ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags22n10 |
|---|---|
| Clone Library Name | barley_pub |
>RS10_ORYSA (Q9AYP4) 40S ribosomal protein S10| Length = 183 Score = 176 bits (446), Expect = 6e-44 Identities = 92/153 (60%), Positives = 99/153 (64%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 259 MII KKNR EICKYLFQEGVLYAKKDYNLAKHPQ+D NL+VIK MQSFKSKEYVRETFS Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKFMQSFKSKEYVRETFS 60 Query: 260 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAKXXXXXXXXXXXXXXXXXXXXXXXX 439 WQ+YYWYLTNDGIE L +LNLPSEIVP TLKKSA+ Sbjct: 61 WQYYYWYLTNDGIEHLLNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120 Query: 440 XXXXXXXXXXXXXXXXXXXXFAGEKGGAPADYQ 538 F GEKGGAPA++Q Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQ 153
>RS10C_ARATH (Q9LTF2) 40S ribosomal protein S10-3| Length = 179 Score = 171 bits (433), Expect = 2e-42 Identities = 88/153 (57%), Positives = 101/153 (66%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 259 MIIS+ NR+EICKYLF+EGV +AKKD+NLAKHP +D NL+VIKLMQSFKSKEYVRETF+ Sbjct: 1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60 Query: 260 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAKXXXXXXXXXXXXXXXXXXXXXXXX 439 W HYYW+LTN+GIEFLRT+LNLPS++VP TLKKSAK Sbjct: 61 WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAK--PGGRPFGGPPGDRSRGPRHEGG 118 Query: 440 XXXXXXXXXXXXXXXXXXXXFAGEKGGAPADYQ 538 F GEKGGAPADYQ Sbjct: 119 DRPRFGDRDGYRAGPRAGGEFGGEKGGAPADYQ 151
>RS10A_ARATH (Q9SW09) 40S ribosomal protein S10-1| Length = 177 Score = 167 bits (424), Expect = 2e-41 Identities = 76/96 (79%), Positives = 88/96 (91%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 259 MIIS+ NRREICKYLF+EGV +AKKD+NL KHP +D NL+VIKLMQSFKSKEYVRETF+ Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60 Query: 260 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 367 W HYYW+LTN+GIEFLRT+LNLPS++VP TLKKSAK Sbjct: 61 WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAK 96
>RS10B_ARATH (Q9FFS8) 40S ribosomal protein S10-2| Length = 180 Score = 155 bits (391), Expect = 1e-37 Identities = 73/97 (75%), Positives = 87/97 (89%), Gaps = 1/97 (1%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDA-SNLEVIKLMQSFKSKEYVRETF 256 MIIS+ NRREI KYLF+EGVL+AKKD+NL +HP +++ NL+VIKLMQSFKSKEYVRETF Sbjct: 1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60 Query: 257 SWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 367 +W HYYW+LTN+GI+FLRT+LNLPSEIVP TLKK K Sbjct: 61 AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQK 97
>RS10_LUMRU (O77302) 40S ribosomal protein S10| Length = 156 Score = 125 bits (315), Expect = 9e-29 Identities = 57/96 (59%), Positives = 75/96 (78%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 259 M++SKKNR I +YLF+EGVL AKKD++L KH ++D NL VI+ MQS S+ YV+E F Sbjct: 1 MLMSKKNRVMIYEYLFKEGVLVAKKDFHLPKHGEIDVPNLHVIRAMQSLVSRGYVKEQFC 60 Query: 260 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 367 W+HYYWYL N+GI++LR FL+LP EIVP TLK+ + Sbjct: 61 WRHYYWYLQNEGIQYLRDFLHLPPEIVPATLKRQTR 96
>RS10_SPOFR (Q962R9) 40S ribosomal protein S10| Length = 158 Score = 125 bits (315), Expect = 9e-29 Identities = 58/97 (59%), Positives = 78/97 (80%), Gaps = 1/97 (1%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDA-SNLEVIKLMQSFKSKEYVRETF 256 M++ K+NR I +YLF+EGV+ AKKDY+ KHP ++ NL+VIK MQS KS+ YV+E F Sbjct: 1 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 60 Query: 257 SWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 367 +W+H+YWYLTN+GIE+LR FL+LP EIVP TLK+S + Sbjct: 61 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 97
