ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags23c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NOC3L_BRARE (Q6DRN3) Nucleolar complex protein 3 homolog (NOC3 p... 123 4e-28
2NOC3L_CRIGR (Q91Y26) Nucleolar complex protein 3 homolog (NOC3 p... 121 2e-27
3NOC3L_MOUSE (Q8VI84) Nucleolar complex protein 3 homolog (NOC3 p... 118 1e-26
4NOC3L_PONPY (Q5R952) Nucleolar complex protein 3 homolog (NOC3 p... 117 2e-26
5NOC3L_HUMAN (Q8WTT2) Nucleolar complex protein 3 homolog (NOC3 p... 117 2e-26
6NOC3L_XENLA (Q5XGZ8) Nucleolar complex protein 3 homolog (NOC3 p... 114 2e-25
7NOC3_SCHPO (O94288) Nucleolar complex-associated protein 3 97 4e-20
8NOC3_YEAST (Q07896) Nucleolar complex-associated protein 3 88 3e-17
9NOC3L_CAEEL (P91136) Nucleolar complex protein 3 homolog (NOC3 p... 87 4e-17
10NOC3L_CAEBR (Q61LN7) Nucleolar complex protein 3 homolog (NOC3 p... 80 4e-15
11NOC3L_DROME (Q9VI82) Nucleolar complex protein 3 homolog (NOC3 p... 73 7e-13
12YEK9_SCHPO (O36021) Hypothetical protein C4F10.09c in chromosome I 33 0.60
13Y260_TREPA (O83284) Hypothetical protein TP0260 32 2.3
14PYRI_CLOAB (Q97FS4) Aspartate carbamoyltransferase regulatory chain 32 2.3
15SYY_MESFL (Q6F0M8) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin... 30 5.1
16TBG_CANGA (Q6FNU9) Tubulin gamma chain (Gamma tubulin) 30 6.7
17SCC2_YEAST (Q04002) Sister chromatid cohesion protein 2 30 8.7
18SKIL_PONPY (Q5R431) Ski-like protein (Ski-related protein) 30 8.7
19SKIL_HUMAN (P12757) Ski-like protein (Ski-related protein) (Ski-... 30 8.7
20OPSB_ASTFA (P51472) Blue-sensitive opsin (Blue cone photorecepto... 30 8.7

>NOC3L_BRARE (Q6DRN3) Nucleolar complex protein 3 homolog (NOC3 protein homolog)|
           (NOC3-like protein) (Nucleolar complex-associated
           protein 3-like protein)
          Length = 800

 Score =  123 bits (309), Expect = 4e-28
 Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 21/206 (10%)
 Frame = +3

Query: 105 ADELFEKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQ----TVVKLGIMSLLAVF 272
           A +L EKK  ++A L  A+L DP  NI+ L +L  +  +TD     TV KL ++SL+ VF
Sbjct: 208 AQKLMEKKL-RIAALSSAILADPHVNIKKLKELRAMLMETDPCVAVTVRKLVMVSLMEVF 266

Query: 273 RDIIPSYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKL-------------- 410
           +DI+P+YRIR LTE+E A +V KE  + R +E  L+  YK YL++L              
Sbjct: 267 KDIVPAYRIRPLTEEEKAAKVKKETLQLREFEEGLVSQYKFYLEELEQTVKDWKQKKEKR 326

Query: 411 ---ISLEKQPYFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIR 581
              +SL+       VAVRC+C LL A PHFN   +++  +V  ++ S+    ++C EA++
Sbjct: 327 SQAVSLQSYKGLAEVAVRCICELLVALPHFNFHNNIIVMLVPLMNDSDKKVSEMCCEAVK 386

Query: 582 SLFRNEGKHRGEATVEAVRLISASVK 659
            L + +    G+A++  V++IS  VK
Sbjct: 387 KLLKQD--KVGQASLAMVKVISGMVK 410



