ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags22l16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104879.1| Zea mays PCO135342 mRNA sequence Length = 916 Score = 434 bits (219), Expect = e-118 Identities = 303/331 (91%) Strand = Plus / Plus Query: 85 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 144 |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 87 ccatgacgttcaagcggaggaacggcggacgcaacaagcacgggcgcggccacgtcaagt 146 Query: 145 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 204 |||| |||||||||||||||||||||||||| || ||||| |||||||||||||| |||| Sbjct: 147 acatacgctgctccaactgcgccaagtgctgtccaaaggataaggctatcaagcggttct 206 Query: 205 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 264 |||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 207 tggtgaggaacattgttgagcaggctgctgtgagggacgtgcaggaggcttgtgtgcatg 266 Query: 265 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 324 ||||||||||||| ||||| |||| || ||||| || |||||||| || || || |||| Sbjct: 267 atggatatgttcttcccaaattgtacgcaaaggttcatcactgtgtctcatgcgcaatcc 326 Query: 325 atgctcacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagc 384 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 327 atgcgcacattgtccgtgtccgctctcgtgagaacaggaggaaccgtgagcccccgcagc 386 Query: 385 gtttcaggcgcagggacgacggccctaggcc 415 ||||||||||| |||| || ||||| ||||| Sbjct: 387 gtttcaggcgccgggatgatggcccaaggcc 417
>dbj|AK061933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D01, full insert sequence Length = 664 Score = 270 bits (136), Expect = 4e-69 Identities = 271/316 (85%) Strand = Plus / Plus Query: 85 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 144 ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 50 ccatgaccttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagt 109 Query: 145 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 204 |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 110 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggccatcaagaggttcc 169 Query: 205 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 264 |||||||||||| || |||||||| || | || ||||| |||||||| || || |||| Sbjct: 170 aggtgaggaacatcgtcgagcaggcggccatcagggatgtccaggaggcgtgcgtccatg 229 Query: 265 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 324 | ||||| || ||||| |||||||| |||||||| || ||||| || || || ||||||| Sbjct: 230 acggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatcc 289 Query: 325 atgctcacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagc 384 | || ||||| ||||||||||||||||| |||||| | ||| |||| ||| ||| || Sbjct: 290 acgcccacatcgtccgtgtccgctcccgcgagaaccgcagggaccgcaggccgccggaga 349 Query: 385 gtttcaggcgcaggga 400 | |||||||||||||| Sbjct: 350 ggttcaggcgcaggga 365
>dbj|AK119797.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-H04, full insert sequence Length = 616 Score = 270 bits (136), Expect = 4e-69 Identities = 271/316 (85%) Strand = Plus / Plus Query: 85 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 144 ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 50 ccatgaccttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagt 109 Query: 145 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 204 |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 110 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggccatcaagaggttcc 169 Query: 205 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 264 |||||||||||| || |||||||| || | || ||||| |||||||| || || |||| Sbjct: 170 aggtgaggaacatcgtcgagcaggcggccatcagggatgtccaggaggcgtgcgtccatg 229 Query: 265 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 324 | ||||| || ||||| |||||||| |||||||| || ||||| || || || ||||||| Sbjct: 230 acggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatcc 289 Query: 325 atgctcacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagc 384 | || ||||| ||||||||||||||||| |||||| | ||| |||| ||| ||| || Sbjct: 290 acgcccacatcgtccgtgtccgctcccgcgagaaccgcagggaccgcaggccgccggaga 349 Query: 385 gtttcaggcgcaggga 400 | |||||||||||||| Sbjct: 350 ggttcaggcgcaggga 365
>dbj|AK119683.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-A02, full insert sequence Length = 641 Score = 270 bits (136), Expect = 4e-69 Identities = 271/316 (85%) Strand = Plus / Plus Query: 85 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 144 ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 51 ccatgaccttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagt 110 Query: 145 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 204 |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 111 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggccatcaagaggttcc 170 Query: 205 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 264 |||||||||||| || |||||||| || | || ||||| |||||||| || || |||| Sbjct: 171 aggtgaggaacatcgtcgagcaggcggccatcagggatgtccaggaggcgtgcgtccatg 230 Query: 265 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 324 | ||||| || ||||| |||||||| |||||||| || ||||| || || || ||||||| Sbjct: 231 acggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatcc 290 Query: 325 atgctcacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagc 384 | || ||||| ||||||||||||||||| |||||| | ||| |||| ||| ||| || Sbjct: 291 acgcccacatcgtccgtgtccgctcccgcgagaaccgcagggaccgcaggccgccggaga 350 Query: 385 gtttcaggcgcaggga 400 | |||||||||||||| Sbjct: 351 ggttcaggcgcaggga 366
>dbj|AK098982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091A22, full insert sequence Length = 620 Score = 270 bits (136), Expect = 4e-69 Identities = 271/316 (85%) Strand = Plus / Plus Query: 85 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 144 ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 52 ccatgaccttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagt 111 Query: 145 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 204 |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 112 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggccatcaagaggttcc 171 Query: 205 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 264 |||||||||||| || |||||||| || | || ||||| |||||||| || || |||| Sbjct: 172 aggtgaggaacatcgtcgagcaggcggccatcagggatgtccaggaggcgtgcgtccatg 231 Query: 265 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 324 | ||||| || ||||| |||||||| |||||||| || ||||| || || || ||||||| Sbjct: 232 acggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatcc 291 Query: 325 atgctcacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagc 384 | || ||||| ||||||||||||||||| |||||| | ||| |||| ||| ||| || Sbjct: 292 acgcccacatcgtccgtgtccgctcccgcgagaaccgcagggaccgcaggccgccggaga 351 Query: 385 gtttcaggcgcaggga 400 | |||||||||||||| Sbjct: 352 ggttcaggcgcaggga 367
>ref|XM_475416.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 585 Score = 262 bits (132), Expect = 1e-66 Identities = 264/308 (85%) Strand = Plus / Plus Query: 93 ttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgc 152 |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 181 ttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagtacatccgc 240 Query: 153 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 212 |||||||||||||||||||||||||||||||||||||| |||||| | ||| ||||||| Sbjct: 241 tgctccaactgcgccaagtgctgccccaaggacaaggccatcaagaggttccaggtgagg 300 Query: 213 aacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatgatggatat 272 ||||| || |||||||| || | || ||||| |||||||| || || ||||| ||||| Sbjct: 301 aacatcgtcgagcaggcggccatcagggatgtccaggaggcgtgcgtccatgacggatac 360 Query: 273 gttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatccatgctcac 332 || ||||| |||||||| |||||||| || ||||| || || || |||||||| || ||| Sbjct: 361 gtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatccacgcccac 420 Query: 333 attgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagcgtttcagg 392 || ||||||||||||||||| |||||| | ||| |||| ||| ||| || | |||||| Sbjct: 421 atcgtccgtgtccgctcccgcgagaaccgcagggaccgcaggccgccggagaggttcagg 480 Query: 393 cgcaggga 400 |||||||| Sbjct: 481 cgcaggga 488
>dbj|AK121584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037F24, full insert sequence Length = 947 Score = 262 bits (132), Expect = 1e-66 Identities = 270/316 (85%) Strand = Plus / Plus Query: 85 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 144 ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 51 ccatgaccttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagt 110 Query: 145 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 204 |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 111 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggccatcaagaggttcc 170 Query: 205 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 264 |||||||||||| || |||||||| || | || ||||| |||||||| || || |||| Sbjct: 171 aggtgaggaacatcgtcgagcaggcggccatcagggatgtccaggaggcgtgcgtccatg 230 Query: 265 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 324 | ||||| || ||||| |||||||| |||||||| || ||||| || || || ||||||| Sbjct: 231 acggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatcc 290 Query: 325 atgctcacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagc 384 | || ||||| |||||||||||||||| |||||| | ||| |||| ||| ||| || Sbjct: 291 acgcccacatcatccgtgtccgctcccgcgagaaccgcagggaccgcaggccgccggaga 350 Query: 385 gtttcaggcgcaggga 400 | |||||||||||||| Sbjct: 351 ggttcaggcgcaggga 366
>dbj|AK119693.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-C03, full insert sequence Length = 618 Score = 254 bits (128), Expect = 3e-64 Identities = 269/316 (85%) Strand = Plus / Plus Query: 85 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 144 ||||||| |||||||| ||||||||||||||||||| ||| |||||||||||||| |||| Sbjct: 50 ccatgaccttcaagcgcaggaacggcggccgcaacaggcatggccgcggccatgtgaagt 109 Query: 145 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 204 |||||||||||||||||||||||||||||||||||||||||||||| | |||| | ||| Sbjct: 110 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggccaccaagaggttcc 169 Query: 205 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 264 |||||||||||| || |||||||| || | || ||||| |||||||| || || |||| Sbjct: 170 aggtgaggaacatcgtcgagcaggcggccatcagggatgtccaggaggcgtgcgtccatg 229 Query: 265 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 324 | ||||| || ||||| |||||||| |||||||| || ||||| || || || ||||||| Sbjct: 230 acggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatcc 289 Query: 325 atgctcacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagc 384 | || ||||| ||||||||||||||||| |||||| | ||| |||| ||| ||| || Sbjct: 290 acgcccacatcgtccgtgtccgctcccgcgagaaccgcagggaccgcaggccgccggaga 349 Query: 385 gtttcaggcgcaggga 400 | |||||||||||||| Sbjct: 350 ggttcaggcgcaggga 365
>dbj|D38011.1|RICRPS31 Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein S31, complete cds Length = 552 Score = 252 bits (127), Expect = 1e-63 Identities = 229/263 (87%) Strand = Plus / Plus Query: 108 ggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgcc 167 |||||||||| ||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct: 72 ggcggccgcatcaagcacggtcgcgggcacgtcaagtacatccgctgctccaactgcgcc 131 Query: 168 aagtgctgccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggagcag 227 |||||||| |||||||||||||| |||||| | || |||||||||||| ||||||||| Sbjct: 132 aagtgctgtcccaaggacaaggcgatcaagaggtttcaggtgaggaacatcgtggagcag 191 Query: 228 gctgctgtgagagatgtgcaggaggcttgtgtgcatgatggatatgttctccccaagctg 287 | || | || || || ||||||| || ||||| |||||||| |||||||||||||| Sbjct: 192 gtcgccatcagggacgtccaggaggggtgcgtgcacgatggatacgttctccccaagctt 251 Query: 288 tatgccaaggtgcaccactgtgtttcttgtgccatccatgctcacattgtccgtgtccgc 347 || ||||||||||| |||||||| || ||||| |||||||||||||| |||||||||||| Sbjct: 252 tacgccaaggtgcatcactgtgtgtcctgtgcaatccatgctcacatcgtccgtgtccgc 311 Query: 348 tcccgtgagaacaggaggaaccg 370 |||||||||||| ||||| |||| Sbjct: 312 tcccgtgagaaccggagggaccg 334