>RS10_DICDI (O77082) 40S ribosomal protein S10| Length = 153 Score = 120 bits (300), Expect = 5e-27 Identities = 52/95 (54%), Positives = 78/95 (82%), Gaps = 1/95 (1%) Frame = +2 Query: 83 IISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDA-SNLEVIKLMQSFKSKEYVRETFS 259 +I +N+ I +YLFQEGVL A KD++LAKHPQ++ SNL+V+++++SFKS+++V ETF+ Sbjct: 2 LIPTENKLAIYRYLFQEGVLVAPKDFHLAKHPQIETVSNLDVLQILRSFKSRKFVTETFN 61 Query: 260 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSA 364 WQ+YYW LT +GI++LRT+L +P +VP T+KK A Sbjct: 62 WQYYYWVLTEEGIKYLRTYLQVPESVVPATMKKQA 96
>RS10_ICTPU (Q90YR4) 40S ribosomal protein S10| Length = 166 Score = 117 bits (293), Expect = 3e-26 Identities = 55/99 (55%), Positives = 76/99 (76%), Gaps = 3/99 (3%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQV---DASNLEVIKLMQSFKSKEYVRE 250 M++ KKNR I + LF+EGV+ AKKD +LAKHP++ + NL V+K MQS KS YV+E Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHLAKHPELADKNVPNLHVMKAMQSLKSCGYVKE 60 Query: 251 TFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 367 F+W+H+YWYLTN+GI++LR FL+LP EIVP TL++ + Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTR 99
>RS10_RAT (P63326) 40S ribosomal protein S10| Length = 165 Score = 116 bits (290), Expect = 7e-26 Identities = 53/97 (54%), Positives = 76/97 (78%), Gaps = 3/97 (3%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQV---DASNLEVIKLMQSFKSKEYVRE 250 M++ KKNR I + LF+EGV+ AKKD ++ KHP++ + NL V+K MQS KS+ YV+E Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60 Query: 251 TFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKS 361 F+W+H+YWYLTN+GI++LR +L+LP EIVP TL++S Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS 97
>RS10_MOUSE (P63325) 40S ribosomal protein S10| Length = 165 Score = 116 bits (290), Expect = 7e-26 Identities = 53/97 (54%), Positives = 76/97 (78%), Gaps = 3/97 (3%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQV---DASNLEVIKLMQSFKSKEYVRE 250 M++ KKNR I + LF+EGV+ AKKD ++ KHP++ + NL V+K MQS KS+ YV+E Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60 Query: 251 TFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKS 361 F+W+H+YWYLTN+GI++LR +L+LP EIVP TL++S Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS 97
>RS10_HUMAN (P46783) 40S ribosomal protein S10| Length = 165 Score = 116 bits (290), Expect = 7e-26 Identities = 53/97 (54%), Positives = 76/97 (78%), Gaps = 3/97 (3%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQV---DASNLEVIKLMQSFKSKEYVRE 250 M++ KKNR I + LF+EGV+ AKKD ++ KHP++ + NL V+K MQS KS+ YV+E Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60 Query: 251 TFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKS 361 F+W+H+YWYLTN+GI++LR +L+LP EIVP TL++S Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS 97
>RS10B_DROME (Q9VWG3) 40S ribosomal protein S10b| Length = 160 Score = 115 bits (289), Expect = 9e-26 Identities = 54/97 (55%), Positives = 76/97 (78%), Gaps = 1/97 (1%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDA-SNLEVIKLMQSFKSKEYVRETF 256 M + K +R I +YLF+EGV+ AKKD++ KHP++++ NL VIK MQS S+ V+E F Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60 Query: 257 SWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 367 +W+HYYWYLTN+GIE LR++L+LP EIVP+TLK+ A+ Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPAR 97
