ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags22l14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105524.1| Zea mays PCO080486 mRNA sequence 555 e-155
2dbj|AK060244.1| Oryza sativa (japonica cultivar-group) cDNA clon... 547 e-152
3ref|NM_127662.2| Arabidopsis thaliana unknown protein AT2G20930 ... 186 6e-44
4gb|BT025606.1| Arabidopsis thaliana At2g20930 mRNA, complete cds 186 6e-44
5emb|BX821308.1|CNS0AA2T Arabidopsis thaliana Full-length cDNA Co... 186 6e-44
6emb|BX842087.1|CNS09YAW Arabidopsis thaliana Full-length cDNA Co... 186 6e-44
7gb|AY086771.1| Arabidopsis thaliana clone 27566 mRNA, complete s... 178 1e-41
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
9dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
10dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
11gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence 133 8e-28
12gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map... 72 2e-09
13dbj|AK174119.1| Ciona intestinalis cDNA, clone:ciad092d15, full ... 54 6e-04
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
15gb|AF146567.1|AF146567 Mycobacterium tuberculosis RNA polymerase... 42 2.2
16dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
17dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
18dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
19emb|CT025626.11| Mouse DNA sequence from clone RP24-141G14 on ch... 42 2.2
20gb|AC125267.18| Mus musculus chromosome 10, clone RP24-483E18, c... 40 8.7
21gb|AC168273.3| Mus musculus BAC RP23-184H4 (Roswell Park Cancer... 40 8.7
22gb|AC007862.7| Trypanosoma brucei chromosome 2 clone RPCI93-10C8... 40 8.7
23gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 40 8.7
24gb|AC154528.2| Mus musculus BAC clone RP23-460I18 from chromosom... 40 8.7
25ref|XM_872624.1| PREDICTED: Bos taurus similar to steroid-sensit... 40 8.7
26ref|XM_593217.2| PREDICTED: Bos taurus similar to steroid-sensit... 40 8.7
27ref|XM_946487.1| Trypanosoma brucei TREU927 hypothetical protein... 40 8.7
28gb|AC121881.3| Mus musculus BAC clone RP24-134L8 from chromosome... 40 8.7
29gb|AF100656.1| Caenorhabditis elegans cosmid F49F1, complete seq... 40 8.7
30emb|AL390834.24| Human DNA sequence from clone RP11-468L18 on ch... 40 8.7
31emb|AL354696.11| Human DNA sequence from clone RP11-74J13 on chr... 40 8.7
32gb|AF520420.1| Mus musculus c222389 pseudogene, complete sequenc... 40 8.7
33gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 8.7
34ref|NM_068091.1| Caenorhabditis elegans F49F1.11 (F49F1.11) mRNA... 40 8.7
35ref|NM_060483.1| Caenorhabditis elegans F46A8.4 (F46A8.4) mRNA, ... 40 8.7
36ref|NM_060484.2| Caenorhabditis elegans F46A8.3 (F46A8.3) mRNA, ... 40 8.7
37gb|AC155912.7| Mus musculus 10 BAC RP24-536C12 (Roswell Park Can... 40 8.7
38gb|AF293442.1|AF293442 Streptomyces sp. R1128 biosynthetic gene ... 40 8.7
39dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
40gb|AE005119.1| Halobacterium sp. NRC-1 section 150 of 170 of the... 40 8.7
41emb|Z81539.1|CEF46A8 Caenorhabditis elegans Cosmid F46A8, comple... 40 8.7
42gb|AC174647.2| Mus musculus BAC clone RP23-25C24 from chromosome... 40 8.7
43gb|DQ120623.1| Hylobates lar eFI-2-gamma gene, partial cds 40 8.7
44emb|AL671890.11| Mouse DNA sequence from clone RP23-408A13 on ch... 40 8.7 
>gb|AY105524.1| Zea mays PCO080486 mRNA sequence
          Length = 720

 Score =  555 bits (280), Expect = e-155
 Identities = 391/428 (91%)
 Strand = Plus / Plus

                                                                       
Query: 99  ggaaacatgatcgtctgcgtcgccgtcgtcggccaccagaacaacccgctgtacctccag 158
           |||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 129 ggaatcatgatcgtctgcgtcgccgttgtcggccaccagaacaatccgctgtacctgcag 188

                                                                       
Query: 159 agcttcacggaggcggacgacgccctcaagctccaccacgtcgtccactgctccctcgac 218
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 189 agcttcacggaggcggacgacgccctcaagctccaccacatcgtccactgctctctcgac 248

                                                                       
Query: 219 gtcatcgacgagcgagtgaacaatcctaaaaggagcgcacctacactgaacgagacattt 278
           ||||||||||||||||||| ||||||||| ||||| ||||||||| |||| |||||||||
Sbjct: 249 gtcatcgacgagcgagtgagcaatcctaagaggagtgcacctacattgaatgagacattt 308

                                                                       
Query: 279 ttgggtcttctatatcctaccgagaactacaaagtgtatggctatttgacaaacacaaag 338
           |||||||||||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttgggtcttctatacccaactgagaactacaaagtgtatggctatttgacaaacacaaag 368

                                                                       
Query: 339 gtcaaatttttaatggttacaactgatcttgatgtgaaagatgcggatgcccgaaatttt 398
           ||||||||| | ||||| || |||||||||||||| |||||||| |||||| ||||||||
Sbjct: 369 gtcaaatttatcatggtcacgactgatcttgatgtcaaagatgcagatgccagaaatttt 428

