ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags22n12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478772.1| Oryza sativa (japonica cultivar-group), mRNA 414 e-112
2dbj|AK065242.1| Oryza sativa (japonica cultivar-group) cDNA clon... 406 e-110
3gb|AY108240.1| Zea mays PCO100302 mRNA sequence 357 2e-95
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
6emb|AJ133751.1|SOL133751 Spinacia oleracea mRNA for chloroplast ... 56 1e-04
7gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 46 0.11
8emb|AL732555.7| Mouse DNA sequence from clone RP23-124I19 on chr... 46 0.11
9ref|XM_632378.1| Dictyostelium discoideum hypothetical protein (... 44 0.45
10ref|XM_786916.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.45
11emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete g... 44 0.45
12gb|AE014133.1| Streptococcus mutans UA159, complete genome 44 0.45
13ref|XM_583735.2| PREDICTED: Bos taurus similar to transformation... 42 1.8
14ref|XM_460680.1| Debaryomyces hansenii CBS767 hypothetical prote... 42 1.8
15gb|AC103604.4| Mus musculus chromosome 3, clone RP23-95A20, comp... 42 1.8
16emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 42 1.8
17gb|AC122725.30| Medicago truncatula clone mth2-4c11, complete se... 42 1.8
18gb|AC021193.7| Homo sapiens BAC clone RP11-774G5 from 4, complet... 42 1.8
19gb|AC010260.7| Homo sapiens chromosome 5 clone CTC-458I2, comple... 42 1.8
20gb|AC105155.9| Mus musculus chromosome 3, clone RP24-346C8, comp... 42 1.8
21ref|NM_197912.1| Oryza sativa (japonica cultivar-group) putative... 40 7.0
22gb|AC153558.7| Mus musculus 10 BAC RP23-367D2 (Roswell Park Canc... 40 7.0
23gb|AC099644.6| Mus musculus chromosome 15, clone RP24-359B20, co... 40 7.0
24gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, c... 40 7.0
25gb|AC166290.7| Mus musculus BAC RP23-14P17 (Roswell Park Cancer... 40 7.0
26gb|AC133750.2| Homo sapiens 3 BAC RP11-619K22 (Roswell Park Canc... 40 7.0
27gb|AC134509.2| Homo sapiens 3 BAC RP11-427D1 (Roswell Park Cance... 40 7.0
28gb|AC160063.12| Mus musculus 10 BAC RP24-502H14 (Roswell Park Ca... 40 7.0
29emb|AL607062.10| Human DNA sequence from clone RP11-439F7 on chr... 40 7.0
30emb|AL139260.19| Human DNA sequence from clone RP5-864K19 on chr... 40 7.0
31gb|AC026877.15| Homo sapiens 3 BAC RP11-550F7 (Roswell Park Canc... 40 7.0
32ref|XM_787074.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.0
33gb|AC104518.5| Mus Musculus Strain 129S6/SvEvTac chromosome 17 B... 40 7.0
34emb|BX571658.1| Wolinella succinogenes, complete genome; segment... 40 7.0
35emb|BX323864.8| Zebrafish DNA sequence from clone CH211-218K4 in... 40 7.0
36gb|AC040978.8| Homo sapiens chromosome 8, clone RP11-570L14, com... 40 7.0
37dbj|AK097496.1| Homo sapiens cDNA FLJ40177 fis, clone TESTI2017816 40 7.0
38emb|BX511254.6| Zebrafish DNA sequence from clone DKEYP-90G2 in ... 40 7.0
39gb|AC112211.2| Homo sapiens chromosome 3 clone RP11-627J17, comp... 40 7.0
40gb|AC010863.10| Homo sapiens chromosome 10 clone RP11-346E7, com... 40 7.0
41gb|AC007518.32| Mus musculus chromosome , clone CT7-345D4, compl... 40 7.0
42ref|NM_003496.1| Homo sapiens transformation/transcription domai... 40 7.0
43gb|AC148059.3| Callicebus moloch clone LB5-40A6, complete sequence 40 7.0
44gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 gen... 40 7.0
45gb|AC159099.4| Mus musculus chromosome 15, clone RP24-132A22, co... 40 7.0
46dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
47ref|XM_623364.1| PREDICTED: Apis mellifera similar to CG11859-PA... 40 7.0
48gb|AC107033.3| Homo sapiens 12 BAC RP11-669N7 (Roswell Park Canc... 40 7.0
49dbj|AK105726.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
50dbj|AK099267.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
51dbj|AK099219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
52dbj|AK070527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
53gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, co... 40 7.0
54emb|CR936503.1| Lactobacillus sakei strain 23K complete genome 40 7.0
55gb|AY107541.1| Zea mays PCO126911 mRNA sequence 40 7.0
56gb|AF076974.1|AF076974 Homo sapiens TRRAP protein (TRRAP) mRNA, ... 40 7.0
57gb|AF110377.1|AF110377 Homo sapiens PCAF-associated factor 400 (... 40 7.0
58gb|AC153561.5| Mus musculus 10 BAC RP23-426E11 (Roswell Park Can... 40 7.0
59gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
60gb|AC145738.4| Mus musculus BAC clone RP24-293H7 from 3, complet... 40 7.0
61dbj|AB209489.1| Homo sapiens mRNA for Transformation/transcripti... 40 7.0
62gb|DP000019.1| Callicebus moloch target 1 genomic scaffold 40 7.0
63emb|AL845165.4| Mouse DNA sequence from clone RP23-281N9 on chro... 40 7.0 
>ref|XM_478772.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1227