>RS10_XENLA (Q07254) 40S ribosomal protein S10| Length = 165 Score = 115 bits (288), Expect = 1e-25 Identities = 53/97 (54%), Positives = 76/97 (78%), Gaps = 3/97 (3%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQV---DASNLEVIKLMQSFKSKEYVRE 250 M++ KK+R I + LF+EGV+ AKKD ++ KHP++ + NL V+K MQS KS+ YV+E Sbjct: 1 MLMPKKDRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60 Query: 251 TFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKS 361 F+W+H+YWYLTN+GI++LR FL+LP EIVP TL++S Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRS 97
>RS10A_YEAST (Q08745) 40S ribosomal protein S10-A| Length = 105 Score = 113 bits (283), Expect = 5e-25 Identities = 51/90 (56%), Positives = 69/90 (76%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 259 M++ K++R +I +YLFQEGV+ AKKD+N AKH ++D NL VIK +QS SK YV+ FS Sbjct: 1 MLMPKEDRNKIHQYLFQEGVVVAKKDFNQAKHEEIDTKNLYVIKALQSLTSKGYVKTQFS 60 Query: 260 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNT 349 WQ+YY+ LT +G+E+LR +LNLP IVP T Sbjct: 61 WQYYYYTLTEEGVEYLREYLNLPEHIVPGT 90
>RS10B_YEAST (P46784) 40S ribosomal protein S10-B| Length = 105 Score = 113 bits (282), Expect = 6e-25 Identities = 51/90 (56%), Positives = 68/90 (75%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 259 M++ K+ R +I +YLFQEGV+ AKKD+N AKH ++D NL VIK +QS SK YV+ FS Sbjct: 1 MLMPKQERNKIHQYLFQEGVVVAKKDFNQAKHEEIDTKNLYVIKALQSLTSKGYVKTQFS 60 Query: 260 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNT 349 WQ+YY+ LT +G+E+LR +LNLP IVP T Sbjct: 61 WQYYYYTLTEEGVEYLREYLNLPEHIVPGT 90
>RS10A_DROME (Q9VB14) 40S ribosomal protein S10a| Length = 163 Score = 109 bits (273), Expect = 7e-24 Identities = 53/97 (54%), Positives = 73/97 (75%), Gaps = 1/97 (1%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDA-SNLEVIKLMQSFKSKEYVRETF 256 M I K NR I +YLF+EGVL AKKD + KH ++D NL+VIK+MQS S+ +V+E F Sbjct: 1 MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQF 60 Query: 257 SWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 367 +W+H+YW LTN+GIE LR +L+LP EIVP+TL ++ + Sbjct: 61 AWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTR 97
>RS10B_SCHPO (O13614) 40S ribosomal protein S10-B| Length = 147 Score = 107 bits (268), Expect = 2e-23 Identities = 48/96 (50%), Positives = 72/96 (75%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 259 M+I K+NR+ I + LFQ+GVL AKKD+NL KHP+V NL+VIK QS S+ Y++ ++ Sbjct: 1 MLIPKENRKAIHQALFQQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYN 60 Query: 260 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 367 W +Y+ LTN+G+E+LR +L+LP+E+VP T K+ + Sbjct: 61 WGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVR 96
>RS10A_SCHPO (O14112) 40S ribosomal protein S10-A| Length = 144 Score = 105 bits (263), Expect = 9e-23 Identities = 47/96 (48%), Positives = 71/96 (73%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVRETFS 259 M+I K+NR+ I + LF +GVL AKKD+NL KHP+V NL+VIK QS S+ Y++ ++ Sbjct: 1 MLIPKENRKAIHQALFSQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYN 60 Query: 260 WQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 367 W +Y+ LTN+G+E+LR +L+LP+E+VP T K+ + Sbjct: 61 WGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVR 96