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>NOC3L_CRIGR (Q91Y26) Nucleolar complex protein 3 homolog (NOC3 protein homolog)|
           (NOC3-like protein) (Nucleolar complex-associated
           protein 3-like protein)
          Length = 800

 Score =  121 bits (303), Expect = 2e-27
 Identities = 71/201 (35%), Positives = 115/201 (57%), Gaps = 21/201 (10%)
 Frame = +3

Query: 120 EKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQ----TVVKLGIMSLLAVFRDIIP 287
           ++KK Q+A L  ++L DPESNI+ L +L  +  + D     TV KL I+SL+ +F+DI P
Sbjct: 212 QEKKIQIATLASSILSDPESNIKKLKELRSMLMEQDPDVAVTVRKLVIISLMELFKDITP 271

Query: 288 SYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKL-----------------IS 416
           SY+IR LTE E + ++ KE +K R +E  L+  YK YL+ L                 +S
Sbjct: 272 SYKIRPLTEAEKSTKIRKETQKLREFEEGLVSQYKFYLENLEQIVKDWKQRKLKKSNVVS 331

Query: 417 LEKQPYFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRN 596
           L+       VAV+ LC LL A PHFN   +++  +V  ++  + +  ++C EA++ LF+ 
Sbjct: 332 LKAYKGLAEVAVKSLCELLVALPHFNFHNNIIVLIVPLMNDGSKLVSEMCCEAVKKLFKQ 391

Query: 597 EGKHRGEATVEAVRLISASVK 659
           +    G+A++  +++IS  VK
Sbjct: 392 D--KLGQASLGVIKVISGFVK 410



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>NOC3L_MOUSE (Q8VI84) Nucleolar complex protein 3 homolog (NOC3 protein homolog)|
           (NOC3-like protein) (Nucleolar complex-associated
           protein 3-like protein) (Factor for adipocyte
           differentiation 24)
          Length = 807

 Score =  118 bits (296), Expect = 1e-26
 Identities = 71/201 (35%), Positives = 113/201 (56%), Gaps = 21/201 (10%)
 Frame = +3

Query: 120 EKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQ----TVVKLGIMSLLAVFRDIIP 287
           + KK Q+A L  A+L DPES+I+ L +L  +  + D     TV KL I+SL+ +F+DI P
Sbjct: 211 QDKKIQIAALASAILSDPESHIKKLKELRSMLMEQDPDVAVTVRKLVIISLMELFKDITP 270

Query: 288 SYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKL-----------------IS 416
           SY+IR LTE E + ++ KE +K R +E  L+  YK YL+ L                 +S
Sbjct: 271 SYKIRPLTEAEKSTKIRKETQKLREFEEGLVSQYKFYLENLEQIVKDWKQRKLKKSNVVS 330

Query: 417 LEKQPYFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRN 596
           L+       VAV+ LC LL A PHFN   +++  +V  ++  +    ++C EA++ LF+ 
Sbjct: 331 LKAYKGLAEVAVKSLCELLVALPHFNFHNNIIVLIVPLMNDGSKPVSEMCCEAVKKLFKQ 390

Query: 597 EGKHRGEATVEAVRLISASVK 659
           +    G+A++  +++IS  VK
Sbjct: 391 D--KLGQASLGVIKVISGFVK 409



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>NOC3L_PONPY (Q5R952) Nucleolar complex protein 3 homolog (NOC3 protein homolog)|
           (NOC3-like protein) (Nucleolar complex-associated
           protein 3-like protein)
          Length = 800

 Score =  117 bits (294), Expect = 2e-26
 Identities = 71/201 (35%), Positives = 112/201 (55%), Gaps = 21/201 (10%)
 Frame = +3

Query: 120 EKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQ----TVVKLGIMSLLAVFRDIIP 287
           ++KK  +A L  A+L DPESNI+ L +L  +  + D     TV KL I+SL+ +F+DI P
Sbjct: 212 QEKKMHIAALASAILSDPESNIKKLKELRSMLMEQDPDVAVTVRKLVIVSLMELFKDITP 271

