ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags23b09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK064851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H04, full insert sequence Length = 1674 Score = 377 bits (190), Expect = e-101 Identities = 451/538 (83%) Strand = Plus / Plus Query: 62 ctacatgataagaaaccatggcaccaggaagcaaggcagagaaaaaagcagcattggatg 121 |||||||| |||| | ||||||||| |||||||||||||||| |||||||||||| |||| Sbjct: 236 ctacatgacaagagaacatggcacctggaagcaaggcagagagaaaagcagcattagatg 295 Query: 122 ctggggcatggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggcct 181 |||| || ||||||||||| |||| || || ||||| || ||||||||||||||||||| Sbjct: 296 ctggagcttggatgttcaacattgtgacatctgttggtatcatcatggtcaacaaggcct 355 Query: 182 taatggctacacatggttttagctttgccacaacattgactgggatgcattttgcaacta 241 |||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| | Sbjct: 356 taatggctacacatggttttagttttgctacaacattgactggactgcattttgcaacca 415 Query: 242 ccactttgatgacattggtaatgaaatggttgggatacgttcagccatctcatttacctc 301 | |||||||||||||| |||||||||||| ||||||| |||| || || | ||||| Sbjct: 416 cgactttgatgacattagtaatgaaatggctgggatatattcaaccgtcctacttaccag 475 Query: 302 tgtcggagctagtaaagtttgtatttttcgcaaatctatcaattgttgggatgaatgtta 361 || | || ||| |||| ||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct: 476 tgccagaactaataaaatttgtcttttttgcaaacctatcaattgttgggatgaatgtta 535 Query: 362 gcttgatgtggaactctgttggcttttatcagattgcgaagctatctattattccacttc 421 | |||||||||||||||||||| || || |||||||| ||| ||| || |||||| || Sbjct: 536 gtttgatgtggaactctgttggattctaccagattgccaagttatgcatcattccagttt 595 Query: 422 tatgcattatggaggtcctgtttgaaaattttcgttactcgagggatacaaagcttagta 481 | ||| || |||| |||||||||| || | || ||||| || ||||||||| | |||| Sbjct: 596 tgtgctttctggaaatcctgtttgataaagtccgatactcaagagatacaaagttcagta 655 Query: 482 tagtggttgtccttgtaggtgtgggagtgtgtacagtttctgatgttagtgtaaatgcgc 541 || ||||||| || |||||||| | |||||||| || ||||||||||||| ||| | | Sbjct: 656 taatggttgttctagtaggtgttgccgtgtgtactgtgactgatgttagtgtgaattcac 715 Query: 542 aaggattggtagctgctgtaatagcagtttgcggcactgcattacaacagcattatgt 599 |||| | ||||||| ||||||| ||||| |||||||| |||||||||||||||| Sbjct: 716 aagggctcatagctgccataatagcggtttggagcactgcactacaacagcattatgt 773
>ref|XM_476174.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1008 Score = 367 bits (185), Expect = 3e-98 Identities = 437/521 (83%) Strand = Plus / Plus Query: 79 atggcaccaggaagcaaggcagagaaaaaagcagcattggatgctggggcatggatgttc 138 |||||||| |||||||||||||||| |||||||||||| |||||||| || ||||||||| Sbjct: 1 atggcacctggaagcaaggcagagagaaaagcagcattagatgctggagcttggatgttc 60 Query: 139 aatgttgtaacttcggttggcataatcatggtcaacaaggccttaatggctacacatggt 198 || |||| || || ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 61 aacattgtgacatctgttggtatcatcatggtcaacaaggccttaatggctacacatggt 120 Query: 199 tttagctttgccacaacattgactgggatgcattttgcaactaccactttgatgacattg 258 ||||| ||||| |||||||||||||| ||||||||||||| || |||||||||||||| Sbjct: 121 tttagttttgctacaacattgactggactgcattttgcaaccacgactttgatgacatta 180 Query: 259 gtaatgaaatggttgggatacgttcagccatctcatttacctctgtcggagctagtaaag 318 |||||||||||| ||||||| |||| || || | ||||| || | || ||| |||| Sbjct: 181 gtaatgaaatggctgggatatattcaaccgtcctacttaccagtgccagaactaataaaa 240 Query: 319 tttgtatttttcgcaaatctatcaattgttgggatgaatgttagcttgatgtggaactct 378 ||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 tttgtcttttttgcaaacctatcaattgttgggatgaatgttagtttgatgtggaactct 300 Query: 379 gttggcttttatcagattgcgaagctatctattattccacttctatgcattatggaggtc 438 ||||| || || |||||||| ||| ||| || |||||| || | ||| || |||| || Sbjct: 301 gttggattctaccagattgccaagttatgcatcattccagttttgtgctttctggaaatc 360 Query: 439 ctgtttgaaaattttcgttactcgagggatacaaagcttagtatagtggttgtccttgta 498 |||||||| || | || ||||| || ||||||||| | |||||| ||||||| || ||| Sbjct: 361 ctgtttgataaagtccgatactcaagagatacaaagttcagtataatggttgttctagta 420 Query: 499 ggtgtgggagtgtgtacagtttctgatgttagtgtaaatgcgcaaggattggtagctgct 558 ||||| | |||||||| || ||||||||||||| ||| | ||||| | ||||||| Sbjct: 421 ggtgttgccgtgtgtactgtgactgatgttagtgtgaattcacaagggctcatagctgcc 480 Query: 559 gtaatagcagtttgcggcactgcattacaacagcattatgt 599 ||||||| ||||| |||||||| |||||||||||||||| Sbjct: 481 ataatagcggtttggagcactgcactacaacagcattatgt 521
>ref|XM_466722.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1411 Score = 331 bits (167), Expect = 2e-87 Identities = 443/535 (82%) Strand = Plus / Plus Query: 62 ctacatgataagaaaccatggcaccaggaagcaaggcagagaaaaaagcagcattggatg 121 ||||||||||||||| |||||||||| || ||| ||||||| |||||||| |||||| Sbjct: 176 ctacatgataagaaagtatggcaccagcaaacaaagcagagagaaaagcagtgctggatg 235 Query: 122 ctggggcatggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggcct 181 |||| |||||||||||||| ||||| || || ||||| || ||||||||||||||||| | Sbjct: 236 ctggagcatggatgttcaacgttgtgacatcagttggtatcatcatggtcaacaaggcat 295 Query: 182 taatggctacacatggttttagctttgccacaacattgactgggatgcattttgcaacta 241 ||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||| | Sbjct: 296 taatggccacacatggttttagttttgctacaacattgactggattgcattttgcaacca 355 Query: 242 ccactttgatgacattggtaatgaaatggttgggatacgttcagccatctcatttacctc 301 | || ||||||||||| |||||||||||||||||| | |||||||||| ||||||| Sbjct: 356 caaccttgatgacattagtaatgaaatggttgggacatattcagccatcctatttaccat 415 Query: 302 tgtcggagctagtaaagtttgtatttttcgcaaatctatcaattgttgggatgaatgtta 361 || | || || || || || || ||||| ||||| |||||||||||||||||||||||| Sbjct: 416 tgccagaactcgttaaattcgtcttttttgcaaacttatcaattgttgggatgaatgtta 475 Query: 362 gcttgatgtggaactctgttggcttttatcagattgcgaagctatctattattccacttc 421 | |||||||||||||||||||| || ||||||||||| ||| | | |||||||||| | Sbjct: 476 gtttgatgtggaactctgttggattctatcagattgccaagttgtgtattattccagtct 535 Query: 422 tatgcattatggaggtcctgtttgaaaattttcgttactcgagggatacaaagcttagta 481 | |||||| |||| |||||||||| || | |||||||| ||| ||||||| || |||| Sbjct: 536 tgtgcattctggaaatcctgtttgacaaagtccgttactcaaggaatacaaaactcagta 595 Query: 482 tagtggttgtccttgtaggtgtgggagtgtgtacagtttctgatgttagtgtaaatgcgc 541 ||||| |||| | ||||| || | || ||||| || ||||||||||||| ||| | Sbjct: 596 tagtgcttgttttagtaggagttgctgtatgtactgtgactgatgttagtgtgaattcaa 655 Query: 542 aaggattggtagctgctgtaatagcagtttgcggcactgcattacaacagcatta 596 |||| || |||| |||||||| |||||||| |||| ||| |||| |||||||| Sbjct: 656 aagggctgctagcagctgtaattgcagtttggagcacagcactacagcagcatta 710
>gb|AY030360.1| Oryza sativa putative transmembrane protein mRNA, complete cds Length = 1330 Score = 331 bits (167), Expect = 2e-87 Identities = 443/535 (82%) Strand = Plus / Plus Query: 62 ctacatgataagaaaccatggcaccaggaagcaaggcagagaaaaaagcagcattggatg 121 ||||||||||||||| |||||||||| |||||| ||||||| |||||||| |||||| Sbjct: 68 ctacatgataagaaagtatggcaccagcaagcaaagcagagagaaaagcagtgctggatg 127 Query: 122 ctggggcatggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggcct 181 |||| |||||||||||||| ||||| || || ||||| || ||||||||||||||||| | Sbjct: 128 ctggagcatggatgttcaacgttgtgacatcagttggtatcatcatggtcaacaaggcat 187 Query: 182 taatggctacacatggttttagctttgccacaacattgactgggatgcattttgcaacta 241 ||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||| | Sbjct: 188 taatggccacacatggttttagttttgctacaacattgactggattgcattttgcaacca 247 Query: 242 ccactttgatgacattggtaatgaaatggttgggatacgttcagccatctcatttacctc 301 | || ||||||||||| |||||||||||||||||| | |||||||||| ||||||| Sbjct: 248 caaccttgatgacattagtaatgaaatggttgggacatattcagccatcctatttaccat 307 Query: 302 tgtcggagctagtaaagtttgtatttttcgcaaatctatcaattgttgggatgaatgtta 361 || | || || || || || || ||||| ||||| |||||||||||||||||||||||| Sbjct: 308 tgccagaactcgttaaattcgtcttttttgcaaacttatcaattgttgggatgaatgtta 367 Query: 362 gcttgatgtggaactctgttggcttttatcagattgcgaagctatctattattccacttc 421 | |||||||||||||||||||| || ||||||||||| ||| | | |||||||||| | Sbjct: 368 gtttgatgtggaactctgttggattctatcagattgccaagttgtgtattattccagtct 427 Query: 422 tatgcattatggaggtcctgtttgaaaattttcgttactcgagggatacaaagcttagta 481 | |||||| |||| |||||||||| || | |||||||| ||| ||||||| || |||| Sbjct: 428 tgtgcattctggaaatcctgtttgacaaagtccgttactcaaggaatacaaaactcagta 487 Query: 482 tagtggttgtccttgtaggtgtgggagtgtgtacagtttctgatgttagtgtaaatgcgc 541 ||||| |||| | ||||| || | || ||||| || ||||||||||||| ||| | Sbjct: 488 tagtgcttgttttagtaggagttgctgtatgtactgtgactgatgttagtgtgaattcaa 547 Query: 542 aaggattggtagctgctgtaatagcagtttgcggcactgcattacaacagcatta 596 ||| || |||| |||||||| |||||||| |||| ||| |||| |||||||| Sbjct: 548 gagggctgctagcagctgtaattgcagtttggagcacagcactacagcagcatta 602