 Score =  414 bits (209), Expect = e-112
 Identities = 350/397 (88%)
 Strand = Plus / Plus

                                                                       
Query: 106 ttcttcaacactcggacaagagagcagttttgaggcatgccactaatgaagaaattgagg 165
           |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 279 ttcttcaaaactcggacaagagagcagtattgaggcatgccactattgaagaaattgagg 338

                                                                       
Query: 166 aagaaaagacaatcgttgaagaacaagctaaagaaaagatggagaaggccattgaaacag 225
            ||||||  |  || ||||||| ||||||| ||||| |||||| ||||| ||||||||||
Sbjct: 339 cagaaaaatctgtcattgaagaccaagctagagaaaggatggaaaaggcaattgaaacag 398

                                                                       
Query: 226 ttcagtcgaacttcaataccgtgaggactgggcgggcaaacccgtctatgcttgacagga 285
           | ||    ||||||||||| |||||||| ||||||||||||||  |||||||||||||||
Sbjct: 399 tccaaaataacttcaatactgtgaggacagggcgggcaaacccagctatgcttgacagga 458

                                                                       
Query: 286 ttgaggttgagtactatggaactcctgtaaacttgaagactattgcacaagtaaatactc 345
           ||||||||||||| ||||||||||| || ||||||||||  || |||||  |||| ||||
Sbjct: 459 ttgaggttgagtattatggaactccagtgaacttgaagagcatcgcacagataaacactc 518

                                                                       
Query: 346 cagatgcgacttctcttcttatccagccatatgacaagtcttgcctcaagctcattgaga 405
           ||||||| |||||||| ||||| |||||||||||||| || | |||||||||||||||||
Sbjct: 519 cagatgcaacttctctccttattcagccatatgacaaatcctccctcaagctcattgaga 578

                                                                       
Query: 406 aagctatagttgctgcaaatattggggtaacaccaagcaatgatggagaagtgatacgag 465
           || | ||||||||||||||| | ||||| |||||||||||||||||||||||||| ||||
Sbjct: 579 aaacaatagttgctgcaaatctgggggttacaccaagcaatgatggagaagtgattcgag 638

                                                
Query: 466 tcactgtcccaccattgacatctgatcgcagaaagga 502
           ||||||| ||||||||||| ||||| |||||||||||
Sbjct: 639 tcactgttccaccattgacttctgaccgcagaaagga 675
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>dbj|AK065242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I12, full
           insert sequence
          Length = 1226

 Score =  406 bits (205), Expect = e-110
 Identities = 349/397 (87%)
 Strand = Plus / Plus

                                                                       
Query: 106 ttcttcaacactcggacaagagagcagttttgaggcatgccactaatgaagaaattgagg 165
           |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 279 ttcttcaaaactcggacaagagagcagtattgaggcatgccactattgaagaaattgagg 338