Query: 288 SYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKL-----------------IS 416
           SY+IR LTE E + +  KE +K R +E  L+  YK YL+ L                 +S
Sbjct: 272 SYKIRPLTEAEKSTKTRKETQKLREFEEGLVSQYKFYLENLEQMVKDWKQRKLKKSNVVS 331

Query: 417 LEKQPYFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRN 596
           L+       VAV+ LC LL A PHFN   +++  +V  ++  +    ++C EA++ LF+ 
Sbjct: 332 LKAYKGLAEVAVKSLCELLVALPHFNFHNNIIVLIVPLMNDMSKSISEMCCEAVKKLFKQ 391

Query: 597 EGKHRGEATVEAVRLISASVK 659
           +    G+A++  +++IS  VK
Sbjct: 392 D--KLGQASLGVIKVISGFVK 410



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>NOC3L_HUMAN (Q8WTT2) Nucleolar complex protein 3 homolog (NOC3 protein homolog)|
           (NOC3-like protein) (Nucleolar complex-associated
           protein 3-like protein) (Factor for adipocyte
           differentiation 24)
          Length = 800

 Score =  117 bits (294), Expect = 2e-26
 Identities = 70/201 (34%), Positives = 113/201 (56%), Gaps = 21/201 (10%)
 Frame = +3

Query: 120 EKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQ----TVVKLGIMSLLAVFRDIIP 287
           ++KK  +A L  A+L DPE+NI+ L +L  +  + D     TV KL I+SL+ +F+DI P
Sbjct: 212 QEKKMHIAALASAILSDPENNIKKLKELRSMLMEQDPDVAVTVRKLVIVSLMELFKDITP 271

Query: 288 SYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKL-----------------IS 416
           SY+IR LTE E + +  KE +K R +E  L+  YK YL+ L                 +S
Sbjct: 272 SYKIRPLTEAEKSTKTRKETQKLREFEEGLVSQYKFYLENLEQMVKDWKQRKLKKSNVVS 331

Query: 417 LEKQPYFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRN 596
           L+       VAV+ LC LL A PHFN   +++  +V  ++  + +  ++C EA++ LF+ 
Sbjct: 332 LKAYKGLAEVAVKSLCELLVALPHFNFHNNIIVLIVPLMNDMSKLISEMCCEAVKKLFKQ 391

Query: 597 EGKHRGEATVEAVRLISASVK 659
           +    G+A++  +++IS  VK
Sbjct: 392 D--KLGQASLGVIKVISGFVK 410



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>NOC3L_XENLA (Q5XGZ8) Nucleolar complex protein 3 homolog (NOC3 protein homolog)|
           (NOC3-like protein) (Nucleolar complex-associated
           protein 3-like protein)
          Length = 795

 Score =  114 bits (286), Expect = 2e-25
 Identities = 74/201 (36%), Positives = 109/201 (54%), Gaps = 21/201 (10%)
 Frame = +3

Query: 120 EKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQ----TVVKLGIMSLLAVFRDIIP 287
           E++K+ +A L  A+L +PE+NIR L +L  +  + D     TV KL ++SL+ VF+DI P
Sbjct: 210 EQRKTHIATLASAILSEPENNIRKLKELRSMLMEQDPSVAVTVRKLVMLSLMEVFKDITP 269

Query: 288 SYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKL-----------------IS 416
           SY+IR LTE E A  V K+ +K R +E  LI  YK YL+ L                 +S
Sbjct: 270 SYKIRPLTEAEKAARVKKDTQKLREFEEGLISQYKFYLENLEQILKDWKQMKTKKSEVVS 329

Query: 417 LEKQPYFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRN 596
           L        +AV+CLC L+ +  HFN   +++  VV  ++       +L  EA R LFR 
Sbjct: 330 LHAYKGLAEIAVKCLCELMVSLSHFNFHNNIIVLVVPLVNDKCRQISELSMEATRKLFRQ 389