>dbj|AK072518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130L12, full insert sequence Length = 1412 Score = 331 bits (167), Expect = 2e-87 Identities = 443/535 (82%) Strand = Plus / Plus Query: 62 ctacatgataagaaaccatggcaccaggaagcaaggcagagaaaaaagcagcattggatg 121 ||||||||||||||| |||||||||| || ||| ||||||| |||||||| |||||| Sbjct: 177 ctacatgataagaaagtatggcaccagcaaacaaagcagagagaaaagcagtgctggatg 236 Query: 122 ctggggcatggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggcct 181 |||| |||||||||||||| ||||| || || ||||| || ||||||||||||||||| | Sbjct: 237 ctggagcatggatgttcaacgttgtgacatcagttggtatcatcatggtcaacaaggcat 296 Query: 182 taatggctacacatggttttagctttgccacaacattgactgggatgcattttgcaacta 241 ||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||| | Sbjct: 297 taatggccacacatggttttagttttgctacaacattgactggattgcattttgcaacca 356 Query: 242 ccactttgatgacattggtaatgaaatggttgggatacgttcagccatctcatttacctc 301 | || ||||||||||| |||||||||||||||||| | |||||||||| ||||||| Sbjct: 357 caaccttgatgacattagtaatgaaatggttgggacatattcagccatcctatttaccat 416 Query: 302 tgtcggagctagtaaagtttgtatttttcgcaaatctatcaattgttgggatgaatgtta 361 || | || || || || || || ||||| ||||| |||||||||||||||||||||||| Sbjct: 417 tgccagaactcgttaaattcgtcttttttgcaaacttatcaattgttgggatgaatgtta 476 Query: 362 gcttgatgtggaactctgttggcttttatcagattgcgaagctatctattattccacttc 421 | |||||||||||||||||||| || ||||||||||| ||| | | |||||||||| | Sbjct: 477 gtttgatgtggaactctgttggattctatcagattgccaagttgtgtattattccagtct 536 Query: 422 tatgcattatggaggtcctgtttgaaaattttcgttactcgagggatacaaagcttagta 481 | |||||| |||| |||||||||| || | |||||||| ||| ||||||| || |||| Sbjct: 537 tgtgcattctggaaatcctgtttgacaaagtccgttactcaaggaatacaaaactcagta 596 Query: 482 tagtggttgtccttgtaggtgtgggagtgtgtacagtttctgatgttagtgtaaatgcgc 541 ||||| |||| | ||||| || | || ||||| || ||||||||||||| ||| | Sbjct: 597 tagtgcttgttttagtaggagttgctgtatgtactgtgactgatgttagtgtgaattcaa 656 Query: 542 aaggattggtagctgctgtaatagcagtttgcggcactgcattacaacagcatta 596 |||| || |||| |||||||| |||||||| |||| ||| |||| |||||||| Sbjct: 657 aagggctgctagcagctgtaattgcagtttggagcacagcactacagcagcatta 711
>gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1076_H08, complete sequence Length = 148348 Score = 165 bits (83), Expect = 2e-37 Identities = 131/147 (89%) Strand = Plus / Minus Query: 62 ctacatgataagaaaccatggcaccaggaagcaaggcagagaaaaaagcagcattggatg 121 |||||||| |||| | ||||||||| |||||||||||||||| |||||||||||| |||| Sbjct: 44454 ctacatgacaagagaacatggcacctggaagcaaggcagagagaaaagcagcattagatg 44395 Query: 122 ctggggcatggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggcct 181 |||| || ||||||||||| |||| || || ||||| || ||||||||||||||||||| Sbjct: 44394 ctggagcttggatgttcaacattgtgacatctgttggtatcatcatggtcaacaaggcct 44335 Query: 182 taatggctacacatggttttagctttg 208 |||||||||||||||||||||| |||| Sbjct: 44334 taatggctacacatggttttagttttg 44308 Score = 153 bits (77), Expect = 8e-34 Identities = 149/173 (86%) Strand = Plus / Minus Query: 211 acaacattgactgggatgcattttgcaactaccactttgatgacattggtaatgaaatgg 270 |||||||||||||| ||||||||||||| || |||||||||||||| |||||||||||| Sbjct: 44179 acaacattgactggactgcattttgcaaccacgactttgatgacattagtaatgaaatgg 44120 Query: 271 ttgggatacgttcagccatctcatttacctctgtcggagctagtaaagtttgtatttttc 330 ||||||| |||| || || | ||||| || | || ||| |||| ||||| ||||| Sbjct: 44119 ctgggatatattcaaccgtcctacttaccagtgccagaactaataaaatttgtctttttt 44060 Query: 331 gcaaatctatcaattgttgggatgaatgttagcttgatgtggaactctgttgg 383 ||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 44059 gcaaacctatcaattgttgggatgaatgttagtttgatgtggaactctgttgg 44007 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Minus Query: 457 tactcgagggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgtgtaca 516 ||||| || ||||||||| | |||||| ||||||| || |||||||| | |||||||| Sbjct: 43852 tactcaagagatacaaagttcagtataatggttgttctagtaggtgttgccgtgtgtact 43793 Query: 517 gtttctgatgttagtgtaaatgcgcaaggattggtagctgctgtaatagcagtttgcggc 576 || ||||||||||||| ||| | ||||| | ||||||| ||||||| ||||| || Sbjct: 43792 gtgactgatgttagtgtgaattcacaagggctcatagctgccataatagcggtttggagc 43733 Query: 577 actgcattacaacagcat 594 |||||| ||||||||||| Sbjct: 43732 actgcactacaacagcat 43715
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 165 bits (83), Expect = 2e-37 Identities = 131/147 (89%) Strand = Plus / Minus Query: 62 ctacatgataagaaaccatggcaccaggaagcaaggcagagaaaaaagcagcattggatg 121 |||||||| |||| | ||||||||| |||||||||||||||| |||||||||||| |||| Sbjct: 7089605 ctacatgacaagagaacatggcacctggaagcaaggcagagagaaaagcagcattagatg 7089546 Query: 122 ctggggcatggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggcct 181 |||| || ||||||||||| |||| || || ||||| || ||||||||||||||||||| Sbjct: 7089545 ctggagcttggatgttcaacattgtgacatctgttggtatcatcatggtcaacaaggcct 7089486 Query: 182 taatggctacacatggttttagctttg 208 |||||||||||||||||||||| |||| Sbjct: 7089485 taatggctacacatggttttagttttg 7089459 Score = 153 bits (77), Expect = 8e-34 Identities = 149/173 (86%) Strand = Plus / Minus Query: 211 acaacattgactgggatgcattttgcaactaccactttgatgacattggtaatgaaatgg 270 |||||||||||||| ||||||||||||| || |||||||||||||| |||||||||||| Sbjct: 7089330 acaacattgactggactgcattttgcaaccacgactttgatgacattagtaatgaaatgg 7089271 Query: 271 ttgggatacgttcagccatctcatttacctctgtcggagctagtaaagtttgtatttttc 330 ||||||| |||| || || | ||||| || | || ||| |||| ||||| ||||| Sbjct: 7089270 ctgggatatattcaaccgtcctacttaccagtgccagaactaataaaatttgtctttttt 7089211 Query: 331 gcaaatctatcaattgttgggatgaatgttagcttgatgtggaactctgttgg 383 ||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 7089210 gcaaacctatcaattgttgggatgaatgttagtttgatgtggaactctgttgg 7089158 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Minus Query: 457 tactcgagggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgtgtaca 516 ||||| || ||||||||| | |||||| ||||||| || |||||||| | |||||||| Sbjct: 7089003 tactcaagagatacaaagttcagtataatggttgttctagtaggtgttgccgtgtgtact 7088944 Query: 517 gtttctgatgttagtgtaaatgcgcaaggattggtagctgctgtaatagcagtttgcggc 576 || ||||||||||||| ||| | ||||| | ||||||| ||||||| ||||| || Sbjct: 7088943 gtgactgatgttagtgtgaattcacaagggctcatagctgccataatagcggtttggagc 7088884 Query: 577 actgcattacaacagcat 594 |||||| ||||||||||| Sbjct: 7088883 actgcactacaacagcat 7088866
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 149 bits (75), Expect = 1e-32 Identities = 156/183 (85%) Strand = Plus / Minus Query: 211 acaacattgactgggatgcattttgcaactaccactttgatgacattggtaatgaaatgg 270 |||||||||||||| ||||||||||||| || || ||||||||||| |||||||||||| Sbjct: 24291959 acaacattgactggattgcattttgcaaccacaaccttgatgacattagtaatgaaatgg 24291900 Query: 271 ttgggatacgttcagccatctcatttacctctgtcggagctagtaaagtttgtatttttc 330 |||||| | |||||||||| ||||||| || | || || || || || || ||||| Sbjct: 24291899 ttgggacatattcagccatcctatttaccattgccagaactcgttaaattcgtctttttt 24291840 Query: 331 gcaaatctatcaattgttgggatgaatgttagcttgatgtggaactctgttggcttttat 390 ||||| ||||||||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 24291839 gcaaacttatcaattgttgggatgaatgttagtttgatgtggaactctgttggattctat 24291780 Query: 391 cag 393 ||| Sbjct: 24291779 cag 24291777 Score = 141 bits (71), Expect = 3e-30 Identities = 128/147 (87%) Strand = Plus / Minus Query: 62 ctacatgataagaaaccatggcaccaggaagcaaggcagagaaaaaagcagcattggatg 121 ||||||||||||||| |||||||||| || ||| ||||||| |||||||| |||||| Sbjct: 24292263 ctacatgataagaaagtatggcaccagcaaacaaagcagagagaaaagcagtgctggatg 24292204 Query: 122 ctggggcatggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggcct 181 |||| |||||||||||||| ||||| || || ||||| || ||||||||||||||||| | Sbjct: 24292203 ctggagcatggatgttcaacgttgtgacatcagttggtatcatcatggtcaacaaggcat 24292144 Query: 182 taatggctacacatggttttagctttg 208 ||||||| |||||||||||||| |||| Sbjct: 24292143 taatggccacacatggttttagttttg 24292117
>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2055_H10 Length = 119290 Score = 149 bits (75), Expect = 1e-32 Identities = 156/183 (85%) Strand = Plus / Minus Query: 211 acaacattgactgggatgcattttgcaactaccactttgatgacattggtaatgaaatgg 270 |||||||||||||| ||||||||||||| || || ||||||||||| |||||||||||| Sbjct: 92347 acaacattgactggattgcattttgcaaccacaaccttgatgacattagtaatgaaatgg 92288 Query: 271 ttgggatacgttcagccatctcatttacctctgtcggagctagtaaagtttgtatttttc 330 |||||| | |||||||||| ||||||| || | || || || || || || ||||| Sbjct: 92287 ttgggacatattcagccatcctatttaccattgccagaactcgttaaattcgtctttttt 92228 Query: 331 gcaaatctatcaattgttgggatgaatgttagcttgatgtggaactctgttggcttttat 390 ||||| ||||||||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 92227 gcaaacttatcaattgttgggatgaatgttagtttgatgtggaactctgttggattctat 92168 Query: 391 cag 393 ||| Sbjct: 92167 cag 92165 Score = 141 bits (71), Expect = 3e-30 Identities = 128/147 (87%) Strand = Plus / Minus Query: 62 ctacatgataagaaaccatggcaccaggaagcaaggcagagaaaaaagcagcattggatg 121 ||||||||||||||| |||||||||| || ||| ||||||| |||||||| |||||| Sbjct: 92651 ctacatgataagaaagtatggcaccagcaaacaaagcagagagaaaagcagtgctggatg 92592 Query: 122 ctggggcatggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggcct 181 |||| |||||||||||||| ||||| || || ||||| || ||||||||||||||||| | Sbjct: 92591 ctggagcatggatgttcaacgttgtgacatcagttggtatcatcatggtcaacaaggcat 92532 Query: 182 taatggctacacatggttttagctttg 208 ||||||| |||||||||||||| |||| Sbjct: 92531 taatggccacacatggttttagttttg 92505
>dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0407A09 Length = 103788 Score = 149 bits (75), Expect = 1e-32 Identities = 156/183 (85%) Strand = Plus / Minus Query: 211 acaacattgactgggatgcattttgcaactaccactttgatgacattggtaatgaaatgg 270 |||||||||||||| ||||||||||||| || || ||||||||||| |||||||||||| Sbjct: 21497 acaacattgactggattgcattttgcaaccacaaccttgatgacattagtaatgaaatgg 21438 Query: 271 ttgggatacgttcagccatctcatttacctctgtcggagctagtaaagtttgtatttttc 330 |||||| | |||||||||| ||||||| || | || || || || || || ||||| Sbjct: 21437 ttgggacatattcagccatcctatttaccattgccagaactcgttaaattcgtctttttt 21378 Query: 331 gcaaatctatcaattgttgggatgaatgttagcttgatgtggaactctgttggcttttat 390 ||||| ||||||||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 21377 gcaaacttatcaattgttgggatgaatgttagtttgatgtggaactctgttggattctat 21318 Query: 391 cag 393 ||| Sbjct: 21317 cag 21315 Score = 141 bits (71), Expect = 3e-30 Identities = 128/147 (87%) Strand = Plus / Minus Query: 62 ctacatgataagaaaccatggcaccaggaagcaaggcagagaaaaaagcagcattggatg 121 ||||||||||||||| |||||||||| || ||| ||||||| |||||||| |||||| Sbjct: 21801 ctacatgataagaaagtatggcaccagcaaacaaagcagagagaaaagcagtgctggatg 21742 Query: 122 ctggggcatggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggcct 181 |||| |||||||||||||| ||||| || || ||||| || ||||||||||||||||| | Sbjct: 21741 ctggagcatggatgttcaacgttgtgacatcagttggtatcatcatggtcaacaaggcat 21682 Query: 182 taatggctacacatggttttagctttg 208 ||||||| |||||||||||||| |||| Sbjct: 21681 taatggccacacatggttttagttttg 21655
>dbj|AK069766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026F21, full insert sequence Length = 3259 Score = 149 bits (75), Expect = 1e-32 Identities = 156/183 (85%) Strand = Plus / Plus Query: 211 acaacattgactgggatgcattttgcaactaccactttgatgacattggtaatgaaatgg 270 |||||||||||||| ||||||||||||| || || ||||||||||| |||||||||||| Sbjct: 947 acaacattgactggattgcattttgcaaccacaaccttgatgacattagtaatgaaatgg 1006 Query: 271 ttgggatacgttcagccatctcatttacctctgtcggagctagtaaagtttgtatttttc 330 |||||| | |||||||||| ||||||| || | || || || || || || ||||| Sbjct: 1007 ttgggacatattcagccatcctatttaccattgccagaactcgttaaattcgtctttttt 1066 Query: 331 gcaaatctatcaattgttgggatgaatgttagcttgatgtggaactctgttggcttttat 390 ||||| ||||||||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 1067 gcaaacttatcaattgttgggatgaatgttagtttgatgtggaactctgttggattctat 1126 Query: 391 cag 393 ||| Sbjct: 1127 cag 1129 Score = 141 bits (71), Expect = 3e-30 Identities = 128/147 (87%) Strand = Plus / Plus Query: 62 ctacatgataagaaaccatggcaccaggaagcaaggcagagaaaaaagcagcattggatg 121 ||||||||||||||| |||||||||| || ||| ||||||| |||||||| |||||| Sbjct: 643 ctacatgataagaaagtatggcaccagcaaacaaagcagagagaaaagcagtgctggatg 702 Query: 122 ctggggcatggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggcct 181 |||| |||||||||||||| ||||| || || ||||| || ||||||||||||||||| | Sbjct: 703 ctggagcatggatgttcaacgttgtgacatcagttggtatcatcatggtcaacaaggcat 762 Query: 182 taatggctacacatggttttagctttg 208 ||||||| |||||||||||||| |||| Sbjct: 763 taatggccacacatggttttagttttg 789 Score = 50.1 bits (25), Expect = 0.009 Identities = 160/205 (78%) Strand = Plus / Plus Query: 390 tcagattgcgaagctatctattattccacttctatgcattatggaggtcctgtttgaaaa 449 ||||||||| ||| | | |||||||||| | | |||||| |||| |||||||||| || Sbjct: 1208 tcagattgccaagttgtgtattattccagtcttgtgcattctggaaatcctgtttgacaa 1267 Query: 450 ttttcgttactcgagggatacaaagcttagtatagtggttgtccttgtaggtgtgggagt 509 | |||||||| ||| ||||||| || ||||||||| |||| | ||||| || | || Sbjct: 1268 agtccgttactcaaggaatacaaaactcagtatagtgcttgttttagtaggagttgctgt 1327 Query: 510 gtgtacagtttctgatgttagtgtaaatgcgcaaggattggtagctgctgtaatagcagt 569 ||||| || ||||||||||||| ||| | |||| || |||| |||||||| ||||| Sbjct: 1328 atgtactgtgactgatgttagtgtgaattcaaaagggctgctagcagctgtaattgcagt 1387 Query: 570 ttgcggcactgcattacaacagcat 594 ||| |||| ||| |||| |||||| Sbjct: 1388 ttggagcacagcactacagcagcat 1412
>dbj|AK105118.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A05, full insert sequence Length = 1843 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 340 tcaattgttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcg 399 ||||||||||| |||||||| |||||||||||||||||||| || ||||||||||| || Sbjct: 646 tcaattgttggaatgaatgtgagcttgatgtggaactctgtgggattttatcagatagca 705 Query: 400 aagct 404 ||||| Sbjct: 706 aagct 710 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 154 gttggcataatcatggtcaacaaggccttaatggctacacatggttttagctttgccaca 213 ||||| || ||||||||||||||||| | |||||||||||||| || || || |||||| Sbjct: 460 gttggaatcatcatggtcaacaaggctctgatggctacacatggattcagtttcgccaca 519 Query: 214 acattgactgggatgcattttgcaactaccactttgatgac 254 ||||| ||||| | ||||||| || ||||| |||||||| Sbjct: 520 acattaactggtcttcattttgtgacaaccaccttgatgac 560 Score = 63.9 bits (32), Expect = 6e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 464 gggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgtgtacagtttctg 523 |||| |||||||| || ||| ||||||| ||| ||||||| | ||| || |||||| ||| Sbjct: 770 gggacacaaagctgagcataatggttgtgcttataggtgttgcagtctgcacagttactg 829 Query: 524 atgttagtgtaaatgcgcaaggattggtagctgctgtaatagcagtttgcggcactgcat 583 |||| ||||||||||| |||| ||| |||||||| ||||| ||||| |||| || | Sbjct: 830 atgtcagtgtaaatgcaaaaggtctggctgctgctgttatagctgtttggagcacagctt 889 Query: 584 tacaacagcattatgt 599 ||||||| ||||||| Sbjct: 890 tacaacaatattatgt 905
>dbj|AK101335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034I10, full insert sequence Length = 1559 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 340 tcaattgttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcg 399 ||||||||||| |||||||| |||||||||||||||||||| || ||||||||||| || Sbjct: 645 tcaattgttggaatgaatgtgagcttgatgtggaactctgtgggattttatcagatagca 704 Query: 400 aagct 404 ||||| Sbjct: 705 aagct 709 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 154 gttggcataatcatggtcaacaaggccttaatggctacacatggttttagctttgccaca 213 ||||| || ||||||||||||||||| | |||||||||||||| || || || |||||| Sbjct: 459 gttggaatcatcatggtcaacaaggctctgatggctacacatggattcagtttcgccaca 518 Query: 214 acattgactgggatgcattttgcaactaccactttgatgac 254 ||||| ||||| | ||||||| || ||||| |||||||| Sbjct: 519 acattaactggtcttcattttgtgacaaccaccttgatgac 559 Score = 63.9 bits (32), Expect = 6e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 464 gggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgtgtacagtttctg 523 |||| |||||||| || ||| ||||||| ||| ||||||| | ||| || |||||| ||| Sbjct: 769 gggacacaaagctgagcataatggttgtgcttataggtgttgcagtctgcacagttactg 828 Query: 524 atgttagtgtaaatgcgcaaggattggtagctgctgtaatagcagtttgcggcactgcat 583 |||| ||||||||||| |||| ||| |||||||| ||||| ||||| |||| || | Sbjct: 829 atgtcagtgtaaatgcaaaaggtctggctgctgctgttatagctgtttggagcacagctt 888 Query: 584 tacaacagcattatgt 599 ||||||| ||||||| Sbjct: 889 tacaacaatattatgt 904
>ref|NM_117049.3| Arabidopsis thaliana unknown protein AT4G09810 mRNA, complete cds Length = 1362 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaag 402 |||||||| ||||||||||| | ||||||||||||||||| |||||||||||||| ||| Sbjct: 385 attgttggaatgaatgttagtcttatgtggaactctgttgggttttatcagattgcaaag 444 Query: 403 ct 404 || Sbjct: 445 ct 446 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 106 aaagcagcattggatgctggggcatggatgttcaatgttgtaacttcggttggcataatc 165 |||||| |||| ||||||| || ||||||||||||||||| ||||| ||||| || ||| Sbjct: 148 aaagcaacattagatgctgctgcttggatgttcaatgttgttacttctgttggtatcatc 207 Query: 166 atggtcaacaaggccttaatggctacacatggttttagctttgccacaac 215 || || || || || ||||||||||| |||| ||||||||||| ||||| Sbjct: 208 attgttaataaagctttaatggctacttatggctttagctttgctacaac 257 Score = 44.1 bits (22), Expect = 0.53 Identities = 67/82 (81%) Strand = Plus / Plus Query: 452 ttcgttactcgagggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgt 511 |||||||||| || |||||||| ||||| || | |||| ||||| ||||| || || | Sbjct: 494 ttcgttactcaagagatacaaaacttagcattggacttgttcttgttggtgttggtgttt 553 Query: 512 gtacagtttctgatgttagtgt 533 |||| ||| ||||||||||||| Sbjct: 554 gtactgttactgatgttagtgt 575