>gb|AY106241.1| Zea mays PCO086893 mRNA sequence Length = 791 Score = 206 bits (104), Expect = 6e-50 Identities = 248/296 (83%) Strand = Plus / Plus Query: 105 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 |||||||||||||||||||| |||||||| || |||||||||||||| ||||| |||||| Sbjct: 140 aacggcggccgcaacaagcatggccgcggtcacgtcaagtacatccggtgctcaaactgc 199 Query: 165 gccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggag 224 |||||||||||||||||||||||||| |||||| | || |||||||||||| ||||| Sbjct: 200 gccaagtgctgccccaaggacaaggcgatcaagaggtttcaggtgaggaacatcgtggaa 259 Query: 225 caggctgctgtgagagatgtgcaggaggcttgtgtgcatgatggatatgttctccccaag 284 ||||| || | || || || ||||| || || || ||||||| || || ||||| ||| Sbjct: 260 caggcggccatcagggacgtccaggaagcatgcgtctatgatggctacgtcctcccgaag 319 Query: 285 ctgtatgccaaggtgcaccactgtgtttcttgtgccatccatgctcacattgtccgtgtc 344 ||||| ||||||||||||||||| || || || || ||||| |||||||| ||||| ||| Sbjct: 320 ctgtacgccaaggtgcaccactgcgtctcgtgcgcgatccacgctcacatcgtccgcgtc 379 Query: 345 cgctcccgtgagaacaggaggaaccgtgagcccccgcagcgtttcaggcgcaggga 400 || ||||||||||| | ||| |||| |||| ||| |||| |||||||||||||| Sbjct: 380 cgatcccgtgagaagcgcagggaccgcaagccgccggagcgcttcaggcgcaggga 435
>gb|BT016216.1| Zea mays clone Contig49 mRNA sequence Length = 749 Score = 178 bits (90), Expect = 1e-41 Identities = 237/286 (82%) Strand = Plus / Minus Query: 115 gcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgccaagtgct 174 |||||||||| |||||||| || |||||||||||||| ||||| |||||||||||||||| Sbjct: 749 gcaacaagcatggccgcggtcacgtcaagtacatccggtgctcaaactgcgccaagtgct 690 Query: 175 gccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctg 234 |||||||||||||||| |||||| | || |||||||||||| ||||| ||||| || Sbjct: 689 gccccaaggacaaggcgatcaagaggtttcaggtgaggaacatcgtggaacaggcggcca 630 Query: 235 tgagagatgtgcaggaggcttgtgtgcatgatggatatgttctccccaagctgtatgcca 294 | || || || ||||| || || || ||||||| | || ||||| |||||||| |||| Sbjct: 629 tcagggacgtccaggaagcatgcgtctatgatggttccgtcctcccgaagctgtacgcca 570 Query: 295 aggtgcaccactgtgtttcttgtgccatccatgctcacattgtccgtgtccgctcccgtg 354 ||||||||||||| || || || || ||||| |||||||| ||||| ||||| ||||||| Sbjct: 569 aggtgcaccactgcgtctcgtgcgcgatccacgctcacatcgtccgcgtccgatcccgtg 510 Query: 355 agaacaggaggaaccgtgagcccccgcagcgtttcaggcgcaggga 400 |||| | ||| |||| |||| ||| |||| |||||||||||||| Sbjct: 509 agaagcgcagggaccgcaagccgccggagcgcttcaggcgcaggga 464
>gb|AF457935.1| Zea mays clone cho1c.pk003.k1, mRNA sequence Length = 554 Score = 174 bits (88), Expect = 2e-40 Identities = 217/261 (83%) Strand = Plus / Plus Query: 85 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 144 ||||||| |||||||| | |||||||||||||||||||| |||||||| || ||||||| Sbjct: 27 ccatgaccttcaagcgccgcaacggcggccgcaacaagcatggccgcggtcacgtcaagt 86 Query: 145 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 204 ||||||| ||||| |||||||||||||||||||||||||||||||| |||||| | || Sbjct: 87 acatccggtgctcaaactgcgccaagtgctgccccaaggacaaggcgatcaagaggtttc 146 Query: 205 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 264 |||||||||||| ||||| ||||| || | || || || ||||| || || || || Sbjct: 147 aggtgaggaacatcgtggaacaggcggccatcagggacgtccaggaagcatgcgtctatn 206 Query: 265 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 324 |||| || || ||||| |||||||| ||||||||||||||||| || || || || || | Sbjct: 207 atggntacgtcctcccgaagctgtacgccaaggtgcaccactgcgtctcgtgcgcgatnc 266 Query: 325 atgctcacattgtccgtgtcc 345 | |||||||| ||||| |||| Sbjct: 267 acgctcacatcgtccgcgtcc 287
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 157 bits (79), Expect = 5e-35 Identities = 88/91 (96%) Strand = Plus / Minus Query: 93 ttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgc 152 |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 27324 ttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagtacatccgc 27265 Query: 153 tgctccaactgcgccaagtgctgccccaagg 183 ||||||||||||||||||||||||||||||| Sbjct: 27264 tgctccaactgcgccaagtgctgccccaagg 27234 Score = 73.8 bits (37), Expect = 5e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 267 ggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatccat 326 ||||| || ||||| |||||||| |||||||| || ||||| || || || |||||||| Sbjct: 26932 ggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatccac 26873 Query: 327 gctcacattgtccgtgtccgctcccgtgagaac 359 || ||||| ||||||||||||||||| |||||| Sbjct: 26872 gcccacatcgtccgtgtccgctcccgcgagaac 26840 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 181 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggc 229 |||||||||| |||||| | ||| |||||||||||| || |||||||| Sbjct: 27113 aggacaaggccatcaagaggttccaggtgaggaacatcgtcgagcaggc 27065
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 157 bits (79), Expect = 5e-35 Identities = 88/91 (96%) Strand = Plus / Minus Query: 93 ttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgc 152 |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 23341788 ttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagtacatccgc 23341729 Query: 153 tgctccaactgcgccaagtgctgccccaagg 183 ||||||||||||||||||||||||||||||| Sbjct: 23341728 tgctccaactgcgccaagtgctgccccaagg 23341698 Score = 73.8 bits (37), Expect = 5e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 267 ggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatccat 326 ||||| || ||||| |||||||| |||||||| || ||||| || || || |||||||| Sbjct: 23341396 ggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatccac 23341337 Query: 327 gctcacattgtccgtgtccgctcccgtgagaac 359 || ||||| ||||||||||||||||| |||||| Sbjct: 23341336 gcccacatcgtccgtgtccgctcccgcgagaac 23341304 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ctgctccaactgcgccaagtg 172 ||||||||||||||||||||| Sbjct: 28291152 ctgctccaactgcgccaagtg 28291172 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 181 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggc 229 |||||||||| |||||| | ||| |||||||||||| || |||||||| Sbjct: 23341577 aggacaaggccatcaagaggttccaggtgaggaacatcgtcgagcaggc 23341529 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 gcaccactgtgtttcttgtg 318 |||||||||||||||||||| Sbjct: 25336627 gcaccactgtgtttcttgtg 25336608
>dbj|AK109021.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-B01, full insert sequence Length = 974 Score = 143 bits (72), Expect = 7e-31 Identities = 180/214 (84%), Gaps = 4/214 (1%) Strand = Plus / Plus Query: 182 ggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctgt-gagag 240 ||||||||||||||| ||||||||||||||||| ||||| ||||||||||| || ||| Sbjct: 187 ggacaaggctatcaaccgtttcttggtgaggaatattgttgagcaggctgcagtcttgag 246 Query: 241 atgtgcaggaggcttgtgtgcatgatggatatgttctccccaagctgtatgccaaggtgc 300 || |||| ||||||||||| |||||||| | ||||| || ||||||||||| ||||||| Sbjct: 247 atatgcaagaggcttgtgtacatgatggtcacgttcttcctaagctgtatgcaaaggtgc 306 Query: 301 accactgtgtttcttg---tgccatccatgctcacattgtccgtgtccgctcccgtgaga 357 | ||||| ||||| || ||| || ||||||||||||||| |||| ||||| | |||| Sbjct: 307 atcactgcgtttcatggaatgcaattcatgctcacattgtcagtgttcgctcttgcgaga 366 Query: 358 acaggaggaaccgtgagcccccgcagcgtttcag 391 |||||||||| |||||| ||||||| |||||| Sbjct: 367 acaggaggaattgtgagcttccgcagcatttcag 400 Score = 69.9 bits (35), Expect = 8e-09 Identities = 70/82 (85%), Gaps = 6/82 (7%) Strand = Plus / Plus Query: 85 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggc------catg 138 ||||||||| ||||||||||| ||||| ||||||||||||||||||||| || | Sbjct: 65 ccatgacgtggaagcggaggaatggcgggcgcaacaagcacggccgcggccgcggccacg 124 Query: 139 tcaagtacatccgctgctccaa 160 ||||||| |||||||||||||| Sbjct: 125 tcaagtagatccgctgctccaa 146
>gb|AF112440.1|AF112440 Pisum sativum ribosomal protein S26 (RPS26) mRNA, complete cds Length = 610 Score = 139 bits (70), Expect = 1e-29 Identities = 150/174 (86%), Gaps = 2/174 (1%) Strand = Plus / Plus Query: 87 atgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagtac 146 ||||| |||||||| ||||| || || || |||||||| ||||| ||||||||||||| | Sbjct: 32 atgactttcaagcgtaggaatggaggacgtaacaagcatggccgtggccatgtcaagttc 91 Query: 147 atccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcg-tttctt 205 ||||| ||||||||||||| || ||||| |||||||| ||||| |||||| | |||||| Sbjct: 92 atccgttgctccaactgcggaaaatgctgtcccaaggataaggcaatcaagagatttctt 151 Query: 206 ggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgt 259 |||||||||||||| || ||||||||||| |||||||| ||||| |||||||| Sbjct: 152 -gtgaggaacattgttgaacaggctgctgttagagatgttcaggaagcttgtgt 204
>gb|BT013046.1| Lycopersicon esculentum clone 114301F, mRNA sequence Length = 637 Score = 135 bits (68), Expect = 2e-28 Identities = 146/172 (84%) Strand = Plus / Plus Query: 87 atgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagtac 146 ||||| |||||||| |||||||| || || |||||||| || || ||||||||||||| | Sbjct: 62 atgactttcaagcgaaggaacggaggtcgtaacaagcatggacgtggccatgtcaagttc 121 Query: 147 atccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttg 206 ||||||||||| ||||||| ||| |||||||| ||||||||||| |||||| | ||| | Sbjct: 122 atccgctgctctaactgcggcaaatgctgccctaaggacaaggccatcaagagattcctt 181 Query: 207 gtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtg 258 |||||||||||||| || || |||||||| | ||||| ||||| ||||||| Sbjct: 182 gtgaggaacattgttgaacaagctgctgtacgtgatgttcaggaagcttgtg 233
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 135 bits (68), Expect = 2e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 108 ggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgcc 167 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 35147146 ggcggccgcaacaagcacggtcgcggccacgtcaagtacatccgctgctccaactgcgcc 35147205 Query: 168 aagtgctgccccaagg 183 |||||||||||||||| Sbjct: 35147206 aagtgctgccccaagg 35147221 Score = 127 bits (64), Expect = 4e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 267 ggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatccat 326 ||||| |||||||||||||| || ||||||||||| |||||||| || ||||| |||||| Sbjct: 35147587 ggatacgttctccccaagctttacgccaaggtgcatcactgtgtgtcctgtgcaatccat 35147646 Query: 327 gctcacattgtccgtgtccgctcccgtgagaacaggaggaaccg 370 |||||||| |||||||||||||||||||||||| ||||| |||| Sbjct: 35147647 gctcacatcgtccgtgtccgctcccgtgagaaccggagggaccg 35147690 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 181 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggc 229 |||||||||| |||||| | || |||||||||||| ||||||||||| Sbjct: 35147320 aggacaaggcgatcaagaggtttcaggtgaggaacatcgtggagcaggc 35147368 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ctcgcctccctcctctcccc 43 |||||||||||||||||||| Sbjct: 40621824 ctcgcctccctcctctcccc 40621805
