ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags23b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|S72187.1| orf2a, orf2b [cucumber mosaic cucumovirus CMV, K, G... 44 0.52
2gb|AF314188.1|AF314188 Cucumber mosaic virus RNA2 putative RNA-d... 44 0.52
3dbj|D86330.1| Cucumber mosaic virus SD RNA2, 2a protein, complet... 44 0.52
4gb|AC135505.15| Medicago truncatula clone mth2-24j8, complete se... 42 2.0
5gb|AC016583.8| Homo sapiens chromosome 5 clone CTD-2591A1, compl... 42 2.0
6ref|XM_471233.1| Oryza sativa (japonica cultivar-group), predic... 40 8.1
7ref|NM_185029.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
8ref|XM_463046.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
9ref|NM_197167.1| Oryza sativa (japonica cultivar-group) putative... 40 8.1
10ref|NM_191662.1| Oryza sativa (japonica cultivar-group), predic... 40 8.1
11ref|XM_470481.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
12ref|NM_186723.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
13gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
14gb|AC150788.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
15gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
16gb|AC137694.5| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
17gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
18gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.1
20gb|AC133861.5| Oryza sativa chromosome 3 BAC OSJNBb0031F05 genom... 40 8.1
21gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic ... 40 8.1
22gb|AY459340.1| Oryza sativa (japonica cultivar-group) clone CL00... 40 8.1
23gb|AC084243.7| Homo sapiens chromosome 11, clone CTD-3224I3, com... 40 8.1
24emb|AL121892.9|HS1195D24 Human DNA sequence from clone RP5-1195D... 40 8.1
25emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4,... 40 8.1
26gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 gen... 40 8.1
27emb|BX647519.1|HSM807665 Homo sapiens mRNA; cDNA DKFZp686P16199 ... 40 8.1
28gb|AC098595.2| Homo sapiens BAC clone RP11-495L18 from 4, comple... 40 8.1
29gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genom... 40 8.1
30gb|AC051663.9|AC051663 Homo sapiens BAC clone RP11-475P15 from Y... 40 8.1
31dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
32dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
33dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
34dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
35dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
36dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
37dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
38dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
39dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
41dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
42gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genom... 40 8.1
43dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.1
44gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genom... 40 8.1
45dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
46dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
47dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
48dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
49dbj|AP005821.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
50dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
51dbj|AP005740.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
52dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
53dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
54dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
55dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
56dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
57dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
58dbj|AB179765.1| Cucumber mosaic virus RNA 2 segment, complete se... 40 8.1
59dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
60dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
61dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
62emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 8.1
63emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 8.1
64gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
65gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
66gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
67emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.1
68emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085... 40 8.1 
>gb|S72187.1| orf2a, orf2b [cucumber mosaic cucumovirus CMV, K, Genomic RNA,  nt]
          Length = 3048

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 247  acctccccttcctaatctccct 268
            ||||||||||||||||||||||
Sbjct: 2750 acctccccttcctaatctccct 2771
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>gb|AF314188.1|AF314188 Cucumber mosaic virus RNA2 putative RNA-directed RNA polymerase gene,
            complete cds
          Length = 3045

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 247  acctccccttcctaatctccct 268
            ||||||||||||||||||||||
Sbjct: 2750 acctccccttcctaatctccct 2771
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>dbj|D86330.1| Cucumber mosaic virus SD RNA2, 2a protein, complete cds
          Length = 3048

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 247  acctccccttcctaatctccct 268
            ||||||||||||||||||||||
Sbjct: 2751 acctccccttcctaatctccct 2772
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>gb|AC135505.15| Medicago truncatula clone mth2-24j8, complete sequence
          Length = 124563

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    ggttgggctttcgatggatct 52
             |||||||||||||||||||||
Sbjct: 61939 ggttgggctttcgatggatct 61919
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>gb|AC016583.8| Homo sapiens chromosome 5 clone CTD-2591A1, complete sequence
          Length = 184769

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 239   ctctgcctacctccccttcct 259
             |||||||||||||||||||||
Sbjct: 64859 ctctgcctacctccccttcct 64839
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>ref|XM_471233.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1140

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 109 gatctgggctagcaattgct 128
           ||||||||||||||||||||
Sbjct: 353 gatctgggctagcaattgct 372
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>ref|NM_185029.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4146

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 109 gatctgggctagcaattgct 128
           ||||||||||||||||||||
Sbjct: 869 gatctgggctagcaattgct 888
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>ref|XM_463046.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3831

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 109 gatctgggctagcaattgct 128
           ||||||||||||||||||||
Sbjct: 944 gatctgggctagcaattgct 963
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>ref|NM_197167.1| Oryza sativa (japonica cultivar-group) putative transposase related
            protein (OSJNBa0017E08.23), mRNA
          Length = 2661

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  gatctgggctagcaattgct 128
            ||||||||||||||||||||
Sbjct: 1493 gatctgggctagcaattgct 1512
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>ref|NM_191662.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4671

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 109 gatctgggctagcaattgct 128
           ||||||||||||||||||||
Sbjct: 869 gatctgggctagcaattgct 888
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>ref|XM_470481.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3615