>gb|BT010950.1| Arabidopsis thaliana At4g09810 gene, complete cds Length = 1129 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaag 402 |||||||| ||||||||||| | ||||||||||||||||| |||||||||||||| ||| Sbjct: 313 attgttggaatgaatgttagtcttatgtggaactctgttgggttttatcagattgcaaag 372 Query: 403 ct 404 || Sbjct: 373 ct 374 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 106 aaagcagcattggatgctggggcatggatgttcaatgttgtaacttcggttggcataatc 165 |||||| |||| ||||||| || ||||||||||||||||| ||||| ||||| || ||| Sbjct: 76 aaagcaacattagatgctgctgcttggatgttcaatgttgttacttctgttggtatcatc 135 Query: 166 atggtcaacaaggccttaatggctacacatggttttagctttgccacaac 215 || || || || || ||||||||||| |||| ||||||||||| ||||| Sbjct: 136 attgttaataaagctttaatggctacttatggctttagctttgctacaac 185 Score = 44.1 bits (22), Expect = 0.53 Identities = 67/82 (81%) Strand = Plus / Plus Query: 452 ttcgttactcgagggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgt 511 |||||||||| || |||||||| ||||| || | |||| ||||| ||||| || || | Sbjct: 422 ttcgttactcaagagatacaaaacttagcattggacttgttcttgttggtgttggtgttt 481 Query: 512 gtacagtttctgatgttagtgt 533 |||| ||| ||||||||||||| Sbjct: 482 gtactgttactgatgttagtgt 503
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 340 tcaattgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 ||||||||||| |||||||| |||||||||||||||||||| || ||||||||| Sbjct: 2664410 tcaattgttggaatgaatgtgagcttgatgtggaactctgtgggattttatcag 2664357 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 |||||||| |||||||| |||||||||||||||||||| || ||||||||| Sbjct: 2685112 attgttggaatgaatgtgagcttgatgtggaactctgtggggttttatcag 2685162 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 464 gggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgtgtacagtttctg 523 |||| |||||||| || ||| ||||||| ||| ||||||| | ||| || |||||| ||| Sbjct: 2664202 gggacacaaagctgagcataatggttgtgcttataggtgttgcagtctgcacagttactg 2664143 Query: 524 atgttagtgtaaatgcgcaaggattggtagctgctgtaatagcagtttgcggcactgcat 583 |||| ||||||||||| |||| ||| |||||||| ||||| ||||| |||| || | Sbjct: 2664142 atgtcagtgtaaatgcaaaaggtctggctgctgctgttatagctgtttggagcacagctt 2664083 Query: 584 tacaaca 590 ||||||| Sbjct: 2664082 tacaaca 2664076 Score = 50.1 bits (25), Expect = 0.009 Identities = 88/109 (80%) Strand = Plus / Plus Query: 464 gggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgtgtacagtttctg 523 |||| |||||||| || ||| ||||||| ||| ||||||| | || || |||||| ||| Sbjct: 2685323 gggacacaaagctgagcataatggttgtgcttataggtgttgcggtctgcacagttactg 2685382 Query: 524 atgttagtgtaaatgcgcaaggattggtagctgctgtaatagcagtttg 572 |||| ||||||||||| |||| ||| |||||||| ||||| ||||| Sbjct: 2685383 atgtcagtgtaaatgcaaaaggtctggctgctgctgttatagctgtttg 2685431 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Minus Query: 154 gttggcataatcatggtcaacaaggccttaatggctacacatgg 197 ||||| || ||||||||||||||||| | |||||||||||||| Sbjct: 2665162 gttggaatcatcatggtcaacaaggctctgatggctacacatgg 2665119 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 154 gttggcataatcatggtcaacaaggccttaatggctacacatgg 197 ||||| || ||||||||||||||||| | |||||||| ||||| Sbjct: 2684273 gttggaatcatcatggtcaacaaggctctgatggctacgcatgg 2684316
>emb|BX828030.1|CNS0A3V6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZH09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1306 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaag 402 |||||||| ||||||||||| | ||||||||||||||||| |||||||||||||| ||| Sbjct: 385 attgttggaatgaatgttagtcttatgtggaactctgttgggttttatcagattgcaaag 444 Query: 403 ct 404 || Sbjct: 445 ct 446 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 106 aaagcagcattggatgctggggcatggatgttcaatgttgtaacttcggttggcataatc 165 |||||| |||| ||||||| || ||||||||||||||||| ||||| ||||| || ||| Sbjct: 148 aaagcaacattagatgctgctgcttggatgttcaatgttgttacttctgttggtatcatc 207 Query: 166 atggtcaacaaggccttaatggctacacatggttttagctttgccacaac 215 || || || || || ||||||||||| |||| ||||||||||| ||||| Sbjct: 208 attgttaataaagctttaatggctacttatggctttagctttgctacaac 257 Score = 44.1 bits (22), Expect = 0.53 Identities = 67/82 (81%) Strand = Plus / Plus Query: 452 ttcgttactcgagggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgt 511 |||||||||| || |||||||| ||||| || | |||| ||||| ||||| || || | Sbjct: 494 ttcgttactcaagagatacaaaacttagcattggacttgttcttgttggtgttggtgttt 553 Query: 512 gtacagtttctgatgttagtgt 533 |||| ||| ||||||||||||| Sbjct: 554 gtactgttactgatgttagtgt 575
>dbj|AK072996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145H12, full insert sequence Length = 1509 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaag 402 |||||||| |||||||| |||||||||||||||||||| || ||||||||||| || ||| Sbjct: 470 attgttggaatgaatgtgagcttgatgtggaactctgtggggttttatcagatagcaaag 529 Query: 403 ct 404 || Sbjct: 530 ct 531 Score = 50.1 bits (25), Expect = 0.009 Identities = 88/109 (80%) Strand = Plus / Plus Query: 464 gggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgtgtacagtttctg 523 |||| |||||||| || ||| ||||||| ||| ||||||| | || || |||||| ||| Sbjct: 591 gggacacaaagctgagcataatggttgtgcttataggtgttgcggtctgcacagttactg 650 Query: 524 atgttagtgtaaatgcgcaaggattggtagctgctgtaatagcagtttg 572 |||| ||||||||||| |||| ||| |||||||| ||||| ||||| Sbjct: 651 atgtcagtgtaaatgcaaaaggtctggctgctgctgttatagctgtttg 699 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Plus Query: 154 gttggcataatcatggtcaacaaggccttaatggctacacatggttttagctttgccaca 213 ||||| || ||||||||||||||||| | |||||||| ||||| || || || |||||| Sbjct: 281 gttggaatcatcatggtcaacaaggctctgatggctacgcatggattcagtttcgccaca 340 Query: 214 acattgactgggatgcattttgcaactaccactttgatgac 254 || || ||||| | ||||||| || ||||| |||||||| Sbjct: 341 accttaactggccttcattttgtgacaaccaccttgatgac 381
>dbj|AK060206.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-A10, full insert sequence Length = 1628 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaag 402 |||||||| |||||||| |||||||||||||||||||| || ||||||||||| || ||| Sbjct: 408 attgttggaatgaatgtgagcttgatgtggaactctgtggggttttatcagatagcaaag 467 Query: 403 ct 404 || Sbjct: 468 ct 469 Score = 50.1 bits (25), Expect = 0.009 Identities = 88/109 (80%) Strand = Plus / Plus Query: 464 gggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgtgtacagtttctg 523 |||| |||||||| || ||| ||||||| ||| ||||||| | || || |||||| ||| Sbjct: 529 gggacacaaagctgagcataatggttgtgcttataggtgttgcggtctgcacagttactg 588 Query: 524 atgttagtgtaaatgcgcaaggattggtagctgctgtaatagcagtttg 572 |||| ||||||||||| |||| ||| |||||||| ||||| ||||| Sbjct: 589 atgtcagtgtaaatgcaaaaggtctggctgctgctgttatagctgtttg 637 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Plus Query: 154 gttggcataatcatggtcaacaaggccttaatggctacacatggttttagctttgccaca 213 ||||| || ||||||||||||||||| | |||||||| ||||| || || || |||||| Sbjct: 219 gttggaatcatcatggtcaacaaggctctgatggctacgcatggattcagtttcgccaca 278 Query: 214 acattgactgggatgcattttgcaactaccactttgatgac 254 || || ||||| | ||||||| || ||||| |||||||| Sbjct: 279 accttaactggccttcattttgtgacaaccaccttgatgac 319
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 340 tcaattgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 ||||||||||| |||||||| |||||||||||||||||||| || ||||||||| Sbjct: 2664354 tcaattgttggaatgaatgtgagcttgatgtggaactctgtgggattttatcag 2664301 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 |||||||| |||||||| |||||||||||||||||||| || ||||||||| Sbjct: 2685056 attgttggaatgaatgtgagcttgatgtggaactctgtggggttttatcag 2685106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 464 gggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgtgtacagtttctg 523 |||| |||||||| || ||| ||||||| ||| ||||||| | ||| || |||||| ||| Sbjct: 2664146 gggacacaaagctgagcataatggttgtgcttataggtgttgcagtctgcacagttactg 2664087 Query: 524 atgttagtgtaaatgcgcaaggattggtagctgctgtaatagcagtttgcggcactgcat 583 |||| ||||||||||| |||| ||| |||||||| ||||| ||||| |||| || | Sbjct: 2664086 atgtcagtgtaaatgcaaaaggtctggctgctgctgttatagctgtttggagcacagctt 2664027 Query: 584 tacaaca 590 ||||||| Sbjct: 2664026 tacaaca 2664020 Score = 50.1 bits (25), Expect = 0.009 Identities = 88/109 (80%) Strand = Plus / Plus Query: 464 gggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgtgtacagtttctg 523 |||| |||||||| || ||| ||||||| ||| ||||||| | || || |||||| ||| Sbjct: 2685267 gggacacaaagctgagcataatggttgtgcttataggtgttgcggtctgcacagttactg 2685326 Query: 524 atgttagtgtaaatgcgcaaggattggtagctgctgtaatagcagtttg 572 |||| ||||||||||| |||| ||| |||||||| ||||| ||||| Sbjct: 2685327 atgtcagtgtaaatgcaaaaggtctggctgctgctgttatagctgtttg 2685375 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Minus Query: 154 gttggcataatcatggtcaacaaggccttaatggctacacatgg 197 ||||| || ||||||||||||||||| | |||||||||||||| Sbjct: 2665106 gttggaatcatcatggtcaacaaggctctgatggctacacatgg 2665063 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 154 gttggcataatcatggtcaacaaggccttaatggctacacatgg 197 ||||| || ||||||||||||||||| | |||||||| ||||| Sbjct: 2684217 gttggaatcatcatggtcaacaaggctctgatggctacgcatgg 2684260