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 135 bits (68), Expect = 2e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 108 ggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgcc 167 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 26230 ggcggccgcaacaagcacggtcgcggccacgtcaagtacatccgctgctccaactgcgcc 26289 Query: 168 aagtgctgccccaagg 183 |||||||||||||||| Sbjct: 26290 aagtgctgccccaagg 26305 Score = 127 bits (64), Expect = 4e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 267 ggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatccat 326 ||||| |||||||||||||| || ||||||||||| |||||||| || ||||| |||||| Sbjct: 26671 ggatacgttctccccaagctttacgccaaggtgcatcactgtgtgtcctgtgcaatccat 26730 Query: 327 gctcacattgtccgtgtccgctcccgtgagaacaggaggaaccg 370 |||||||| |||||||||||||||||||||||| ||||| |||| Sbjct: 26731 gctcacatcgtccgtgtccgctcccgtgagaaccggagggaccg 26774 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 181 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggc 229 |||||||||| |||||| | || |||||||||||| ||||||||||| Sbjct: 26404 aggacaaggcgatcaagaggtttcaggtgaggaacatcgtggagcaggc 26452
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 135 bits (68), Expect = 2e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 108 ggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgcc 167 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 154296 ggcggccgcaacaagcacggtcgcggccacgtcaagtacatccgctgctccaactgcgcc 154355 Query: 168 aagtgctgccccaagg 183 |||||||||||||||| Sbjct: 154356 aagtgctgccccaagg 154371 Score = 127 bits (64), Expect = 4e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 267 ggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatccat 326 ||||| |||||||||||||| || ||||||||||| |||||||| || ||||| |||||| Sbjct: 154737 ggatacgttctccccaagctttacgccaaggtgcatcactgtgtgtcctgtgcaatccat 154796 Query: 327 gctcacattgtccgtgtccgctcccgtgagaacaggaggaaccg 370 |||||||| |||||||||||||||||||||||| ||||| |||| Sbjct: 154797 gctcacatcgtccgtgtccgctcccgtgagaaccggagggaccg 154840 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 181 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggc 229 |||||||||| |||||| | || |||||||||||| ||||||||||| Sbjct: 154470 aggacaaggcgatcaagaggtttcaggtgaggaacatcgtggagcaggc 154518
>ref|NM_129621.2| Arabidopsis thaliana structural constituent of ribosome AT2G40590 mRNA, complete cds Length = 636 Score = 99.6 bits (50), Expect = 9e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 153 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 212 ||||||||||||| ||| |||||||| ||||||||||| || ||| | ||| | |||||| Sbjct: 137 tgctccaactgcggcaaatgctgccctaaggacaaggccattaagaggttcattgtgagg 196 Query: 213 aacattgtggagcaggctgctgtgagagatgtgcagga 250 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 197 aacattgtggagcaggctgctattagagatgttcagga 234
>gb|BT001026.1| Arabidopsis thaliana At2g40590/T2P4.6 mRNA, complete cds Length = 396 Score = 99.6 bits (50), Expect = 9e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 153 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 212 ||||||||||||| ||| |||||||| ||||||||||| || ||| | ||| | |||||| Sbjct: 67 tgctccaactgcggcaaatgctgccctaaggacaaggccattaagaggttcattgtgagg 126 Query: 213 aacattgtggagcaggctgctgtgagagatgtgcagga 250 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 127 aacattgtggagcaggctgctattagagatgttcagga 164
>gb|AY127000.1| Arabidopsis thaliana At2g40590/T2P4.6 mRNA, complete cds Length = 640 Score = 99.6 bits (50), Expect = 9e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 153 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 212 ||||||||||||| ||| |||||||| ||||||||||| || ||| | ||| | |||||| Sbjct: 139 tgctccaactgcggcaaatgctgccctaaggacaaggccattaagaggttcattgtgagg 198 Query: 213 aacattgtggagcaggctgctgtgagagatgtgcagga 250 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 199 aacattgtggagcaggctgctattagagatgttcagga 236
>ref|NM_129613.2| Arabidopsis thaliana structural constituent of ribosome AT2G40510 mRNA, complete cds Length = 660 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 153 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 212 ||||||||||| | ||| || ||||||||||||||||| || ||| | ||| | |||||| Sbjct: 138 tgctccaactgtggcaaatgttgccccaaggacaaggccattaagaggttcattgtgagg 197 Query: 213 aacattgtggagcaggctgctgtgagagatgtgcagga 250 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 198 aacattgtggagcaggctgctattagagatgttcagga 235
>gb|BT020291.1| Arabidopsis thaliana At2g40510 gene, complete cds Length = 417 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 153 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 212 ||||||||||| | ||| || ||||||||||||||||| || ||| | ||| | |||||| Sbjct: 82 tgctccaactgtggcaaatgttgccccaaggacaaggccattaagaggttcattgtgagg 141 Query: 213 aacattgtggagcaggctgctgtgagagatgtgcagga 250 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 142 aacattgtggagcaggctgctattagagatgttcagga 179
>gb|AY099673.1| Arabidopsis thaliana 40S ribosomal protein S26 (At2g40510) mRNA, complete cds Length = 607 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 153 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 212 ||||||||||| | ||| || ||||||||||||||||| || ||| | ||| | |||||| Sbjct: 138 tgctccaactgtggcaaatgttgccccaaggacaaggccattaagaggttcattgtgagg 197 Query: 213 aacattgtggagcaggctgctgtgagagatgtgcagga 250 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 198 aacattgtggagcaggctgctattagagatgttcagga 235
>emb|BX842037.1|CNS09Y8A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH32ZA01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 600 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 153 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 212 ||||||||||| | ||| || ||||||||||||||||| || ||| | ||| | |||||| Sbjct: 121 tgctccaactgtggcaaatgttgccccaaggacaaggccattaagaggttcattgtgagg 180 Query: 213 aacattgtggagcaggctgctgtgagagatgtgcagga 250 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 181 aacattgtggagcaggctgctattagagatgttcagga 218
>gb|AY086823.1| Arabidopsis thaliana clone 28121 mRNA, complete sequence Length = 610 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 153 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 212 ||||||||||| | ||| || ||||||||||||||||| || ||| | ||| | |||||| Sbjct: 134 tgctccaactgtggcaaatgttgccccaaggacaaggccattaagaggttcattgtgagg 193 Query: 213 aacattgtggagcaggctgctgtgagagatgtgcagga 250 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 194 aacattgtggagcaggctgctattagagatgttcagga 231
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 9e-15 Identities = 79/89 (88%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 181 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctgt-gaga 239 |||||||||||||||| ||||||||||||||||| ||||| ||||||||||| || || Sbjct: 33912238 aggacaaggctatcaaccgtttcttggtgaggaatattgttgagcaggctgcagtcttga 33912297 Query: 240 gatgtgcaggaggcttgtgtgcatgatgg 268 ||| |||| ||||||||||| |||||||| Sbjct: 33912298 gatatgcaagaggcttgtgtacatgatgg 33912326 Score = 79.8 bits (40), Expect = 9e-12 Identities = 108/130 (83%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 273 gttctccccaagctgtatgccaaggtgcaccactgtgtttcttg---tgccatccatgct 329 ||||| || ||||||||||| |||||||| ||||| ||||| || ||| || |||||| Sbjct: 33912416 gttcttcctaagctgtatgcaaaggtgcatcactgcgtttcatggaatgcaattcatgct 33912475 Query: 330 cacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagcgtttc 389 ||||||||| |||| ||||| | |||||||||||||| |||||| ||||||| |||| Sbjct: 33912476 cacattgtcagtgttcgctcttgcgagaacaggaggaattgtgagcttccgcagcatttc 33912535 Query: 390 aggcgcaggg 399 ||| |||||| Sbjct: 33912536 aggtgcaggg 33912545 Score = 63.9 bits (32), Expect = 5e-07 Identities = 61/71 (85%), Gaps = 6/71 (8%) Strand = Plus / Plus Query: 96 aagcggaggaacggcggccgcaacaagcacggccgcggcc------atgtcaagtacatc 149 ||||||||||| ||||| |||||||||||||||||||||| | |||||||| ||| Sbjct: 33911687 aagcggaggaatggcgggcgcaacaagcacggccgcggccgcggccacgtcaagtagatc 33911746 Query: 150 cgctgctccaa 160 ||||||||||| Sbjct: 33911747 cgctgctccaa 33911757
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 9e-15 Identities = 79/89 (88%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 181 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctgt-gaga 239 |||||||||||||||| ||||||||||||||||| ||||| ||||||||||| || || Sbjct: 34002710 aggacaaggctatcaaccgtttcttggtgaggaatattgttgagcaggctgcagtcttga 34002769 Query: 240 gatgtgcaggaggcttgtgtgcatgatgg 268 ||| |||| ||||||||||| |||||||| Sbjct: 34002770 gatatgcaagaggcttgtgtacatgatgg 34002798 Score = 79.8 bits (40), Expect = 9e-12 Identities = 108/130 (83%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 273 gttctccccaagctgtatgccaaggtgcaccactgtgtttcttg---tgccatccatgct 329 ||||| || ||||||||||| |||||||| ||||| ||||| || ||| || |||||| Sbjct: 34002888 gttcttcctaagctgtatgcaaaggtgcatcactgcgtttcatggaatgcaattcatgct 34002947 Query: 330 cacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagcgtttc 389 ||||||||| |||| ||||| | |||||||||||||| |||||| ||||||| |||| Sbjct: 34002948 cacattgtcagtgttcgctcttgcgagaacaggaggaattgtgagcttccgcagcatttc 34003007 Query: 390 aggcgcaggg 399 ||| |||||| Sbjct: 34003008 aggtgcaggg 34003017 Score = 63.9 bits (32), Expect = 5e-07 Identities = 61/71 (85%), Gaps = 6/71 (8%) Strand = Plus / Plus Query: 96 aagcggaggaacggcggccgcaacaagcacggccgcggcc------atgtcaagtacatc 149 ||||||||||| ||||| |||||||||||||||||||||| | |||||||| ||| Sbjct: 34002159 aagcggaggaatggcgggcgcaacaagcacggccgcggccgcggccacgtcaagtagatc 34002218 Query: 150 cgctgctccaa 160 ||||||||||| Sbjct: 34002219 cgctgctccaa 34002229
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 89.7 bits (45), Expect = 9e-15 Identities = 79/89 (88%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 181 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctgt-gaga 239 |||||||||||||||| ||||||||||||||||| ||||| ||||||||||| || || Sbjct: 145453 aggacaaggctatcaaccgtttcttggtgaggaatattgttgagcaggctgcagtcttga 145394 Query: 240 gatgtgcaggaggcttgtgtgcatgatgg 268 ||| |||| ||||||||||| |||||||| Sbjct: 145393 gatatgcaagaggcttgtgtacatgatgg 145365 Score = 79.8 bits (40), Expect = 9e-12 Identities = 108/130 (83%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 273 gttctccccaagctgtatgccaaggtgcaccactgtgtttcttg---tgccatccatgct 329 ||||| || ||||||||||| |||||||| ||||| ||||| || ||| || |||||| Sbjct: 145275 gttcttcctaagctgtatgcaaaggtgcatcactgcgtttcatggaatgcaattcatgct 145216 Query: 330 cacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagcgtttc 389 ||||||||| |||| ||||| | |||||||||||||| |||||| ||||||| |||| Sbjct: 145215 cacattgtcagtgttcgctcttgcgagaacaggaggaattgtgagcttccgcagcatttc 145156 Query: 390 aggcgcaggg 399 ||| |||||| Sbjct: 145155 aggtgcaggg 145146 Score = 63.9 bits (32), Expect = 5e-07 Identities = 61/71 (85%), Gaps = 6/71 (8%) Strand = Plus / Minus Query: 96 aagcggaggaacggcggccgcaacaagcacggccgcggcc------atgtcaagtacatc 149 ||||||||||| ||||| |||||||||||||||||||||| | |||||||| ||| Sbjct: 146004 aagcggaggaatggcgggcgcaacaagcacggccgcggccgcggccacgtcaagtagatc 145945 Query: 150 cgctgctccaa 160 ||||||||||| Sbjct: 145944 cgctgctccaa 145934