                                                                       
Query: 399 ttcaggaagttccatgctgcatacgtggatgccgtctcgaaccctttccacgtccctggg 458
           ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| |||
Sbjct: 429 ttcaggaagttccatgctgcatatgtagatgccgtctcgaacccgttccatgtcccaggg 488

                                                                       
Query: 459 aagaagatcgcgtcgagaagcttcggcgcgagagtgagcaccatagtgaaatcctttggc 518
           |||||||| || || |||||||| || || ||||| |||||||| || |||||||| || 
Sbjct: 489 aagaagattgcttcaagaagctttggtgcaagagtaagcaccatcgttaaatccttcggt 548

                   
Query: 519 tcagggac 526
           ||||||||
Sbjct: 549 tcagggac 556
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>dbj|AK060244.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G05, full
           insert sequence
          Length = 724

 Score =  547 bits (276), Expect = e-152
 Identities = 390/428 (91%)
 Strand = Plus / Plus

                                                                       
Query: 99  ggaaacatgatcgtctgcgtcgccgtcgtcggccaccagaacaacccgctgtacctccag 158
           ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 127 ggaaacatgatcgtctgcgtcgccgtcgtcggccatcagaacaaccctctgtacctgcag 186

                                                                       
Query: 159 agcttcacggaggcggacgacgccctcaagctccaccacgtcgtccactgctccctcgac 218
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 187 agcttcacggaggcggacgacgccctcaagctccaccacgtcgtgcactgctccctcgac 246

                                                                       
Query: 219 gtcatcgacgagcgagtgaacaatcctaaaaggagcgcacctacactgaacgagacattt 278
           ||||||||||||||||||||||||||||||||||  || ||| |||| ||||||||||||
Sbjct: 247 gtcatcgacgagcgagtgaacaatcctaaaaggaatgcgcctgcacttaacgagacattt 306

                                                                       
Query: 279 ttgggtcttctatatcctaccgagaactacaaagtgtatggctatttgacaaacacaaag 338
           ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 307 ttgggtcttctatatccgaccgagaattacaaagtgtatggctatttgactaacacgaag 366

                                                                       
Query: 339 gtcaaatttttaatggttacaactgatcttgatgtgaaagatgcggatgcccgaaatttt 398
           ||||||||| | ||||| ||||||||||||||||| |||||||| |||||| ||||||||
Sbjct: 367 gtcaaatttatcatggtcacaactgatcttgatgtcaaagatgcagatgccagaaatttt 426

                                                                       
Query: 399 ttcaggaagttccatgctgcatacgtggatgccgtctcgaaccctttccacgtccctggg 458
           ||||||||||||||||||||||| || || || || |||||||| || ||||| || |||
Sbjct: 427 ttcaggaagttccatgctgcatatgtagacgctgtttcgaacccctttcacgttccaggg 486

                                                                       
Query: 459 aagaagatcgcgtcgagaagcttcggcgcgagagtgagcaccatagtgaaatcctttggc 518
           |||||||| ||||| |||||||| || || ||||| ||||| || ||||||||||| || 
Sbjct: 487 aagaagattgcgtcaagaagctttggtgcaagagtaagcacaattgtgaaatccttcggt 546

                   
Query: 519 tcagggac 526
           ||||||||
Sbjct: 547 tcagggac 554
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>ref|NM_127662.2| Arabidopsis thaliana unknown protein AT2G20930 mRNA, complete cds
          Length = 675

 Score =  186 bits (94), Expect = 6e-44
 Identities = 295/362 (81%)
 Strand = Plus / Plus

                                                                       
Query: 105 atgatcgtctgcgtcgccgtcgtcggccaccagaacaacccgctgtacctccagagcttc 164
           |||||||| ||||||||||||||||||||||||||||| ||||| ||| | || ||||||
Sbjct: 82  atgatcgtttgcgtcgccgtcgtcggccaccagaacaatccgctttacatacaaagcttc 141

                                                                       
Query: 165 acggaggcggacgacgccctcaagctccaccacgtcgtccactgctccctcgacgtcatc 224
           ||||| || ||||| || ||||||||||||||| | || || |||||||| || ||||||
Sbjct: 142 acggatgctgacgatgctctcaagctccaccacattgttcattgctcccttgatgtcatc 201

                                                                       
Query: 225 gacgagcgagtgaacaatcctaaaaggagcgcacctacactgaacgagacatttttgggt 284
           || ||||||||||||||||| |||| |   |   | |||||||||||| | ||| | || 
Sbjct: 202 gaagagcgagtgaacaatccgaaaaagtctggtacaacactgaacgaggcttttcttggc 261

                                                                       
Query: 285 cttctatatcctaccgagaactacaaagtgtatggctatttgacaaacacaaaggtcaaa 344
            | || |||||||| | |||||||||||||||||| || ||||| || || ||||| |||
Sbjct: 262 ttgctctatcctactgtgaactacaaagtgtatggttacttgactaataccaaggttaaa 321

                                                                       
Query: 345 tttttaatggttacaactgatcttgatgtgaaagatgcggatgcccgaaattttttcagg 404
           ||| || |||| || |||||| | ||||| | |||  | ||||   ||| ||| ||||||
Sbjct: 322 tttatattggtcactactgatttggatgttagagacaccgatgtgagaagtttcttcagg 381