                                                                       
Query: 166 aagaaaagacaatcgttgaagaacaagctaaagaaaagatggagaaggccattgaaacag 225
            ||||||  |   | ||||||| ||||||| ||||| |||||| ||||| ||||||||||
Sbjct: 339 cagaaaaatctgacattgaagaccaagctagagaaaggatggaaaaggcaattgaaacag 398

                                                                       
Query: 226 ttcagtcgaacttcaataccgtgaggactgggcgggcaaacccgtctatgcttgacagga 285
           | ||    ||||||||||| |||||||| ||||||||||||||  |||||||||||||||
Sbjct: 399 tccaaaataacttcaatactgtgaggacagggcgggcaaacccagctatgcttgacagga 458

                                                                       
Query: 286 ttgaggttgagtactatggaactcctgtaaacttgaagactattgcacaagtaaatactc 345
           ||||||||||||| ||||||||||| || ||||||||||  || |||||  |||| ||||
Sbjct: 459 ttgaggttgagtattatggaactccagtgaacttgaagagcatcgcacagataaacactc 518

                                                                       
Query: 346 cagatgcgacttctcttcttatccagccatatgacaagtcttgcctcaagctcattgaga 405
           ||||||| |||||||| ||||| |||||||||||||| || | |||||||||||||||||
Sbjct: 519 cagatgcaacttctctccttattcagccatatgacaaatcctccctcaagctcattgaga 578

                                                                       
Query: 406 aagctatagttgctgcaaatattggggtaacaccaagcaatgatggagaagtgatacgag 465
           || | ||||||||||||||| | ||||| |||||||||||||||||||||||||| ||||
Sbjct: 579 aaacaatagttgctgcaaatctgggggttacaccaagcaatgatggagaagtgattcgag 638

                                                
Query: 466 tcactgtcccaccattgacatctgatcgcagaaagga 502
           ||||||| ||||||||||| ||||| |||||||||||
Sbjct: 639 tcactgttccaccattgacttctgaccgcagaaagga 675
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>gb|AY108240.1| Zea mays PCO100302 mRNA sequence
          Length = 776

 Score =  357 bits (180), Expect = 2e-95
 Identities = 345/400 (86%)
 Strand = Plus / Plus

                                                                       
Query: 103 tggttcttcaacactcggacaagagagcagttttgaggcatgccactaatgaagaaattg 162
           ||||||||  |||||||||||||||||||||| ||| ||||||||||| |||||||||||
Sbjct: 201 tggttcttggacactcggacaagagagcagttctgacgcatgccactattgaagaaattg 260

                                                                       
Query: 163 aggaagaaaagacaatcgttgaagaacaagctaaagaaaagatggagaaggccattgaaa 222
           | |  || ||  |  || | ||||| |||||||||||||||||||||||||| || ||||
Sbjct: 261 aagcggagaaatccctcatcgaagaccaagctaaagaaaagatggagaaggcgatcgaaa 320

                                                                       
Query: 223 cagttcagtcgaacttcaataccgtgaggactgggcgggcaaacccgtctatgcttgaca 282
           |||| ||  | |||||||| || |||||||| ||||| |||| |||| | ||||||||| 
Sbjct: 321 cagtccaaactaacttcaacactgtgaggacagggcgtgcaagcccggccatgcttgacc 380

                                                                       
Query: 283 ggattgaggttgagtactatggaactcctgtaaacttgaagactattgcacaagtaaata 342
           |||| ||||| |||||||| |||||||| || ||||||||||  ||||||||  |||  |
Sbjct: 381 ggatcgaggtcgagtactacggaactccagtgaacttgaagagcattgcacagataagca 440

                                                                       
Query: 343 ctccagatgcgacttctcttcttatccagccatatgacaagtcttgcctcaagctcattg 402
           |||||||||| |||||||||||||| || ||||||||||||||  |||||||||| || |
Sbjct: 441 ctccagatgcaacttctcttcttattcaaccatatgacaagtcaagcctcaagcttatcg 500