>ref|XM_470096.1| Oryza sativa (japonica cultivar-group), mRNA Length = 327 Score = 79.8 bits (40), Expect = 9e-12 Identities = 108/130 (83%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 273 gttctccccaagctgtatgccaaggtgcaccactgtgtttcttg---tgccatccatgct 329 ||||| || ||||||||||| |||||||| ||||| ||||| || ||| || |||||| Sbjct: 184 gttcttcctaagctgtatgcaaaggtgcatcactgcgtttcatggaatgcaattcatgct 243 Query: 330 cacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagcgtttc 389 ||||||||| |||| ||||| | |||||||||||||| |||||| ||||||| |||| Sbjct: 244 cacattgtcagtgttcgctcttgcgagaacaggaggaattgtgagcttccgcagcatttc 303 Query: 390 aggcgcaggg 399 ||| |||||| Sbjct: 304 aggtgcaggg 313 Score = 77.8 bits (39), Expect = 3e-11 Identities = 70/79 (88%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 182 ggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctgtga-gag 240 ||||||||||||||| ||||||||||||||||| ||||| ||||||||||| || ||| Sbjct: 102 ggacaaggctatcaaccgtttcttggtgaggaatattgttgagcaggctgcagtcttgag 161 Query: 241 atgtgcaggaggcttgtgt 259 || |||| ||||||||||| Sbjct: 162 atatgcaagaggcttgtgt 180 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 125 cggccgcggccatgtcaagtacatccgctgctccaa 160 |||||||||||| |||||||| |||||||||||||| Sbjct: 26 cggccgcggccacgtcaagtagatccgctgctccaa 61 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 108 ggcggccgcaacaagcacggccgcggcc 135 ||||| |||||||||||||||||||||| Sbjct: 3 ggcgggcgcaacaagcacggccgcggcc 30
>gb|DQ455286.1| Medicago truncatula cDNA-AFLP fragment BT11M32_219 sequence Length = 235 Score = 75.8 bits (38), Expect = 1e-10 Identities = 124/150 (82%), Gaps = 2/150 (1%) Strand = Plus / Minus Query: 111 ggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgccaag 170 ||||| ||||| || || || ||||||||||| | ||| || ||||||||||| | || Sbjct: 221 ggccgtaacaaacatggtcgtggccatgtcaaattcattcgttgctccaactgtggtaaa 162 Query: 171 tgctgccccaaggacaaggctatcaag-cgtttcttggtgaggaacattgtggagcaggc 229 ||||| ||||||||||||||||||||| ||||||| || ||||||||||| || || || Sbjct: 161 tgctgtcccaaggacaaggctatcaagaggtttctt-gttaggaacattgttgaacaagc 103 Query: 230 tgctgtgagagatgtgcaggaggcttgtgt 259 ||| || |||||||| || || |||||||| Sbjct: 102 tgcagttagagatgtacaagaagcttgtgt 73
>ref|XM_323904.1| Neurospora crassa OR74A hypothetical protein (NCU04552.1) partial mRNA Length = 360 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 110 cggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||||||||||| | ||||||||||| |||||| ||||||||||||||||||| Sbjct: 24 cggccgcaacaagaagggccgcggccacgtcaagcccatccgctgctccaactgc 78
>ref|XM_950850.1| Neurospora crassa OR74A hypothetical protein (NCU04552.1) partial mRNA Length = 360 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 110 cggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||||||||||| | ||||||||||| |||||| ||||||||||||||||||| Sbjct: 24 cggccgcaacaagaagggccgcggccacgtcaagcccatccgctgctccaactgc 78
>emb|X55637.1|NCRPSSU N. crassa mRNA for a ribosomal protein Length = 685 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 110 cggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||||||||||| | ||||||||||| |||||| ||||||||||||||||||| Sbjct: 70 cggccgcaacaagaagggccgcggccacgtcaagcccatccgctgctccaactgc 124
>gb|M95597.1|NEUCRP5A Neurospora crassa ribosomal protein (crp-5) gene, 5' end Length = 1616 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 110 cggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||||||||||| | ||||||||||| |||||| ||||||||||||||||||| Sbjct: 1358 cggccgcaacaagaagggccgcggccacgtcaagcccatccgctgctccaactgc 1412
>gb|AC002336.3| Arabidopsis thaliana chromosome 2 clone T2P4 map CIC10A06, complete sequence Length = 84675 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 181 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctgtgagag 240 |||||||||| || ||| | ||| | ||||||||||||||||||||||||||| | |||| Sbjct: 44476 aggacaaggccattaagaggttcattgtgaggaacattgtggagcaggctgctattagag 44417 Query: 241 atgtgcagga 250 |||| ||||| Sbjct: 44416 atgttcagga 44407 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 181 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctgtgagag 240 |||||||||| || ||| | ||| | ||||||||||||||||||||||||||| | |||| Sbjct: 17190 aggacaaggccattaagaggttcattgtgaggaacattgtggagcaggctgctattagag 17249 Query: 241 atgtgcagga 250 |||| ||||| Sbjct: 17250 atgttcagga 17259
>emb|BX822864.1|CNS0A737 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB69ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 610 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 174 tgccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgct 233 ||||||||||||||||| || ||| | || || || ||||||||||| |||||||||||| Sbjct: 144 tgccccaaggacaaggcgattaagagatttttcgtaaggaacattgttgagcaggctgct 203 Query: 234 gtgagagatgt 244 | |||||||| Sbjct: 204 attagagatgt 214
>gb|AF084202.1|AF084202 Medicago sativa clone MS56 unknown mRNA Length = 697 Score = 61.9 bits (31), Expect = 2e-06 Identities = 105/127 (82%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 134 ccatgtcaagtacatccgctgctccaactgcgccaagtgctgccccaaggacaaggctat 193 ||||||||| | ||| || ||||||||||| | || ||||| |||||||||||||| || Sbjct: 96 ccatgtcaaattcattcgttgctccaactgtggtaaatgctgtcccaaggacaaggcaat 155 Query: 194 caag-cgtttcttggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggagg 252 |||| ||||||| || ||||||||||| || || ||||| || |||||||| ||||| | Sbjct: 156 caagaggtttctt-gttaggaacattgttgaacaagctgcagttagagatgttcaggaag 214 Query: 253 cttgtgt 259 | ||||| Sbjct: 215 catgtgt 221
>ref|NM_115492.2| Arabidopsis thaliana structural constituent of ribosome AT3G56340 mRNA, complete cds Length = 638 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 168 aagtgctgccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggagcag 227 ||||| ||||||||||||||||| || ||| | || | || ||||||||||| |||||| Sbjct: 155 aagtgttgccccaaggacaaggcgattaagagatttatcgtaaggaacattgttgagcag 214 Query: 228 gctgctgtgagagatgt 244 |||||| | |||||||| Sbjct: 215 gctgctattagagatgt 231
>ref|XM_658227.1| Aspergillus nidulans FGSC A4 40S ribosomal protein S26E (AN5715.2), mRNA Length = 360 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 110 cggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgc 166 ||||||||||||| ||||||||||||| || ||| | | ||||||||||||||||| Sbjct: 24 cggccgcaacaagaacggccgcggccacgttaagcccgtgcgctgctccaactgcgc 80
>ref|XM_745333.1| Aspergillus fumigatus Af293 ribosomal protein S26e (Afu1g06770) partial mRNA Length = 360 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 114 cgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgc 166 ||||||||| ||||||||||||| |||||| | | ||||||||||||||||| Sbjct: 28 cgcaacaagaacggccgcggccacgtcaagcccgtgcgctgctccaactgcgc 80
>gb|AY133664.1| Arabidopsis thaliana AT3g56340/F18O21_300 mRNA, complete cds Length = 393 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 168 aagtgctgccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggagcag 227 ||||| ||||||||||||||||| || ||| | || | || ||||||||||| |||||| Sbjct: 82 aagtgttgccccaaggacaaggcgattaagagatttatcgtaaggaacattgttgagcag 141 Query: 228 gctgctgtgagagatgt 244 |||||| | |||||||| Sbjct: 142 gctgctattagagatgt 158
>gb|AY039886.1| Arabidopsis thaliana AT3g56340/F18O21_300 mRNA, complete cds Length = 602 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 168 aagtgctgccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggagcag 227 ||||| ||||||||||||||||| || ||| | || | || ||||||||||| |||||| Sbjct: 155 aagtgttgccccaaggacaaggcgattaagagatttatcgtaaggaacattgttgagcag 214 Query: 228 gctgctgtgagagatgt 244 |||||| | |||||||| Sbjct: 215 gctgctattagagatgt 231
>gb|AF079900.1|AF079900 Streptomyces rimosus tetracycline efflux protein (otrB) gene, complete cds Length = 1947 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 474 ggcgctggcgctgttcctggcgcccctgct 503 |||||||||||||||||||| ||||||||| Sbjct: 708 ggcgctggcgctgttcctggtgcccctgct 737
>gb|AF061335.1|AF061335 Streptomyces rimosus oxytetracycline exporter (otrB) gene, complete cds Length = 1611 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 474 ggcgctggcgctgttcctggcgcccctgct 503 |||||||||||||||||||| ||||||||| Sbjct: 588 ggcgctggcgctgttcctggtgcccctgct 617
>gb|M20370.1|STMTETA S.rimosus tetracycline-resistance determinant (tet347) gene, complete cds Length = 2052 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 474 ggcgctggcgctgttcctggcgcccctgct 503 |||||||||||||||||||| ||||||||| Sbjct: 815 ggcgctggcgctgttcctggtgcccctgct 844
>gb|AY231816.1| Drosophila yakuba clone yak-em_RpS26 mRNA sequence Length = 342 Score = 50.1 bits (25), Expect = 0.008 Identities = 76/93 (81%) Strand = Plus / Plus Query: 105 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||| || |||||||||||| |||||||||||| ||| | | || ||| |||||||| Sbjct: 19 aacggaggacgcaacaagcacaaccgcggccatgtgaagcccgtgcgttgcaccaactgc 78 Query: 165 gccaagtgctgccccaaggacaaggctatcaag 197 ||| ||| ||||||||||||||||||||| Sbjct: 79 gcccgctgcgtgcccaaggacaaggctatcaag 111
>gb|AC117596.6| Mus musculus chromosome 6, clone RP23-392K24, complete sequence Length = 233811 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 214 acattgtggagcaggctgctgtgag 238 ||||||||||||||||||||||||| Sbjct: 61024 acattgtggagcaggctgctgtgag 61048
>gb|DQ413194.1| Acyrthosiphon pisum isolate WHAP0011 putative ribosomal protein S26 mRNA, complete cds Length = 357 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 298 tgcaccactgtgtttcttgtgccatccat 326 ||||| ||||||||||||||||||||||| Sbjct: 212 tgcactactgtgtttcttgtgccatccat 240
>emb|BX822379.1|CNS0A757 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB32ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 571 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 168 aagtgctgccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggagcag 227 ||||| ||||||||||||||||| || ||| | || | || ||| ||||||| |||||| Sbjct: 128 aagtgttgccccaaggacaaggcgattaagagatttatcgtaaggcacattgttgagcag 187 Query: 228 gctgctgtgagagatgt 244 |||||| | |||||||| Sbjct: 188 gctgctattagagatgt 204
>emb|AJ719518.1| Gallus gallus mRNA for hypothetical protein, clone 2p17 Length = 463 Score = 48.1 bits (24), Expect = 0.031 Identities = 60/72 (83%) Strand = Plus / Plus Query: 126 ggccgcggccatgtcaagtacatccgctgctccaactgcgccaagtgctgccccaaggac 185 ||||||||||| ||| || |||||||||| ||||||||||| ||| |||||||||| Sbjct: 65 ggccgcggccacgtccagcccatccgctgcaccaactgcgcccgctgcgtccccaaggac 124 Query: 186 aaggctatcaag 197 || || |||||| Sbjct: 125 aaagccatcaag 136
>emb|CT963111.1| Medicago truncatula chromosome 5 clone mth2-43h1, COMPLETE SEQUENCE Length = 120939 Score = 48.1 bits (24), Expect = 0.031 Identities = 68/80 (85%), Gaps = 2/80 (2%) Strand = Plus / Plus Query: 181 aggacaaggctatcaagcg-tttcttggtgaggaacattgtggagcaggctgctgtgaga 239 ||||||||||||||||| | ||||||| | ||||||||||| || || ||||| || ||| Sbjct: 4662 aggacaaggctatcaagaggtttcttgtt-aggaacattgttgaacaagctgcagttaga 4720 Query: 240 gatgtgcaggaggcttgtgt 259 ||||| || || |||||||| Sbjct: 4721 gatgtacaagaagcttgtgt 4740
>emb|CT571263.1| Medicago truncatula chromosome 5 clone mte1-7c20, COMPLETE SEQUENCE Length = 127003 Score = 48.1 bits (24), Expect = 0.031 Identities = 68/80 (85%), Gaps = 2/80 (2%) Strand = Plus / Minus Query: 181 aggacaaggctatcaagcg-tttcttggtgaggaacattgtggagcaggctgctgtgaga 239 ||||||||||||||||| | ||||||| | ||||||||||| || || ||||| || ||| Sbjct: 7736 aggacaaggctatcaagaggtttcttgtt-aggaacattgttgaacaagctgcagttaga 7678 Query: 240 gatgtgcaggaggcttgtgt 259 ||||| || || |||||||| Sbjct: 7677 gatgtacaagaagcttgtgt 7658