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 340 tcaattgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 ||||||||||| |||||||| |||||||||||||||||||| || ||||||||| Sbjct: 3599 tcaattgttggaatgaatgtgagcttgatgtggaactctgtgggattttatcag 3652 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 464 gggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgtgtacagtttctg 523 |||| |||||||| || ||| ||||||| ||| ||||||| | ||| || |||||| ||| Sbjct: 3807 gggacacaaagctgagcataatggttgtgcttataggtgttgcagtctgcacagttactg 3866 Query: 524 atgttagtgtaaatgcgcaaggattggtagctgctgtaatagcagtttgcggcactgcat 583 |||| ||||||||||| |||| ||| |||||||| ||||| ||||| |||| || | Sbjct: 3867 atgtcagtgtaaatgcaaaaggtctggctgctgctgttatagctgtttggagcacagctt 3926 Query: 584 tacaaca 590 ||||||| Sbjct: 3927 tacaaca 3933 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 154 gttggcataatcatggtcaacaaggccttaatggctacacatgg 197 ||||| || ||||||||||||||||| | |||||||||||||| Sbjct: 2847 gttggaatcatcatggtcaacaaggctctgatggctacacatgg 2890
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 340 tcaattgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 ||||||||||| |||||||| |||||||||||||||||||| || ||||||||| Sbjct: 33336 tcaattgttggaatgaatgtgagcttgatgtggaactctgtgggattttatcag 33283 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 |||||||| |||||||| |||||||||||||||||||| || ||||||||| Sbjct: 54038 attgttggaatgaatgtgagcttgatgtggaactctgtggggttttatcag 54088 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 464 gggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgtgtacagtttctg 523 |||| |||||||| || ||| ||||||| ||| ||||||| | ||| || |||||| ||| Sbjct: 33128 gggacacaaagctgagcataatggttgtgcttataggtgttgcagtctgcacagttactg 33069 Query: 524 atgttagtgtaaatgcgcaaggattggtagctgctgtaatagcagtttgcggcactgcat 583 |||| ||||||||||| |||| ||| |||||||| ||||| ||||| |||| || | Sbjct: 33068 atgtcagtgtaaatgcaaaaggtctggctgctgctgttatagctgtttggagcacagctt 33009 Query: 584 tacaaca 590 ||||||| Sbjct: 33008 tacaaca 33002 Score = 50.1 bits (25), Expect = 0.009 Identities = 88/109 (80%) Strand = Plus / Plus Query: 464 gggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgtgtacagtttctg 523 |||| |||||||| || ||| ||||||| ||| ||||||| | || || |||||| ||| Sbjct: 54249 gggacacaaagctgagcataatggttgtgcttataggtgttgcggtctgcacagttactg 54308 Query: 524 atgttagtgtaaatgcgcaaggattggtagctgctgtaatagcagtttg 572 |||| ||||||||||| |||| ||| |||||||| ||||| ||||| Sbjct: 54309 atgtcagtgtaaatgcaaaaggtctggctgctgctgttatagctgtttg 54357 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Minus Query: 154 gttggcataatcatggtcaacaaggccttaatggctacacatgg 197 ||||| || ||||||||||||||||| | |||||||||||||| Sbjct: 34088 gttggaatcatcatggtcaacaaggctctgatggctacacatgg 34045 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 154 gttggcataatcatggtcaacaaggccttaatggctacacatgg 197 ||||| || ||||||||||||||||| | |||||||| ||||| Sbjct: 53199 gttggaatcatcatggtcaacaaggctctgatggctacgcatgg 53242
>emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 28 Length = 198005 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 106 aaagcagcattggatgctggggcatggatgttcaatgttgtaacttcggttggcataatc 165 |||||| |||| ||||||| || ||||||||||||||||| ||||| ||||| || ||| Sbjct: 2088 aaagcaacattagatgctgctgcttggatgttcaatgttgttacttctgttggtatcatc 2029 Query: 166 atggtcaacaaggccttaatggctacacatggttttagctttg 208 || || || || || ||||||||||| |||| |||||||||| Sbjct: 2028 attgttaataaagctttaatggctacttatggctttagctttg 1986 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 |||||||| ||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 1774 attgttggaatgaatgttagtcttatgtggaactctgttgggttttatcag 1724 Score = 44.1 bits (22), Expect = 0.53 Identities = 67/82 (81%) Strand = Plus / Minus Query: 452 ttcgttactcgagggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgt 511 |||||||||| || |||||||| ||||| || | |||| ||||| ||||| || || | Sbjct: 1586 ttcgttactcaagagatacaaaacttagcattggacttgttcttgttggtgttggtgttt 1527 Query: 512 gtacagtttctgatgttagtgt 533 |||| ||| ||||||||||||| Sbjct: 1526 gtactgttactgatgttagtgt 1505
>emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 27 Length = 197394 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 106 aaagcagcattggatgctggggcatggatgttcaatgttgtaacttcggttggcataatc 165 |||||| |||| ||||||| || ||||||||||||||||| ||||| ||||| || ||| Sbjct: 194482 aaagcaacattagatgctgctgcttggatgttcaatgttgttacttctgttggtatcatc 194423 Query: 166 atggtcaacaaggccttaatggctacacatggttttagctttg 208 || || || || || ||||||||||| |||| |||||||||| Sbjct: 194422 attgttaataaagctttaatggctacttatggctttagctttg 194380 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 |||||||| ||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 194168 attgttggaatgaatgttagtcttatgtggaactctgttgggttttatcag 194118 Score = 44.1 bits (22), Expect = 0.53 Identities = 67/82 (81%) Strand = Plus / Minus Query: 452 ttcgttactcgagggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgt 511 |||||||||| || |||||||| ||||| || | |||| ||||| ||||| || || | Sbjct: 193980 ttcgttactcaagagatacaaaacttagcattggacttgttcttgttggtgttggtgttt 193921 Query: 512 gtacagtttctgatgttagtgt 533 |||| ||| ||||||||||||| Sbjct: 193920 gtactgttactgatgttagtgt 193899
>emb|AL049482.1|ATF17A8 Arabidopsis thaliana DNA chromosome 4, BAC clone F17A8 (ESSA project) Length = 128071 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 106 aaagcagcattggatgctggggcatggatgttcaatgttgtaacttcggttggcataatc 165 |||||| |||| ||||||| || ||||||||||||||||| ||||| ||||| || ||| Sbjct: 75181 aaagcaacattagatgctgctgcttggatgttcaatgttgttacttctgttggtatcatc 75122 Query: 166 atggtcaacaaggccttaatggctacacatggttttagctttg 208 || || || || || ||||||||||| |||| |||||||||| Sbjct: 75121 attgttaataaagctttaatggctacttatggctttagctttg 75079 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 |||||||| ||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 74867 attgttggaatgaatgttagtcttatgtggaactctgttgggttttatcag 74817 Score = 44.1 bits (22), Expect = 0.53 Identities = 67/82 (81%) Strand = Plus / Minus Query: 452 ttcgttactcgagggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgt 511 |||||||||| || |||||||| ||||| || | |||| ||||| ||||| || || | Sbjct: 74679 ttcgttactcaagagatacaaaacttagcattggacttgttcttgttggtgttggtgttt 74620 Query: 512 gtacagtttctgatgttagtgt 533 |||| ||| ||||||||||||| Sbjct: 74619 gtactgttactgatgttagtgt 74598
>ref|NM_103124.2| Arabidopsis thaliana unknown protein AT1G34020 mRNA, complete cds Length = 1430 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaag 402 |||||||| |||||||| || | ||||||||||||||||| |||||||||||||| ||| Sbjct: 474 attgttggaatgaatgtcagtcttatgtggaactctgttggtttttatcagattgctaag 533 Query: 403 ct 404 || Sbjct: 534 ct 535 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 130 tggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggccttaatggct 189 |||||||||||||| || ||||| ||||| || ||||| || || || || |||||||| Sbjct: 261 tggatgttcaatgtcgtcacttctgttggtatcatcattgttaataaagctttaatggcg 320 Query: 190 acacatggttttagctttgccacaacattgactgg 224 || |||||| ||||||||| ||||| || ||||| Sbjct: 321 acttatggttatagctttgctacaacgttaactgg 355 Score = 42.1 bits (21), Expect = 2.1 Identities = 69/85 (81%) Strand = Plus / Plus Query: 452 ttcgttactcgagggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgt 511 ||||||| || || |||||||||||||| |||| | || ||||| ||||| || || | Sbjct: 583 ttcgttattccagagatacaaagcttagcataggactggttcttgtgggtgttggtgttt 642 Query: 512 gtacagtttctgatgttagtgtaaa 536 | || ||| |||||||||||||||| Sbjct: 643 gcactgttactgatgttagtgtaaa 667
>emb|BX814958.1|CNS0ABG6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1415 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaag 402 |||||||| |||||||| || | ||||||||||||||||| |||||||||||||| ||| Sbjct: 449 attgttggaatgaatgtcagtcttatgtggaactctgttggtttttatcagattgctaag 508 Query: 403 ct 404 || Sbjct: 509 ct 510 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 130 tggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggccttaatggct 189 |||||||||||||| || ||||| ||||| || ||||| || || || || |||||||| Sbjct: 236 tggatgttcaatgtcgtcacttctgttggtatcatcattgttaataaagctttaatggcg 295 Query: 190 acacatggttttagctttgccacaacattgactgg 224 || |||||| ||||||||| ||||| || ||||| Sbjct: 296 acttatggttatagctttgctacaacgttaactgg 330 Score = 42.1 bits (21), Expect = 2.1 Identities = 69/85 (81%) Strand = Plus / Plus Query: 452 ttcgttactcgagggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgt 511 ||||||| || || |||||||||||||| |||| | || ||||| ||||| || || | Sbjct: 558 ttcgttattccagagatacaaagcttagcataggactggttcttgtgggtgttggtgttt 617 Query: 512 gtacagtttctgatgttagtgtaaa 536 | || ||| |||||||||||||||| Sbjct: 618 gcactgttactgatgttagtgtaaa 642