                                                                       
Query: 405 aagttccatgctgcatacgtggatgccgtctcgaaccctttccacgtccctgggaagaag 464
           |||||||||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||
Sbjct: 382 aagttccatgctgcttacgttgatgcagtctcaaacccctttcatgtccctggcaaaaag 441

             
Query: 465 at 466
           ||
Sbjct: 442 at 443
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>gb|BT025606.1| Arabidopsis thaliana At2g20930 mRNA, complete cds
          Length = 423

 Score =  186 bits (94), Expect = 6e-44
 Identities = 295/362 (81%)
 Strand = Plus / Plus

                                                                       
Query: 105 atgatcgtctgcgtcgccgtcgtcggccaccagaacaacccgctgtacctccagagcttc 164
           |||||||| ||||||||||||||||||||||||||||| ||||| ||| | || ||||||
Sbjct: 1   atgatcgtttgcgtcgccgtcgtcggccaccagaacaatccgctttacatacaaagcttc 60

                                                                       
Query: 165 acggaggcggacgacgccctcaagctccaccacgtcgtccactgctccctcgacgtcatc 224
           ||||| || ||||| || ||||||||||||||| | || || |||||||| || ||||||
Sbjct: 61  acggatgctgacgatgctctcaagctccaccacattgttcattgctcccttgatgtcatc 120

                                                                       
Query: 225 gacgagcgagtgaacaatcctaaaaggagcgcacctacactgaacgagacatttttgggt 284
           || ||||||||||||||||| |||| |   |   | |||||||||||| | ||| | || 
Sbjct: 121 gaagagcgagtgaacaatccgaaaaagtctggtacaacactgaacgaggcttttcttggc 180

                                                                       
Query: 285 cttctatatcctaccgagaactacaaagtgtatggctatttgacaaacacaaaggtcaaa 344
            | || |||||||| | |||||||||||||||||| || ||||| || || ||||| |||
Sbjct: 181 ttgctctatcctactgtgaactacaaagtgtatggttacttgactaataccaaggttaaa 240

                                                                       
Query: 345 tttttaatggttacaactgatcttgatgtgaaagatgcggatgcccgaaattttttcagg 404
           ||| || |||| || |||||| | ||||| | |||  | ||||   ||| ||| ||||||
Sbjct: 241 tttatattggtcactactgatttggatgttagagacaccgatgtgagaagtttcttcagg 300

                                                                       
Query: 405 aagttccatgctgcatacgtggatgccgtctcgaaccctttccacgtccctgggaagaag 464
           |||||||||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||
Sbjct: 301 aagttccatgctgcttacgttgatgcagtctcaaacccctttcatgtccctggcaaaaag 360

             
Query: 465 at 466
           ||
Sbjct: 361 at 362
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>emb|BX821308.1|CNS0AA2T Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL33ZA04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 576

 Score =  186 bits (94), Expect = 6e-44
 Identities = 295/362 (81%)
 Strand = Plus / Plus

                                                                       
Query: 105 atgatcgtctgcgtcgccgtcgtcggccaccagaacaacccgctgtacctccagagcttc 164
           |||||||| ||||||||||||||||||||||||||||| ||||| ||| | || ||||||
Sbjct: 43  atgatcgtttgcgtcgccgtcgtcggccaccagaacaatccgctttacatacaaagcttc 102

                                                                       
Query: 165 acggaggcggacgacgccctcaagctccaccacgtcgtccactgctccctcgacgtcatc 224
           ||||| || ||||| || ||||||||||||||| | || || |||||||| || ||||||
Sbjct: 103 acggatgctgacgatgctctcaagctccaccacattgttcattgctcccttgatgtcatc 162

                                                                       
Query: 225 gacgagcgagtgaacaatcctaaaaggagcgcacctacactgaacgagacatttttgggt 284
           || ||||||||||||||||| |||| |   |   | |||||||||||| | ||| | || 
Sbjct: 163 gaagagcgagtgaacaatccgaaaaagtctggtacaacactgaacgaggcttttcttggc 222

                                                                       
Query: 285 cttctatatcctaccgagaactacaaagtgtatggctatttgacaaacacaaaggtcaaa 344
            | || |||||||| | |||||||||||||||||| || ||||| || || ||||| |||
Sbjct: 223 ttgctctatcctactgtgaactacaaagtgtatggttacttgactaataccaaggttaaa 282

                                                                       
Query: 345 tttttaatggttacaactgatcttgatgtgaaagatgcggatgcccgaaattttttcagg 404
           ||| || |||| || |||||| | ||||| | |||  | ||||   ||| ||| ||||||
Sbjct: 283 tttatattggtcactactgatttggatgttagagacaccgatgtgagaagtttcttcagg 342

                                                                       
Query: 405 aagttccatgctgcatacgtggatgccgtctcgaaccctttccacgtccctgggaagaag 464
           |||||||||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||
Sbjct: 343 aagttccatgctgcttacgttgatgcagtctcaaacccctttcatgtccctggcaaaaag 402

             
Query: 465 at 466
           ||
Sbjct: 403 at 404
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>emb|BX842087.1|CNS09YAW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL67ZF06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 594

 Score =  186 bits (94), Expect = 6e-44
 Identities = 295/362 (81%)
 Strand = Plus / Plus