Query: 597 EGKHRGEATVEAVRLISASVK 659
           +    G A++ AV++IS  VK
Sbjct: 390 D--KFGHASLAAVKVISGLVK 408



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>NOC3_SCHPO (O94288) Nucleolar complex-associated protein 3|
          Length = 747

 Score = 97.1 bits (240), Expect = 4e-20
 Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
 Frame = +3

Query: 129 KSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQTVVKLGIMSLLAVFRDIIPSYRIRQL 308
           K  L      +LE+P  N+  + ++    +    T+ KL +++LLAVFRDIIP Y+IR L
Sbjct: 221 KEALGIQAQQLLEEPVENLHLIRNIFEKFDSPYITIKKLSLLTLLAVFRDIIPGYKIRPL 280

Query: 309 TEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKLISL---------EKQPYFYLVAVRCL 461
           +E+E   ++SKEV +   YE TL++ Y  +LQ L ++         E Q   Y VAVRC 
Sbjct: 281 SEEEQGTKLSKEVAQRWEYEQTLLKHYAKFLQTLETILKSFSSTLDETQLSLYQVAVRCC 340

Query: 462 CSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRN--EGKHRGEATVEAV 635
             L++ A HFN  E L A  VR +S      ++   + I +  +N  E  + G+ +++ V
Sbjct: 341 TKLIEQASHFNLSEKLFALAVRQISHK---TKRPGFDGIINSLKNIFEEDNLGKTSLKCV 397

Query: 636 RLISASVK 659
            ++S   K
Sbjct: 398 TILSRMFK 405



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>NOC3_YEAST (Q07896) Nucleolar complex-associated protein 3|
          Length = 663

 Score = 87.8 bits (216), Expect = 3e-17
 Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
 Frame = +3

Query: 108 DELFEKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTDQTVVKLGIMSLLAVFRDIIP 287
           +E   + K  +A+L   ++E+PE N  +L  L  +    +    K  +++L+ VF+ IIP
Sbjct: 131 EEKILQLKEDIADLVTKVMEEPEENTAALGRLCKMVESKNPNTCKFSMLALVPVFKSIIP 190

Query: 288 SYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKLISLEKQP--------YFYL 443
            YRIR LTE E   +VSKEV K R +E  L+ +YK Y+ +L SL K P           +
Sbjct: 191 GYRIRPLTETEKKEKVSKEVSKLRNFEQALVYNYKNYVGRLQSLSKTPSNAAPIQVSLGI 250

Query: 444 VAVRCLCSLLDAAPHFNHRESLLASVVRNLSS---SNDVARKLCSEAIRSLFRNEGKHRG 614
           +A +    L+  A HFN R  +   ++R +     S D       +   +L   +    G
Sbjct: 251 LATQAAKELISTASHFNFRTDIFTLLLRRICKPRISTDPTSIQIIQTFETLLNED--EEG 308

Query: 615 EATVEAVRLISASVK 659
             + E +R+ +  +K
Sbjct: 309 SISFEILRIFNKILK 323



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>NOC3L_CAEEL (P91136) Nucleolar complex protein 3 homolog (NOC3 protein homolog)|
           (NOC3-like protein) (Nucleolar complex-associated
           protein 3-like protein)
          Length = 778

 Score = 87.4 bits (215), Expect = 4e-17
 Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 21/184 (11%)
 Frame = +3

Query: 111 ELFEKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTD------QTVVKLGIMSLLAVF 272
           EL ++ K  +A     +L +P+ NI  L DL  +CN         ++V KL I S L V 
Sbjct: 197 ELMQEFKDTIASHANMLLSNPQVNIVRLRDLYNLCNGEKIHSLVRESVQKLAIASTLQVL 256

Query: 273 RDIIPSYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQ-------KLISLEKQP 431
            DI+P Y IR+ T +E A +  KE +    YE +L+R +  YLQ       KL+  ++  
Sbjct: 257 LDILPGYAIREQTAEEKAQKQKKETRNLVNYEESLLRYHLKYLQLCEKLSNKLVGKDRHN 316

