ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags23b14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103680.1| Zea mays PCO080984 mRNA sequence 186 6e-44
2gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence 139 1e-29
3dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
4gb|AY108406.1| Zea mays PCO080983 mRNA sequence 139 1e-29
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
6gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 133 8e-28
7ref|NM_189556.2| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
8dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
9dbj|AK061691.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
11dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
12dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
13gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence 42 2.1
14gb|AC069559.27| Mus musculus strain C57BL/6J clone rp23-136j2 ma... 42 2.1
15gb|AC127357.5| Mus musculus BAC clone RP23-103P11 from chromosom... 42 2.1
16gb|AC091042.6| Homo sapiens chromosome 18, clone RP11-563H6, com... 42 2.1
17emb|CR390310.1| Gallus gallus finished cDNA, clone ChEST234p17 42 2.1
18dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
19gb|AE009707.1| Brucella melitensis 16M chromosome II, section 69... 42 2.1
20dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
21gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 42 2.1
22dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
23dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
24emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II... 42 2.1
25gb|AC069563.28| Mus musculus strain C57BL/6J chromosome 9 clone ... 42 2.1
26gb|AC101684.13| Mus musculus chromosome 1, clone RP23-187I13, co... 40 8.5
27gb|AC148114.8| Mus musculus chromosome 8, clone RP24-134B6, comp... 40 8.5
28emb|AL391316.7| Human DNA sequence from clone XX-YM901F10 on chr... 40 8.5
29emb|AL133402.10| Human DNA sequence from clone RP5-1077H22 on ch... 40 8.5
30gb|AC104574.4| Homo sapiens chromosome 15, clone RP11-259A24, co... 40 8.5
31gb|AC026118.17| Homo sapiens 3 BAC RP11-67F24 (Roswell Park Canc... 40 8.5
32gb|AC107908.3| Homo sapiens chromosome 15, clone CTD1-2291N1, co... 40 8.5
33gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, comple... 40 8.5
34gb|AC160981.2| Mus musculus BAC clone RP23-363D11 from chromosom... 40 8.5
35gb|AF303741.1|AF303741 Chilo iridescent virus complete genome 40 8.5
36dbj|AK016006.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 8.5
37dbj|AK015811.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 8.5
38gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Can... 40 8.5
39ref|NM_031749.1| Rattus norvegicus glucosidase 1 (Gcs1), mRNA 40 8.5
40gb|AF087431.1|AF087431 Rattus norvegicus glycoprotein processing... 40 8.5
41gb|AC145731.4| Mus musculus BAC clone RP24-499N24 from 9, comple... 40 8.5
42gb|AC124747.3| Mus musculus BAC clone RP23-243O9 from 12, comple... 40 8.5
43ref|NM_029061.1| Mus musculus coiled-coil domain containing 7 (C... 40 8.5
44gb|AY854152.1| Mus musculus testis-specific antigen mRNA, comple... 40 8.5 
>gb|AY103680.1| Zea mays PCO080984 mRNA sequence
          Length = 1931

 Score =  186 bits (94), Expect = 6e-44
 Identities = 196/230 (85%)
 Strand = Plus / Plus

                                                                        
Query: 125  gaccaaaagtttgatcacatagacatatcagagaagcaaaaggttgttaatgagtgctcg 184
            ||||| |||||||| ||||||||||| ||||| |||| ||||||  |||||||||| |||
Sbjct: 1255 gaccagaagtttgaacacatagacatgtcagaaaagcgaaaggtcattaatgagtgttcg 1314

                                                                        
Query: 185  gatgcagagacctggctaatggagaaaaagcagcagcaagatgctctaccgaagcatgct 244
            || |||||||| |||||||| ||||||||||||||||| |||||||| || |||||||||
Sbjct: 1315 gaagcagagacttggctaatagagaaaaagcagcagcaggatgctctgccaaagcatgct 1374

                                                                        
Query: 245  aatcctgtcctccttgtttctgacataaagaagaaggctgaagcacttgacaggttctgc 304
            ||| | || ||||||| | ||||| | |||||||| |||||| ||||||| |||||||||
Sbjct: 1375 aattcggtactccttgctgctgaccttaagaagaaagctgaaacacttgataggttctgc 1434

                                                              
Query: 305  aaacccatcatgaccaaaccaaggccagcgccaaaaccacagaccccgcc 354
            || || |||||||| ||||| | |||||| || || || ||||| |||||
Sbjct: 1435 aagccgatcatgacgaaaccgaagccagctcctaagccgcagactccgcc 1484
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>gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence
          Length = 2082