                                                                       
Query: 105 atgatcgtctgcgtcgccgtcgtcggccaccagaacaacccgctgtacctccagagcttc 164
           |||||||| ||||||||||||||||||||||||||||| ||||| ||| | || ||||||
Sbjct: 22  atgatcgtttgcgtcgccgtcgtcggccaccagaacaatccgctttacatacaaagcttc 81

                                                                       
Query: 165 acggaggcggacgacgccctcaagctccaccacgtcgtccactgctccctcgacgtcatc 224
           ||||| || ||||| || ||||||||||||||| | || || |||||||| || ||||||
Sbjct: 82  acggatgctgacgatgctctcaagctccaccacattgttcattgctcccttgatgtcatc 141

                                                                       
Query: 225 gacgagcgagtgaacaatcctaaaaggagcgcacctacactgaacgagacatttttgggt 284
           || ||||||||||||||||| |||| |   |   | |||||||||||| | ||| | || 
Sbjct: 142 gaagagcgagtgaacaatccgaaaaagtctggtacaacactgaacgaggcttttcttggc 201

                                                                       
Query: 285 cttctatatcctaccgagaactacaaagtgtatggctatttgacaaacacaaaggtcaaa 344
            | || |||||||| | |||||||||||||||||| || ||||| || || ||||| |||
Sbjct: 202 ttgctctatcctactgtgaactacaaagtgtatggttacttgactaataccaaggttaaa 261

                                                                       
Query: 345 tttttaatggttacaactgatcttgatgtgaaagatgcggatgcccgaaattttttcagg 404
           ||| || |||| || |||||| | ||||| | |||  | ||||   ||| ||| ||||||
Sbjct: 262 tttatattggtcactactgatttggatgttagagacaccgatgtgagaagtttcttcagg 321

                                                                       
Query: 405 aagttccatgctgcatacgtggatgccgtctcgaaccctttccacgtccctgggaagaag 464
           |||||||||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||
Sbjct: 322 aagttccatgctgcttacgttgatgcagtctcaaacccctttcatgtccctggcaaaaag 381

             
Query: 465 at 466
           ||
Sbjct: 382 at 383
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>gb|AY086771.1| Arabidopsis thaliana clone 27566 mRNA, complete sequence
          Length = 665

 Score =  178 bits (90), Expect = 1e-41
 Identities = 294/362 (81%)
 Strand = Plus / Plus

                                                                       
Query: 105 atgatcgtctgcgtcgccgtcgtcggccaccagaacaacccgctgtacctccagagcttc 164
           |||||||| ||||||||||||||||||||||||||||| ||||| ||| | || ||||||
Sbjct: 71  atgatcgtttgcgtcgccgtcgtcggccaccagaacaatccgctttacatacaaagcttc 130

                                                                       
Query: 165 acggaggcggacgacgccctcaagctccaccacgtcgtccactgctccctcgacgtcatc 224
           ||||| |  ||||| || ||||||||||||||| | || || |||||||| || ||||||
Sbjct: 131 acggatgttgacgatgctctcaagctccaccacattgttcattgctcccttgatgtcatc 190

                                                                       
Query: 225 gacgagcgagtgaacaatcctaaaaggagcgcacctacactgaacgagacatttttgggt 284
           || ||||||||||||||||| |||| |   |   | |||||||||||| | ||| | || 
Sbjct: 191 gaagagcgagtgaacaatccgaaaaagtctggtacaacactgaacgaggcttttcttggc 250

                                                                       
Query: 285 cttctatatcctaccgagaactacaaagtgtatggctatttgacaaacacaaaggtcaaa 344
            | || |||||||| | |||||||||||||||||| || ||||| || || ||||| |||
Sbjct: 251 ttgctctatcctactgtgaactacaaagtgtatggttacttgactaataccaaggttaaa 310

                                                                       
Query: 345 tttttaatggttacaactgatcttgatgtgaaagatgcggatgcccgaaattttttcagg 404
           ||| || |||| || |||||| | ||||| | |||  | ||||   ||| ||| ||||||
Sbjct: 311 tttatattggtcactactgatttggatgttagagacaccgatgtgagaagtttcttcagg 370

                                                                       
Query: 405 aagttccatgctgcatacgtggatgccgtctcgaaccctttccacgtccctgggaagaag 464
           |||||||||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||
Sbjct: 371 aagttccatgctgcttacgttgatgcagtctcaaacccctttcatgtccctggcaaaaag 430

             
Query: 465 at 466
           ||
Sbjct: 431 at 432
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  174 bits (88), Expect = 2e-40
 Identities = 97/100 (97%)
 Strand = Plus / Minus

                                                                            
Query: 135      cagaacaacccgctgtacctccagagcttcacggaggcggacgacgccctcaagctccac 194
                ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 21031045 cagaacaaccctctgtacctgcagagcttcacggaggcggacgacgccctcaagctccac 21030986

                                                        
Query: 195      cacgtcgtccactgctccctcgacgtcatcgacgagcgag 234
                |||||||| |||||||||||||||||||||||||||||||
Sbjct: 21030985 cacgtcgtgcactgctccctcgacgtcatcgacgagcgag 21030946



 Score =  111 bits (56), Expect = 3e-21
 Identities = 77/84 (91%)
 Strand = Plus / Minus