>emb|BX818663.1|CNS0AB9N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZD11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1329 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaag 402 |||||||| |||||||| || | ||||||||||||||||| |||||||||||||| ||| Sbjct: 466 attgttggaatgaatgtaagtcttatgtggaactctgttggtttttatcagattgctaag 525 Query: 403 ct 404 || Sbjct: 526 ct 527 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 130 tggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggccttaatggct 189 |||||||||||||| || ||||| ||||| || ||||| || || || || |||||||| Sbjct: 253 tggatgttcaatgtcgtcacttctgttggtatcatcattgttaataaagctttaatggcg 312 Query: 190 acacatggttttagctttgccacaacattgactgg 224 || |||||| ||||||||| ||||| || ||||| Sbjct: 313 acttatggttatagctttgctacaacgttaactgg 347
>gb|AY088535.1| Arabidopsis thaliana clone 7642 mRNA, complete sequence Length = 1400 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaag 402 |||||||| |||||||| || | ||||||||||||||||| |||||||||||||| ||| Sbjct: 474 attgttggaatgaatgtcagtcttatgtggaactctgttggtttttatcagattgctaag 533 Query: 403 ct 404 || Sbjct: 534 ct 535 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 130 tggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggccttaatggct 189 |||||||||||||| || ||||| ||||| || ||||| || || || || |||||||| Sbjct: 261 tggatgttcaatgtcgtcacttctgttggtatcatcattgttaataaagctttaatggcg 320 Query: 190 acacatggttttagctttgccacaac 215 || |||||| ||||||||| ||||| Sbjct: 321 acttatggttatagctttgctacaac 346
>gb|AC148397.13| Medicago truncatula clone mth2-22h4, complete sequence Length = 131213 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 90 aagcaaggcagagaaaaaagcagcattggatgctggggcatggatgttcaatgttgtaac 149 ||||||||| ||||| || ||||| | ||||||| ||||||||||||||||||||| || Sbjct: 60420 aagcaaggctgagaagaaggcagctgtagatgctgcggcatggatgttcaatgttgtcac 60479 Query: 150 ttcggttggcataatcatggtcaacaa 176 || ||||| || ||||| || ||||| Sbjct: 60480 atcagttggaattatcattgtaaacaa 60506
>emb|BX827860.1|CNS0A3RT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH28ZD07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1350 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 106 aaagcagcattggatgctggggcatggatgttcaatgttgtaacttcggttggcataatc 165 |||||| |||| ||||||| || ||||||||||||||||| || || ||||| || ||| Sbjct: 148 aaagcaacattagatgctgctgcttggatgttcaatgttgttacgtctgttggtatcatc 207 Query: 166 atggtcaacaaggccttaatggctacacatggttttagctttg 208 || || || || || ||||||||||| |||| |||||||||| Sbjct: 208 attgttaataaagctttaatggctacttatggctttagctttg 250 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 |||||||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 462 attgttggaatgaatgttagtcgtatgtggaactctgttgggttttatcag 512
>dbj|AP004500.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT05P21, TM0032, complete sequence Length = 106632 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 |||||||| |||||||| || || ||||||||||||||||| ||||||||| Sbjct: 43330 attgttggaatgaatgtgagtttaatgtggaactctgttggtttttatcag 43380
>ref|NM_179196.1| Arabidopsis thaliana unknown protein AT4G39390 transcript variant AT4G39390.2 mRNA, complete cds Length = 1407 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 346 gttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaagct 404 ||||||||||| || || | |||||||| ||||||||||| || |||||||||||||| Sbjct: 506 gttgggatgaacgtcagtctcatgtggaattctgttggcttctaccagattgcgaagct 564
>ref|NM_120099.3| Arabidopsis thaliana unknown protein AT4G39390 transcript variant AT4G39390.1 mRNA, complete cds Length = 1504 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 346 gttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaagct 404 ||||||||||| || || | |||||||| ||||||||||| || |||||||||||||| Sbjct: 584 gttgggatgaacgtcagtctcatgtggaattctgttggcttctaccagattgcgaagct 642
>gb|AY142535.1| Arabidopsis thaliana unknown protein (At4g39390) mRNA, complete cds Length = 1045 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 346 gttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaagct 404 ||||||||||| || || | |||||||| ||||||||||| || |||||||||||||| Sbjct: 283 gttgggatgaacgtcagtctcatgtggaattctgttggcttctaccagattgcgaagct 341
>gb|AY091057.1| Arabidopsis thaliana unknown protein (At4g39390) mRNA, complete cds Length = 1383 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 346 gttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaagct 404 ||||||||||| || || | |||||||| ||||||||||| || |||||||||||||| Sbjct: 506 gttgggatgaacgtcagtctcatgtggaattctgttggcttctaccagattgcgaagct 564
>emb|BX827463.1|CNS0A2WE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS59ZB11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1435 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 346 gttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaagct 404 ||||||||||| || || | |||||||| ||||||||||| || |||||||||||||| Sbjct: 515 gttgggatgaacgtcagtctcatgtggaattctgttggcttctaccagattgcgaagct 573
>emb|BX827252.1|CNS0A2W6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS28ZF09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1278 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 346 gttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaagct 404 ||||||||||| || || | |||||||| ||||||||||| || |||||||||||||| Sbjct: 481 gttgggatgaacgtcagtctcatgtggaattctgttggcttctaccagattgcgaagct 539
>gb|AC079286.2|AC079286 Arabidopsis thaliana chromosome 1 BAC T15K4 genomic sequence, complete sequence Length = 33513 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 |||||||| |||||||| || | ||||||||||||||||| ||||||||| Sbjct: 22098 attgttggaatgaatgtcagtcttatgtggaactctgttggtttttatcag 22148 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Plus Query: 130 tggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggccttaatggct 189 |||||||||||||| || ||||| ||||| || ||||| || || || || |||||||| Sbjct: 21798 tggatgttcaatgtcgtcacttctgttggtatcatcattgttaataaagctttaatggcg 21857 Query: 190 acacatggttttagctttg 208 || |||||| |||||||| Sbjct: 21858 acttatggttatagctttg 21876 Score = 42.1 bits (21), Expect = 2.1 Identities = 69/85 (81%) Strand = Plus / Plus Query: 452 ttcgttactcgagggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgt 511 ||||||| || || |||||||||||||| |||| | || ||||| ||||| || || | Sbjct: 22287 ttcgttattccagagatacaaagcttagcataggactggttcttgtgggtgttggtgttt 22346 Query: 512 gtacagtttctgatgttagtgtaaa 536 | || ||| |||||||||||||||| Sbjct: 22347 gcactgttactgatgttagtgtaaa 22371
>gb|AC015446.4|AC015446 Arabidopsis thaliana chromosome I BAC F12G12 genomic sequence, complete sequence Length = 125632 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 |||||||| |||||||| || | ||||||||||||||||| ||||||||| Sbjct: 89663 attgttggaatgaatgtcagtcttatgtggaactctgttggtttttatcag 89613 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 130 tggatgttcaatgttgtaacttcggttggcataatcatggtcaacaaggccttaatggct 189 |||||||||||||| || ||||| ||||| || ||||| || || || || |||||||| Sbjct: 89963 tggatgttcaatgtcgtcacttctgttggtatcatcattgttaataaagctttaatggcg 89904 Query: 190 acacatggttttagctttg 208 || |||||| |||||||| Sbjct: 89903 acttatggttatagctttg 89885 Score = 42.1 bits (21), Expect = 2.1 Identities = 69/85 (81%) Strand = Plus / Minus Query: 452 ttcgttactcgagggatacaaagcttagtatagtggttgtccttgtaggtgtgggagtgt 511 ||||||| || || |||||||||||||| |||| | || ||||| ||||| || || | Sbjct: 89474 ttcgttattccagagatacaaagcttagcataggactggttcttgtgggtgttggtgttt 89415 Query: 512 gtacagtttctgatgttagtgtaaa 536 | || ||| |||||||||||||||| Sbjct: 89414 gcactgttactgatgttagtgtaaa 89390
>gb|AY087403.1| Arabidopsis thaliana clone 35002 mRNA, complete sequence Length = 1358 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 346 gttgggatgaatgttagcttgatgtggaactctgttggcttttatcagattgcgaagct 404 ||||||||||| || || | |||||||| ||||||||||| || |||||||||||||| Sbjct: 534 gttgggatgaacgtcagtctcatgtggaattctgttggcttctaccagattgcgaagct 592
>gb|AC137827.20| Medicago truncatula clone mth2-20g23, complete sequence Length = 105959 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 343 attgttgggatgaatgttagcttgatgtggaactctgttggcttttatcag 393 |||||||| |||||||| || || |||||||||||||| || || |||||| Sbjct: 27643 attgttggcatgaatgtgagtttaatgtggaactctgtcggtttctatcag 27693
>ref|XM_731615.1| Plasmodium chabaudi chabaudi hypothetical protein (PC301984.00.0) partial mRNA Length = 684 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 gtatattaaaattatcattaga 59 |||||||||||||||||||||| Sbjct: 460 gtatattaaaattatcattaga 439