>PLEC1_MOUSE (Q9QXS1) Plectin-1 (PLTN) (PCN) (Fragment)| Length = 964 Score = 91.7 bits (226), Expect = 2e-18 Identities = 46/95 (48%), Positives = 67/95 (70%), Gaps = 2/95 (2%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYN-LAKHPQVDA-SNLEVIKLMQSFKSKEYVRET 253 M++ R I + LF+EGV+ AKKD + HP V +NL+V++ M S K++ VRET Sbjct: 5 MLMPLDRLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLKARGLVRET 64 Query: 254 FSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKK 358 F+W H+YWYLTN+GI+ LR +L+LP EIVP +L++ Sbjct: 65 FAWCHFYWYLTNEGIDHLRQYLHLPPEIVPASLQR 99
>PLEC1_RAT (P30427) Plectin-1 (PLTN) (PCN)| Length = 4687 Score = 91.7 bits (226), Expect = 2e-18 Identities = 46/95 (48%), Positives = 67/95 (70%), Gaps = 2/95 (2%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYN-LAKHPQVDA-SNLEVIKLMQSFKSKEYVRET 253 M++ R I + LF+EGV+ AKKD + HP V +NL+V++ M S K++ VRET Sbjct: 5 MLMPLDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMTSLKARGLVRET 64 Query: 254 FSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKK 358 F+W H+YWYLTN+GI+ LR +L+LP EIVP +L++ Sbjct: 65 FAWCHFYWYLTNEGIDHLRQYLHLPPEIVPASLQR 99
>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)| Length = 4684 Score = 86.3 bits (212), Expect = 8e-17 Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 2/95 (2%) Frame = +2 Query: 80 MIISKKNRREICKYLFQEGVLYAKKDYN-LAKHPQVDA-SNLEVIKLMQSFKSKEYVRET 253 M++ + R I + LF+EGV+ AKKD + HP V +NL+V++ M S +++ VRET Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64 Query: 254 FSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKK 358 F+W H++WYLTN+GI LR +L+LP EIV +L++ Sbjct: 65 FAWCHFFWYLTNEGIAHLRQYLHLPPEIVAASLQR 99
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 39.3 bits (90), Expect = 0.011 Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 13/72 (18%) Frame = -3 Query: 608 QNRTCHRRLHGQRAWH------------HQHP*KLAGSQQELHPSHQQNHQEHHV-GLLC 468 Q++T H LH H HQHP P HQQNH HH L Sbjct: 111 QDQTPHHHLHSHPHQHQTLPPHHPYPHQHQHP----AHHPHPQPHHQQNHPHHHSHSHLH 166 Query: 467 NHPCHHT*ACHP 432 HP HH + HP Sbjct: 167 AHPAHHQTSPHP 178
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 38.5 bits (88), Expect = 0.018 Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 13/72 (18%) Frame = -3 Query: 608 QNRTCHRRLHGQRAWH------------HQHP*KLAGSQQELHPSHQQNHQEHHV-GLLC 468 Q++T H +H H HQHP P HQQNH HH L Sbjct: 266 QDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHP----AHHPHPQPHHQQNHPHHHSHSHLH 321 Query: 467 NHPCHHT*ACHP 432 HP HH + HP Sbjct: 322 AHPAHHQTSPHP 333
>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)| Length = 644 Score = 34.7 bits (78), Expect = 0.27 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = -3 Query: 635 CSFFTPWKVQNRTCHRR--LHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEH 486 C++ P+ Q++ ++ H Q A QH + +Q LH SHQQ Q+H Sbjct: 6 CNYLNPYAQQHQAQQQQHAQHQQHAQQQQHHLHMQQAQHHLHLSHQQAQQQH 57
>YJI3_YEAST (P47030) Hypothetical 68.8 kDa protein in EXO70-ARP4 intergenic| region Length = 604 Score = 32.7 bits (73), Expect = 1.0 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -3 Query: 509 HQQNHQEHHVGLLCNHPCHHT*ACHPQNEEDPWGGHR 399 H +HQ H+ H HHT + H NE+ PW HR Sbjct: 399 HHHHHQLHNPNSHHLHTHHHT-SSHKFNEDKPWKSHR 434
