>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
          Length = 153766

 Score =  242 bits (122), Expect = 9e-61
 Identities = 230/266 (86%)
 Strand = Plus / Minus

                                                                         
Query: 3     gtgtgtgaaagaattgaacatggctatgagaggcaacaatgtcaagaccttggccatgat 62
             ||||||||||||| |||||||||| |||||||||||||||||||||||||||||  ||||
Sbjct: 95271 gtgtgtgaaagaactgaacatggccatgagaggcaacaatgtcaagaccttggcgttgat 95212

                                                                         
Query: 63    actcctagttctgggtcttgtggccatggagcgaacccagcaagcgcaagcctcccattg 122
              ||| ||||| |||||||||||||  |  ||| |||||||||||  ||||| ||||| ||
Sbjct: 95211 gctcgtagttgtgggtcttgtggcactccagcaaacccagcaagtacaagcatcccactg 95152

                                                                         
Query: 123   ctgttgtcatctagactcggtccctacctattttgactgccgcgccaaatctgatagcac 182
              ||||| ||||||||||| ||||||||||| ||| | |||||||  ||||||||||||||
Sbjct: 95151 ttgttgccatctagactccgtccctacctactttaagtgccgcgagaaatctgatagcac 95092

                                                                         
Query: 183   tgtctcagagtgctgcggtgtttccgccggctatatatcaaacgacgctggaactgaatg 242
              ||||||||||||||||||  ||| |  |||||||||||| ||| |||||||  ||||||
Sbjct: 95091 cgtctcagagtgctgcggttcttctgatggctatatatcagacgccgctggatttgaatg 95032

                                       
Query: 243   caagtccggttatattgatatagaga 268
             ||||||||||| ||| ||||||||||
Sbjct: 95031 caagtccggttttatagatatagaga 95006



 Score =  194 bits (98), Expect = 2e-46
 Identities = 140/154 (90%)
 Strand = Plus / Minus

                                                                         
Query: 340   gggaacgatgccatggaacgctgcaccagtgaatgccacgatctgtgcaccaagaacggt 399
             ||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||  |
Sbjct: 94313 gggaaagatgccatggaacgctgcactagtggatgccacgatctgtgcaccaagaacaat 94254

                                                                         
Query: 400   gtggaaattgcacaagtcgtcgtggcttaactagttatggcaaggagctgcatcggacaa 459
             |  |||||||| |||||||||   ||||||||||||||| ||| |||||||||| |||||
Sbjct: 94253 gccgaaattgcgcaagtcgtcacagcttaactagttatgccaacgagctgcatctgacaa 94194

                                               
Query: 460   gcccgccaaggagtgtttgtgttgccttcaataa 493
             ||||||||||||||||||||||||||||||||||
Sbjct: 94193 gcccgccaaggagtgtttgtgttgccttcaataa 94160



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                        
Query: 283   gtcaactactgcaagttggggtgcacggcttccttgtgtaacaaagtaactccatctgg 341
             ||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 94603 gtcaactactgcaagctggggtgcaaggcttccttgtgcaacaaagtaactccatctgg 94545



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                        
Query: 283   gtcaactactgcaagttggggtgcacggcttccttgtgtaacaaagtaactccatctgg 341
             ||||||||||||||| ||||||||||||||||| |||| |||| | ||||| |||||||
Sbjct: 90330 gtcaactactgcaagctggggtgcacggcttccgtgtgcaacacattaacttcatctgg 90272



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 464   gccaaggagtgtttgtgttgccttcaataactggatgtcgcatc 507
             ||||||||||| || ||||| ||||||||| ||| |||| ||||
Sbjct: 89697 gccaaggagtgattatgttgtcttcaataattgggtgtcacatc 89654

>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome
              condensation factor (CCF), putative resistance protein
              (RGA-2), putative resistance protein (RGA2) and putative
              nodulin-like-like protein (NLL) gene, complete cds; and
              retrotransposons Josephine, Angela-2, Angela-4, Heidi,
              Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5,
              Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                     
Query: 464    gccaaggagtgtttgtgttgccttcaataactggatgtc 502
              |||||||||||||| ||||||||||||||| ||||||||
Sbjct: 181728 gccaaggagtgtttatgttgccttcaataattggatgtc 181690



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 96     aacccagcaagcgcaagcctcccattgctgttg 128
              |||||||||||| ||||| |||||||| |||||
Sbjct: 179399 aacccagcaagcacaagcttcccattgttgttg 179367



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 458    aagcccgccaaggagtgtttgtgttgccttca 489
              ||||| ||||||||||| || |||||||||||
Sbjct: 179200 aagccagccaaggagtgcttatgttgccttca 179169

>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence
          Length = 223991