Query: 432 -------YFYLVAVRCLCSLLDAAPHFNHRESLLASVVR-NLSSSNDVARKLCSEAIRSL 587
                     +++V+ L  ++ +APHFN+  ++++S+VR +L+ +  V R++C EAIR++
Sbjct: 317 DESTFTFKMGILSVKALARIVVSAPHFNYSTNIVSSLVRLSLAKNETVIREVC-EAIRTV 375

Query: 588 FRNE 599
           F+ +
Sbjct: 376 FKED 379



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>NOC3L_CAEBR (Q61LN7) Nucleolar complex protein 3 homolog (NOC3 protein homolog)|
           (NOC3-like protein) (Nucleolar complex-associated
           protein 3-like protein)
          Length = 779

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 20/181 (11%)
 Frame = +3

Query: 111 ELFEKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTD------QTVVKLGIMSLLAVF 272
           EL ++ K  +A     +L +P+ NI  L DL  +CN         + V KL + S L V 
Sbjct: 199 ELLQEFKDTIASHANMLLANPQVNIVRLRDLYNLCNGEKVHSLVREPVQKLAMASTLQVL 258

Query: 273 RDIIPSYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQ-------KLISLEKQP 431
            DI+P Y IR+ T +E + +  KE +    +E +L+R +  YLQ       KL+  ++  
Sbjct: 259 LDIVPGYAIREQTAEEKSQKQKKETRNLVNFEESLLRYHLKYLQLCEKLSNKLVGKDRHN 318

Query: 432 -------YFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLF 590
                     +++V+ L  ++ +APHFN+  ++++S+VR   + N+   K   +AIR++F
Sbjct: 319 DENTFTFKMGILSVKALARIVISAPHFNYSTNIISSLVRLSLAKNETVVKEVCDAIRTVF 378

Query: 591 R 593
           +
Sbjct: 379 K 379



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>NOC3L_DROME (Q9VI82) Nucleolar complex protein 3 homolog (NOC3 protein homolog)|
           (NOC3-like protein) (Nucleolar complex-associated
           protein 3-like protein)
          Length = 822

 Score = 73.2 bits (178), Expect = 7e-13
 Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
 Frame = +3

Query: 120 EKKKSQLAELGMAMLEDPESNIRSLNDLLIICNDTD--------QTVVKLGIMSLLAVFR 275
           E++K ++  +   +LE PE  +R+ + L  + ++ +          V KL I+S+  +F+
Sbjct: 232 ERQKYRIGIICSGLLEKPEDKMRNFHALYELMDEINPASRQANLMAVRKLAIISVTEIFK 291

Query: 276 DIIPSYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKLISLEKQPY------- 434
           DI+P YR+ Q+  K   +  +   + T  +E  L++ +K +LQKL  +  Q         
Sbjct: 292 DILPEYRVGQVDTKMQTLRKATLDRVT--FENALLQQFKKFLQKLEQITAQVNRRGGLRT 349

Query: 435 -----FYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRNE 599
                   VAV+C+C LL A P+FN+ +++   +V  L+ +    R    +  R++F N+
Sbjct: 350 PQTVKLATVAVQCMCDLLVAHPYFNYVQNIAQLLVYMLNCNYAEMRTAVHQCFRTVFSND 409

Query: 600 GKHRGEATVEAVRLISASVK 659
              R E T+  VR I+  +K
Sbjct: 410 --KRLEMTLFIVRRINHLIK 427



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>YEK9_SCHPO (O36021) Hypothetical protein C4F10.09c in chromosome I|
          Length = 860

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
 Frame = +3

Query: 135 QLAELGMAMLEDPESNIRSLNDLLIICNDTDQTVVKLGIMSLLAVF-RDIIPSYRI---- 299
           +++ L + + E P   +++L  LL IC+   +      I +L  +F   ++P  ++    
Sbjct: 103 RISALTLLVQESPIHAVKALETLLSICSKKSRNEATQAITTLKDLFIGGLLPDRKLKYMK 162