                                                                            
Query: 233      agtgaacaatcctaaaaggagcgcacctacactgaacgagacatttttgggtcttctata 292
                ||||||||||||||||||||  || ||| |||| ||||||||||||||||||||||||||
Sbjct: 21030474 agtgaacaatcctaaaaggaatgcgcctgcacttaacgagacatttttgggtcttctata 21030415

                                        
Query: 293      tcctaccgagaactacaaagtgta 316
                ||| |||||||| |||||||||||
Sbjct: 21030414 tccgaccgagaattacaaagtgta 21030391



 Score =  109 bits (55), Expect = 1e-20
 Identities = 112/131 (85%)
 Strand = Plus / Minus

                                                                            
Query: 396      tttttcaggaagttccatgctgcatacgtggatgccgtctcgaaccctttccacgtccct 455
                |||||||||||||||||||||||||| || || || || |||||||| || ||||| || 
Sbjct: 21029654 tttttcaggaagttccatgctgcatatgtagacgctgtttcgaacccctttcacgttcca 21029595

                                                                            
Query: 456      gggaagaagatcgcgtcgagaagcttcggcgcgagagtgagcaccatagtgaaatccttt 515
                ||||||||||| ||||| |||||||| || || ||||| ||||| || ||||||||||| 
Sbjct: 21029594 gggaagaagattgcgtcaagaagctttggtgcaagagtaagcacaattgtgaaatccttc 21029535

                           
Query: 516      ggctcagggac 526
                || ||||||||
Sbjct: 21029534 ggttcagggac 21029524



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                            
Query: 314      gtatggctatttgacaaacacaaaggtcaaatttttaatggttacaactgatcttgatgt 373
                ||||||||||||||| ||||| |||||||||||| | ||||| |||||||||||||||||
Sbjct: 21030070 gtatggctatttgactaacacgaaggtcaaatttatcatggtcacaactgatcttgatgt 21030011

                                      
Query: 374      gaaagatgcggatgcccgaaat 395
                 |||||||| |||||| |||||
Sbjct: 21030010 caaagatgcagatgccagaaat 21029989



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                                   
Query: 99       ggaaacatgatcgtctgcgtcgccgtcgtcggcca 133
                |||||||||||||||||||||||||||||||||||
Sbjct: 21031209 ggaaacatgatcgtctgcgtcgccgtcgtcggcca 21031175



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 115      gcgtcgccgtcgtcggccaccagaa 139
                ||||||||||||||||| |||||||
Sbjct: 21398867 gcgtcgccgtcgtcggctaccagaa 21398843
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>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1274F11
          Length = 171257

 Score =  174 bits (88), Expect = 2e-40
 Identities = 97/100 (97%)
 Strand = Plus / Minus

                                                                          
Query: 135    cagaacaacccgctgtacctccagagcttcacggaggcggacgacgccctcaagctccac 194
              ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 123134 cagaacaaccctctgtacctgcagagcttcacggaggcggacgacgccctcaagctccac 123075

                                                      
Query: 195    cacgtcgtccactgctccctcgacgtcatcgacgagcgag 234
              |||||||| |||||||||||||||||||||||||||||||
Sbjct: 123074 cacgtcgtgcactgctccctcgacgtcatcgacgagcgag 123035



 Score =  111 bits (56), Expect = 3e-21
 Identities = 77/84 (91%)
 Strand = Plus / Minus

                                                                          
Query: 233    agtgaacaatcctaaaaggagcgcacctacactgaacgagacatttttgggtcttctata 292
              ||||||||||||||||||||  || ||| |||| ||||||||||||||||||||||||||
Sbjct: 122563 agtgaacaatcctaaaaggaatgcgcctgcacttaacgagacatttttgggtcttctata 122504

                                      
Query: 293    tcctaccgagaactacaaagtgta 316
              ||| |||||||| |||||||||||
Sbjct: 122503 tccgaccgagaattacaaagtgta 122480



 Score =  109 bits (55), Expect = 1e-20
 Identities = 112/131 (85%)
 Strand = Plus / Minus

                                                                          
Query: 396    tttttcaggaagttccatgctgcatacgtggatgccgtctcgaaccctttccacgtccct 455
              |||||||||||||||||||||||||| || || || || |||||||| || ||||| || 
Sbjct: 121743 tttttcaggaagttccatgctgcatatgtagacgctgtttcgaacccctttcacgttcca 121684

                                                                          
Query: 456    gggaagaagatcgcgtcgagaagcttcggcgcgagagtgagcaccatagtgaaatccttt 515
              ||||||||||| ||||| |||||||| || || ||||| ||||| || ||||||||||| 
Sbjct: 121683 gggaagaagattgcgtcaagaagctttggtgcaagagtaagcacaattgtgaaatccttc 121624

                         
Query: 516    ggctcagggac 526
              || ||||||||
Sbjct: 121623 ggttcagggac 121613



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                          
Query: 314    gtatggctatttgacaaacacaaaggtcaaatttttaatggttacaactgatcttgatgt 373
              ||||||||||||||| ||||| |||||||||||| | ||||| |||||||||||||||||
Sbjct: 122159 gtatggctatttgactaacacgaaggtcaaatttatcatggtcacaactgatcttgatgt 122100

                                    
Query: 374    gaaagatgcggatgcccgaaat 395
               |||||||| |||||| |||||
Sbjct: 122099 caaagatgcagatgccagaaat 122078



