaacgggttag 2037

                                                                        
Query: 488  g-tcgtaactatttgtccgtagcttcgttggagttgtgccatatatgtaaatggagcaga 546
            | |||||  |||||  |||||||| |||||||| ||| | |||||||||||| ||| |||
Sbjct: 2038 ggtcgtagttatttaaccgtagctccgttggagatgttctatatatgtaaatcgagtaga 2097

                                                                        
Query: 547  atgacgagtagaatcacgtgaaccactttgattttccgtttaacaaacctaaaatgtgat 606
            | |||| |||||||| | ||  |||||||| ||    |||||||||||||||||||||||
Sbjct: 2098 acgacgtgtagaatctcatgctccactttgtttcgttgtttaacaaacctaaaatgtgat 2157

                                                               
Query: 607  taggacaaatctggacagaattaagttttaacacgtggggtcatttcggag 657
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2158 taggacaaatctggacagaattaagttttaacacgtggggtcatttcggag 2208
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>gb|AY054377.1| Hordeum vulgare clone LTR-INS1 Sukkula retrotransposon long terminal
            repeat, complete sequence
          Length = 7575

 Score =  196 bits (99), Expect = 6e-47
 Identities = 246/291 (84%), Gaps = 3/291 (1%)
 Strand = Plus / Plus

                                                                        
Query: 369  atatgtaacttgcctagaatttcacgtagattaataattttcaactctcatgcataatca 428
            ||||| |||||| |||||||||  |||||||||| ||||| ||||||||||||||  | |
Sbjct: 1919 atatgaaacttgactagaattttgcgtagattaacaatttacaactctcatgcatgttta 1978

                                                                        
Query: 429  gaactgtttagtttgctgtttgcatcggtttacgtgtcgacgtgttgaaaa-cggtttag 487
               ||||| ||   ||||||||  |||||||||| ||| | |||||||||| ||| ||||
Sbjct: 1979 aggctgtt-agcacgctgtttgtgtcggtttacgggtcaatgtgttgaaaaacgggttag 2037

                                                                        
Query: 488  g-tcgtaactatttgtccgtagcttcgttggagttgtgccatatatgtaaatggagcaga 546
            | |||||  |||||  |||||||| |||||||| ||| | |||||||||||| ||| |||
Sbjct: 2038 ggtcgtagttatttaaccgtagctccgttggagatgttctatatatgtaaatcgagtaga 2097

                                                                        
Query: 547  atgacgagtagaatcacgtgaaccactttgattttccgtttaacaaacctaaaatgtgat 606
            | |||| |||||||| | ||  |||||||| ||    |||||||||||||||||||||||
Sbjct: 2098 acgacgtgtagaatctcatgctccactttgtttcgttgtttaacaaacctaaaatgtgat 2157

                                                               
Query: 607  taggacaaatctggacagaattaagttttaacacgtggggtcatttcggag 657
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2158 taggacaaatctggacagaattaagttttaacacgtggggtcatttcggag 2208
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>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 369  atatgtaacttgcctagaatttcacgtagattaataattttcaactctcat 419
            ||||| ||||||| |||||||||  ||||||||||||||| ||||| ||||
Sbjct: 9441 atatgaaacttgcttagaatttcgtgtagattaataatttgcaactttcat 9391



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 369  atatgtaacttgcctagaatttcacgtagattaataattttcaactctcat 419
            ||||| ||||||| |||||||||  ||||||||||||||| ||||| ||||
Sbjct: 1851 atatgaaacttgcttagaatttcgtgtagattaataatttgcaactttcat 1801
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>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
          Length = 124050

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                          
Query: 548   tgacgagtagaatcacgtgaaccactttgattttccgtttaacaa 592
             ||||| |||||||||||||||||  |||| ||||| |||||||||
Sbjct: 66900 tgacgcgtagaatcacgtgaacctatttgtttttctgtttaacaa 66856
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>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 546    aatgacgagtagaatcacgtgaaccactttgattttccgtttaacaa 592
              ||||||| |||||||||||||||||  |||| ||| | |||||||||
Sbjct: 104855 aatgacgcgtagaatcacgtgaacctatttgttttgctgtttaacaa 104809
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>gb|AY054379.1| Hordeum murinum clone HmuLTR-INS Sukkula retrotransposon long
            terminal repeat, complete sequence
          Length = 7586

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 527  atatatgtaaatggagcagaatgacgagtagaatc 561
            |||||||||||| ||  ||||||||||||||||||
Sbjct: 2050 atatatgtaaatcgactagaatgacgagtagaatc 2084
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>gb|AE000783.1| Borrelia burgdorferi B31, complete genome
          Length = 910724

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 605  attaggacaaatctggacagaattaagtttt 635
            |||||||||||||| | ||||||||||||||
Sbjct: 3175 attaggacaaatcttgccagaattaagtttt 3205
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>emb|AJ224476.1|BBU224476 Borrelia burgdorferi left chromosomal subtelomeric region, strain
            HB19, clone I12-D18
          Length = 8704