                                                                       
Query: 403 agaaagctatagttgctgcaaatattggggtaacaccaagcaatgatggagaagtgatac 462
           ||||| |||||||||| |||||| |||| || |||||||||||||| |||||||||||||
Sbjct: 501 agaaaactatagttgccgcaaatcttggtgtgacaccaagcaatgacggagaagtgatac 560

                                                   
Query: 463 gagtcactgtcccaccattgacatctgatcgcagaaagga 502
           |||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 gagtgactgtcccaccattgacatctgatcgcagaaagga 600
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  155 bits (78), Expect = 2e-34
 Identities = 105/114 (92%)
 Strand = Plus / Plus

                                                                            
Query: 388      gcctcaagctcattgagaaagctatagttgctgcaaatattggggtaacaccaagcaatg 447
                |||||||||||||||||||| | ||||||||||||||| | ||||| |||||||||||||
Sbjct: 22951977 gcctcaagctcattgagaaaacaatagttgctgcaaatctgggggttacaccaagcaatg 22952036

                                                                      
Query: 448      atggagaagtgatacgagtcactgtcccaccattgacatctgatcgcagaaagg 501
                ||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 22952037 atggagaagtgattcgagtcactgttccaccattgacttctgaccgcagaaagg 22952090



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                            
Query: 197      agaaaagatggagaaggccattgaaacagttcagtcgaacttcaataccgtgaggactgg 256
                ||||| |||||| ||||| ||||||||||| ||    ||||||||||| |||||||| ||
Sbjct: 22951363 agaaaggatggaaaaggcaattgaaacagtccaaaataacttcaatactgtgaggacagg 22951422

                                                    
Query: 257      gcgggcaaacccgtctatgcttgacaggattgaggt 292
                ||||||||||||  ||||||||||||||||||||||
Sbjct: 22951423 gcgggcaaacccagctatgcttgacaggattgaggt 22951458



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 82/94 (87%)
 Strand = Plus / Plus

                                                                            
Query: 289      aggttgagtactatggaactcctgtaaacttgaagactattgcacaagtaaatactccag 348
                |||||||||| ||||||||||| || ||||||||||  || |||||  |||| |||||||
Sbjct: 22951794 aggttgagtattatggaactccagtgaacttgaagagcatcgcacagataaacactccag 22951853

                                                  
Query: 349      atgcgacttctcttcttatccagccatatgacaa 382
                |||| |||||||| ||||| ||||||||||||||
Sbjct: 22951854 atgcaacttctctccttattcagccatatgacaa 22951887



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                               
Query: 126      agagcagttttgaggcatgccactaatgaagaaattgaggaagaaaa 172
                |||||||| |||||||||||||||| |||||||||||||| ||||||
Sbjct: 22951202 agagcagtattgaggcatgccactattgaagaaattgaggcagaaaa 22951248
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>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1121_A05
          Length = 172668

 Score =  155 bits (78), Expect = 2e-34
 Identities = 105/114 (92%)
 Strand = Plus / Plus

                                                                         
Query: 388   gcctcaagctcattgagaaagctatagttgctgcaaatattggggtaacaccaagcaatg 447
             |||||||||||||||||||| | ||||||||||||||| | ||||| |||||||||||||
Sbjct: 27191 gcctcaagctcattgagaaaacaatagttgctgcaaatctgggggttacaccaagcaatg 27250

                                                                   
Query: 448   atggagaagtgatacgagtcactgtcccaccattgacatctgatcgcagaaagg 501
             ||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 27251 atggagaagtgattcgagtcactgttccaccattgacttctgaccgcagaaagg 27304



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                         
Query: 197   agaaaagatggagaaggccattgaaacagttcagtcgaacttcaataccgtgaggactgg 256
             ||||| |||||| ||||| ||||||||||| ||    ||||||||||| |||||||| ||
Sbjct: 26577 agaaaggatggaaaaggcaattgaaacagtccaaaataacttcaatactgtgaggacagg 26636

                                                 
Query: 257   gcgggcaaacccgtctatgcttgacaggattgaggt 292
             ||||||||||||  ||||||||||||||||||||||
Sbjct: 26637 gcgggcaaacccagctatgcttgacaggattgaggt 26672



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 82/94 (87%)
 Strand = Plus / Plus