 Score =  139 bits (70), Expect = 1e-29
 Identities = 223/274 (81%)
 Strand = Plus / Plus

                                                                        
Query: 81   tggtgtactgcatccgcagttttagagaggctgcattgtctggtgaccaaaagtttgatc 140
            |||| |||||||||  |||||| ||||||||||| |||||  |||||||||||||||  |
Sbjct: 1369 tggtctactgcatcaacagtttcagagaggctgctttgtccagtgaccaaaagtttggcc 1428

                                                                        
Query: 141  acatagacatatcagagaagcaaaaggttgttaatgagtgctcggatgcagagacctggc 200
            | || |||||||| ||||| || |||||  | ||||||||||| || | ||||| |||| 
Sbjct: 1429 atatcgacatatctgagaaacagaaggtcatcaatgagtgctctgaagtagagaactggt 1488

                                                                        
Query: 201  taatggagaaaaagcagcagcaagatgctctaccgaagcatgctaatcctgtcctccttg 260
            | |  ||||  ||||||||||| || || ||||| |||||  |  ||||||| || || |
Sbjct: 1489 tgagagagaggaagcagcagcaggacgccctacctaagcacaccgatcctgtgctgctcg 1548

                                                                        
Query: 261  tttctgacataaagaagaaggctgaagcacttgacaggttctgcaaacccatcatgacca 320
            | || ||  | |||||||| ||||||||||||||||||||||||||||| |||||||| |
Sbjct: 1549 tatcagatctgaagaagaaagctgaagcacttgacaggttctgcaaaccgatcatgacta 1608

                                              
Query: 321  aaccaaggccagcgccaaaaccacagaccccgcc 354
            |||||| |||||| || || |||||||| |||||
Sbjct: 1609 aaccaaagccagctccgaagccacagactccgcc 1642
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>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full
            insert sequence
          Length = 3137

 Score =  139 bits (70), Expect = 1e-29
 Identities = 142/166 (85%)
 Strand = Plus / Plus

                                                                        
Query: 134  tttgatcacatagacatatcagagaagcaaaaggttgttaatgagtgctcggatgcagag 193
            ||||||||||| ||||| ||||| || || |||||  |  ||||||| ||||| || |||
Sbjct: 2338 tttgatcacatcgacatgtcagaaaaacagaaggtcctggatgagtgttcggaggccgag 2397

                                                                        
Query: 194  acctggctaatggagaaaaagcagcagcaagatgctctaccgaagcatgctaatcctgtc 253
            | ||||||||| |||||| |||||||||| ||||||||||| ||||||||| ||||||||
Sbjct: 2398 atctggctaatagagaaacagcagcagcaggatgctctaccaaagcatgctgatcctgtc 2457

                                                          
Query: 254  ctccttgtttctgacataaagaagaaggctgaagcacttgacaggt 299
            ||| |  | |||||||| |||||||| |||||||||||||||||||
Sbjct: 2458 ctcttaatatctgacatgaagaagaaagctgaagcacttgacaggt 2503
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>gb|AY108406.1| Zea mays PCO080983 mRNA sequence
          Length = 1289

 Score =  139 bits (70), Expect = 1e-29
 Identities = 223/274 (81%)
 Strand = Plus / Plus

                                                                       
Query: 81  tggtgtactgcatccgcagttttagagaggctgcattgtctggtgaccaaaagtttgatc 140
           |||| |||||||||  |||||| ||||||||||| |||||  |||||||||||||||  |
Sbjct: 547 tggtctactgcatcaacagtttcagagaggctgctttgtccagtgaccaaaagtttggcc 606

                                                                       
Query: 141 acatagacatatcagagaagcaaaaggttgttaatgagtgctcggatgcagagacctggc 200
           | || |||||||| ||||| || |||||  | ||||||||||| || | ||||| |||| 
Sbjct: 607 atatcgacatatctgagaaacagaaggtcatcaatgagtgctctgaagtagagaactggt 666

                                                                       
Query: 201 taatggagaaaaagcagcagcaagatgctctaccgaagcatgctaatcctgtcctccttg 260
           | |  ||||  ||||||||||| || || ||||| |||||  |  ||||||| || || |
Sbjct: 667 tgagagagaggaagcagcagcaggacgccctacctaagcacaccgatcctgtgctgctcg 726

                                                                       
Query: 261 tttctgacataaagaagaaggctgaagcacttgacaggttctgcaaacccatcatgacca 320
           | || ||  | |||||||| ||||||||||||||||||||||||||||| |||||||| |
Sbjct: 727 tatcagatctgaagaagaaagctgaagcacttgacaggttctgcaaaccgatcatgacta 786