>ref|XM_368025.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07929.4) partial mRNA Length = 360 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 114 cgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||||||| | ||||||||||| |||||| |||||| ||||| |||||| Sbjct: 28 cgcaacaagaagggccgcggccacgtcaagcccatccgttgctcaaactgc 78
>ref|XM_755997.1| Ustilago maydis 521 hypothetical protein (UM04943.1) partial mRNA Length = 369 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 cccaaggacaaggctatcaagcg 199 ||||||||||||||||||||||| Sbjct: 91 cccaaggacaaggctatcaagcg 113
>ref|XM_572351.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNH01770) partial mRNA Length = 495 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 cccaaggacaaggctatcaagcg 199 ||||||||||||||||||||||| Sbjct: 93 cccaaggacaaggctatcaagcg 115
>emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, BAC clone F18O21 Length = 99492 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 210 aggaacattgtggagcaggctgctgtgagagatgt 244 ||||||||||| |||||||||||| | |||||||| Sbjct: 95961 aggaacattgttgagcaggctgctattagagatgt 95927
>emb|AL163972.1|ATT5P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T5P19 Length = 101539 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 210 aggaacattgtggagcaggctgctgtgagagatgt 244 ||||||||||| |||||||||||| | |||||||| Sbjct: 3815 aggaacattgttgagcaggctgctattagagatgt 3781
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 28 cctccctcctctccccctcccgg 50 ||||||||||||||||||||||| Sbjct: 15111451 cctccctcctctccccctcccgg 15111473
>gb|AY849657.1| Magnaporthe grisea 40S ribosomal protein S26-like protein mRNA, complete cds Length = 668 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 114 cgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||||||| | ||||||||||| |||||| |||||| ||||| |||||| Sbjct: 75 cgcaacaagaagggccgcggccacgtcaagcccatccgttgctcaaactgc 125
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 28 cctccctcctctccccctcccgg 50 ||||||||||||||||||||||| Sbjct: 15065734 cctccctcctctccccctcccgg 15065756
>emb|AL844876.4|CNS08CAZ Oryza sativa chromosome 12, . BAC OSJNBa0063F10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153687 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 28 cctccctcctctccccctcccgg 50 ||||||||||||||||||||||| Sbjct: 144472 cctccctcctctccccctcccgg 144450
>emb|AL713938.2|CNS07YPK Oryza sativa chromosome 12, . BAC OJ1372_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113071 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 28 cctccctcctctccccctcccgg 50 ||||||||||||||||||||||| Sbjct: 50868 cctccctcctctccccctcccgg 50890
>ref|XM_483228.1| Oryza sativa (japonica cultivar-group), mRNA Length = 994 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 cctcgcctccctcctctccccctccc 48 ||||||||||||||||||||| |||| Sbjct: 85 cctcgcctccctcctctccccttccc 110
>gb|AY618139.1| Sterkiella histriomuscorum clone UGC1O0006_F08_F genomic sequence Length = 492 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 178 ccaaggacaaggctatcaagcgtttc 203 ||||||||||||| |||||||||||| Sbjct: 183 ccaaggacaaggccatcaagcgtttc 208
>gb|AY617796.1| Sterkiella histriomuscorum clone UGC1O0005_K14_F genomic sequence Length = 630 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 178 ccaaggacaaggctatcaagcgtttc 203 ||||||||||||| |||||||||||| Sbjct: 445 ccaaggacaaggccatcaagcgtttc 420
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 475 gcgctggcgctgttcctggcgc 496 |||||||||||||||||||||| Sbjct: 110038 gcgctggcgctgttcctggcgc 110059
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 475 gcgctggcgctgttcctggcgc 496 |||||||||||||||||||||| Sbjct: 170116 gcgctggcgctgttcctggcgc 170095
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 cctcgcctccctcctctccccctccc 48 ||||||||||||||||||||| |||| Sbjct: 24928465 cctcgcctccctcctctccccttccc 24928490 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cctcgcctccctcctctccccctcc 47 |||| |||||||||||||||||||| Sbjct: 11500226 cctcccctccctcctctccccctcc 11500202
>dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_H03 Length = 135914 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 cctcgcctccctcctctccccctccc 48 ||||||||||||||||||||| |||| Sbjct: 30180 cctcgcctccctcctctccccttccc 30205
>dbj|AK062330.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-D09, full insert sequence Length = 994 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 cctcgcctccctcctctccccctccc 48 ||||||||||||||||||||| |||| Sbjct: 85 cctcgcctccctcctctccccttccc 110
>emb|AL607039.25| Mouse DNA sequence from clone RP23-313J14 on chromosome 11, complete sequence Length = 147376 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 cctcgcctccctcctctccccctccc 48 |||| ||||||||||||||||||||| Sbjct: 19324 cctctcctccctcctctccccctccc 19349
>gb|AC123720.32| Mus musculus chromosome 10, clone RP23-413G8, complete sequence Length = 192037 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cctccctcctctccccctccc 48 ||||||||||||||||||||| Sbjct: 143961 cctccctcctctccccctccc 143941
>gb|AC148001.6| Mus musculus BAC clone RP24-82P9 from chromosome 18, complete sequence Length = 181022 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cctccctcctctccccctccc 48 ||||||||||||||||||||| Sbjct: 47114 cctccctcctctccccctccc 47134
>ref|XM_481314.1| Oryza sativa (japonica cultivar-group), mRNA Length = 258 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cctcgcctccctcctctccccctcc 47 |||| |||||||||||||||||||| Sbjct: 153 cctcccctccctcctctccccctcc 129
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 22 gcctcgcctccctcctctccccctcccgg 50 ||||| |||||||||||||| |||||||| Sbjct: 82878 gcctcccctccctcctctcctcctcccgg 82850
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ctgctccaactgcgccaagtg 172 ||||||||||||||||||||| Sbjct: 75394 ctgctccaactgcgccaagtg 75414
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 422 aggtggcccgccccgtgctggaggccctggtgg 454 |||||||||||| ||||||||| || ||||||| Sbjct: 151215 aggtggcccgccacgtgctggaagcgctggtgg 151183 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 atgacgttcaagcggaggaa 106 |||||||||||||||||||| Sbjct: 2327361 atgacgttcaagcggaggaa 2327342 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 atgacgttcaagcggaggaa 106 |||||||||||||||||||| Sbjct: 2218465 atgacgttcaagcggaggaa 2218484 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 atgacgttcaagcggaggaa 106 |||||||||||||||||||| Sbjct: 1924713 atgacgttcaagcggaggaa 1924694 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 atgacgttcaagcggaggaa 106 |||||||||||||||||||| Sbjct: 1808770 atgacgttcaagcggaggaa 1808751 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 atgacgttcaagcggaggaa 106 |||||||||||||||||||| Sbjct: 990595 atgacgttcaagcggaggaa 990576 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 atgacgttcaagcggaggaa 106 |||||||||||||||||||| Sbjct: 479958 atgacgttcaagcggaggaa 479939 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 atgacgttcaagcggaggaa 106 |||||||||||||||||||| Sbjct: 300269 atgacgttcaagcggaggaa 300250
>emb|AM040004.1| Eucinetus sp. APV-2005 mRNA for ribosomal protein S26e (rpS26e gene) Length = 348 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 273 gttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcca 325 ||||| ||||| ||||| |||||| ||||| |||| || || ||||||||||| Sbjct: 187 gttctgcccaaactgtacgccaagctgcactactgcgtgtcctgtgccatcca 239
>gb|AC156398.13| Mus musculus 6 BAC RP24-279F16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 170925 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cctccctcctctccccctccc 48 ||||||||||||||||||||| Sbjct: 136527 cctccctcctctccccctccc 136507
>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06, complete sequence Length = 129608 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 ctcgcctccctcctctccccc 44 ||||||||||||||||||||| Sbjct: 40506 ctcgcctccctcctctccccc 40526
>gb|AC158944.7| Mus musculus chromosome 5, clone RP23-260N17, complete sequence Length = 161487 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cctccctcctctccccctccc 48 ||||||||||||||||||||| Sbjct: 33476 cctccctcctctccccctccc 33456
>gb|AY118770.1| Drosophila melanogaster GH11073 full insert cDNA Length = 2355 Score = 42.1 bits (21), Expect = 1.9 Identities = 75/93 (80%) Strand = Plus / Plus Query: 105 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 1793 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 1852 Query: 165 gccaagtgctgccccaaggacaaggctatcaag 197 ||| ||| |||||||||||||| |||||| Sbjct: 1853 gcccgctgcgtgcccaaggacaaggcaatcaag 1885
>gb|AE012331.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 239 of 460 of the complete genome Length = 11445 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 451 gtggacctggtggtgcgcctgctgg 475 |||||||||| |||||||||||||| Sbjct: 7362 gtggacctggcggtgcgcctgctgg 7338
>dbj|AB226211.1| Aspergillus oryzae cDNA, contig sequence: AoEST3070 Length = 844 Score = 42.1 bits (21), Expect = 1.9 Identities = 66/81 (81%) Strand = Plus / Plus Query: 117 aacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgccaagtgctgc 176 |||||| ||||||||||||| |||| | | ||||||||||||||||| ||| | Sbjct: 115 aacaagaacggccgcggccacaccaagcccgtgcgctgctccaactgcgctcgctgcgtc 174 Query: 177 cccaaggacaaggctatcaag 197 |||||||||||||| |||||| Sbjct: 175 cccaaggacaaggccatcaag 195
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 436 gtgctggaggccctggtggacctgg 460 |||||||| |||||||||||||||| Sbjct: 668623 gtgctggacgccctggtggacctgg 668599 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 ggtggtgcgcctgctggcgc 478 |||||||||||||||||||| Sbjct: 4485645 ggtggtgcgcctgctggcgc 4485664
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 42.1 bits (21), Expect = 1.9 Identities = 66/81 (81%) Strand = Plus / Minus Query: 117 aacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgccaagtgctgc 176 |||||| ||||||||||||| |||| | | ||||||||||||||||| ||| | Sbjct: 1212974 aacaagaacggccgcggccacaccaagcccgtgcgctgctccaactgcgctcgctgcgtc 1212915 Query: 177 cccaaggacaaggctatcaag 197 |||||||||||||| |||||| Sbjct: 1212914 cccaaggacaaggccatcaag 1212894
>ref|NM_165253.1| Drosophila melanogaster Ribosomal protein S26 CG10305-RC, transcript variant C (RpS26), mRNA Length = 632 Score = 42.1 bits (21), Expect = 1.9 Identities = 75/93 (80%) Strand = Plus / Plus Query: 105 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 86 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 145 Query: 165 gccaagtgctgccccaaggacaaggctatcaag 197 ||| ||| |||||||||||||| |||||| Sbjct: 146 gcccgctgcgtgcccaaggacaaggcaatcaag 178
>ref|NM_165252.1| Drosophila melanogaster Ribosomal protein S26 CG10305-RA, transcript variant A (RpS26), mRNA Length = 658 Score = 42.1 bits (21), Expect = 1.9 Identities = 75/93 (80%) Strand = Plus / Plus Query: 105 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 112 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 171 Query: 165 gccaagtgctgccccaaggacaaggctatcaag 197 ||| ||| |||||||||||||| |||||| Sbjct: 172 gcccgctgcgtgcccaaggacaaggcaatcaag 204
>gb|AC100773.2| Homo sapiens chromosome 11, clone RP11-960D24, complete sequence Length = 199549 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cctccctcctctccccctccc 48 ||||||||||||||||||||| Sbjct: 12002 cctccctcctctccccctccc 12022