                                                                         
Query: 289   aggttgagtactatggaactcctgtaaacttgaagactattgcacaagtaaatactccag 348
             |||||||||| ||||||||||| || ||||||||||  || |||||  |||| |||||||
Sbjct: 27008 aggttgagtattatggaactccagtgaacttgaagagcatcgcacagataaacactccag 27067

                                               
Query: 349   atgcgacttctcttcttatccagccatatgacaa 382
             |||| |||||||| ||||| ||||||||||||||
Sbjct: 27068 atgcaacttctctccttattcagccatatgacaa 27101



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 126   agagcagttttgaggcatgccactaatgaagaaattgaggaagaaaa 172
             |||||||| |||||||||||||||| |||||||||||||| ||||||
Sbjct: 26416 agagcagtattgaggcatgccactattgaagaaattgaggcagaaaa 26462
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>emb|AJ133751.1|SOL133751 Spinacia oleracea mRNA for chloroplast ribosome recycling factor
          Length = 1109

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 283 ggattgaggttgagtactatggaactcctgtaaacttgaa 322
           |||| |||||||||||||||||||||||||| | ||||||
Sbjct: 400 ggatagaggttgagtactatggaactcctgtcagcttgaa 439
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                              
Query: 261     gcaaacccgtctatgcttgacaggattgaggttgagtactatggaac 307
               ||||||||  |||||||||| || ||||| ||||| |||||||||||
Sbjct: 1939940 gcaaacccagctatgcttgatagaattgaagttgactactatggaac 1939986
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>emb|AL732555.7| Mouse DNA sequence from clone RP23-124I19 on chromosome 4, complete
              sequence
          Length = 157653

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 177    atcgttgaagaacaagctaaaga 199
              |||||||||||||||||||||||
Sbjct: 151914 atcgttgaagaacaagctaaaga 151892
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>ref|XM_632378.1| Dictyostelium discoideum hypothetical protein (DDB0187197), partial
             mRNA
          Length = 15669

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 151   atgaagaaattgaggaagaaaa 172
             ||||||||||||||||||||||
Sbjct: 10064 atgaagaaattgaggaagaaaa 10085
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>ref|XM_786916.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7364-PA
           (LOC587169), partial mRNA
          Length = 1008

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 149 taatgaagaaattgaggaagaa 170
           ||||||||||||||||||||||
Sbjct: 745 taatgaagaaattgaggaagaa 724
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>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome
          Length = 2414465

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 189     caagctaaagaaaagatggaga 210
               ||||||||||||||||||||||
Sbjct: 1180766 caagctaaagaaaagatggaga 1180787
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>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 157     aaattgaggaagaaaagacaat 178
               ||||||||||||||||||||||
Sbjct: 1272532 aaattgaggaagaaaagacaat 1272511
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>ref|XM_583735.2| PREDICTED: Bos taurus similar to transformation/transcription
            domain-associated protein (LOC507169), mRNA
          Length = 14163

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 203  gatggagaaggccattgaaac 223
            |||||||||||||||||||||
Sbjct: 3435 gatggagaaggccattgaaac 3455
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>ref|XM_460680.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F08228g)
           partial mRNA
          Length = 3276

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 179 cgttgaagaacaagctaaagaaaag 203
           ||||||||||||| |||||||||||
Sbjct: 405 cgttgaagaacaacctaaagaaaag 429
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>gb|AC103604.4| Mus musculus chromosome 3, clone RP23-95A20, complete sequence
          Length = 170670

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 396    ctcattgagaaagctatagtt 416
              |||||||||||||||||||||
Sbjct: 162950 ctcattgagaaagctatagtt 162970
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>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
              hansenii
          Length = 2336804

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 179    cgttgaagaacaagctaaagaaaag 203
              ||||||||||||| |||||||||||
Sbjct: 656663 cgttgaagaacaacctaaagaaaag 656639
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>gb|AC122725.30| Medicago truncatula clone mth2-4c11, complete sequence
          Length = 134892

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 252   actgggcgggcaaacccgtctatgcttgacaggattgaggt 292
             |||||| | |||| |||||||||||||||||  ||||||||
Sbjct: 71046 actgggagagcaaccccgtctatgcttgacaaaattgaggt 71006
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>gb|AC021193.7| Homo sapiens BAC clone RP11-774G5 from 4, complete sequence
          Length = 217985

