>emb|AJ234494.1|HVU234494 Hordeum vulgare genomic DNA fragment; clone MWG0539.rev
          Length = 344

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 369 acttctccaagtatgaactgatgcgagttctggatctggaaga 411
           |||| ||||||||| |||||||||||||| ||||||| |||||
Sbjct: 305 acttttccaagtataaactgatgcgagttttggatcttgaaga 263



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 518 atcaagaagcttcagttcttggagacactggatgtaagaaggacgaacatagag 571
           |||||||||||  | || ||||||||||||||||||||||| || || ||||||
Sbjct: 150 atcaagaagctcaaattattggagacactggatgtaagaagaaccaatatagag 97

>gb|AC137113.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0006N14, complete sequence
          Length = 155730

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 149   gaggtgaagacatgccatacgcatggcatgatgctggagtt 189
             ||||||||||||||||| || || ||||||||||| |||||
Sbjct: 66180 gaggtgaagacatgccaaactcacggcatgatgcttgagtt 66140

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 149      gaggtgaagacatgccatacgcatggcatgatgctggagtt 189
                ||||||||||||||||| || || ||||||||||| |||||
Sbjct: 15210547 gaggtgaagacatgccaaactcacggcatgatgcttgagtt 15210507

>dbj|AK064471.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-H05, full
            insert sequence
          Length = 1629

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 149  gaggtgaagacatgccatacgcatggcatgatgctggagtt 189
            ||||||||||||||||| || || ||||||||||| |||||
Sbjct: 1034 gaggtgaagacatgccaaactcacggcatgatgcttgagtt 994

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 149      gaggtgaagacatgccatacgcatggcatgatgctggagtt 189
                ||||||||||||||||| || || ||||||||||| |||||
Sbjct: 15292046 gaggtgaagacatgccaaactcacggcatgatgcttgagtt 15292006

>emb|BX537254.7| Human DNA sequence from clone RP6-74O6 on chromosome 1 Contains the 3'
              end of the putative G-protein coupled receptor (SH120), a
              novel gene and four CpG islands, complete sequence
          Length = 121309

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 173    ggcatgatgctggagtttgtcatc 196
              ||||||||||||||||||||||||
Sbjct: 108353 ggcatgatgctggagtttgtcatc 108376

>emb|AL356004.9| Human DNA sequence from clone RP11-94I2 on chromosome 1 Contains the 3'
             end of the gene for a novel protein similar to putative
             G-protein coupled receptor SH120, the gene for a novel
             protein similar to PDZ domain containing 1 PDZK1, a novel
             gene, a phosphodiesterase 4D interacting protein
             (myomegalin) (PDE4DIP) pseudogene and three CpG islands,
             complete sequence
          Length = 166098

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 173   ggcatgatgctggagtttgtcatc 196
             ||||||||||||||||||||||||
Sbjct: 87398 ggcatgatgctggagtttgtcatc 87421

>gb|AC025822.7| Homo sapiens chromosome 10 clone RP11-433J20, complete sequence
          Length = 220031

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 108    gtatcatccaacctattattga 129
              ||||||||||||||||||||||
Sbjct: 178275 gtatcatccaacctattattga 178254

>gb|AC089984.23| Homo sapiens 12q BAC RP11-2H8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 147638

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 513    aaaatatcaagaagcttcagtt 534
              ||||||||||||||||||||||
Sbjct: 132264 aaaatatcaagaagcttcagtt 132243

>gb|AC010364.6| Homo sapiens chromosome 5 clone CTD-2042D5, complete sequence
          Length = 163400

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 291    caaggcccagagaagtgaatga 312
              ||||||||||||||||||||||
Sbjct: 154496 caaggcccagagaagtgaatga 154517

>gb|AC006406.1|AC006406 Homo sapiens, clone hRPK.25_A_1, complete sequence
          Length = 159115

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 291  caaggcccagagaagtgaatga 312
            ||||||||||||||||||||||
Sbjct: 8350 caaggcccagagaagtgaatga 8329

>gb|AC154532.3| Mus musculus BAC clone RP23-469G7 from 14, complete sequence
          Length = 193236