                                             
Query: 321 aaccaaggccagcgccaaaaccacagaccccgcc 354
           |||||| |||||| || || |||||||| |||||
Sbjct: 787 aaccaaagccagctccgaagccacagactccgcc 820
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  133 bits (67), Expect = 8e-28
 Identities = 112/127 (88%)
 Strand = Plus / Plus

                                                                           
Query: 174     atgagtgctcggatgcagagacctggctaatggagaaaaagcagcagcaagatgctctac 233
               ||||||| ||||| || |||| ||||||||| |||||| |||||||||| ||||||||||
Sbjct: 4825022 atgagtgttcggaggccgagatctggctaatagagaaacagcagcagcaggatgctctac 4825081

                                                                           
Query: 234     cgaagcatgctaatcctgtcctccttgtttctgacataaagaagaaggctgaagcacttg 293
               | ||||||||| ||||||||||| |  | |||||||| |||||||| |||||||||||||
Sbjct: 4825082 caaagcatgctgatcctgtcctcttaatatctgacatgaagaagaaagctgaagcacttg 4825141

                      
Query: 294     acaggtt 300
               |||||||
Sbjct: 4825142 acaggtt 4825148
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score =  133 bits (67), Expect = 8e-28
 Identities = 112/127 (88%)
 Strand = Plus / Plus

                                                                         
Query: 174   atgagtgctcggatgcagagacctggctaatggagaaaaagcagcagcaagatgctctac 233
             ||||||| ||||| || |||| ||||||||| |||||| |||||||||| ||||||||||
Sbjct: 97430 atgagtgttcggaggccgagatctggctaatagagaaacagcagcagcaggatgctctac 97489

                                                                         
Query: 234   cgaagcatgctaatcctgtcctccttgtttctgacataaagaagaaggctgaagcacttg 293
             | ||||||||| ||||||||||| |  | |||||||| |||||||| |||||||||||||
Sbjct: 97490 caaagcatgctgatcctgtcctcttaatatctgacatgaagaagaaagctgaagcacttg 97549

                    
Query: 294   acaggtt 300
             |||||||
Sbjct: 97550 acaggtt 97556
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>ref|NM_189556.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3139

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                        
Query: 206  gagaaaaagcagcagcaagatgctctaccgaagcatgctaatcctgtcctccttgtttct 265
            |||||||  ||||||||||||||||| |||||||||||||| |||||||| ||   ||||
Sbjct: 2444 gagaaaatacagcagcaagatgctctgccgaagcatgctaaccctgtcctactctcttct 2503

                                                        
Query: 266  gacataaagaagaaggctgaagcacttgacaggttctgcaaacc 309
            ||  ||||||| ||||| ||| |  |||||||||||||||||||
Sbjct: 2504 gatttaaagaaaaaggccgaaacggttgacaggttctgcaaacc 2547
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>dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113C17, full
            insert sequence
          Length = 3139

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                        
Query: 206  gagaaaaagcagcagcaagatgctctaccgaagcatgctaatcctgtcctccttgtttct 265
            |||||||  ||||||||||||||||| |||||||||||||| |||||||| ||   ||||
Sbjct: 2444 gagaaaatacagcagcaagatgctctgccgaagcatgctaaccctgtcctactctcttct 2503

                                                        
Query: 266  gacataaagaagaaggctgaagcacttgacaggttctgcaaacc 309
            ||  ||||||| ||||| ||| |  |||||||||||||||||||
Sbjct: 2504 gatttaaagaaaaaggccgaaacggttgacaggttctgcaaacc 2547
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>dbj|AK061691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C02, full
           insert sequence
          Length = 1144

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                       
Query: 206 gagaaaaagcagcagcaagatgctctaccgaagcatgctaatcctgtcctccttgtttct 265
           |||||||  ||||||||||||||||| |||||||||||||| |||||||| ||   ||||
Sbjct: 514 gagaaaatacagcagcaagatgctctgccgaagcatgctaaccctgtcctactctcttct 573

                                                       
Query: 266 gacataaagaagaaggctgaagcacttgacaggttctgcaaacc 309
           ||  ||||||| ||||| ||| |  |||||||||||||||||||
Sbjct: 574 gatttaaagaaaaaggccgaaacggttgacaggttctgcaaacc 617
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                 
Query: 206     gagaaaaagcagcagcaagatgctctaccgaagcatgctaatcctgtcct 255
               |||||||  ||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 4257801 gagaaaatacagcagcaagatgctctgccgaagcatgctaaccctgtcct 4257850
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>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1174_D05
          Length = 128525