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 155    agaaattgaggaagaaaagac 175
              |||||||||||||||||||||
Sbjct: 165763 agaaattgaggaagaaaagac 165783
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>gb|AC010260.7| Homo sapiens chromosome 5 clone CTC-458I2, complete sequence
          Length = 150528

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 190   aagctaaagaaaagatggagaaggc 214
             ||||| |||||||||||||||||||
Sbjct: 36883 aagcttaagaaaagatggagaaggc 36859
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>gb|AC105155.9| Mus musculus chromosome 3, clone RP24-346C8, complete sequence
          Length = 162298

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 396    ctcattgagaaagctatagtt 416
              |||||||||||||||||||||
Sbjct: 134162 ctcattgagaaagctatagtt 134142
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>ref|NM_197912.1| Oryza sativa (japonica cultivar-group) putative peptide transporter
           (OSJNBa0056G17.8), mRNA
          Length = 1748

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 tgaagaacaagctaaagaaa 201
           ||||||||||||||||||||
Sbjct: 612 tgaagaacaagctaaagaaa 593
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>gb|AC153558.7| Mus musculus 10 BAC RP23-367D2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 207823

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   tgaggttgagtactatggaa 306
             ||||||||||||||||||||
Sbjct: 41538 tgaggttgagtactatggaa 41557
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>gb|AC099644.6| Mus musculus chromosome 15, clone RP24-359B20, complete sequence
          Length = 135063

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   aagaaattgaggaagaaaagacaa 177
             ||||||||||||||||||| ||||
Sbjct: 61728 aagaaattgaggaagaaaacacaa 61705
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>gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, complete sequence
          Length = 222382

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     agtctggagcagtgggtttc 89
              ||||||||||||||||||||
Sbjct: 214024 agtctggagcagtgggtttc 214005
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>gb|AC166290.7| Mus musculus  BAC RP23-14P17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 242055

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 488   tgatcgcagaaaggagatga 507
             ||||||||||||||||||||
Sbjct: 96126 tgatcgcagaaaggagatga 96145
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>gb|AC133750.2| Homo sapiens 3 BAC RP11-619K22 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 87386

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  aaagaaaagatggagaaggc 214
            ||||||||||||||||||||
Sbjct: 2123 aaagaaaagatggagaaggc 2104
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>gb|AC134509.2| Homo sapiens 3 BAC RP11-427D1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 86901

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    tgtgcctttggttcttcaac 114
             ||||||||||||||||||||
Sbjct: 57489 tgtgcctttggttcttcaac 57508
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>gb|AC160063.12| Mus musculus 10 BAC RP24-502H14 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 158603

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 392   caagctcattgagaaagcta 411
             ||||||||||||||||||||
Sbjct: 80149 caagctcattgagaaagcta 80130
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>emb|AL607062.10| Human DNA sequence from clone RP11-439F7 on chromosome 10 Contains a
             novel gene (LOC221035), complete sequence
          Length = 88210

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 494   cagaaaggagatgacaaaaa 513
             ||||||||||||||||||||
Sbjct: 68014 cagaaaggagatgacaaaaa 68033
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>emb|AL139260.19| Human DNA sequence from clone RP5-864K19 on chromosome 1p32.3-34.1
              Contains the MYCBP gene for c-myc binding protein, the
              GJA10 gene for gap junction protein alpha 10, the RHBDL2
              gene for rhomboid veinlet-like 2 (Drosophila), a novel gene
              and the RRAGC gene for Ras-related GTP binding C, complete
              sequence
          Length = 155138

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    agaaattgaggaagaaaaga 174
              ||||||||||||||||||||
Sbjct: 108379 agaaattgaggaagaaaaga 108398
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>gb|AC026877.15| Homo sapiens 3 BAC RP11-550F7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 198824

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    agaaattgaggaagaaaaga 174
              ||||||||||||||||||||
Sbjct: 192670 agaaattgaggaagaaaaga 192651
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>ref|XM_787074.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7364-PA
           (LOC587342), partial mRNA
          Length = 1014