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 140    aacagcacagaggtgaagaca 160
              |||||||||||||||||||||
Sbjct: 144265 aacagcacagaggtgaagaca 144285

>gb|AY109307.1| Zea mays PCO130268 mRNA sequence
          Length = 3927

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 465  tgctgctgaggtacctaagcctcggaggc 493
            |||||||||||||||| |||||| |||||
Sbjct: 3048 tgctgctgaggtacctgagcctcagaggc 3076

>ref|XM_521064.1| PREDICTED: Pan troglodytes similar to bA119E20.1 (KIAA1202 protein)
            (LOC465636), mRNA
          Length = 4572

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 281  ctgcatcatgcaaggcccag 300
            ||||||||||||||||||||
Sbjct: 1722 ctgcatcatgcaaggcccag 1741

>ref|NG_005554.2| Homo sapiens neuroblastoma breakpoint family, member 13 (pseudogene)
             (NBPF13P) on chromosome 1
          Length = 40078

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 173   ggcatgatgctggagtttgtcatc 196
             ||||| ||||||||||||||||||
Sbjct: 38995 ggcatcatgctggagtttgtcatc 38972

>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete
             sequence
          Length = 106476

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 519   tcaagaagcttcagttcttg 538
             ||||||||||||||||||||
Sbjct: 83505 tcaagaagcttcagttcttg 83486

>emb|AL592284.10| Human DNA sequence from clone RP11-640M9 on chromosome 1 Contains a
             novel gene, the 5' end of a novel gene a profilin 1 (PFN1)
             pseudogene and a CpG island, complete sequence
          Length = 170669

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 173   ggcatgatgctggagtttgtcatc 196
             |||||| |||||||||||||||||
Sbjct: 81519 ggcatggtgctggagtttgtcatc 81496

>emb|AL592207.9| Human DNA sequence from clone RP11-495P10 on chromosome 1 Contains six
              novel genes, the 3' end of a novel gene, a novel pseudogene
              and the 5' end of a novel pseudogene, complete sequence
          Length = 173090

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 173    ggcatgatgctggagtttgtcatc 196
              |||||| |||||||||||||||||
Sbjct: 101024 ggcatggtgctggagtttgtcatc 101001

>emb|AL596177.4| Human DNA sequence from clone RP11-325P15 on chromosome 1 Contains the
             5' end of an unprocessed pseudogene similar to part of a
             novel protein, a processed pseudogene similar to IGF-II
             mRNA-binding protein 2, a processed pseudogene similar to
             Sjogren syndrome antigen B (autoantigen La)(SSB) and thre
             CpG islands, complete sequence
          Length = 91084

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 173   ggcatgatgctggagtttgtcatc 196
             ||||| ||||||||||||||||||
Sbjct: 44445 ggcatcatgctggagtttgtcatc 44468

>emb|AL451043.14| Human DNA sequence from clone RP11-301M17 on chromosome 1 Contains
            two novel pseudogenes (MGC48637), the 3' end of a novel
            gene and four CpG islands, complete sequence
          Length = 52389

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 173  ggcatgatgctggagtttgtcatc 196
            |||||| |||||||||||||||||
Sbjct: 2388 ggcatggtgctggagtttgtcatc 2411

>emb|AL356479.12| Human DNA sequence from clone RP11-48A6 on chromosome 1p21.3-22.3
            Contains the 5' end of a novel gene, complete sequence
          Length = 128142

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  tctgacaactttcttacctt 228
            ||||||||||||||||||||
Sbjct: 5685 tctgacaactttcttacctt 5704

>emb|AL121865.7|HSA119E20 Human DNA sequence from clone RP11-119E20 on chromosome Xp11.21-11.23
             Contains the 3' end of gene KIAA1202, complete sequence
          Length = 156413

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   ctgcatcatgcaaggcccag 300
             ||||||||||||||||||||
Sbjct: 63670 ctgcatcatgcaaggcccag 63689

>ref|XM_791591.1| PREDICTED: Strongylocentrotus purpuratus similar to protein tyrosine
            phosphatase, non-receptor type 23 (LOC592049), partial
            mRNA
          Length = 3821

