| Clone Name | bags23c09 |
|---|---|
| Clone Library Name | barley_pub |
>NOC3L_BRARE (Q6DRN3) Nucleolar complex protein 3 homolog (NOC3 protein homolog)| (NOC3-like protein) (Nucleolar complex-associated protein 3-like protein) Length = 800 Score = 123 bits (309), Expect = 4e-28 Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 21/206 (10%) Frame = +3 Query: 105 ADELFEKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQ----TVVKLGIMSLLAVF 272 A +L EKK ++A L A+L DP NI+ L +L + +TD TV KL ++SL+ VF Sbjct: 208 AQKLMEKKL-RIAALSSAILADPHVNIKKLKELRAMLMETDPCVAVTVRKLVMVSLMEVF 266 Query: 273 RDIIPSYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKL-------------- 410 +DI+P+YRIR LTE+E A +V KE + R +E L+ YK YL++L Sbjct: 267 KDIVPAYRIRPLTEEEKAAKVKKETLQLREFEEGLVSQYKFYLEELEQTVKDWKQKKEKR 326 Query: 411 ---ISLEKQPYFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIR 581 +SL+ VAVRC+C LL A PHFN +++ +V ++ S+ ++C EA++ Sbjct: 327 SQAVSLQSYKGLAEVAVRCICELLVALPHFNFHNNIIVMLVPLMNDSDKKVSEMCCEAVK 386 Query: 582 SLFRNEGKHRGEATVEAVRLISASVK 659 L + + G+A++ V++IS VK Sbjct: 387 KLLKQD--KVGQASLAMVKVISGMVK 410
>NOC3L_CRIGR (Q91Y26) Nucleolar complex protein 3 homolog (NOC3 protein homolog)| (NOC3-like protein) (Nucleolar complex-associated protein 3-like protein) Length = 800 Score = 121 bits (303), Expect = 2e-27 Identities = 71/201 (35%), Positives = 115/201 (57%), Gaps = 21/201 (10%) Frame = +3 Query: 120 EKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQ----TVVKLGIMSLLAVFRDIIP 287 ++KK Q+A L ++L DPESNI+ L +L + + D TV KL I+SL+ +F+DI P Sbjct: 212 QEKKIQIATLASSILSDPESNIKKLKELRSMLMEQDPDVAVTVRKLVIISLMELFKDITP 271 Query: 288 SYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKL-----------------IS 416 SY+IR LTE E + ++ KE +K R +E L+ YK YL+ L +S Sbjct: 272 SYKIRPLTEAEKSTKIRKETQKLREFEEGLVSQYKFYLENLEQIVKDWKQRKLKKSNVVS 331 Query: 417 LEKQPYFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRN 596 L+ VAV+ LC LL A PHFN +++ +V ++ + + ++C EA++ LF+ Sbjct: 332 LKAYKGLAEVAVKSLCELLVALPHFNFHNNIIVLIVPLMNDGSKLVSEMCCEAVKKLFKQ 391 Query: 597 EGKHRGEATVEAVRLISASVK 659 + G+A++ +++IS VK Sbjct: 392 D--KLGQASLGVIKVISGFVK 410
>NOC3L_MOUSE (Q8VI84) Nucleolar complex protein 3 homolog (NOC3 protein homolog)| (NOC3-like protein) (Nucleolar complex-associated protein 3-like protein) (Factor for adipocyte differentiation 24) Length = 807 Score = 118 bits (296), Expect = 1e-26 Identities = 71/201 (35%), Positives = 113/201 (56%), Gaps = 21/201 (10%) Frame = +3 Query: 120 EKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQ----TVVKLGIMSLLAVFRDIIP 287 + KK Q+A L A+L DPES+I+ L +L + + D TV KL I+SL+ +F+DI P Sbjct: 211 QDKKIQIAALASAILSDPESHIKKLKELRSMLMEQDPDVAVTVRKLVIISLMELFKDITP 270 Query: 