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 151 atgaagaaattgaggaagaa 170
           ||||||||||||||||||||
Sbjct: 749 atgaagaaattgaggaagaa 730
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>gb|AC104518.5| Mus Musculus Strain 129S6/SvEvTac chromosome 17 BAC, RP22-187D17,
            Complete Sequence, complete sequence
          Length = 163367

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   agtctggagcagtgggtttc 89
            ||||||||||||||||||||
Sbjct: 2196 agtctggagcagtgggtttc 2215
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>emb|BX571658.1| Wolinella succinogenes, complete genome; segment 2/7
          Length = 346792

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   caatgatggagaagtgatac 462
             ||||||||||||||||||||
Sbjct: 85166 caatgatggagaagtgatac 85185
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>emb|BX323864.8| Zebrafish DNA sequence from clone CH211-218K4 in linkage group 17,
              complete sequence
          Length = 154824

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 490    atcgcagaaaggagatgaca 509
              ||||||||||||||||||||
Sbjct: 148331 atcgcagaaaggagatgaca 148312
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>gb|AC040978.8| Homo sapiens chromosome 8, clone RP11-570L14, complete sequence
          Length = 180983

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    aatgaagaaattgaggaaga 169
              ||||||||||||||||||||
Sbjct: 132193 aatgaagaaattgaggaaga 132174
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>dbj|AK097496.1| Homo sapiens cDNA FLJ40177 fis, clone TESTI2017816
          Length = 2223

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 194 taaagaaaagatggagaagg 213
           ||||||||||||||||||||
Sbjct: 513 taaagaaaagatggagaagg 494
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>emb|BX511254.6| Zebrafish DNA sequence from clone DKEYP-90G2 in linkage group 17,
              complete sequence
          Length = 185139

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 490    atcgcagaaaggagatgaca 509
              ||||||||||||||||||||
Sbjct: 138843 atcgcagaaaggagatgaca 138824
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>gb|AC112211.2| Homo sapiens chromosome 3 clone RP11-627J17, complete sequence
          Length = 182509

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    gcatgccactaatgaagaaa 159
              ||||||||||||||||||||
Sbjct: 113687 gcatgccactaatgaagaaa 113668
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>gb|AC010863.10| Homo sapiens chromosome 10 clone RP11-346E7, complete sequence
          Length = 186902

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 494   cagaaaggagatgacaaaaa 513
             ||||||||||||||||||||
Sbjct: 64820 cagaaaggagatgacaaaaa 64839
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>gb|AC007518.32| Mus musculus chromosome , clone CT7-345D4, complete sequence
          Length = 193714

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 488    tgatcgcagaaaggagatga 507
              ||||||||||||||||||||
Sbjct: 175452 tgatcgcagaaaggagatga 175471
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>ref|NM_003496.1| Homo sapiens transformation/transcription domain-associated protein
            (TRRAP), mRNA
          Length = 12563

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  atggagaaggccattgaaac 223
            ||||||||||||||||||||
Sbjct: 3024 atggagaaggccattgaaac 3043
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>gb|AC148059.3| Callicebus moloch clone LB5-40A6, complete sequence
          Length = 170861

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 191   agctaaagaaaagatggagaaggc 214
             |||||||||||||||| |||||||
Sbjct: 98990 agctaaagaaaagatgcagaaggc 99013
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>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete
             sequence
          Length = 139999

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   tgaagaacaagctaaagaaa 201
             ||||||||||||||||||||
Sbjct: 50334 tgaagaacaagctaaagaaa 50315
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>gb|AC159099.4| Mus musculus chromosome 15, clone RP24-132A22, complete sequence
          Length = 147359

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 154   aagaaattgaggaagaaaagacaa 177
             ||||||||||||||||||| ||||
Sbjct: 22230 aagaaattgaggaagaaaacacaa 22253
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 182      tgaagaacaagctaaagaaa 201
                ||||||||||||||||||||
Sbjct: 22595665 tgaagaacaagctaaagaaa 22595646
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>ref|XM_623364.1| PREDICTED: Apis mellifera similar to CG11859-PA (LOC550969), mRNA
          Length = 1321