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 206   gagaaaaagcagcagcaagatgctctaccgaagcatgctaatcctgtcct 255
             |||||||  ||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 95768 gagaaaatacagcagcaagatgctctgccgaagcatgctaaccctgtcct 95817
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>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0666G04
          Length = 141983

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 206   gagaaaaagcagcagcaagatgctctaccgaagcatgctaatcctgtcct 255
             |||||||  ||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 37571 gagaaaatacagcagcaagatgctctgccgaagcatgctaaccctgtcct 37620
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>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 264    ctgacataaagaagaaggctg 284
              |||||||||||||||||||||
Sbjct: 530318 ctgacataaagaagaaggctg 530338
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>gb|AC069559.27| Mus musculus strain C57BL/6J clone rp23-136j2 map 9, complete sequence
          Length = 185365

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 138    atcacatagacatatcagaga 158
              |||||||||||||||||||||
Sbjct: 178311 atcacatagacatatcagaga 178291
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>gb|AC127357.5| Mus musculus BAC clone RP23-103P11 from chromosome 3, complete sequence
          Length = 220032

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 189    cagagacctggctaatggaga 209
              |||||||||||||||||||||
Sbjct: 117096 cagagacctggctaatggaga 117076
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>gb|AC091042.6| Homo sapiens chromosome 18, clone RP11-563H6, complete sequence
          Length = 149173

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 259   tgtttctgacataaagaagaa 279
             |||||||||||||||||||||
Sbjct: 89829 tgtttctgacataaagaagaa 89809
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>emb|CR390310.1| Gallus gallus finished cDNA, clone ChEST234p17
          Length = 1645

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 580 aaggaatggctgttttcatac 600
           |||||||||||||||||||||
Sbjct: 475 aaggaatggctgttttcatac 495
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 505      agaggtgtcgatctgaggaga 525
                |||||||||||||||||||||
Sbjct: 23968143 agaggtgtcgatctgaggaga 23968123



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 505     agaggtgtcgatctgaggaga 525
               |||||||||||||||||||||
Sbjct: 6273760 agaggtgtcgatctgaggaga 6273780
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>gb|AE009707.1| Brucella melitensis 16M chromosome II, section 69 of 107 of the
            complete sequence
          Length = 9807

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 264  ctgacataaagaagaaggctg 284
            |||||||||||||||||||||
Sbjct: 1391 ctgacataaagaagaaggctg 1371
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>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1267_F10
          Length = 162669

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 505   agaggtgtcgatctgaggaga 525
             |||||||||||||||||||||
Sbjct: 71147 agaggtgtcgatctgaggaga 71167
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>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence
          Length = 1162204

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 264    ctgacataaagaagaaggctg 284
              |||||||||||||||||||||
Sbjct: 683980 ctgacataaagaagaaggctg 683960
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>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1476_F05
          Length = 125426

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 505  agaggtgtcgatctgaggaga 525
            |||||||||||||||||||||
Sbjct: 3181 agaggtgtcgatctgaggaga 3161
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>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0496E03
          Length = 138622

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 505    agaggtgtcgatctgaggaga 525
              |||||||||||||||||||||
Sbjct: 102107 agaggtgtcgatctgaggaga 102087
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>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence,
              strain 2308
          Length = 1156948

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 264    ctgacataaagaagaaggctg 284
              |||||||||||||||||||||
Sbjct: 683968 ctgacataaagaagaaggctg 683948
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>gb|AC069563.28| Mus musculus strain C57BL/6J chromosome 9 clone rp23-477j18, complete
              sequence
          Length = 188584

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 138    atcacatagacatatcagaga 158
              |||||||||||||||||||||
Sbjct: 179389 atcacatagacatatcagaga 179409
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>gb|AC101684.13| Mus musculus chromosome 1, clone RP23-187I13, complete sequence
          Length = 227440

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 449    gatgagcatgtgggtgagca 468
              ||||||||||||||||||||
Sbjct: 100113 gatgagcatgtgggtgagca 100132
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>gb|AC148114.8| Mus musculus chromosome 8, clone RP24-134B6, complete sequence
          Length = 155465

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   taatggagaaaaagcagcag 220
             ||||||||||||||||||||
Sbjct: 15220 taatggagaaaaagcagcag 15201
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>emb|AL391316.7| Human DNA sequence from clone XX-YM901F10 on chromosome 20 Contains
             ESTs, GSSs and STSs, complete sequence
          Length = 49377