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 605  attaggacaaatctggacagaattaagtttt 635
            |||||||||||||| | ||||||||||||||
Sbjct: 2534 attaggacaaatcttgccagaattaagtttt 2564
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>gb|AF008218.1|AF008218 Borrelia burgdorferi Sh-2-82 left chromosomal end
          Length = 3909

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 605 attaggacaaatctggacagaattaagtttt 635
           |||||||||||||| | ||||||||||||||
Sbjct: 741 attaggacaaatcttgccagaattaagtttt 711
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>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness
            locus region
          Length = 160897

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 548  tgacgagtagaatcacgtgaaccactttgattttccgtttaacaa 592
            ||||| |||||||||||||||||  |||| ||| | |||||||||
Sbjct: 5369 tgacgcgtagaatcacgtgaacctatttgttttgctgtttaacaa 5325
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>emb|Z81584.1|CET04C12 Caenorhabditis elegans Cosmid T04C12, complete sequence
          Length = 35221

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 423  taatcagaactgtttagtttg 443
            |||||||||||||||||||||
Sbjct: 2217 taatcagaactgtttagtttg 2197
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>gb|AC018653.29| Homo sapiens 12 BAC RP11-273B20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172155

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 603   tgattaggacaaatctggaca 623
             |||||||||||||||||||||
Sbjct: 83406 tgattaggacaaatctggaca 83426
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>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 496    tatttgtccgtagcttcgttg 516
              |||||||||||||||||||||
Sbjct: 309652 tatttgtccgtagcttcgttg 309632
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>emb|CR847828.13| Zebrafish DNA sequence from clone DKEY-36I7 in linkage group 15,
             complete sequence
          Length = 107420

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 425   atcagaactgtttagtttgct 445
             |||||||||||||||||||||
Sbjct: 29500 atcagaactgtttagtttgct 29520
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>gb|AC173482.1| Mus musculus BAC clone RP23-383F20 from chromosome 14, complete sequence
          Length = 216037

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 165    tagcccacacctgtaacttag 185
              |||||||||||||||||||||
Sbjct: 159607 tagcccacacctgtaacttag 159587
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>emb|AL844597.12| Zebrafish DNA sequence from clone DKEY-9M10 in linkage group 10,
             complete sequence
          Length = 78650

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   acacatttctactcagtaga 239
             ||||||||||||||||||||
Sbjct: 75883 acacatttctactcagtaga 75902
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>gb|AC105243.5| Homo sapiens chromosome 18, clone CTD-2354A18, complete sequence
          Length = 128935

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 595   ctaaaatgtgattaggacaa 614
             ||||||||||||||||||||
Sbjct: 79478 ctaaaatgtgattaggacaa 79459
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>gb|AC051663.9|AC051663 Homo sapiens BAC clone RP11-475P15 from Y, complete sequence
          Length = 94414

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   attttcaactctcatgcata 424
             ||||||||||||||||||||
Sbjct: 76887 attttcaactctcatgcata 76906
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>gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C12 map 3p, complete sequence
          Length = 185608

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   gactagggttccaatccctg 257
             ||||||||||||||||||||
Sbjct: 72550 gactagggttccaatccctg 72569
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>emb|BX276096.4| Zebrafish DNA sequence from clone CH211-240J18 in linkage group 5,
              complete sequence
          Length = 170664

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 414    tctcatgcataatcagaact 433
              ||||||||||||||||||||
Sbjct: 130027 tctcatgcataatcagaact 130008
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>emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chromosome 13, complete
              sequence
          Length = 183340

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    ttctgcacttctgttttaaa 325
              ||||||||||||||||||||
Sbjct: 139666 ttctgcacttctgttttaaa 139647
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>emb|AL929375.5| Mouse DNA sequence from clone RP23-49G18 on chromosome 2, complete
             sequence
          Length = 54202

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ttttatttcacaagcttatt 31
             ||||||||||||||||||||
Sbjct: 13553 ttttatttcacaagcttatt 13534
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>gb|AC090947.2| Homo sapiens chromosome 3 clone RP11-30G23 map 3p, complete sequence
          Length = 166049

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   gactagggttccaatccctg 257
             ||||||||||||||||||||
Sbjct: 28295 gactagggttccaatccctg 28314
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>gb|AC018500.4| Homo sapiens chromosome 3 clone RP11-275J11 map 3p, complete sequence
          Length = 150810

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   gactagggttccaatccctg 257
             ||||||||||||||||||||
Sbjct: 10255 gactagggttccaatccctg 10236
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>gb|L31531.1|SCMPFK Schistosoma mansoni phosphofructokinase (PFK) mRNA, complete cds
          Length = 3087

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 ttttaaacgtccataacgtt 338
           ||||||||||||||||||||
Sbjct: 452 ttttaaacgtccataacgtt 433


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,421,355
Number of Sequences: 3902068
Number of extensions: 5421355
Number of successful extensions: 93097
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93003
Number of HSP's gapped (non-prelim): 90
length of query: 657
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 634
effective length of database: 17,143,297,704
effective search space: 10868850744336
effective search space used: 10868850744336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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