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 2/66 (3%) Frame = -3 Query: 593 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHHT*ACHPQN--EE 420 H H HH H L H +H +H+EHH H HH H + Sbjct: 101 HHHHHHHPPHHHHH---LGHHHHHHHAAHHHHHEEHHHHHHAAHHHHHEEHHHHHHAAHH 157 Query: 419 DPWGGH 402 PW H Sbjct: 158 HPWFHH 163 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/53 (32%), Positives = 19/53 (35%) Frame = -3 Query: 593 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHHT*ACH 435 H HG HH H G H H +H HH +H HH A H Sbjct: 228 HHHHHGHHHHHHHHH----GHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHH 276 Score = 31.6 bits (70), Expect = 2.3 Identities = 17/53 (32%), Positives = 19/53 (35%) Frame = -3 Query: 593 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHHT*ACH 435 H HG HH H G H H +H HH +H HH A H Sbjct: 218 HHHHHGHHHHHHHHH----GHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDAHH 266 Score = 31.2 bits (69), Expect = 2.9 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Frame = -3 Query: 563 HHQHP*KLAGSQQELHPSHQQNHQ-EHHVGLLCNHPCHHT*ACHPQNEE 420 HH HP HP H +H HH L +H HH A H +EE Sbjct: 94 HHHHP----------HPHHHHHHHPPHHHHHLGHHHHHHHAAHHHHHEE 132 Score = 31.2 bits (69), Expect = 2.9 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 4/67 (5%) Frame = -3 Query: 581 HGQRAWHHQHP*KLAGSQQELHPSHQQNH----QEHHVGLLCNHPCHHT*ACHPQNEEDP 414 H HH HP ++ P H+++H +EHH H HH H + P Sbjct: 56 HLHEEHHHHHP------EEHHEPHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPP 109 Query: 413 WGGHRVG 393 H +G Sbjct: 110 HHHHHLG 116 Score = 30.8 bits (68), Expect = 3.8 Identities = 18/64 (28%), Positives = 21/64 (32%) Frame = -3 Query: 593 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHHT*ACHPQNEEDP 414 H H A HH H A H +H HH G +H HH H + D Sbjct: 195 HHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDA 254 Query: 413 WGGH 402 H Sbjct: 255 HHHH 258 Score = 30.0 bits (66), Expect = 6.6 Identities = 18/64 (28%), Positives = 22/64 (34%) Frame = -3 Query: 593 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHHT*ACHPQNEEDP 414 H H A HH H + H H +H HH +H HH A H + D Sbjct: 256 HHHHHHHDAHHHHH--HHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHDA 313 Query: 413 WGGH 402 H Sbjct: 314 HHHH 317 Score = 30.0 bits (66), Expect = 6.6 Identities = 16/53 (30%), Positives = 19/53 (35%) Frame = -3 Query: 593 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHHT*ACH 435 H HG HH H + H H +H HH +H HH A H Sbjct: 238 HHHHHGHHHHHHHHH----DAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHH 286 Score = 29.6 bits (65), Expect = 8.6 Identities = 17/64 (26%), Positives = 20/64 (31%) Frame = -3 Query: 593 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHHT*ACHPQNEEDP 414 H H A HH H H +H HH G +H HH H + D Sbjct: 205 HHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDA 264 Query: 413 WGGH 402 H Sbjct: 265 HHHH 268
>CCG8_NEUCR (Q01306) Clock-controlled protein 8| Length = 661 Score = 32.3 bits (72), Expect = 1.3 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 6/43 (13%) Frame = -3 Query: 593 HRRLHGQRAWHHQHP*KLAGSQQELH------PSHQQNHQEHH 483 HR +H + H+H Q H P HQQ HQ HH Sbjct: 7 HRHMHSPSSQQHEHQQHQQYQQPPQHHQHYEAPQHQQQHQHHH 49 Score = 30.0 bits (66), Expect = 6.6 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -3 Query: 623 TPWKVQNRTCHRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHV 480 +P Q+ + + Q HHQH QQ H HQQ Q+H V Sbjct: 12 SPSSQQHEHQQHQQYQQPPQHHQHYEAPQHQQQHQHHHHQQQQQQHPV 59
>DTX_DROME (Q23985) Protein deltex| Length = 738 Score = 30.8 bits (68), Expect = 3.8 Identities = 14/44 (31%), Positives = 19/44 (43%) Frame = -3 Query: 581 HGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHH 450 H + HQH + QQ H QQ HQ+ + +H HH Sbjct: 259 HQVQQQQHQHQHQQQQQQQHHHQHQQQQHQQQQQHQMQHHQIHH 302