>gb|AF026208.1| Caenorhabditis elegans cosmid F52D1, complete sequence Length = 29138 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 311 tagtaaagtttgtatttttcgcaaat 336 ||||||||||| |||||||||||||| Sbjct: 28860 tagtaaagtttatatttttcgcaaat 28885
>gb|AC156028.2| Mus musculus BAC clone RP23-61A11 from chromosome 8, complete sequence Length = 212724 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 403 ctatctattattccacttctat 424 |||||||||||||||||||||| Sbjct: 173232 ctatctattattccacttctat 173253
>ref|NM_106317.2| Arabidopsis thaliana unknown protein AT1G76670 mRNA, complete cds Length = 1666 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 aactctgttggcttttatcagattgcgaa 401 |||||||||||||| ||||||||| |||| Sbjct: 633 aactctgttggcttctatcagatttcgaa 661
>gb|AY705912.1| Zea mays cytotype NA hypothetical protein genes, complete cds; tRNA-Met (trnM-ct) gene, atpE-ct and atpB-ct pseudogenes, complete sequence; hypothetical protein genes, complete cds; NADH dehydrogenase subunit I (nad1) gene, partial cds; ribosomal protein S13 (rps13) gene, complete cds; and tRNA-Met (trnfM) gene, complete sequence; mitochondrial Length = 40000 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 gtggttgtccttgtaggtgtg 504 ||||||||||||||||||||| Sbjct: 10862 gtggttgtccttgtaggtgtg 10842
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 gtggttgtccttgtaggtgtg 504 ||||||||||||||||||||| Sbjct: 9865 gtggttgtccttgtaggtgtg 9885
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 gtggttgtccttgtaggtgtg 504 ||||||||||||||||||||| Sbjct: 10862 gtggttgtccttgtaggtgtg 10842
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 gtggttgtccttgtaggtgtg 504 ||||||||||||||||||||| Sbjct: 245163 gtggttgtccttgtaggtgtg 245143
>gb|BT000556.1| Arabidopsis thaliana unknown protein (At1g76670/F28O16_4) mRNA, complete cds Length = 1044 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 aactctgttggcttttatcagattgcgaa 401 |||||||||||||| ||||||||| |||| Sbjct: 301 aactctgttggcttctatcagatttcgaa 329
>gb|AY074532.1| Arabidopsis thaliana unknown protein (At1g76670) mRNA, complete cds Length = 1075 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 aactctgttggcttttatcagattgcgaa 401 |||||||||||||| ||||||||| |||| Sbjct: 301 aactctgttggcttctatcagatttcgaa 329
>gb|AY039973.1| Arabidopsis thaliana unknown protein (At1g76670) mRNA, complete cds Length = 1528 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 aactctgttggcttttatcagattgcgaa 401 |||||||||||||| ||||||||| |||| Sbjct: 590 aactctgttggcttctatcagatttcgaa 618
>emb|AJ633721.1| Arabidopsis thaliana mRNA for UDP-galactose transporter (udpgalt2 gene) Length = 1347 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 aactctgttggcttttatcagattgcgaa 401 |||||||||||||| ||||||||| |||| Sbjct: 326 aactctgttggcttctatcagatttcgaa 354
>emb|BX511227.7| Zebrafish DNA sequence from clone DKEY-100E19 in linkage group 14, complete sequence Length = 262038 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 ttttgtatattaaaattatca 54 ||||||||||||||||||||| Sbjct: 60913 ttttgtatattaaaattatca 60933
>gb|AY666014.1| Thinopyrum elongatum early salt stress and cold acclimation-induced protein 2-1 (Esi2) gene, complete cds Length = 3027 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 344 ttgttgggatgaatgttagcttgat 368 |||||||||||||||| |||||||| Sbjct: 202 ttgttgggatgaatgtaagcttgat 226
>gb|AY058088.1| Arabidopsis thaliana At1g76670/F28O16_4 mRNA, complete cds Length = 1648 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 aactctgttggcttttatcagattgcgaa 401 |||||||||||||| ||||||||| |||| Sbjct: 634 aactctgttggcttctatcagatttcgaa 662
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 tacagtttctgatgttagtgt 533 ||||||||||||||||||||| Sbjct: 23757639 tacagtttctgatgttagtgt 23757619
>dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1113_E01 Length = 73706 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 tacagtttctgatgttagtgt 533 ||||||||||||||||||||| Sbjct: 12569 tacagtttctgatgttagtgt 12549
>dbj|AK069212.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012B09, full insert sequence Length = 2337 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 513 tacagtttctgatgttagtgt 533 ||||||||||||||||||||| Sbjct: 1289 tacagtttctgatgttagtgt 1309
>dbj|AP001875.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2307G24, complete sequence Length = 34000 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 cttttgtatattaaaattatc 53 ||||||||||||||||||||| Sbjct: 7098 cttttgtatattaaaattatc 7118
>emb|AL359636.17| Human DNA sequence from clone RP11-542K23 on chromosome 9, complete sequence Length = 193936 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 tctattattccacttctatgc 426 ||||||||||||||||||||| Sbjct: 159877 tctattattccacttctatgc 159897
>emb|X02451.1|MIZMS1 Maize mitochondrial S-1 DNA from cms-S cytoplasm Length = 6397 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 gtggttgtccttgtaggtgtg 504 ||||||||||||||||||||| Sbjct: 4230 gtggttgtccttgtaggtgtg 4210
>emb|X07041.1|MIZMCMS1 Maize mitochondrial DNA for integrated cms S-1 element Length = 6913 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 gtggttgtccttgtaggtgtg 504 ||||||||||||||||||||| Sbjct: 6155 gtggttgtccttgtaggtgtg 6135
>emb|AL845296.4| Mouse DNA sequence from clone RP23-121B24 on chromosome 2, complete sequence Length = 203414 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 509 tgtgtacagtttctgatgtta 529 ||||||||||||||||||||| Sbjct: 142666 tgtgtacagtttctgatgtta 142646
>gb|AC159290.2| Mus musculus BAC clone RP23-291I2 from chromosome 13, complete sequence Length = 231853 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 agctatctattattccactt 420 |||||||||||||||||||| Sbjct: 171290 agctatctattattccactt 171271
>gb|AC159227.3| Mus musculus BAC clone RP24-334D12 from chromosome 12, complete sequence Length = 211971 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 cattatggaggtcctgtttg 445 |||||||||||||||||||| Sbjct: 124164 cattatggaggtcctgtttg 124145
>gb|AC156572.3| Mus musculus BAC clone RP23-216C6 from chromosome 13, complete sequence Length = 208578 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 agctatctattattccactt 420 |||||||||||||||||||| Sbjct: 78958 agctatctattattccactt 78939
>gb|AC116774.9| Mus musculus chromosome 3, clone RP24-361N19, complete sequence Length = 147728 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tatattaaaattatcattag 58 |||||||||||||||||||| Sbjct: 53943 tatattaaaattatcattag 53924
>gb|AC161329.3| Dasypus novemcinctus clone VMRC5-459N3, complete sequence Length = 144874 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 aaatctatcaattgttggga 352 |||||||||||||||||||| Sbjct: 57862 aaatctatcaattgttggga 57881
>gb|AY166675.1| Plasmodium reichenowi RBL1 pseudogene, complete sequence Length = 7870 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ttttgtatattaaaattatc 53 |||||||||||||||||||| Sbjct: 3242 ttttgtatattaaaattatc 3223
>gb|AC097646.2| Homo sapiens cosmid clone XXcos-2185C14 from 7, complete sequence Length = 42961 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 36007 gaagcaaggcagaggaaaaagcag 35984
>gb|AC160390.2| Mus musculus BAC clone RP24-465C5 from chromosome 12, complete sequence Length = 152049 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 cattatggaggtcctgtttg 445 |||||||||||||||||||| Sbjct: 53530 cattatggaggtcctgtttg 53511
>gb|AC087289.9| Homo sapiens chromosome 17, clone RP11-552F3, complete sequence Length = 203765 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gaaaccatggcaccaggaag 92 |||||||||||||||||||| Sbjct: 104570 gaaaccatggcaccaggaag 104589
>emb|AL954642.9| Human DNA sequence from clone RP11-885N19 on chromosome 9 Contains the 3' end of the CACNA1B gene for alpha 1B subunit of L type voltage-dependent calcium channel, a pseudogene similar to part of interleukin 9 receptor (ILR9), a tubulin, beta polypeptide 4, member Q (TUBB4Q) pseudogene and five CpG islands, complete sequence Length = 154372 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 134789 gaagcaaggcagaggaaaaagcag 134812
>emb|AL669831.13| Human DNA sequence from clone RP11-206L10 on chromosome 1 Contains thirteen novel genes, a novel pseudogene, a novel gene similar to the F-box only protein 25 gene(FBXO25), a novel pseudogene similar to the beta-tubulin family and a CpG island, complete sequence Length = 179567 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 76965 gaagcaaggcagaggaaaaagcag 76942