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                                 
Query: 99     ggaaacatgatcgtctgcgtcgccgtcgtcggcca 133
              |||||||||||||||||||||||||||||||||||
Sbjct: 123298 ggaaacatgatcgtctgcgtcgccgtcgtcggcca 123264
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>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone: P0478E02
          Length = 140715

 Score =  174 bits (88), Expect = 2e-40
 Identities = 97/100 (97%)
 Strand = Plus / Minus

                                                                         
Query: 135   cagaacaacccgctgtacctccagagcttcacggaggcggacgacgccctcaagctccac 194
             ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 52345 cagaacaaccctctgtacctgcagagcttcacggaggcggacgacgccctcaagctccac 52286

                                                     
Query: 195   cacgtcgtccactgctccctcgacgtcatcgacgagcgag 234
             |||||||| |||||||||||||||||||||||||||||||
Sbjct: 52285 cacgtcgtgcactgctccctcgacgtcatcgacgagcgag 52246



 Score =  111 bits (56), Expect = 3e-21
 Identities = 77/84 (91%)
 Strand = Plus / Minus

                                                                         
Query: 233   agtgaacaatcctaaaaggagcgcacctacactgaacgagacatttttgggtcttctata 292
             ||||||||||||||||||||  || ||| |||| ||||||||||||||||||||||||||
Sbjct: 51774 agtgaacaatcctaaaaggaatgcgcctgcacttaacgagacatttttgggtcttctata 51715

                                     
Query: 293   tcctaccgagaactacaaagtgta 316
             ||| |||||||| |||||||||||
Sbjct: 51714 tccgaccgagaattacaaagtgta 51691



 Score =  109 bits (55), Expect = 1e-20
 Identities = 112/131 (85%)
 Strand = Plus / Minus

                                                                         
Query: 396   tttttcaggaagttccatgctgcatacgtggatgccgtctcgaaccctttccacgtccct 455
             |||||||||||||||||||||||||| || || || || |||||||| || ||||| || 
Sbjct: 50954 tttttcaggaagttccatgctgcatatgtagacgctgtttcgaacccctttcacgttcca 50895

                                                                         
Query: 456   gggaagaagatcgcgtcgagaagcttcggcgcgagagtgagcaccatagtgaaatccttt 515
             ||||||||||| ||||| |||||||| || || ||||| ||||| || ||||||||||| 
Sbjct: 50894 gggaagaagattgcgtcaagaagctttggtgcaagagtaagcacaattgtgaaatccttc 50835

                        
Query: 516   ggctcagggac 526
             || ||||||||
Sbjct: 50834 ggttcagggac 50824



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                         
Query: 314   gtatggctatttgacaaacacaaaggtcaaatttttaatggttacaactgatcttgatgt 373
             ||||||||||||||| ||||| |||||||||||| | ||||| |||||||||||||||||
Sbjct: 51370 gtatggctatttgactaacacgaaggtcaaatttatcatggtcacaactgatcttgatgt 51311

                                   
Query: 374   gaaagatgcggatgcccgaaat 395
              |||||||| |||||| |||||
Sbjct: 51310 caaagatgcagatgccagaaat 51289



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                                
Query: 99    ggaaacatgatcgtctgcgtcgccgtcgtcggcca 133
             |||||||||||||||||||||||||||||||||||
Sbjct: 52509 ggaaacatgatcgtctgcgtcgccgtcgtcggcca 52475
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>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence
          Length = 317137

 Score =  133 bits (67), Expect = 8e-28
 Identities = 82/87 (94%)
 Strand = Plus / Minus

                                                                          
Query: 148    tgtacctccagagcttcacggaggcggacgacgccctcaagctccaccacgtcgtccact 207
              ||||||| || ||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 253688 tgtacctgcatagcttcacggaggcggacgacgccctcaagctccaccacatcgttcact 253629

                                         
Query: 208    gctccctcgacgtcatcgacgagcgag 234
               ||||||||||||||||||||||||||
Sbjct: 253628 actccctcgacgtcatcgacgagcgag 253602



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                          
Query: 233    agtgaacaatcctaaaaggagcgcacctacactgaacgagacatttttgggtcttctata 292
              |||||||||| |||||||||| || |||||  |||| |||||||||||||||||||| ||
Sbjct: 253338 agtgaacaatactaaaaggagtgcgcctacgttgaatgagacatttttgggtcttctgta 253279

                               
Query: 293    tcctaccgagaactaca 309
               || || ||||||||||
Sbjct: 253278 cccaactgagaactaca 253262
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>gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map mi148, complete
             sequence
          Length = 129667

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                         
Query: 135   cagaacaacccgctgtacctccagagcttcacggaggcggacgacgccctcaagctccac 194
             |||||||| ||||| ||| | || ||||||||||| || ||||| || ||||||||||||
Sbjct: 30170 cagaacaatccgctttacatacaaagcttcacggatgctgacgatgctctcaagctccac 30229

                                                     
Query: 195   cacgtcgtccactgctccctcgacgtcatcgacgagcgag 234
             ||| | || || |||||||| || |||||||| |||||||
Sbjct: 30230 cacattgttcattgctcccttgatgtcatcgaagagcgag 30269



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                         
Query: 399   ttcaggaagttccatgctgcatacgtggatgccgtctcgaaccctttccacgtccctggg 458
             |||||||||||||||||||| ||||| ||||| ||||| ||||| || || |||||||| 
Sbjct: 30780 ttcaggaagttccatgctgcttacgttgatgcagtctcaaacccctttcatgtccctggc 30839