>ref|NM_078871.4| Drosophila melanogaster Ribosomal protein S26 CG10305-RB, transcript variant B (RpS26), mRNA Length = 661 Score = 42.1 bits (21), Expect = 1.9 Identities = 75/93 (80%) Strand = Plus / Plus Query: 105 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 115 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 174 Query: 165 gccaagtgctgccccaaggacaaggctatcaag 197 ||| ||| |||||||||||||| |||||| Sbjct: 175 gcccgctgcgtgcccaaggacaaggcaatcaag 207
>gb|AC139035.12| Mus musculus chromosome 5, clone RP23-348E9, complete sequence Length = 237627 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cctccctcctctccccctccc 48 ||||||||||||||||||||| Sbjct: 7547 cctccctcctctccccctccc 7567
>gb|AY069761.1| Drosophila melanogaster RE01079 full length cDNA Length = 665 Score = 42.1 bits (21), Expect = 1.9 Identities = 75/93 (80%) Strand = Plus / Plus Query: 105 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 112 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 171 Query: 165 gccaagtgctgccccaaggacaaggctatcaag 197 ||| ||| |||||||||||||| |||||| Sbjct: 172 gcccgctgcgtgcccaaggacaaggcaatcaag 204
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctgctggcgctggcgctgttc 489 ||||||||||||||||||||| Sbjct: 2550090 ctgctggcgctggcgctgttc 2550070
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 451 gtggacctggtggtgcgcctgctgg 475 |||||||||| |||||||||||||| Sbjct: 2274245 gtggacctggcggtgcgcctgctgg 2274269
>gb|AC115695.11| Mus musculus chromosome 5, clone RP24-229D18, complete sequence Length = 161430 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cctccctcctctccccctccc 48 ||||||||||||||||||||| Sbjct: 115072 cctccctcctctccccctccc 115092
>gb|AC006590.11|AC006590 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone BACR13N02, complete sequence Length = 172479 Score = 42.1 bits (21), Expect = 1.9 Identities = 75/93 (80%) Strand = Plus / Minus Query: 105 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 8997 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 8938 Query: 165 gccaagtgctgccccaaggacaaggctatcaag 197 ||| ||| |||||||||||||| |||||| Sbjct: 8937 gcccgctgcgtgcccaaggacaaggcaatcaag 8905
>gb|AC008184.4|AC008184 Drosophila melanogaster, chromosome 2L, region 36E5-36F2, BAC clone BACR04D05, complete sequence Length = 154730 Score = 42.1 bits (21), Expect = 1.9 Identities = 75/93 (80%) Strand = Plus / Minus Query: 105 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 86518 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 86459 Query: 165 gccaagtgctgccccaaggacaaggctatcaag 197 ||| ||| |||||||||||||| |||||| Sbjct: 86458 gcccgctgcgtgcccaaggacaaggcaatcaag 86426
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 ctcgcctccctcctctccccc 44 ||||||||||||||||||||| Sbjct: 4650373 ctcgcctccctcctctccccc 4650393
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 22 gcctcgcctccctcctctccccctcccgg 50 ||||| |||||||||||||| |||||||| Sbjct: 11530910 gcctcccctccctcctctcctcctcccgg 11530938
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cctcgcctccctcctctccccctcc 47 |||| |||||||||||||||||||| Sbjct: 54360 cctcccctccctcctctccccctcc 54336
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cctcgcctccctcctctccccctcc 47 |||| |||||||||||||||||||| Sbjct: 114215 cctcccctccctcctctccccctcc 114191
>gb|AE003659.2| Drosophila melanogaster chromosome 2L, section 68 of 83 of the complete sequence Length = 260027 Score = 42.1 bits (21), Expect = 1.9 Identities = 75/93 (80%) Strand = Plus / Minus Query: 105 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 25909 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 25850 Query: 165 gccaagtgctgccccaaggacaaggctatcaag 197 ||| ||| |||||||||||||| |||||| Sbjct: 25849 gcccgctgcgtgcccaaggacaaggcaatcaag 25817
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 458 tggtggtgcgcctgctggcgctggcgctg 486 ||||||| |||||||||||||||||||| Sbjct: 1717338 tggtggtcagcctgctggcgctggcgctg 1717310
>emb|CT025758.11| Mouse DNA sequence from clone RP23-385I6 on chromosome X, complete sequence Length = 138459 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 agcctcgcctccctcctctcc 41 ||||||||||||||||||||| Sbjct: 85609 agcctcgcctccctcctctcc 85629
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 22 gcctcgcctccctcctctccccctcccgg 50 ||||| |||||||||||||| |||||||| Sbjct: 11610099 gcctcccctccctcctctcctcctcccgg 11610127
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 cgctggcgctgttcctggcgc 496 ||||||||||||||||||||| Sbjct: 1721668 cgctggcgctgttcctggcgc 1721648
>gb|AC173343.1| Mus musculus BAC clone RP23-276A21 from chromosome 9, complete sequence Length = 194443 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cctccctcctctccccctccc 48 ||||||||||||||||||||| Sbjct: 133287 cctccctcctctccccctccc 133307
>emb|AL807778.10| Mouse DNA sequence from clone RP23-198G1 on chromosome 2, complete sequence Length = 203518 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cctccctcctctccccctccc 48 ||||||||||||||||||||| Sbjct: 19879 cctccctcctctccccctccc 19899
>emb|X13625.2|DMRPS26 Drosophila melanogaster mRNA for putative ribosomal protein S31 Length = 567 Score = 42.1 bits (21), Expect = 1.9 Identities = 75/93 (80%) Strand = Plus / Plus Query: 105 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 76 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 135 Query: 165 gccaagtgctgccccaaggacaaggctatcaag 197 ||| ||| |||||||||||||| |||||| Sbjct: 136 gcccgctgcgtgcccaaggacaaggcaatcaag 168
>emb|X14247.1|DMRPS31 Drosophila melanogaster gene for putative ribosomal protein S31 Length = 780 Score = 42.1 bits (21), Expect = 1.9 Identities = 75/93 (80%) Strand = Plus / Plus Query: 105 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 164 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 245 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 304 Query: 165 gccaagtgctgccccaaggacaaggctatcaag 197 ||| ||| |||||||||||||| |||||| Sbjct: 305 gcccgctgcgtgcccaaggacaaggcaatcaag 337
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 ctgctggcgctggcgctgtt 488 |||||||||||||||||||| Sbjct: 2318048 ctgctggcgctggcgctgtt 2318067
>gb|AC101689.12| Mus musculus chromosome 1, clone RP23-217C21, complete sequence Length = 189241 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 52696 ctccctcctctccccctccc 52677
>gb|AC152884.1| Pan troglodytes chromosome 17 clone RP43-O52L01 map human ortholog 17q21.33, complete sequence Length = 162327 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 gtgcaggaggcttgtgtgca 262 |||||||||||||||||||| Sbjct: 120954 gtgcaggaggcttgtgtgca 120973
>ref|XM_512683.1| PREDICTED: Pan troglodytes LOC456056 (LOC456056), mRNA Length = 995 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 ctgctggcgctggcgctgttcctg 492 |||||||||||||||||| ||||| Sbjct: 42 ctgctggcgctggcgctgctcctg 65
>gb|AC154737.3| Mus musculus BAC clone RP24-390A6 from chromosome 9, complete sequence Length = 113204 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 49220 ctccctcctctccccctccc 49201
>ref|XM_507555.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1149_C12.25 mRNA Length = 1525 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 tcgcctccctcctctccccctccc 48 ||||||||||| |||||||||||| Sbjct: 405 tcgcctccctcgtctccccctccc 428
>ref|XM_507068.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1149_C12.25 mRNA Length = 1369 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 tcgcctccctcctctccccctccc 48 ||||||||||| |||||||||||| Sbjct: 473 tcgcctccctcgtctccccctccc 496
>ref|XM_468557.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1369 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 tcgcctccctcctctccccctccc 48 ||||||||||| |||||||||||| Sbjct: 473 tcgcctccctcgtctccccctccc 496
>gb|BT019264.1| Zea mays clone Contig937.F mRNA sequence Length = 1112 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 467 gcctgctggcgctggcgctgttcctggcgccc 498 ||||||||| | |||||||| ||||||||||| Sbjct: 540 gcctgctggtggtggcgctgctcctggcgccc 509
>ref|NM_030622.6| Homo sapiens cytochrome P450, family 2, subfamily S, polypeptide 1 (CYP2S1), mRNA Length = 2657 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 ctgctggcgctggcgctgttcctg 492 |||||||||||||||||| ||||| Sbjct: 83 ctgctggcgctggcgctgctcctg 106
>gb|AC114420.11| Mus musculus chromosome 5, clone RP23-375E13, complete sequence Length = 155958 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 97026 ctccctcctctccccctccc 97045
>gb|BC059532.1| Danio rerio ribosomal protein S26, like, mRNA (cDNA clone MGC:73182 IMAGE:4786707), complete cds Length = 438 Score = 40.1 bits (20), Expect = 7.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 146 catccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaag 197 |||||||||| ||||||||||| ||| |||||| |||||||| |||||| Sbjct: 66 catccgctgcaccaactgcgcccgctgcgtccccaaagacaaggccatcaag 117
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 gcaccactgtgtttcttgtg 318 |||||||||||||||||||| Sbjct: 71231 gcaccactgtgtttcttgtg 71212
>gb|AC123746.20| Mus musculus chromosome 1, clone RP24-122E21, complete sequence Length = 160429 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 439 ctggaggccctggtggacctggtg 462 ||||||| |||||||||||||||| Sbjct: 9033 ctggagggcctggtggacctggtg 9056
>gb|AC099695.15| Mus musculus chromosome 10, clone RP23-234P12, complete sequence Length = 169161 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 168561 ctccctcctctccccctccc 168542
>gb|AC127189.4| Rattus norvegicus 1 BAC CH230-266M16 (Children's Hospital Oakland Research Institute) complete sequence Length = 222423 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 77221 ctccctcctctccccctccc 77240
>ref|XM_583780.2| PREDICTED: Bos taurus similar to beta-1,4-mannosyltransferase (LOC507210), partial mRNA Length = 1307 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 468 cctgctggcgctggcgctgttcctggcgcccctgct 503 ||||||||||||| | ||||||||| |||| ||||| Sbjct: 21 cctgctggcgctgtccctgttcctgccgccgctgct 56
>ref|NM_007734.1| Mus musculus procollagen, type IV, alpha 3 (Col4a3), mRNA Length = 7765 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 ctggaggccctggtggacctggtg 462 ||||||| |||||||||||||||| Sbjct: 1666 ctggagggcctggtggacctggtg 1643
>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence Length = 203478 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 ctggaggccctggtggacctggtg 462 ||||||| |||||||||||||||| Sbjct: 24250 ctggagggcctggtggacctggtg 24227
>gb|AY657573.1| Synthetic construct Peudomonas aeruginosa clone FLH041006.01F PA0785 gene, partial cds Length = 639 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 gcgcctgctggcgctggcgc 484 |||||||||||||||||||| Sbjct: 609 gcgcctgctggcgctggcgc 628
>ref|XM_457166.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B04565g) partial mRNA Length = 360 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 298 tgcaccactgtgtttcttgtgccatcca 325 ||||| ||||||| |||||||||||||| Sbjct: 212 tgcactactgtgtctcttgtgccatcca 239
>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome 19 Length = 413528 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 ctgctggcgctggcgctgttcctg 492 |||||||||||||||||| ||||| Sbjct: 395371 ctgctggcgctggcgctgctcctg 395394