>GYRA_BACHD (O50628) DNA gyrase subunit A (EC 5.99.1.3)| Length = 833 Score = 30.8 bits (68), Expect = 3.8 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Frame = +2 Query: 74 FAMIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVDASNLEVIKLMQSFKSKEYVR-- 247 F + N + +G +Y K Y + + + A + +I L+Q + EY+ Sbjct: 542 FVQHLFTTNSHHTILFFTNKGKVYRLKGYEIPELGRT-AKGIPIINLLQ-IEQDEYISTI 599 Query: 248 ---ETFSWQHYYWYLTNDGI 298 E F+ HY +++T DGI Sbjct: 600 IPIEEFTEDHYLFFMTKDGI 619
>CLOCK_DROME (O61735) Circadian locomoter output cycles protein kaput (dCLOCK)| (dPAS1) Length = 1027 Score = 30.4 bits (67), Expect = 5.0 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = -3 Query: 605 NRTCHRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQ--EHHVG 477 +R HR H ++ HH + +QQ+ H HQQ Q +H VG Sbjct: 535 HREHHRENHHNQSHHHMQQQQQHQNQQQQHQQHQQLQQQLQHTVG 579
>SNIP1_HUMAN (Q8TAD8) Smad nuclear-interacting protein 1| Length = 396 Score = 30.4 bits (67), Expect = 5.0 Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 17/104 (16%) Frame = +1 Query: 106 RDLQVPLPGGSLVRQEGLQPGQAPP---------GRCLEPRGHQA---HAELQVQGV--- 240 RD V LP G +V+QE L P APP G P A H + +GV Sbjct: 17 RDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRS 76 Query: 241 --RQGDXXXXXXXXXPDQRRH*VPPHLPQPAV*DRAQHPQEVRQ 366 ++ + P +R+ P H +R HP+ R+ Sbjct: 77 PPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGRE 120
>SYTL1_HUMAN (Q8IYJ3) Synaptotagmin-like protein 1 (Exophilin-7) (JFC1 protein)| (SB146) Length = 562 Score = 30.4 bits (67), Expect = 5.0 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%) Frame = +1 Query: 136 SLVRQEGLQPGQAPPGRCLEPRGHQAHAELQVQGVRQGDXXXXXXXXXPDQR-RH*VPPH 312 S+ R++ + QAP GH AE V+ +G P +R R P Sbjct: 105 SMRRKKSTRGDQAP--------GHDREAEAAVKEKEEGPEPRLTIDEAPQERLRETEGPD 156 Query: 313 LPQPAV*DRAQHPQEVRQA 369 P P+V +A P+E QA Sbjct: 157 FPSPSVPLKASDPEEASQA 175
>SOS_DROME (P26675) Protein son of sevenless| Length = 1596 Score = 30.0 bits (66), Expect = 6.6 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -3 Query: 530 QQELHPSHQQNHQEHHVGLLCNHPCHH 450 QQ+ HP+ H +HH L +HP H Sbjct: 1515 QQQTHPAIYSQHHQHHATHLPHHPHQH 1541
>PNT1_DROME (P51022) ETS-like protein pointed, isoform P1 (D-ETS-2)| Length = 623 Score = 30.0 bits (66), Expect = 6.6 Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 2/43 (4%) Frame = -3 Query: 581 HGQRAWHHQHP*KLAGSQQELHPSH--QQNHQEHHVGLLCNHP 459 H HH HP Q LH H QQ Q+ LL HP Sbjct: 76 HHHHHHHHSHPHHQLAQQTGLHSHHTMQQQLQQQQQSLLLQHP 118
>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)| Length = 1518 Score = 29.6 bits (65), Expect = 8.6 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = -3 Query: 608 QNRTCHRRLHGQRAWHHQHP*KLAGSQQELHPS----HQQNHQEHH 483 Q + ++ H Q+ H QH QQ+LH H Q HQ HH Sbjct: 1032 QQQAAAQQQHQQQQQHQQHQ---QHQQQQLHSPLHHHHHQGHQSHH 1074
>SRY_MOUSE (Q05738) Sex-determining region Y protein (Testis-determining| factor) Length = 395 Score = 29.6 bits (65), Expect = 8.6 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Frame = -3 Query: 593 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQ--EHHVGLLCNHPCHH 450 H + Q HHQ + QQ+ H HQQ Q +HH H HH Sbjct: 158 HHQQQQQFYDHHQQQQQQQQQQQQFHDHHQQKQQFHDHHQQQQQFHDHHH 207 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,042,339 Number of Sequences: 219361 Number of extensions: 1216504 Number of successful extensions: 4917 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 4347 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4739 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