288 SYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKL-----------------IS 416 SY+IR LTE E + ++ KE +K R +E L+ YK YL+ L +S Sbjct: 271 SYKIRPLTEAEKSTKIRKETQKLREFEEGLVSQYKFYLENLEQIVKDWKQRKLKKSNVVS 330 Query: 417 LEKQPYFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRN 596 L+ VAV+ LC LL A PHFN +++ +V ++ + ++C EA++ LF+ Sbjct: 331 LKAYKGLAEVAVKSLCELLVALPHFNFHNNIIVLIVPLMNDGSKPVSEMCCEAVKKLFKQ 390 Query: 597 EGKHRGEATVEAVRLISASVK 659 + G+A++ +++IS VK Sbjct: 391 D--KLGQASLGVIKVISGFVK 409
>NOC3L_PONPY (Q5R952) Nucleolar complex protein 3 homolog (NOC3 protein homolog)| (NOC3-like protein) (Nucleolar complex-associated protein 3-like protein) Length = 800 Score = 117 bits (294), Expect = 2e-26 Identities = 71/201 (35%), Positives = 112/201 (55%), Gaps = 21/201 (10%) Frame = +3 Query: 120 EKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQ----TVVKLGIMSLLAVFRDIIP 287 ++KK +A L A+L DPESNI+ L +L + + D TV KL I+SL+ +F+DI P Sbjct: 212 QEKKMHIAALASAILSDPESNIKKLKELRSMLMEQDPDVAVTVRKLVIVSLMELFKDITP 271 Query: 288 SYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKL-----------------IS 416 SY+IR LTE E + + KE +K R +E L+ YK YL+ L +S Sbjct: 272 SYKIRPLTEAEKSTKTRKETQKLREFEEGLVSQYKFYLENLEQMVKDWKQRKLKKSNVVS 331 Query: 417 LEKQPYFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRN 596 L+ VAV+ LC LL A PHFN +++ +V ++ + ++C EA++ LF+ Sbjct: 332 LKAYKGLAEVAVKSLCELLVALPHFNFHNNIIVLIVPLMNDMSKSISEMCCEAVKKLFKQ 391 Query: 597 EGKHRGEATVEAVRLISASVK 659 + G+A++ +++IS VK Sbjct: 392 D--KLGQASLGVIKVISGFVK 410
>NOC3L_HUMAN (Q8WTT2) Nucleolar complex protein 3 homolog (NOC3 protein homolog)| (NOC3-like protein) (Nucleolar complex-associated protein 3-like protein) (Factor for adipocyte differentiation 24) Length = 800 Score = 117 bits (294), Expect = 2e-26 Identities = 70/201 (34%), Positives = 113/201 (56%), Gaps = 21/201 (10%) Frame = +3 Query: 120 EKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQ----TVVKLGIMSLLAVFRDIIP 287 ++KK +A L A+L DPE+NI+ L +L + + D TV KL I+SL+ +F+DI P Sbjct: 212 QEKKMHIAALASAILSDPENNIKKLKELRSMLMEQDPDVAVTVRKLVIVSLMELFKDITP 271 Query: 288 SYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKL-----------------IS 416 SY+IR LTE E + + KE +K R +E L+ YK YL+ L +S Sbjct: 272 SYKIRPLTEAEKSTKTRKETQKLREFEEGLVSQYKFYLENLEQMVKDWKQRKLKKSNVVS 331 Query: 417 LEKQPYFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRN 596 L+ VAV+ LC LL A PHFN +++ +V ++ + + ++C EA++ LF+ Sbjct: 332 LKAYKGLAEVAVKSLCELLVALPHFNFHNNIIVLIVPLMNDMSKLISEMCCEAVKKLFKQ 391 Query: 597 EGKHRGEATVEAVRLISASVK 659 + G+A++ +++IS VK Sbjct: 392 D--KLGQASLGVIKVISGFVK 410