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 atgacgttcaagcggaggaa 106 |||||||||||||||||||| Sbjct: 516006 atgacgttcaagcggaggaa 515987 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 atgacgttcaagcggaggaa 106 |||||||||||||||||||| Sbjct: 343102 atgacgttcaagcggaggaa 343083 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 atgacgttcaagcggaggaa 106 |||||||||||||||||||| Sbjct: 89950 atgacgttcaagcggaggaa 89931
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 ctgctggcgctggcgctgttcctg 492 |||||||||||| ||||||||||| Sbjct: 3463484 ctgctggcgctgacgctgttcctg 3463507
>gb|BC033691.1| Homo sapiens cytochrome P450, family 2, subfamily S, polypeptide 1, mRNA (cDNA clone MGC:44853 IMAGE:5212609), complete cds Length = 2619 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 ctgctggcgctggcgctgttcctg 492 |||||||||||||||||| ||||| Sbjct: 45 ctgctggcgctggcgctgctcctg 68
>gb|AC158616.8| Mus musculus 10 BAC RP23-227E23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 248127 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 134351 ctccctcctctccccctccc 134370
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 gcgctggcgctgttcctggc 494 |||||||||||||||||||| Sbjct: 2304530 gcgctggcgctgttcctggc 2304511
>ref|XM_748937.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g06020) partial mRNA Length = 2877 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 cgcctgctggcgctggcgct 485 |||||||||||||||||||| Sbjct: 44 cgcctgctggcgctggcgct 63
>gb|AC124421.4| Mus musculus BAC clone RP24-323H7 from chromosome 10, complete sequence Length = 187081 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctccctcctctccccctcc 47 |||||||||||||||||||| Sbjct: 61982 cctccctcctctccccctcc 62001
>gb|AC133099.3| Mus musculus BAC clone RP23-90K8 from chromosome 19, complete sequence Length = 224638 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 220820 ctccctcctctccccctccc 220801
>gb|AC112271.4| Mus musculus BAC clone RP24-121H20 from chromosome 19, complete sequence Length = 170681 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 170405 ctccctcctctccccctccc 170424
>gb|AC122924.2| Mus musculus BAC clone RP23-39M16 from 12, complete sequence Length = 228614 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 169349 ctccctcctctccccctccc 169368
>gb|AC073094.11| Homo sapiens BAC clone RP11-369D24 from 7, complete sequence Length = 189126 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cctccctcctctccccctcccggg 51 ||||||||| |||||||||||||| Sbjct: 56576 cctccctcccctccccctcccggg 56599
>gb|AC073314.4| Homo sapiens BAC clone RP11-143I21 from 7, complete sequence Length = 73888 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 ccccctcccgggcgcctccaccccccgc 67 |||||||| ||||||| ||||||||||| Sbjct: 39020 ccccctccagggcgcccccaccccccgc 39047
>gb|AY358603.1| Homo sapiens clone DNA76395 Cytochrome p450 (UNQ891) mRNA, complete cds Length = 2626 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 ctgctggcgctggcgctgttcctg 492 |||||||||||||||||| ||||| Sbjct: 71 ctgctggcgctggcgctgctcctg 94
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cgcagcgtttcaggcgcagg 398 |||||||||||||||||||| Sbjct: 460050 cgcagcgtttcaggcgcagg 460069
>emb|AL512593.9| Human DNA sequence from clone RP11-508N12 on chromosome 9 Contains two novel genes, the gene for a novel zinc finger protein (FLJ14960, KIAA1803), a ribosomal protein L7a (RPL7A) pseudogene and the 3' end of a novel gene, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 115473 ctccctcctctccccctccc 115492
>emb|AL441992.17| Human DNA sequence from clone RP11-545E17 on chromosome 9 Contains the gene for protein kinase PKNbeta (pknbeta), a novel gene, the ZDHHC12 gene for zinc finger, DHHC domain containing 12 (ZNF400, FLJ14524), the gene for ZYG homolog, a novel gene (FLJ10743), the ENDOG gene for endonuclease G, a novel gene (HSPC109), the 3' end of the CCBL1 gene for cysteine conjugate-beta lyase; cytoplasmic (glutamine transaminase K, kyneurenine aminotransferase) and six CpG islands, complete sequence Length = 166664 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 80073 ctccctcctctccccctccc 80092
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 gctggcgctggcgctgttcctggc 494 |||||||||||||||| ||||||| Sbjct: 3637602 gctggcgctggcgctgatcctggc 3637625
>ref|XM_504158.1| Yarrowia lipolytica CLIB122, YALI0E19701g predicted mRNA Length = 363 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 ccccaaggacaaggctatcaagcg 199 ||||||||||||||| |||||||| Sbjct: 90 ccccaaggacaaggccatcaagcg 113
>emb|AJ969056.1| Triticum aestivum mRNA for glycosyltransferase (pglcat7 gene) Length = 1660 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 tggtggacctggtggtgcgc 468 |||||||||||||||||||| Sbjct: 396 tggtggacctggtggtgcgc 377
>emb|BX035466.1|CNS08ZJ2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA6DC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 402 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 gcgcctgctggcgctggcgc 484 |||||||||||||||||||| Sbjct: 361 gcgcctgctggcgctggcgc 380
>emb|BX031918.1|CNS08WSI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA47CC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 626 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 gcgcctgctggcgctggcgc 484 |||||||||||||||||||| Sbjct: 547 gcgcctgctggcgctggcgc 566
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 gctgctccaactgcgccaag 170 |||||||||||||||||||| Sbjct: 3431204 gctgctccaactgcgccaag 3431223
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 298 tgcaccactgtgtttcttgtgccatcca 325 ||||| ||||||| |||||||||||||| Sbjct: 377278 tgcactactgtgtctcttgtgccatcca 377305
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 gcctgctggcgctggcgctg 486 |||||||||||||||||||| Sbjct: 127621 gcctgctggcgctggcgctg 127602
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tggtgcgcctgctggcgctg 480 |||||||||||||||||||| Sbjct: 102161 tggtgcgcctgctggcgctg 102180
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 gctggcgctggcgctgttcctggc 494 |||||||||||||||| ||||||| Sbjct: 297939 gctggcgctggcgctgctcctggc 297962
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tggtgcgcctgctggcgctg 480 |||||||||||||||||||| Sbjct: 13062 tggtgcgcctgctggcgctg 13081
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 gctggcgctggcgctgttcctggc 494 |||||||||||||||| ||||||| Sbjct: 243427 gctggcgctggcgctgctcctggc 243450
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 gcctgctggcgctggcgctg 486 |||||||||||||||||||| Sbjct: 178761 gcctgctggcgctggcgctg 178780
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tggtgcgcctgctggcgctg 480 |||||||||||||||||||| Sbjct: 297965 tggtgcgcctgctggcgctg 297984
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 459 ggtggtgcgcctgctggcgctggcgctg 486 ||||||| | |||||||||||||||||| Sbjct: 50825 ggtggtgagactgctggcgctggcgctg 50798
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin biosynthetic gene cluster, complete sequence Length = 132544 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 470 tgctggcgctggcgctgttcctggcgcc 497 |||||||||||||||||| |||||||| Sbjct: 106687 tgctggcgctggcgctgtgtctggcgcc 106714
>emb|AL117212.1|SPAC806 S.pombe chromosome I cosmid c806 Length = 22870 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 ccccaaggacaaggctatcaagcg 199 ||||||||||||||| |||||||| Sbjct: 5652 ccccaaggacaaggccatcaagcg 5629
>gb|AC164311.4| Mus musculus BAC clone RP23-144H18 from chromosome 8, complete sequence Length = 190693 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctccctcctctccccctcc 47 |||||||||||||||||||| Sbjct: 36162 cctccctcctctccccctcc 36143
>gb|AC109607.47| Mus musculus strain C57BL/6J clone rp23-146a22 map 8, complete sequence Length = 200759 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctccctcctctccccctcc 47 |||||||||||||||||||| Sbjct: 189588 cctccctcctctccccctcc 189569
>dbj|AK027605.1| Homo sapiens cDNA FLJ14699 fis, clone NT2RP2006571, moderately similar to CYTOCHROME P450 2G1 (EC 1.14.14.1) Length = 2513 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 ctgctggcgctggcgctgttcctg 492 |||||||||||||||||| ||||| Sbjct: 83 ctgctggcgctggcgctgctcctg 106
>gb|AE011662.1| Xanthomonas axonopodis pv. citri str. 306, section 40 of 469 of the complete genome Length = 11001 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gctggcgctggcgctgttcc 490 |||||||||||||||||||| Sbjct: 695 gctggcgctggcgctgttcc 676
>ref|NM_132256.1| Drosophila melanogaster CG15350-RA (Cp7Fb), mRNA Length = 1503 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ccaagctgtatgccaaggtg 299 |||||||||||||||||||| Sbjct: 284 ccaagctgtatgccaaggtg 303
>gb|AC021491.16| Homo sapiens chromosome 17, clone RP11-94C24, complete sequence Length = 175262 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gtgcaggaggcttgtgtgca 262 |||||||||||||||||||| Sbjct: 17047 gtgcaggaggcttgtgtgca 17028
>gb|AC157524.2| Pan troglodytes BAC clone CH251-516K17 from chromosome unknown, complete sequence Length = 204622 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 ccccctcccgggcgcctccacccc 63 |||||||||||||||| ||||||| Sbjct: 82293 ccccctcccgggcgcccccacccc 82270
>ref|NM_001018254.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC806.03c), partial mRNA Length = 363 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 ccccaaggacaaggctatcaagcg 199 ||||||||||||||| |||||||| Sbjct: 90 ccccaaggacaaggccatcaagcg 113
>gb|AC163028.5| Mus musculus chromosome 1, clone RP23-393I22, complete sequence Length = 206399 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 7491 ctccctcctctccccctccc 7510
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 13923081 ctccctcctctccccctccc 13923100 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 13881354 ctccctcctctccccctccc 13881373
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 tcgcctccctcctctccccctccc 48 ||||||||||| |||||||||||| Sbjct: 35823913 tcgcctccctcgtctccccctccc 35823936
>gb|AF335278.1|AF335278 Homo sapiens cytochrome P450 2S1 (CYP2S1) mRNA, complete cds Length = 2261 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 ctgctggcgctggcgctgttcctg 492 |||||||||||||||||| ||||| Sbjct: 28 ctgctggcgctggcgctgctcctg 51
>gb|AC108134.3| Homo sapiens chromosome 16 clone RP11-473M20, complete sequence Length = 180354 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctccctcctctccccctcc 47 |||||||||||||||||||| Sbjct: 460 cctccctcctctccccctcc 441
>gb|AC010443.8| Homo sapiens chromosome 5 clone CTD-2231H16, complete sequence Length = 59396 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctccctcctctccccctcc 47 |||||||||||||||||||| Sbjct: 5791 cctccctcctctccccctcc 5772
>dbj|AB024687.2| Homo sapiens SIX4 gene, complete cds Length = 6977 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctccctcctctccccctcc 47 |||||||||||||||||||| Sbjct: 2160 cctccctcctctccccctcc 2141
>ref|NM_200742.1| Danio rerio ribosomal protein S26, like (rps26l), mRNA Length = 438 Score = 40.1 bits (20), Expect = 7.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 146 catccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaag 197 |||||||||| ||||||||||| ||| |||||| |||||||| |||||| Sbjct: 66 catccgctgcaccaactgcgcccgctgcgtccccaaagacaaggccatcaag 117
>gb|AC009958.3| Homo sapiens BAC clone RP11-316G9 from 2, complete sequence Length = 211201 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 tgtggagcaggctgctgtga 237 |||||||||||||||||||| Sbjct: 163378 tgtggagcaggctgctgtga 163397