                     
Query: 459   aagaagat 466
             || |||||
Sbjct: 30840 aaaaagat 30847



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                              
Query: 105   atgatcgtctgcgtcgccgtcgtcggccaccag 137
             |||||||| ||||||||||||||||||||||||
Sbjct: 30042 atgatcgtttgcgtcgccgtcgtcggccaccag 30074
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>dbj|AK174119.1| Ciona intestinalis cDNA, clone:ciad092d15, full insert sequence
          Length = 1020

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 318 ggctatttgacaaacacaaaggtcaaatttttaatggtt 356
           |||||| ||||||||||||||||||| ||| ||||||||
Sbjct: 329 ggctatgtgacaaacacaaaggtcaagtttgtaatggtt 367
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 336     aaggtcaaatttttaatggtt 356
               |||||||||||||||||||||
Sbjct: 5459611 aaggtcaaatttttaatggtt 5459631



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 336     aaggtcaaatttttaatggtt 356
               |||||||||||||||||||||
Sbjct: 4944543 aaggtcaaatttttaatggtt 4944563



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 222     atcgacgagcgagtgaacaa 241
               ||||||||||||||||||||
Sbjct: 9141849 atcgacgagcgagtgaacaa 9141868
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>gb|AF146567.1|AF146567 Mycobacterium tuberculosis RNA polymerase beta subunit (rpoB) gene,
           partial cds
          Length = 147

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 130 gccaccagaacaacccgctgt 150
           |||||||||||||||||||||
Sbjct: 41  gccaccagaacaacccgctgt 61
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>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1015E06
          Length = 164583

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 336   aaggtcaaatttttaatggtt 356
             |||||||||||||||||||||
Sbjct: 56451 aaggtcaaatttttaatggtt 56471
to top
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1210_A07
          Length = 131394

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 115   gcgtcgccgtcgtcggccaccagaa 139
             ||||||||||||||||| |||||||
Sbjct: 15972 gcgtcgccgtcgtcggctaccagaa 15948
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>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0671B11
          Length = 168372

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 336   aaggtcaaatttttaatggtt 356
             |||||||||||||||||||||
Sbjct: 44996 aaggtcaaatttttaatggtt 45016
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>emb|CT025626.11| Mouse DNA sequence from clone RP24-141G14 on chromosome 14, complete
            sequence
          Length = 201441

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 608  tgttgaacaagaaatagtttg 628
            |||||||||||||||||||||
Sbjct: 4181 tgttgaacaagaaatagtttg 4201
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>gb|AC125267.18| Mus musculus chromosome 10, clone RP24-483E18, complete sequence
          Length = 203922

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 609    gttgaacaagaaatagtttg 628
              ||||||||||||||||||||
Sbjct: 133635 gttgaacaagaaatagtttg 133654
to top
>gb|AC168273.3| Mus musculus  BAC RP23-184H4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 202998

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 609    gttgaacaagaaatagtttg 628
              ||||||||||||||||||||
Sbjct: 111795 gttgaacaagaaatagtttg 111776
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>gb|AC007862.7| Trypanosoma brucei chromosome 2 clone RPCI93-10C8, complete sequence
          Length = 150671

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 465    atcgcgtcgagaagcttcgg 484
              ||||||||||||||||||||
Sbjct: 112013 atcgcgtcgagaagcttcgg 112032
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>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 465    atcgcgtcgagaagcttcgg 484
              ||||||||||||||||||||
Sbjct: 590417 atcgcgtcgagaagcttcgg 590436
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>gb|AC154528.2| Mus musculus BAC clone RP23-460I18 from chromosome 14, complete
             sequence
          Length = 207430

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 609   gttgaacaagaaatagtttg 628
             ||||||||||||||||||||
Sbjct: 10018 gttgaacaagaaatagtttg 9999
to top
>ref|XM_872624.1| PREDICTED: Bos taurus similar to steroid-sensitive protein 1,
           transcript variant 2 (LOC515235), mRNA
          Length = 3759

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  ccggccggccgacagcgctg 78
           ||||||||||||||||||||
Sbjct: 443 ccggccggccgacagcgctg 424
to top
>ref|XM_593217.2| PREDICTED: Bos taurus similar to steroid-sensitive protein 1,
           transcript variant 1 (LOC515235), mRNA
          Length = 4390

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  ccggccggccgacagcgctg 78
           ||||||||||||||||||||
Sbjct: 443 ccggccggccgacagcgctg 424
to top
>ref|XM_946487.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.2.3180)
            partial mRNA
          Length = 3012

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 465  atcgcgtcgagaagcttcgg 484
            ||||||||||||||||||||
Sbjct: 2720 atcgcgtcgagaagcttcgg 2739
to top
>gb|AC121881.3| Mus musculus BAC clone RP24-134L8 from chromosome 8, complete sequence
          Length = 184359

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   atgtgaaagatgcggatgcc 389
             ||||||||||||||||||||
Sbjct: 44052 atgtgaaagatgcggatgcc 44071
to top
>gb|AF100656.1| Caenorhabditis elegans cosmid F49F1, complete sequence
          Length = 34334

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   ctccaccacgtcgtccactg 208
             ||||||||||||||||||||
Sbjct: 29954 ctccaccacgtcgtccactg 29973
to top
>emb|AL390834.24| Human DNA sequence from clone RP11-468L18 on chromosome 10 Contains an
             unactive progesterone receptor, 23 kD (TEBP) pseudogene,
             complete sequence
          Length = 124557