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 109 gatctgggctagcaattgct 128
           ||||||||||||||||||||
Sbjct: 476 gatctgggctagcaattgct 495
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>ref|NM_186723.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 495

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 gctcgccatcgcatgcactc 241
           ||||||||||||||||||||
Sbjct: 47  gctcgccatcgcatgcactc 28
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>gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0023F12, complete sequence
          Length = 147801

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  gatctgggctagcaattgct 128
            ||||||||||||||||||||
Sbjct: 6380 gatctgggctagcaattgct 6399
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>gb|AC150788.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0073C10, complete sequence
          Length = 165350

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 21339 gatctgggctagcaattgct 21358
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>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02,
              complete sequence
          Length = 143438

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    gatctgggctagcaattgct 128
              ||||||||||||||||||||
Sbjct: 106912 gatctgggctagcaattgct 106931
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>gb|AC137694.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0002B02, complete sequence
          Length = 148881

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 93567 gatctgggctagcaattgct 93548
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>gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0010B06, complete sequence
          Length = 129310

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 44623 gatctgggctagcaattgct 44642
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>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05,
             complete sequence
          Length = 163130

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 55631 gatctgggctagcaattgct 55650
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 35862581 gatctgggctagcaattgct 35862600



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 33106218 gatctgggctagcaattgct 33106237



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 21194000 gatctgggctagcaattgct 21194019



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 18030498 gatctgggctagcaattgct 18030517
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>gb|AC133861.5| Oryza sativa chromosome 3 BAC OSJNBb0031F05 genomic sequence, complete
             sequence
          Length = 131589

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 85703 gatctgggctagcaattgct 85684
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>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete
             sequence
          Length = 174910

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 49915 gatctgggctagcaattgct 49934
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>gb|AY459340.1| Oryza sativa (japonica cultivar-group) clone CL000798.1 R2R3-MYB gene
            region
          Length = 12635

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  gatctgggctagcaattgct 128
            ||||||||||||||||||||
Sbjct: 8633 gatctgggctagcaattgct 8652
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>gb|AC084243.7| Homo sapiens chromosome 11, clone CTD-3224I3, complete sequence
          Length = 154201

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    tcctcccttccagcgcaggg 159
              ||||||||||||||||||||
Sbjct: 147201 tcctcccttccagcgcaggg 147220
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>emb|AL121892.9|HS1195D24 Human DNA sequence from clone RP5-1195D24 on chromosome 20 Contains a
             novel gene, complete sequence
          Length = 77738

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 548   tgttgtcacatgcagtaaaa 567
             ||||||||||||||||||||
Sbjct: 30143 tgttgtcacatgcagtaaaa 30124
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>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20,
             complete sequence
          Length = 138572

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 53179 gatctgggctagcaattgct 53160
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>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete
              sequence
          Length = 136120

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    gatctgggctagcaattgct 128
              ||||||||||||||||||||
Sbjct: 128163 gatctgggctagcaattgct 128182
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>emb|BX647519.1|HSM807665 Homo sapiens mRNA; cDNA DKFZp686P16199 (from clone DKFZp686P16199)
          Length = 2007

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 140 tcctcccttccagcgcaggg 159
           ||||||||||||||||||||
Sbjct: 625 tcctcccttccagcgcaggg 606
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>gb|AC098595.2| Homo sapiens BAC clone RP11-495L18 from 4, complete sequence
          Length = 160151

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 566   aaggaagcaattgtaaattt 585
             ||||||||||||||||||||
Sbjct: 19314 aaggaagcaattgtaaattt 19295
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>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete
             sequence
          Length = 145115

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 98544 gatctgggctagcaattgct 98525
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>gb|AC051663.9|AC051663 Homo sapiens BAC clone RP11-475P15 from Y, complete sequence
          Length = 94414

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   ccaaaacaagctgccctcct 418
             ||||||||||||||||||||
Sbjct: 23930 ccaaaacaagctgccctcct 23911
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 109     gatctgggctagcaattgct 128
               ||||||||||||||||||||
Sbjct: 2437277 gatctgggctagcaattgct 2437258
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 20771412 gatctgggctagcaattgct 20771431



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 109     gatctgggctagcaattgct 128
               ||||||||||||||||||||
Sbjct: 1203358 gatctgggctagcaattgct 1203377
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 18036461 gatctgggctagcaattgct 18036442



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 17598453 gatctgggctagcaattgct 17598472
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 18378530 gatctgggctagcaattgct 18378511
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 19261407 gatctgggctagcaattgct 19261426



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 109     gatctgggctagcaattgct 128
               ||||||||||||||||||||
Sbjct: 7158010 gatctgggctagcaattgct 7157991



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    gatctgggctagcaattgct 128
              ||||||||||||||||||||
Sbjct: 614579 gatctgggctagcaattgct 614560
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 23155275 gatctgggctagcaattgct 23155256



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 20325076 gatctgggctagcaattgct 20325095



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 20101271 gatctgggctagcaattgct 20101252