>gb|AC110080.2| Homo sapiens BAC clone RP11-421K23 from 2, complete sequence Length = 172465 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 tgtggagcaggctgctgtga 237 |||||||||||||||||||| Sbjct: 90707 tgtggagcaggctgctgtga 90726
>gb|AC011510.7|AC011510 Homo sapiens chromosome 19 clone CTD-2195B23, complete sequence Length = 129402 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 ctgctggcgctggcgctgttcctg 492 |||||||||||||||||| ||||| Sbjct: 21843 ctgctggcgctggcgctgctcctg 21866
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ctcgcctccctcctctcccc 43 |||||||||||||||||||| Sbjct: 63802 ctcgcctccctcctctcccc 63783
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 cctggtggacctggtggtgc 466 |||||||||||||||||||| Sbjct: 2579333 cctggtggacctggtggtgc 2579352
>gb|AE004513.1| Pseudomonas aeruginosa PAO1, section 74 of 529 of the complete genome Length = 15470 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 gcgcctgctggcgctggcgc 484 |||||||||||||||||||| Sbjct: 10349 gcgcctgctggcgctggcgc 10368
>gb|AC009283.6| Homo sapiens chromosome 17, clone RP11-390P24, complete sequence Length = 175320 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 23 cctcgcctccctcctctccccctcccgggcgc 54 |||| |||||| || ||||||||||||||||| Sbjct: 7672 cctcccctcccgcccctccccctcccgggcgc 7641
>gb|AC021087.5| Homo sapiens chromosome 5 clone CTD-2083E4, complete sequence Length = 156677 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctccctcctctccccctcc 47 |||||||||||||||||||| Sbjct: 1633 cctccctcctctccccctcc 1652
>ref|XM_216893.3| PREDICTED: Rattus norvegicus cleavage and polyadenylation specific factor 6, 68kDa (predicted) (Cpsf6_predicted), mRNA Length = 2481 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 ggaggccctggtggacctggtggt 464 ||||||||| |||||||||||||| Sbjct: 1364 ggaggccctagtggacctggtggt 1341
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 tggcgctggcgctgttcctggcgc 496 |||||||||||||||||| ||||| Sbjct: 4187568 tggcgctggcgctgttcccggcgc 4187591 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 467 gcctgctggcgctggcgctgttcc 490 ||||||||| |||||||||||||| Sbjct: 1926358 gcctgctggtgctggcgctgttcc 1926381
>gb|AC023696.4| Drosophila melanogaster X BAC RP98-17J10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174367 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ccaagctgtatgccaaggtg 299 |||||||||||||||||||| Sbjct: 64426 ccaagctgtatgccaaggtg 64445
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 gcctgctggcgctggcgctg 486 |||||||||||||||||||| Sbjct: 858796 gcctgctggcgctggcgctg 858815
>dbj|AP005911.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040C06 Length = 158875 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 42202 ctccctcctctccccctccc 42221 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 475 ctccctcctctccccctccc 494
>dbj|AP005690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0052I14 Length = 168285 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 166518 ctccctcctctccccctccc 166537
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_E10 Length = 107284 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 tcgcctccctcctctccccctccc 48 ||||||||||| |||||||||||| Sbjct: 14459 tcgcctccctcgtctccccctccc 14482
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1149_C12 Length = 120743 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 tcgcctccctcctctccccctccc 48 ||||||||||| |||||||||||| Sbjct: 94628 tcgcctccctcgtctccccctccc 94651
>dbj|BS000156.1| Pan troglodytes chromosome 22 clone:RP43-145H09, map 22, complete sequences Length = 152714 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ccccctcccgggcgcctccacccc 63 |||||||||||||||| ||||||| Sbjct: 78903 ccccctcccgggcgcccccacccc 78926
>dbj|AK108295.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-E05, full insert sequence Length = 546 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 ccccaaggacaaggctatcaagcg 199 ||||||||||||||| |||||||| Sbjct: 106 ccccaaggacaaggcgatcaagcg 129
>dbj|AK100140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010P10, full insert sequence Length = 1368 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 tcgcctccctcctctccccctccc 48 ||||||||||| |||||||||||| Sbjct: 472 tcgcctccctcgtctccccctccc 495
>dbj|AK072277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010P11, full insert sequence Length = 1368 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 tcgcctccctcctctccccctccc 48 ||||||||||| |||||||||||| Sbjct: 472 tcgcctccctcgtctccccctccc 495
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 cgtgctggaggccctggtgg 454 |||||||||||||||||||| Sbjct: 158332 cgtgctggaggccctggtgg 158313
>dbj|AK068465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156C14, full insert sequence Length = 1739 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ctcgcctccctcctctcccc 43 |||||||||||||||||||| Sbjct: 5 ctcgcctccctcctctcccc 24
>gb|AF169387.1|AF169387 Mus musculus alpha 3 collagen IV (Col4a3) mRNA, complete cds Length = 7765 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 ctggaggccctggtggacctggtg 462 ||||||| |||||||||||||||| Sbjct: 1666 ctggagggcctggtggacctggtg 1643
>emb|AL845306.9| Zebrafish DNA sequence from clone DKEY-217M5 in linkage group 20, complete sequence Length = 186675 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 tgctgtgagagatgtgcagg 249 |||||||||||||||||||| Sbjct: 57900 tgctgtgagagatgtgcagg 57919
>dbj|AK058645.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-E08, full insert sequence Length = 1525 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 tcgcctccctcctctccccctccc 48 ||||||||||| |||||||||||| Sbjct: 405 tcgcctccctcgtctccccctccc 428
>gb|AY110541.1| Zea mays CL4825_1 mRNA sequence Length = 837 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 gcctgctggcgctggcgctg 486 |||||||||||||||||||| Sbjct: 106 gcctgctggcgctggcgctg 125
>emb|AL954225.2|PTB448G23 Pan troglodytes chromosome 22 BAC PTB-448G23, complete sequence Length = 173384 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ccccctcccgggcgcctccacccc 63 |||||||||||||||| ||||||| Sbjct: 45643 ccccctcccgggcgcccccacccc 45666
>emb|X63389.1|CCRNS26MR C.cricetus mRNA for ribosomal protein S26 Length = 437 Score = 40.1 bits (20), Expect = 7.5 Identities = 59/72 (81%) Strand = Plus / Plus Query: 126 ggccgcggccatgtcaagtacatccgctgctccaactgcgccaagtgctgccccaaggac 185 |||||||||||||| || ||||||||| | ||||||||| |||| ||||||||| Sbjct: 63 ggccgcggccatgtgcagccgatccgctgcacgaactgcgcccggtgcgtgcccaaggac 122 Query: 186 aaggctatcaag 197 ||||| |||||| Sbjct: 123 aaggccatcaag 134
>emb|AL132777.4|CNS01DTI Human chromosome 14 DNA sequence BAC R-307P22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 191464 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctccctcctctccccctcc 47 |||||||||||||||||||| Sbjct: 137145 cctccctcctctccccctcc 137126
>gb|AE003444.3| Drosophila melanogaster chromosome X, section 28 of 74 of the complete sequence Length = 299633 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ccaagctgtatgccaaggtg 299 |||||||||||||||||||| Sbjct: 58880 ccaagctgtatgccaaggtg 58899
>gb|AC159020.2| Pan troglodytes BAC clone CH251-530A5 from chromosome unknown, complete sequence Length = 219428 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 216216 ctccctcctctccccctccc 216197
>gb|AC005288.1|AC005288 Homo sapiens chromosome 17, clone hCIT.131_K_11, complete sequence Length = 137496 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 23 cctcgcctccctcctctccccctcccgggcgc 54 |||| |||||| || ||||||||||||||||| Sbjct: 6867 cctcccctcccgcccctccccctcccgggcgc 6898
>gb|AC146295.3| Mus musculus BAC clone RP24-134N2 from 8, complete sequence Length = 181261 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 141512 ctccctcctctccccctccc 141531
>gb|AC004590.1|AC004590 Homo sapiens chromosome 17, clone hCIT.22_K_21, complete sequence Length = 135259 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 gtgcaggaggcttgtgtgca 262 |||||||||||||||||||| Sbjct: 59143 gtgcaggaggcttgtgtgca 59162
>gb|AC004233.1|AC004233 Homo sapiens chromosome 16, cosmid clone 380H5 (LANL), complete sequence Length = 36736 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctccctcctctccccctcc 47 |||||||||||||||||||| Sbjct: 16582 cctccctcctctccccctcc 16563
>ref|NG_000834.1| Homo sapiens immunoglobulin kappa locus, proximal V-cluster and J-C cluster (IGK-proximal) on chromosome 2 Length = 515442 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tgtggagcaggctgctgtga 237 |||||||||||||||||||| Sbjct: 92530 tgtggagcaggctgctgtga 92511
>ref|NG_000833.1| Homo sapiens immunoglobulin kappa locus, distal duplicated V-cluster (IGK-distal) on chromosome 2 Length = 407661 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 tgtggagcaggctgctgtga 237 |||||||||||||||||||| Sbjct: 315576 tgtggagcaggctgctgtga 315595
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 440 tggaggccctggtggacctggtgg 463 |||||||||||||||| ||||||| Sbjct: 1638349 tggaggccctggtggagctggtgg 1638372
>emb|AL929246.7| Mouse DNA sequence from clone RP23-34J8 on chromosome 2, complete sequence Length = 142905 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 82032 ctccctcctctccccctccc 82051
>emb|AL731693.9| Mouse DNA sequence from clone RP23-233O1 on chromosome X, complete sequence Length = 177997 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 71353 ctccctcctctccccctccc 71334
>gb|AC130656.11| Mus musculus chromosome 15, clone RP23-305M4, complete sequence Length = 185933 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 150466 ctccctcctctccccctccc 150485
>gb|AC123611.7| Mus musculus chromosome 15, clone RP23-345H23, complete sequence Length = 209792 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ctccctcctctccccctccc 48 |||||||||||||||||||| Sbjct: 193867 ctccctcctctccccctccc 193848
>dbj|AP001235.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:cos607/7B8 Length = 8421 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tgtggagcaggctgctgtga 237 |||||||||||||||||||| Sbjct: 4453 tgtggagcaggctgctgtga 4434
>dbj|AP001226.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:cos237 Length = 33101 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 tgtggagcaggctgctgtga 237 |||||||||||||||||||| Sbjct: 25328 tgtggagcaggctgctgtga 25347
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482D04 Length = 144583 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ctcgcctccctcctctcccc 43 |||||||||||||||||||| Sbjct: 101839 ctcgcctccctcctctcccc 101820 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,234,910 Number of Sequences: 3902068 Number of extensions: 4234910 Number of successful extensions: 116275 Number of sequences better than 10.0: 229 Number of HSP's better than 10.0 without gapping: 214 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 112883 Number of HSP's gapped (non-prelim): 3364 length of query: 553 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 530 effective length of database: 17,143,297,704 effective search space: 9085947783120 effective search space used: 9085947783120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