>emb|AL627309.15| Human DNA sequence from clone RP11-34P13 on chromosome 1 Contains a pseudogene similar to part of DEAD/H box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) (DDX11), two novel pseudogenes, nine novel genes, two novel proteins similar to the olfactory receptor family, a capicua homolog (Drosophila) (CIC) pseudogene and two CpG islands, complete sequence Length = 166904 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 163571 gaagcaaggcagaggaaaaagcag 163548
>emb|AL606534.15| Human DNA sequence from clone RP11-261C10 on chromosome 1 Contains four novel genes, the 5' end of a novel gene and the 3' end of the gene for KARP-1-binding protein (KAB), complete sequence Length = 183541 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 111628 gaagcaaggcagaggaaaaagcag 111605
>emb|AL672138.10| Human DNA sequence from clone RP13-313G19 on chromosome X Contains the 5' end of the OPHN1 gene for oligophrenin, a nudE nuclear distribution gene E homolog like 1 (NDEL1) pseudogene, the 5' end of the gene for a novel protein (MGC21416) and two CpG islands, complete sequence Length = 174534 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aggaagcaaggcagagaaaa 106 |||||||||||||||||||| Sbjct: 119689 aggaagcaaggcagagaaaa 119708
>emb|AL592148.7| Human DNA sequence from clone RP11-378J18 on chromosome 1 Contains the gene for a novel protein (FLJ13840), the TAF1A gene for TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa, two novel genes, the gene for C219-reactive peptide (FLJ39207), the 3' of the gene for a novel protein (FLJ12806) and a CpG island, complete sequence Length = 194034 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 24305 gaagcaaggcagaggaaaaagcag 24282
>emb|AL133216.10| Human DNA sequence from clone RP11-291L22 on chromosome 10 Contains the 3' end of a gene for a novel protein similar to 17-beta-hydroxysteroid dehydrogenase type 7 (HSD17B7), the gene for a novel protein similar to CDC10 cell division cycle 10, homolog (S. cerevisiae) (CDC10), a novel gene, a novel gene containing FLJ14186, a capicua homolog (Drosophila) (CIC) pseudogene and a CpG island, complete sequence Length = 166835 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 44337 gaagcaaggcagaggaaaaagcag 44360
>emb|AL133553.9| Human DNA sequence from clone GS1-174L6 on chromosome 1 Contains the 3' end of the gene for hemicentin, the PRG4 gene for proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein, amptodactyly, arthropathy, coxa vara, pericarditis syndrome), the 3' end of the TPR gene for translocated promoter region (to activated MET oncogene) and a novel gene, complete sequence Length = 190655 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cctacatgataagaaaccat 80 |||||||||||||||||||| Sbjct: 54597 cctacatgataagaaaccat 54616
>gb|AC153894.8| Mus musculus 6 BAC RP23-118E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216116 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 gagaaaaaagcagcattgga 119 |||||||||||||||||||| Sbjct: 152748 gagaaaaaagcagcattgga 152729
>emb|AL627325.6| Zebrafish DNA sequence from clone RP71-1P14 in linkage group 21 Contains part of a novel gene similar to human OPHN1 (oligophrenin 1), a novel gene similar to vertebrate TRPCs (transient receptor potential cation channels), a novel gene for a protein similar to angiopoietins, two novel genes, the birc2 gene for baculoviral IAP repeat-containing protein 2, a novel gene similar to human POLQ (DNA-directed polymerase theta), a novel gene similar to human PCF11 (pre-mRNA cleavage complex II protein Pcf11), a novel gene for a protein similar to glycosyltransferases, a novel gene for a protein similar to guanylate cyclase-activating protein 3 and two CpG islands, complete sequence Length = 163882 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gaaaaaagcagcattggatg 121 |||||||||||||||||||| Sbjct: 32711 gaaaaaagcagcattggatg 32730
>gb|AC016588.9| Homo sapiens chromosome 19 clone CTD-3113P16, complete sequence Length = 144578 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 7393 gaagcaaggcagaggaaaaagcag 7370
>gb|AC110079.3| Homo sapiens BAC clone RP11-384K6 from 4, complete sequence Length = 167099 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 12882 gaagcaaggcagaggaaaaagcag 12905
>gb|AC182391.3| Pan troglodytes BAC clone CH251-510H16 from chromosome 1, complete sequence Length = 188995 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 149032 gaagcaaggcagaggaaaaagcag 149009
>gb|AC026393.11| Homo sapiens chromosome 10 clone RP11-308N23, complete sequence Length = 84208 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 gcattatggaggtcctgtttgaaa 448 ||||||||||||| |||||||||| Sbjct: 43368 gcattatggaggtactgtttgaaa 43391
>gb|AF020782.1|AF020782 Homo sapiens chromosome 20 telomere-associated repeat region Length = 984 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 179 gaagcaaggcagaggaaaaagcag 202
>gb|AC073135.3| Homo sapiens BAC clone RP11-694O4 from 7, complete sequence Length = 190016 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 55027 gaagcaaggcagaggaaaaagcag 55004
>gb|AC115287.5| Homo sapiens chromosome 1 clone RP5-870L9, complete sequence Length = 99182 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 69224 gaagcaaggcagaggaaaaagcag 69201
>gb|AC069287.7| Homo sapiens BAC clone RP11-304M2 from 11, complete sequence Length = 199487 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 90214 gaagcaaggcagaggaaaaagcag 90237
>gb|AC133919.3| Homo sapiens chromosome 16 clone RP11-356C4, complete sequence Length = 210446 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 152834 gaagcaaggcagaggaaaaagcag 152857
>gb|AC079120.6| Homo sapiens BAC clone RP11-345M24 from 2, complete sequence Length = 104547 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 gttggcttttatcagattgc 398 |||||||||||||||||||| Sbjct: 26275 gttggcttttatcagattgc 26256
>gb|AC138393.2| Homo sapiens chromosome 1 clone RP11-504P24, complete sequence Length = 184644 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 91027 gaagcaaggcagaggaaaaagcag 91004
>gb|AC005627.2|AC005627 Homo sapiens PAC clone RP4-577P23 from 1, complete sequence Length = 137304 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gaagcaaggcagagaaaaaagcag 112 |||||||||||||| ||||||||| Sbjct: 3902 gaagcaaggcagaggaaaaagcag 3925
>emb|BX248105.5| Zebrafish DNA sequence from clone CH211-270A9, complete sequence Length = 158673 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 acattgtacactgaaggcag 30 |||||||||||||||||||| Sbjct: 98547 acattgtacactgaaggcag 98528
>emb|CT030172.10| Mouse DNA sequence from clone RP23-313L22 on chromosome 13, complete sequence Length = 228833 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 agctatctattattccactt 420 |||||||||||||||||||| Sbjct: 90554 agctatctattattccactt 90573
>gb|BC084286.1| Xenopus laevis hypothetical LOC495111, mRNA (cDNA clone MGC:82669 IMAGE:5073619), complete cds Length = 2211 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 accactttgatgacattggt 260 |||||||||||||||||||| Sbjct: 971 accactttgatgacattggt 990
>gb|AC157939.15| Mus musculus chromosome 3, clone RP23-51P17, complete sequence Length = 240367 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 ttgtaggtgtgggagtgtgt 513 |||||||||||||||||||| Sbjct: 143005 ttgtaggtgtgggagtgtgt 143024
>emb|AL929379.14| Zebrafish DNA sequence from clone CH211-156H6, complete sequence Length = 167232 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 cttttgtatattaaaattat 52 |||||||||||||||||||| Sbjct: 110996 cttttgtatattaaaattat 110977
>dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA, complete genome Length = 697724 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 ttttgtatattaaaattatcatta 57 ||||||||||||||||||| |||| Sbjct: 330102 ttttgtatattaaaattattatta 330125
>gb|AC171004.2| Mus musculus BAC clone RP23-67N16 from chromosome 13, complete sequence Length = 213660 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 agctatctattattccactt 420 |||||||||||||||||||| Sbjct: 201410 agctatctattattccactt 201391 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,768,702 Number of Sequences: 3902068 Number of extensions: 6768702 Number of successful extensions: 117704 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117235 Number of HSP's gapped (non-prelim): 455 length of query: 603 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 580 effective length of database: 17,143,297,704 effective search space: 9943112668320 effective search space used: 9943112668320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