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  gccatctcaagttggtatgc 454
            ||||||||||||||||||||
Sbjct: 3501 gccatctcaagttggtatgc 3520

>ref|NM_020717.1| Homo sapiens KIAA1202 protein (KIAA1202), mRNA
          Length = 6014

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 ctgcatcatgcaaggcccag 300
           ||||||||||||||||||||
Sbjct: 671 ctgcatcatgcaaggcccag 690

>gb|AC154127.2| Ornithorhynchus anatinus BAC clone OABb-20A1 from chromosome unknown,
              complete sequence
          Length = 188107

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    aggcccagagaagtgaatga 312
              ||||||||||||||||||||
Sbjct: 186837 aggcccagagaagtgaatga 186856

>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    tgctccgcccctacccagca 263
              ||||||||||||||||||||
Sbjct: 693689 tgctccgcccctacccagca 693708

>gb|AC110760.3| Homo sapiens BAC clone RP11-44F21 from 4, complete sequence
          Length = 171632

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 539    gagacactggatgtaagaag 558
              ||||||||||||||||||||
Sbjct: 101105 gagacactggatgtaagaag 101124

>gb|AC104447.2| Homo sapiens chromosome 3 clone RP11-447D11, complete sequence
          Length = 202544

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     ccagctgttttgataagcta 97
              ||||||||||||||||||||
Sbjct: 123953 ccagctgttttgataagcta 123972

>gb|AY044234.1| Homo sapiens SHAP-A (SHAP) mRNA, partial cds, alternatively spliced
          Length = 2624

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 ctgcatcatgcaaggcccag 300
           ||||||||||||||||||||
Sbjct: 752 ctgcatcatgcaaggcccag 771

>gb|AC137783.3| Homo sapiens chromosome 16 clone RP11-124P23, complete sequence
          Length = 198742

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 173    ggcatgatgctggagtttgtcatc 196
              |||||| |||||||||||||||||
Sbjct: 197128 ggcatggtgctggagtttgtcatc 197151

>gb|AC109333.28| Homo sapiens chromosome 17, clone RP11-115H24, complete sequence
          Length = 181825

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   aggcccagagaagtgaatga 312
             ||||||||||||||||||||
Sbjct: 45450 aggcccagagaagtgaatga 45431

>gb|AC024901.29| Homo sapiens 12 BAC RP11-684M17 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 129638

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 143  agcacagaggtgaagacatg 162
            ||||||||||||||||||||
Sbjct: 4066 agcacagaggtgaagacatg 4047

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 348     agacgcacccatcaatccta 367
               ||||||||||||||||||||
Sbjct: 1967361 agacgcacccatcaatccta 1967342

>gb|U22461.1|HPU22461 Human papillomavirus type 70 E6 protein (E6), E7 protein (E7), and
           L1 protein (L1) genes, complete cds
          Length = 3283

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 107 agtatcatccaacctattat 126
           ||||||||||||||||||||
Sbjct: 412 agtatcatccaacctattat 393

>gb|AC164652.3| Ornithorhynchus anatinus BAC clone OABb-566A1 from chromosome unknown,
              complete sequence
          Length = 145427

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    aggcccagagaagtgaatga 312
              ||||||||||||||||||||
Sbjct: 115275 aggcccagagaagtgaatga 115294

>gb|AC023481.6| Homo sapiens chromosome 3 clone RP11-424H6 map 3p, complete sequence
          Length = 184065

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   cagcacagaggtgaagacat 161
             ||||||||||||||||||||
Sbjct: 33330 cagcacagaggtgaagacat 33311

>dbj|AB033028.1| Homo sapiens mRNA for KIAA1202 protein, partial cds
          Length = 6014

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 ctgcatcatgcaaggcccag 300
           ||||||||||||||||||||
Sbjct: 671 ctgcatcatgcaaggcccag 690


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,395,687
Number of Sequences: 3902068
Number of extensions: 4395687
Number of successful extensions: 77884
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77690
Number of HSP's gapped (non-prelim): 194
length of query: 571
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 548
effective length of database: 17,143,297,704
effective search space: 9394527141792
effective search space used: 9394527141792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)