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 109     gatctgggctagcaattgct 128
               ||||||||||||||||||||
Sbjct: 2816957 gatctgggctagcaattgct 2816976
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 26872613 gatctgggctagcaattgct 26872632



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 19625982 gatctgggctagcaattgct 19625963



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 222     gctcgccatcgcatgcactc 241
               ||||||||||||||||||||
Sbjct: 7627078 gctcgccatcgcatgcactc 7627059



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 109     gatctgggctagcaattgct 128
               ||||||||||||||||||||
Sbjct: 3842870 gatctgggctagcaattgct 3842851
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 22466224 gatctgggctagcaattgct 22466243



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 109     gatctgggctagcaattgct 128
               ||||||||||||||||||||
Sbjct: 3823452 gatctgggctagcaattgct 3823471
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 35952711 gatctgggctagcaattgct 35952730



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 33196728 gatctgggctagcaattgct 33196747



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 21187029 gatctgggctagcaattgct 21187048



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 18024039 gatctgggctagcaattgct 18024058
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 35755416 gatctgggctagcaattgct 35755397
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 29368512 gatctgggctagcaattgct 29368493
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>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete
              sequence
          Length = 144487

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    gatctgggctagcaattgct 128
              ||||||||||||||||||||
Sbjct: 138337 gatctgggctagcaattgct 138318
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 56      gcccgaagatgtatccgagcctgc 79
               |||||||||||| |||||||||||
Sbjct: 8748626 gcccgaagatgtctccgagcctgc 8748603
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>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete
             sequence
          Length = 139823

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 17090 gatctgggctagcaattgct 17071
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>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0692C11
          Length = 169562

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    gatctgggctagcaattgct 128
              ||||||||||||||||||||
Sbjct: 147375 gatctgggctagcaattgct 147356
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>dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0510F09
          Length = 138277

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 63574 gatctgggctagcaattgct 63555
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>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0496D04
          Length = 197358

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 81982 gatctgggctagcaattgct 81963
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>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0461F06
          Length = 147891

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 78374 gatctgggctagcaattgct 78355
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>dbj|AP005821.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0094B20
          Length = 146270

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 67589 gatctgggctagcaattgct 67570
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>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056L09
          Length = 152910

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 72824 gatctgggctagcaattgct 72843
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>dbj|AP005740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0015A04
          Length = 152058

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 80106 gatctgggctagcaattgct 80125
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>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1381_H04
          Length = 130961

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 10115 gatctgggctagcaattgct 10096
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>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0592C05
          Length = 150478

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    gatctgggctagcaattgct 128
              ||||||||||||||||||||
Sbjct: 110089 gatctgggctagcaattgct 110070
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>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0503D09
          Length = 144443

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 21204 gatctgggctagcaattgct 21223
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>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0580A11
          Length = 174673

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    gatctgggctagcaattgct 128
              ||||||||||||||||||||
Sbjct: 169326 gatctgggctagcaattgct 169307
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>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041J06
          Length = 138157

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 64632 gatctgggctagcaattgct 64613
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>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1149_C12
          Length = 120743

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 26131 gatctgggctagcaattgct 26112
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>dbj|AB179765.1| Cucumber mosaic virus RNA 2 segment, complete sequence
          Length = 3046

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  acctccccttcctaatctcc 266
            ||||||||||||||||||||
Sbjct: 2750 acctccccttcctaatctcc 2769
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>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1188_F05
          Length = 117045

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 47817 gatctgggctagcaattgct 47798
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>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0477F03
          Length = 176120

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    gatctgggctagcaattgct 128
              ||||||||||||||||||||
Sbjct: 173122 gatctgggctagcaattgct 173103
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>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0407H12
          Length = 167754

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    gctcgccatcgcatgcactc 241
              ||||||||||||||||||||
Sbjct: 132488 gctcgccatcgcatgcactc 132469
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>emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F12, complete
             sequence
          Length = 84361

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 11994 gatctgggctagcaattgct 12013
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>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete
              sequence
          Length = 115564

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    gatctgggctagcaattgct 128
              ||||||||||||||||||||
Sbjct: 106941 gatctgggctagcaattgct 106960
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 18388583 gatctgggctagcaattgct 18388564
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 18126876 gatctgggctagcaattgct 18126857



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 17692925 gatctgggctagcaattgct 17692944
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      gatctgggctagcaattgct 128
                ||||||||||||||||||||
Sbjct: 20697626 gatctgggctagcaattgct 20697645



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 109     gatctgggctagcaattgct 128
               ||||||||||||||||||||
Sbjct: 1203358 gatctgggctagcaattgct 1203377
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>emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa0036E08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 149022

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 69253 gatctgggctagcaattgct 69272
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>emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085_G07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 121556

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gatctgggctagcaattgct 128
             ||||||||||||||||||||
Sbjct: 89424 gatctgggctagcaattgct 89405


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,180,704
Number of Sequences: 3902068
Number of extensions: 4180704
Number of successful extensions: 74759
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73980
Number of HSP's gapped (non-prelim): 779
length of query: 595
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 572
effective length of database: 17,143,297,704
effective search space: 9805966286688
effective search space used: 9805966286688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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