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  atgaagaaattgaggaagaa 170
            ||||||||||||||||||||
Sbjct: 1011 atgaagaaattgaggaagaa 1030
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>gb|AC107033.3| Homo sapiens 12 BAC RP11-669N7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 182000

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    taaagaaaagatggagaagg 213
              ||||||||||||||||||||
Sbjct: 110816 taaagaaaagatggagaagg 110835
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>dbj|AK105726.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-G10, full
           insert sequence
          Length = 1942

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 tgaagaacaagctaaagaaa 201
           ||||||||||||||||||||
Sbjct: 669 tgaagaacaagctaaagaaa 650
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>dbj|AK099267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018P15, full
           insert sequence
          Length = 1938

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 tgaagaacaagctaaagaaa 201
           ||||||||||||||||||||
Sbjct: 659 tgaagaacaagctaaagaaa 640
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>dbj|AK099219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086I05, full
           insert sequence
          Length = 1880

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 tgaagaacaagctaaagaaa 201
           ||||||||||||||||||||
Sbjct: 677 tgaagaacaagctaaagaaa 658
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>dbj|AK070527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060H09, full
           insert sequence
          Length = 1950

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 tgaagaacaagctaaagaaa 201
           ||||||||||||||||||||
Sbjct: 677 tgaagaacaagctaaagaaa 658
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>gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, complete sequence
          Length = 165190

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    agtctggagcagtgggtttc 89
             ||||||||||||||||||||
Sbjct: 90201 agtctggagcagtgggtttc 90220
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>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 185     agaacaagctaaagaaaagatgga 208
               |||||||||||||||||| |||||
Sbjct: 1246312 agaacaagctaaagaaaacatgga 1246289
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>gb|AY107541.1| Zea mays PCO126911 mRNA sequence
          Length = 1353

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 59  catgaaaattcagtctggag 78
           ||||||||||||||||||||
Sbjct: 145 catgaaaattcagtctggag 164
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>gb|AF076974.1|AF076974 Homo sapiens TRRAP protein (TRRAP) mRNA, complete cds
          Length = 12563

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  atggagaaggccattgaaac 223
            ||||||||||||||||||||
Sbjct: 3024 atggagaaggccattgaaac 3043
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>gb|AF110377.1|AF110377 Homo sapiens PCAF-associated factor 400 (PAF400) mRNA, complete cds
          Length = 12603

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  atggagaaggccattgaaac 223
            ||||||||||||||||||||
Sbjct: 2944 atggagaaggccattgaaac 2963
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>gb|AC153561.5| Mus musculus 10 BAC RP23-426E11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 228734

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    tgaggttgagtactatggaa 306
              ||||||||||||||||||||
Sbjct: 190185 tgaggttgagtactatggaa 190204
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 182      tgaagaacaagctaaagaaa 201
                ||||||||||||||||||||
Sbjct: 22608133 tgaagaacaagctaaagaaa 22608114
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>gb|AC145738.4| Mus musculus BAC clone RP24-293H7 from 3, complete sequence
          Length = 135567

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   ttggggtaacaccaagcaat 446
             ||||||||||||||||||||
Sbjct: 22740 ttggggtaacaccaagcaat 22759
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>dbj|AB209489.1| Homo sapiens mRNA for Transformation/transcription domain-associated
            protein variant protein
          Length = 11651

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  atggagaaggccattgaaac 223
            ||||||||||||||||||||
Sbjct: 1959 atggagaaggccattgaaac 1978
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>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold
          Length = 2105003

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 191     agctaaagaaaagatggagaaggc 214
               |||||||||||||||| |||||||
Sbjct: 1836337 agctaaagaaaagatgcagaaggc 1836360
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>emb|AL845165.4| Mouse DNA sequence from clone RP23-281N9 on chromosome 2, complete
             sequence
          Length = 112789

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   caatgatggagaagtgatac 462
             ||||||||||||||||||||
Sbjct: 40047 caatgatggagaagtgatac 40066


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,910,173
Number of Sequences: 3902068
Number of extensions: 4910173
Number of successful extensions: 93090
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92814
Number of HSP's gapped (non-prelim): 271
length of query: 518
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 495
effective length of database: 17,143,297,704
effective search space: 8485932363480
effective search space used: 8485932363480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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