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   taatggagaaaaagcagcag 220
             ||||||||||||||||||||
Sbjct: 45005 taatggagaaaaagcagcag 44986
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>emb|AL133402.10| Human DNA sequence from clone RP5-1077H22 on chromosome 6 Contains part
             of a novel gene, complete sequence
          Length = 93368

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    agttttagagaggctgcatt 117
             ||||||||||||||||||||
Sbjct: 37530 agttttagagaggctgcatt 37549
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>gb|AC104574.4| Homo sapiens chromosome 15, clone RP11-259A24, complete sequence
          Length = 152130

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 257  cttgtttctgacataaagaagaaggctg 284
            ||||| ||||||| ||||||||||||||
Sbjct: 2553 cttgtatctgacacaaagaagaaggctg 2580
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>gb|AC026118.17| Homo sapiens 3 BAC RP11-67F24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 176108

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    agaaaaagcagcagcaagat 226
              ||||||||||||||||||||
Sbjct: 117439 agaaaaagcagcagcaagat 117420
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>gb|AC107908.3| Homo sapiens chromosome 15, clone CTD1-2291N1, complete sequence
          Length = 132718

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 257    cttgtttctgacataaagaagaaggctg 284
              ||||| ||||||| ||||||||||||||
Sbjct: 112339 cttgtatctgacacaaagaagaaggctg 112366
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>gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, complete sequence
          Length = 184520

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   agacctggctaatggagaaa 211
             ||||||||||||||||||||
Sbjct: 96333 agacctggctaatggagaaa 96352
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>gb|AC160981.2| Mus musculus BAC clone RP23-363D11 from chromosome 9, complete sequence
          Length = 175606

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   ctaatggagaaaaagcagca 219
             ||||||||||||||||||||
Sbjct: 56074 ctaatggagaaaaagcagca 56055
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>gb|AF303741.1|AF303741 Chilo iridescent virus complete genome
          Length = 212482

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   acaccagaagaacaatcaaa 405
             ||||||||||||||||||||
Sbjct: 76782 acaccagaagaacaatcaaa 76801
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>dbj|AK016006.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930540C21 product:hypothetical protein,
           full insert sequence
          Length = 1307

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 taatggagaaaaagcagcag 220
           ||||||||||||||||||||
Sbjct: 709 taatggagaaaaagcagcag 728
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>dbj|AK015811.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930517G15 product:hypothetical protein,
           full insert sequence
          Length = 1504

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 taatggagaaaaagcagcag 220
           ||||||||||||||||||||
Sbjct: 691 taatggagaaaaagcagcag 710
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>gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 147895

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 463    tgagcaaatggacaccgata 482
              ||||||||||||||||||||
Sbjct: 144836 tgagcaaatggacaccgata 144817
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>ref|NM_031749.1| Rattus norvegicus glucosidase 1 (Gcs1), mRNA
          Length = 2703

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 325 aaggccagcgccaaaaccac 344
           ||||||||||||||||||||
Sbjct: 165 aaggccagcgccaaaaccac 146
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>gb|AF087431.1|AF087431 Rattus norvegicus glycoprotein processing glucosidase I mRNA,
           complete cds
          Length = 2703

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 325 aaggccagcgccaaaaccac 344
           ||||||||||||||||||||
Sbjct: 165 aaggccagcgccaaaaccac 146
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>gb|AC145731.4| Mus musculus BAC clone RP24-499N24 from 9, complete sequence
          Length = 211847

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 200  ctaatggagaaaaagcagca 219
            ||||||||||||||||||||
Sbjct: 3971 ctaatggagaaaaagcagca 3990
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>gb|AC124747.3| Mus musculus BAC clone RP23-243O9 from 12, complete sequence
          Length = 208779

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   tcagagaagcaaaaggttgt 171
             ||||||||||||||||||||
Sbjct: 93987 tcagagaagcaaaaggttgt 93968
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>ref|NM_029061.1| Mus musculus coiled-coil domain containing 7 (Ccdc7), mRNA
          Length = 1504

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 taatggagaaaaagcagcag 220
           ||||||||||||||||||||
Sbjct: 691 taatggagaaaaagcagcag 710
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>gb|AY854152.1| Mus musculus testis-specific antigen mRNA, complete cds
          Length = 1554

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 taatggagaaaaagcagcag 220
           ||||||||||||||||||||
Sbjct: 741 taatggagaaaaagcagcag 760


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,904,392
Number of Sequences: 3902068
Number of extensions: 5904392
Number of successful extensions: 102109
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101904
Number of HSP's gapped (non-prelim): 205
length of query: 622
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 599
effective length of database: 17,143,297,704
effective search space: 10268835324696
effective search space used: 10268835324696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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