>NOC3L_XENLA (Q5XGZ8) Nucleolar complex protein 3 homolog (NOC3 protein homolog)| (NOC3-like protein) (Nucleolar complex-associated protein 3-like protein) Length = 795 Score = 114 bits (286), Expect = 2e-25 Identities = 74/201 (36%), Positives = 109/201 (54%), Gaps = 21/201 (10%) Frame = +3 Query: 120 EKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQ----TVVKLGIMSLLAVFRDIIP 287 E++K+ +A L A+L +PE+NIR L +L + + D TV KL ++SL+ VF+DI P Sbjct: 210 EQRKTHIATLASAILSEPENNIRKLKELRSMLMEQDPSVAVTVRKLVMLSLMEVFKDITP 269 Query: 288 SYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKL-----------------IS 416 SY+IR LTE E A V K+ +K R +E LI YK YL+ L +S Sbjct: 270 SYKIRPLTEAEKAARVKKDTQKLREFEEGLISQYKFYLENLEQILKDWKQMKTKKSEVVS 329 Query: 417 LEKQPYFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRN 596 L +AV+CLC L+ + HFN +++ VV ++ +L EA R LFR Sbjct: 330 LHAYKGLAEIAVKCLCELMVSLSHFNFHNNIIVLVVPLVNDKCRQISELSMEATRKLFRQ 389 Query: 597 EGKHRGEATVEAVRLISASVK 659 + G A++ AV++IS VK Sbjct: 390 D--KFGHASLAAVKVISGLVK 408
>NOC3_SCHPO (O94288) Nucleolar complex-associated protein 3| Length = 747 Score = 97.1 bits (240), Expect = 4e-20 Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 11/188 (5%) Frame = +3 Query: 129 KSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQTVVKLGIMSLLAVFRDIIPSYRIRQL 308 K L +LE+P N+ + ++ + T+ KL +++LLAVFRDIIP Y+IR L Sbjct: 221 KEALGIQAQQLLEEPVENLHLIRNIFEKFDSPYITIKKLSLLTLLAVFRDIIPGYKIRPL 280 Query: 309 TEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKLISL---------EKQPYFYLVAVRCL 461 +E+E ++SKEV + YE TL++ Y +LQ L ++ E Q Y VAVRC Sbjct: 281 SEEEQGTKLSKEVAQRWEYEQTLLKHYAKFLQTLETILKSFSSTLDETQLSLYQVAVRCC 340 Query: 462 CSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRN--EGKHRGEATVEAV 635 L++ A HFN E L A VR +S ++ + I + +N E + G+ +++ V Sbjct: 341 TKLIEQASHFNLSEKLFALAVRQISHK---TKRPGFDGIINSLKNIFEEDNLGKTSLKCV 397 Query: 636 RLISASVK 659 ++S K Sbjct: 398 TILSRMFK 405
>NOC3_YEAST (Q07896) Nucleolar complex-associated protein 3| Length = 663 Score = 87.8 bits (216), Expect = 3e-17 Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%) Frame = +3 Query: 108 DELFEKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQTVVKLGIMSLLAVFRDIIP 287 +E + K +A+L ++E+PE N +L L + + K +++L+ VF+ IIP Sbjct: 131 EEKILQLKEDIADLVTKVMEEPEENTAALGRLCKMVESKNPNTCKFSMLALVPVFKSIIP 190 Query: 288 SYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKLISLEKQP--------YFYL 443 YRIR LTE E +VSKEV K R +E L+ +YK Y+ +L SL K P + Sbjct: 191 GYRIRPLTETEKKEKVSKEVSKLRNFEQALVYNYKNYVGRLQSLSKTPSNAAPIQVSLGI 250 Query: 444 VAVRCLCSLLDAAPHFNHRESLLASVVRNLSS---SNDVARKLCSEAIRSLFRNEGKHRG 614 +A + L+ A HFN R + ++R + S D + +L + G Sbjct: 251 LATQAAKELISTASHFNFRTDIFTLLLRRICKPRISTDPTSIQIIQTFETLLNED--EEG 308 Query: 615 EATVEAVRLISASVK 659 + E +R+ + +K Sbjct: 309 SISFEILRIFNKILK 323