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 113    cctcccattgctgttgtcatc 133
              |||||||||||||||||||||
Sbjct: 198784 cctcccattgctgttgtcatc 198804

>emb|BX908747.25| Zebrafish DNA sequence from clone DKEY-58J15 in linkage group 1,
            complete sequence
          Length = 232503

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 306  cacggcttccttgtgtaacaa 326
            |||||||||||||||||||||
Sbjct: 9555 cacggcttccttgtgtaacaa 9575

>gb|AC147558.3| Mus musculus BAC clone RP23-470N2 from 8, complete sequence
          Length = 212626

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    cctcccattgctgttgtcatc 133
              |||||||||||||||||||||
Sbjct: 164889 cctcccattgctgttgtcatc 164869

>gb|AC120364.7| Mus musculus chromosome 8, clone RP24-291F20, complete sequence
          Length = 193257

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      gtgtgtgaaagaattgaaca 22
              ||||||||||||||||||||
Sbjct: 142825 gtgtgtgaaagaattgaaca 142844

>gb|AC158385.4| Mus musculus chromosome 8, clone RP24-247P24, complete sequence
          Length = 148656

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      gtgtgtgaaagaattgaaca 22
              ||||||||||||||||||||
Sbjct: 129029 gtgtgtgaaagaattgaaca 129010

>gb|AY326313.1| Paenibacillus sp. Dex70-34 RNA binding protein-like protein gene,
            partial cds; dextranase 1 (dex1) gene, complete cds; and
            methyl-accepting chemotaxis protein histidine kinase
            gene, partial cds
          Length = 4615

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  tgggaacgatgccatggaac 358
            ||||||||||||||||||||
Sbjct: 4363 tgggaacgatgccatggaac 4344

>gb|AC108797.8| Mus musculus chromosome 3, clone RP23-349M18, complete sequence
          Length = 208211

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   gctggaactgaatgcaagtc 248
             ||||||||||||||||||||
Sbjct: 99166 gctggaactgaatgcaagtc 99147

>emb|AL022343.6|HS608E8 Human DNA sequence from clone RP4-608E8 on chromosome 6p22.1-22.3
             Contains the 5' end of the DTNBP1 gene for dystobrevin
             binding protein 1 and a CpG island, complete sequence
          Length = 92143

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     tgaaagaattgaacatggct 27
             ||||||||||||||||||||
Sbjct: 79605 tgaaagaattgaacatggct 79624

>emb|AL831748.7| Zebrafish DNA sequence from clone DKEY-70P6 in linkage group 17
             Contains two novel genes, a novel gene similar to human
             and mouse URKL1 (uridine kinase-like 1), a novel gene
             similar to vertebrate SYP (synaptophysin), a novel gene
             similar to vertebrate CACNA1 (voltage-dependent calcium
             channel P/Q type alpha 1 subunit), a novel pseudogene
             similar to human and mouse EMILIN2 (elastin microfibril
             interfacer 2) and a CpG island, complete sequence
          Length = 202357

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    tcaagaccttggccatgata 63
             ||||||||||||||||||||
Sbjct: 91155 tcaagaccttggccatgata 91174

>emb|BX649575.18| Zebrafish DNA sequence from clone CH211-215H12 in linkage group 8,
              complete sequence
          Length = 171493

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     tcaagaccttggccatgata 63
              ||||||||||||||||||||
Sbjct: 141592 tcaagaccttggccatgata 141611

>gb|AC106882.5| Homo sapiens BAC clone RP11-768B22 from 4, complete sequence
          Length = 176692

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   ttgatatagagaaagtttca 276
             ||||||||||||||||||||
Sbjct: 31302 ttgatatagagaaagtttca 31283

>ref|XM_682982.1| PREDICTED: Danio rerio similar to elastin microfibril interfacer 3
           (LOC559624), mRNA
          Length = 2976

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 44  tcaagaccttggccatgata 63
           ||||||||||||||||||||
Sbjct: 936 tcaagaccttggccatgata 955

>ref|XM_694010.1| PREDICTED: Danio rerio similar to elastin microfibril interfacer 3
            (LOC570521), mRNA
          Length = 3321

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   tcaagaccttggccatgata 63
            ||||||||||||||||||||
Sbjct: 1218 tcaagaccttggccatgata 1237

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    tcggacaagcccgccaagga 471
              ||||||||||||||||||||
Sbjct: 107653 tcggacaagcccgccaagga 107672


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,547,046
Number of Sequences: 3902068
Number of extensions: 3547046
Number of successful extensions: 55774
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55733
Number of HSP's gapped (non-prelim): 41
length of query: 507
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 485
effective length of database: 17,147,199,772
effective search space: 8316391889420
effective search space used: 8316391889420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)