Query: 300 -------RQLTEKELAVEVSKEVKKTRYYEYTLIRSYKAYLQKLISLEKQPYFYLVAVRC 458
                  + +T+K L V   +   K+ Y++Y  I    ++   L+ ++ Q       V  
Sbjct: 163 QQSCLGSKNVTDKHLMVWAFESFLKSFYFKYIQIIEALSF-DALLFVKSQ------MVST 215

Query: 459 LCSLLDAAPHFNHRESLLASVVRNLSSSNDVARKLCSEAIRSLFRNEGKH 608
           +  LL A P     ++LL  ++  L    D   K+ S+A  S+ + E  H
Sbjct: 216 IYDLLKAKP--EQEQNLLKLLINKL---GDKENKIASKASYSILQLEASH 260



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>Y260_TREPA (O83284) Hypothetical protein TP0260|
          Length = 448

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 3/146 (2%)
 Frame = +3

Query: 201 LLIICNDT-DQTVVKLGIMSLLAVFRDIIPSYRIRQLTEKELAVEVSKEVKKTRYYEYTL 377
           LL  C +T    V++  +  L     DI+P Y +R    +   VE+ K+  +  +++  L
Sbjct: 28  LLFSCTNTVGYGVLQWSLPDLGLSTGDILPVY-VRSNVSQVYIVEIQKKKVELPFWQLKL 86

Query: 378 IRSYKAYLQKLISLEKQPYFYLVAVRCLCSLLDAAPHFNHRESLLASVVRNLSSSNDVAR 557
            R+ K  LQ    L +  Y Y        S+LD  P     E+    V R          
Sbjct: 87  CRTKKEALQYAERLREYRYSYAT------SVLDGLPLREGPENTAPQVYRLRE------- 133

Query: 558 KLCSEAIRSLFRNEGK--HRGEATVE 629
               +A++ L++  GK  +RGE  +E
Sbjct: 134 ---GQAVKLLWKGTGKAVYRGENRLE 156



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>PYRI_CLOAB (Q97FS4) Aspartate carbamoyltransferase regulatory chain|
          Length = 146

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 27/98 (27%), Positives = 45/98 (45%)
 Frame = +3

Query: 141 AELGMAMLEDPESNIRSLNDLLIICNDTDQTVVKLGIMSLLAVFRDIIPSYRIRQLTEKE 320
           AE   A++ +  S      D++ I N  D  +  LG +    +  +II   +IRQ  + +
Sbjct: 33  AEFPTALIMNAISKKNKAKDIIKIENVMDLDLAVLGFLDP-NITVNIIEDEKIRQKIQLK 91

Query: 321 LAVEVSKEVKKTRYYEYTLIRSYKAYLQKLISLEKQPY 434
           L  EV+  +K +     T + SY  +  KL+  EK  Y
Sbjct: 92  LPSEVNNIIKCSNPRCVTSVESYIPHKFKLVDEEKGEY 129



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>SYY_MESFL (Q6F0M8) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 413

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = +3

Query: 195 NDLLIICNDTD--QTVVKLGIMSLLAVFRDIIPSYRIRQLTEKE-LAVEVSKEVKKTRYY 365
           N LL I  D      V  LG MSL+   RD+   + I  L  K+ +A  +S  +  T  +
Sbjct: 102 NQLLRIIPDVTFANNVDWLGNMSLIDFLRDVGKDFNISYLLNKDSIATRISTGLSVTE-F 160

Query: 366 EYTLIRSYKAY 398
            YT++++Y  Y
Sbjct: 161 SYTMLQAYDFY 171



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>TBG_CANGA (Q6FNU9) Tubulin gamma chain (Gamma tubulin)|
          Length = 465