>NOC3L_CAEEL (P91136) Nucleolar complex protein 3 homolog (NOC3 protein homolog)| (NOC3-like protein) (Nucleolar complex-associated protein 3-like protein) Length = 778 Score = 87.4 bits (215), Expect = 4e-17 Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 21/184 (11%) Frame = +3 Query: 111 ELFEKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTD------QTVVKLGIMSLLAVF 272 EL ++ K +A +L +P+ NI L DL +CN ++V KL I S L V Sbjct: 197 ELMQEFKDTIASHANMLLSNPQVNIVRLRDLYNLCNGEKIHSLVRESVQKLAIASTLQVL 256 Query: 273 RDIIPSYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQ-------KLISLEKQP 431 DI+P Y IR+ T +E A + KE + YE +L+R + YLQ KL+ ++ Sbjct: 257 LDILPGYAIREQTAEEKAQKQKKETRNLVNYEESLLRYHLKYLQLCEKLSNKLVGKDRHN 316 Query: 432 -------YFYLVAVRCLCSLLDAAPHFNHRESLLASVVR-NLSSSNDVARKLCSEAIRSL 587 +++V+ L ++ +APHFN+ ++++S+VR +L+ + V R++C EAIR++ Sbjct: 317 DESTFTFKMGILSVKALARIVVSAPHFNYSTNIVSSLVRLSLAKNETVIREVC-EAIRTV 375 Query: 588 FRNE 599 F+ + Sbjct: 376 FKED 379
>NOC3L_CAEBR (Q61LN7) Nucleolar complex protein 3 homolog (NOC3 protein homolog)| (NOC3-like protein) (Nucleolar complex-associated protein 3-like protein) Length = 779 Score = 80.5 bits (197), Expect = 4e-15 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 20/181 (11%) Frame = +3 Query: 111 ELFEKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTD------QTVVKLGIMSLLAVF 272 EL ++ K +A +L +P+ NI L DL +CN + V KL + S L V Sbjct: 199 ELLQEFKDTIASHANMLLANPQVNIVRLRDLYNLCNGEKVHSLVREPVQKLAMASTLQVL 258 Query: 273 RDIIPSYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQ-------KLISLEKQP 431 DI+P Y IR+ T +E + + KE + +E +L+R + YLQ KL+ ++ Sbjct: 259 LDIVPGYAIREQTAEEKSQKQKKETRNLVNFEESLLRYHLKYLQLCEKLSNKLVGKDRHN 318 Query: 432 -------YFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLF 590 +++V+ L ++ +APHFN+ ++++S+VR + N+ K +AIR++F Sbjct: 319 DENTFTFKMGILSVKALARIVISAPHFNYSTNIISSLVRLSLAKNETVVKEVCDAIRTVF 378 Query: 591 R 593 + Sbjct: 379 K 379
>NOC3L_DROME (Q9VI82) Nucleolar complex protein 3 homolog (NOC3 protein homolog)| (NOC3-like protein) (Nucleolar complex-associated protein 3-like protein) Length = 822 Score = 73.2 bits (178), Expect = 7e-13 Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 20/200 (10%) Frame = +3 Query: 120 EKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTD--------QTVVKLGIMSLLAVFR 275 E++K ++ + +LE PE +R+ + L + ++ + V KL I+S+ +F+ Sbjct: 232 ERQKYRIGIICSGLLEKPEDKMRNFHALYELMDEINPASRQANLMAVRKLAIISVTEIFK 291 Query: 276 DIIPSYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKLISLEKQPY------- 434 DI+P YR+ Q+ K + + + T +E L++ +K +LQKL + Q Sbjct: 292 DILPEYRVGQVDTKMQTLRKATLDRVT--FENALLQQFKKFLQKLEQITAQVNRRGGLRT 349 Query: 435 -----FYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRNE 599 VAV+C+C LL A P+FN+ +++ +V L+ + R + R++F N+ Sbjct: 350 PQTVKLATVAVQCMCDLLVAHPYFNYVQNIAQLLVYMLNCNYAEMRTAVHQCFRTVFSND 409 Query: 600 GKHRGEATVEAVRLISASVK 659 R E T+ VR I+ +K Sbjct: 410 --KRLEMTLFIVRRINHLIK 427