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 325   tgacaaacacaaaggtcaaatttt 348
             ||||||| ||||||||||||||||
Sbjct: 85640 tgacaaagacaaaggtcaaatttt 85617
to top
>emb|AL354696.11| Human DNA sequence from clone RP11-74J13 on chromosome 13 Contains a
              novel gene (FLJ30271, FLJ13413, DKFZp547M073), a calmodulin
              pseudogene, a novel gene (DKFZP434E2318), the MTFR1 gene
              for mitochondrial translational release factor 1 (RF1,
              MTTRF1), a ras homolog gene family, member G (rho G) (ARHG)
              pseudogene, the 5' end of the gene for a novel TPR domain
              containing protein and 3 CpG islands, complete sequence
          Length = 202565

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 336    aaggtcaaatttttaatggttaca 359
              |||||||||||||||||| |||||
Sbjct: 173099 aaggtcaaatttttaatgtttaca 173076
to top
>gb|AF520420.1| Mus musculus c222389 pseudogene, complete sequence; nuclear receptor 2E1
              (Nr2e1) and sorting nexin 3 (Snx3) genes, complete cds; and
              lactation elevated 1 (Lace1) gene, partial cds
          Length = 187196

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 609    gttgaacaagaaatagtttg 628
              ||||||||||||||||||||
Sbjct: 184893 gttgaacaagaaatagtttg 184874
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 109     tcgtctgcgtcgccgtcgtcggcc 132
               ||||||||||||||||| ||||||
Sbjct: 1149250 tcgtctgcgtcgccgtcttcggcc 1149227
to top
>ref|NM_068091.1| Caenorhabditis elegans F49F1.11 (F49F1.11) mRNA, complete cds
          Length = 906

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 ctccaccacgtcgtccactg 208
           ||||||||||||||||||||
Sbjct: 214 ctccaccacgtcgtccactg 195
to top
>ref|NM_060483.1| Caenorhabditis elegans F46A8.4 (F46A8.4) mRNA, complete cds
          Length = 666

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 ctccaccacgtcgtccactg 208
           ||||||||||||||||||||
Sbjct: 142 ctccaccacgtcgtccactg 123
to top
>ref|NM_060484.2| Caenorhabditis elegans F46A8.3 (F46A8.3) mRNA, complete cds
          Length = 701

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 ctccaccacgtcgtccactg 208
           ||||||||||||||||||||
Sbjct: 214 ctccaccacgtcgtccactg 195
to top
>gb|AC155912.7| Mus musculus 10 BAC RP24-536C12 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 141692

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 367   ttgatgtgaaagatgcggatgccc 390
             ||||||||||||||| ||||||||
Sbjct: 28928 ttgatgtgaaagatgaggatgccc 28905
to top
>gb|AF293442.1|AF293442 Streptomyces sp. R1128 biosynthetic gene cluster, complete sequence
          Length = 17200

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 116  cgtcgccgtcgtcggccaccagaa 139
            |||||||||| |||||||||||||
Sbjct: 7834 cgtcgccgtcatcggccaccagaa 7811
to top
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0011D01
          Length = 168655

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   atcgacgagcgagtgaacaa 241
             ||||||||||||||||||||
Sbjct: 42231 atcgacgagcgagtgaacaa 42250
to top
>gb|AE005119.1| Halobacterium sp. NRC-1 section 150 of 170 of the complete genome
          Length = 11867

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 116  cgtcgccgtcgtcggccacc 135
            ||||||||||||||||||||
Sbjct: 8769 cgtcgccgtcgtcggccacc 8750
to top
>emb|Z81539.1|CEF46A8 Caenorhabditis elegans Cosmid F46A8, complete sequence
          Length = 17015

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 189  ctccaccacgtcgtccactg 208
            ||||||||||||||||||||
Sbjct: 7611 ctccaccacgtcgtccactg 7630



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 189  ctccaccacgtcgtccactg 208
            ||||||||||||||||||||
Sbjct: 6133 ctccaccacgtcgtccactg 6152
to top
>gb|AC174647.2| Mus musculus BAC clone RP23-25C24 from chromosome 14, complete sequence
          Length = 238300

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 609   gttgaacaagaaatagtttg 628
             ||||||||||||||||||||
Sbjct: 72585 gttgaacaagaaatagtttg 72604
to top
>gb|DQ120623.1| Hylobates lar eFI-2-gamma gene, partial cds
          Length = 1413

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 363 gatcttgatgtgaaagatgcggatgccc 390
           |||| ||||||||||||||||| |||||
Sbjct: 58  gatcctgatgtgaaagatgcggctgccc 31
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>emb|AL671890.11| Mouse DNA sequence from clone RP23-408A13 on chromosome X, complete
             sequence
          Length = 198788

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 609   gttgaacaagaaatagtttg 628
             ||||||||||||||||||||
Sbjct: 87286 gttgaacaagaaatagtttg 87305


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,751,314
Number of Sequences: 3902068
Number of extensions: 4751314
Number of successful extensions: 91340
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91075
Number of HSP's gapped (non-prelim): 260
length of query: 636
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 613
effective length of database: 17,143,297,704
effective search space: 10508841492552
effective search space used: 10508841492552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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