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
 Frame = +3

Query: 354 TRYYEYTLIRSYKAYLQKLISLEKQPYFYLVAVRCLCSLLDAAPHFNHRE--SLLASVVR 527
           T  Y  + I +Y  +  K   +   PY  ++ +R LC   DA+  F++    +L A   R
Sbjct: 160 TDRYSKSFITTYSVFPSKQSEVVVGPYNTVLTLRRLCEDADASIIFDNNALLNLTARTFR 219

Query: 528 NLSSSNDVARKLCSEAIRSL 587
           + ++S +   +L S A+ S+
Sbjct: 220 DPNTSYEHTNQLISSALSSI 239



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>SCC2_YEAST (Q04002) Sister chromatid cohesion protein 2|
          Length = 1493

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 5/129 (3%)
 Frame = +3

Query: 216  NDTDQTVVKLGIMSLLAVFRDIIPSYRIRQLTEKELAVEVSKEVKKTRYYEYTLIRSYKA 395
            N+ +  V K   ++LLA F D   S+  +          VS E     YY   +++ ++ 
Sbjct: 922  NEKNSIVDKQNFLNLLAKFADSTVSFLTKDHITALYPYMVSDEKSDFHYY---ILQVFRC 978

Query: 396  YLQKLISLEKQPYFYLVAVRCLCSLLDAAPHFNHRE-----SLLASVVRNLSSSNDVARK 560
              +KL +  KQ + Y +      +LL   P  N RE      L+ SV  +   +  VA K
Sbjct: 979  TFEKLANF-KQKFLYDLET----TLLSRLPKMNVREIDEAMPLIWSVATHRHDTARVA-K 1032

Query: 561  LCSEAIRSL 587
             CS  +  L
Sbjct: 1033 ACSSCLSHL 1041



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>SKIL_PONPY (Q5R431) Ski-like protein (Ski-related protein)|
          Length = 684

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 14/85 (16%)
 Frame = +3

Query: 324 AVEVSKEVKKTRYYEYTLIRSYKAY----LQKLIS-----LEKQPYFYLVAVRCLCSLLD 476
           AV  SKE+ KT   +    +S KA+    LQK +S     LE+Q    L   R LCS LD
Sbjct: 418 AVSQSKELTKTEASKSISRQSEKAHSSGKLQKTVSYPDVSLEEQEKMDLKTSRELCSRLD 477

Query: 477 AAPHFN-----HRESLLASVVRNLS 536
           A+   N       ES   ++VR+++
Sbjct: 478 ASISNNSTSKRKSESATCNLVRDIN 502



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>SKIL_HUMAN (P12757) Ski-like protein (Ski-related protein) (Ski-related|
           oncogene)
          Length = 684

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 14/85 (16%)
 Frame = +3

Query: 324 AVEVSKEVKKTRYYEYTLIRSYKAY----LQKLIS-----LEKQPYFYLVAVRCLCSLLD 476
           AV  SKE+ KT   +    +S KA+    LQK +S     LE+Q    L   R LCS LD
Sbjct: 418 AVSQSKELTKTEASKSISRQSEKAHSSGKLQKTVSYPDVSLEEQEKMDLKTSRELCSRLD 477

Query: 477 AAPHFN-----HRESLLASVVRNLS 536
           A+   N       ES   ++VR+++
Sbjct: 478 ASISNNSTSKRKSESATCNLVRDIN 502



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>OPSB_ASTFA (P51472) Blue-sensitive opsin (Blue cone photoreceptor pigment)|
          Length = 355

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 22/53 (41%), Positives = 26/53 (49%)
 Frame = -2

Query: 652 LADINLTASTVASPRCFPSFLNRDLIASEHSFLATSFEELKFLTTLASKLSRW 494
           LA  NL  STV S   F SFLNR  I     F  T+ +   F+ TL   +S W
Sbjct: 84  LAISNLLVSTVGSFTAFVSFLNRYFI-----FGPTACKIEGFVATLGGMVSLW 131


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,229,141
Number of Sequences: 219361
Number of extensions: 1530803
Number of successful extensions: 4024
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4009
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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