>YEK9_SCHPO (O36021) Hypothetical protein C4F10.09c in chromosome I| Length = 860 Score = 33.5 bits (75), Expect = 0.60 Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 12/170 (7%) Frame = +3 Query: 135 QLAELGMAMLEDPESNIRSLNDLLIICNDTDQTVVKLGIMSLLAVF-RDIIPSYRI---- 299 +++ L + + E P +++L LL IC+ + I +L +F ++P ++ Sbjct: 103 RISALTLLVQESPIHAVKALETLLSICSKKSRNEATQAITTLKDLFIGGLLPDRKLKYMK 162 Query: 300 -------RQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKLISLEKQPYFYLVAVRC 458 + +T+K L V + K+ Y++Y I ++ L+ ++ Q V Sbjct: 163 QQSCLGSKNVTDKHLMVWAFESFLKSFYFKYIQIIEALSF-DALLFVKSQ------MVST 215 Query: 459 LCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRNEGKH 608 + LL A P ++LL ++ L D K+ S+A S+ + E H Sbjct: 216 IYDLLKAKP--EQEQNLLKLLINKL---GDKENKIASKASYSILQLEASH 260
>Y260_TREPA (O83284) Hypothetical protein TP0260| Length = 448 Score = 31.6 bits (70), Expect = 2.3 Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 3/146 (2%) Frame = +3 Query: 201 LLIICNDT-DQTVVKLGIMSLLAVFRDIIPSYRIRQLTEKELAVEVSKEVKKTRYYEYTL 377 LL C +T V++ + L DI+P Y +R + VE+ K+ + +++ L Sbjct: 28 LLFSCTNTVGYGVLQWSLPDLGLSTGDILPVY-VRSNVSQVYIVEIQKKKVELPFWQLKL 86 Query: 378 IRSYKAYLQKLISLEKQPYFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVAR 557 R+ K LQ L + Y Y S+LD P E+ V R Sbjct: 87 CRTKKEALQYAERLREYRYSYAT------SVLDGLPLREGPENTAPQVYRLRE------- 133 Query: 558 KLCSEAIRSLFRNEGK--HRGEATVE 629 +A++ L++ GK +RGE +E Sbjct: 134 ---GQAVKLLWKGTGKAVYRGENRLE 156
>PYRI_CLOAB (Q97FS4) Aspartate carbamoyltransferase regulatory chain| Length = 146 Score = 31.6 bits (70), Expect = 2.3 Identities = 27/98 (27%), Positives = 45/98 (45%) Frame = +3 Query: 141 AELGMAMLEDPESNIRSLNDLLIICNDTDQTVVKLGIMSLLAVFRDIIPSYRIRQLTEKE 320 AE A++ + S D++ I N D + LG + + +II +IRQ + + Sbjct: 33 AEFPTALIMNAISKKNKAKDIIKIENVMDLDLAVLGFLDP-NITVNIIEDEKIRQKIQLK 91 Query: 321 LAVEVSKEVKKTRYYEYTLIRSYKAYLQKLISLEKQPY 434 L EV+ +K + T + SY + KL+ EK Y Sbjct: 92 LPSEVNNIIKCSNPRCVTSVESYIPHKFKLVDEEKGEY 129
>SYY_MESFL (Q6F0M8) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 413 Score = 30.4 bits (67), Expect = 5.1 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Frame = +3 Query: 195 NDLLIICNDTD--QTVVKLGIMSLLAVFRDIIPSYRIRQLTEKE-LAVEVSKEVKKTRYY 365 N LL I D V LG MSL+ RD+ + I L K+ +A +S + T + Sbjct: 102 NQLLRIIPDVTFANNVDWLGNMSLIDFLRDVGKDFNISYLLNKDSIATRISTGLSVTE-F 160 Query: 366 EYTLIRSYKAY 398 YT++++Y Y Sbjct: 161 SYTMLQAYDFY 171
>TBG_CANGA (Q6FNU9) Tubulin gamma chain (Gamma tubulin)| Length = 465 Score = 30.0 bits (66), Expect = 6.7 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%) Frame = +3 Query: 354 TRYYEYTLIRSYKAYLQKLISLEKQPYFYLVAVRCLCSLLDAAPHFNHRE--SLLASVVR 527 T Y + I +Y + K + PY ++ +R LC DA+ F++ +L A R Sbjct: 160 TDRYSKSFITTYSVFPSKQSEVVVGPYNTVLTLRRLCEDADASIIFDNNALLNLTARTFR 219 Query: 528 NLSSSNDVARKLCSEAIRSL 587 + ++S + +L S A+ S+ Sbjct: 220 DPNTSYEHTNQLISSALSSI 239
>SCC2_YEAST (Q04002) Sister chromatid cohesion protein 2| Length = 1493 Score = 29.6 bits (65), Expect = 8.7 Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 5/129 (3%) Frame = +3 Query: 216 NDTDQTVVKLGIMSLLAVFRDIIPSYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKA 395 N+ + V K ++LLA F D S+ + VS E YY +++ ++ Sbjct: 922 NEKNSIVDKQNFLNLLAKFADSTVSFLTKDHITALYPYMVSDEKSDFHYY---ILQVFRC 978 Query: 396 YLQKLISLEKQPYFYLVAVRCLCSLLDAAPHFNHRE-----SLLASVVRNLSSSNDVARK 560 +KL + KQ + Y + +LL P N RE L+ SV + + VA K Sbjct: 979 TFEKLANF-KQKFLYDLET----TLLSRLPKMNVREIDEAMPLIWSVATHRHDTARVA-K 1032 Query: 561 LCSEAIRSL 587 CS + L Sbjct: 1033 ACSSCLSHL 1041
>SKIL_PONPY (Q5R431) Ski-like protein (Ski-related protein)| Length = 684 Score = 29.6 bits (65), Expect = 8.7 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 14/85 (16%) Frame = +3 Query: 324 AVEVSKEVKKTRYYEYTLIRSYKAY----LQKLIS-----LEKQPYFYLVAVRCLCSLLD 476 AV SKE+ KT + +S KA+ LQK +S LE+Q L R LCS LD Sbjct: 418 AVSQSKELTKTEASKSISRQSEKAHSSGKLQKTVSYPDVSLEEQEKMDLKTSRELCSRLD 477 Query: 477 AAPHFN-----HRESLLASVVRNLS 536 A+ N ES ++VR+++ Sbjct: 478 ASISNNSTSKRKSESATCNLVRDIN 502
>SKIL_HUMAN (P12757) Ski-like protein (Ski-related protein) (Ski-related| oncogene) Length = 684 Score = 29.6 bits (65), Expect = 8.7 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 14/85 (16%) Frame = +3 Query: 324 AVEVSKEVKKTRYYEYTLIRSYKAY----LQKLIS-----LEKQPYFYLVAVRCLCSLLD 476 AV SKE+ KT + +S KA+ LQK +S LE+Q L R LCS LD Sbjct: 418 AVSQSKELTKTEASKSISRQSEKAHSSGKLQKTVSYPDVSLEEQEKMDLKTSRELCSRLD 477 Query: 477 AAPHFN-----HRESLLASVVRNLS 536 A+ N ES ++VR+++ Sbjct: 478 ASISNNSTSKRKSESATCNLVRDIN 502
>OPSB_ASTFA (P51472) Blue-sensitive opsin (Blue cone photoreceptor pigment)| Length = 355 Score = 29.6 bits (65), Expect = 8.7 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -2 Query: 652 LADINLTASTVASPRCFPSFLNRDLIASEHSFLATSFEELKFLTTLASKLSRW 494 LA NL STV S F SFLNR I F T+ + F+ TL +S W Sbjct: 84 LAISNLLVSTVGSFTAFVSFLNRYFI-----FGPTACKIEGFVATLGGMVSLW 131 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,229,141 Number of Sequences: 219361 Number of extensions: 1530803 Number of successful extensions: 4024 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 3936 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4009 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)