ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags22i06 |
|---|---|
| Clone Library Name | barley_pub |
>SPL11_ORYSA (Q64HA9) Spotted leaf protein 11 (Spotted leaf11) (Cell| death-related protein SPL11) Length = 694 Score = 65.1 bits (157), Expect = 1e-10 Identities = 36/61 (59%), Positives = 42/61 (68%) Frame = +2 Query: 404 LIDDLKSDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQENAVT 583 L+ L S E QRSA +E+RLLAK N NRI IA GAI LL+ LL SSD + QE+AVT Sbjct: 372 LLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVT 431 Query: 584 A 586 A Sbjct: 432 A 432
>PUB14_ARATH (Q8VZ40) E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical U-box| domain protein 14) Length = 632 Score = 63.5 bits (153), Expect = 4e-10 Identities = 33/64 (51%), Positives = 45/64 (70%) Frame = +2 Query: 395 VRKLIDDLKSDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQEN 574 V L++ L + + E QR+A E+RLLAK N++NR+ IA GAI LLV LL S D + QE+ Sbjct: 347 VLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEH 406 Query: 575 AVTA 586 +VTA Sbjct: 407 SVTA 410 Score = 34.7 bits (78), Expect = 0.21 Identities = 19/64 (29%), Positives = 38/64 (59%) Frame = +2 Query: 395 VRKLIDDLKSDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQEN 574 + +++ LK+ S+EA+ +A + + L+ + EN++ I GAI L+ LL + +++ Sbjct: 430 ITDIVEVLKNGSMEARENAAATLFSLSVID-ENKVAIGAAGAIQALISLLEEGTRRGKKD 488 Query: 575 AVTA 586 A TA Sbjct: 489 AATA 492
>VAC8_YEAST (P39968) Vacuolar protein 8| Length = 577 Score = 40.8 bits (94), Expect = 0.003 Identities = 24/56 (42%), Positives = 32/56 (57%) Frame = +2 Query: 419 KSDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQENAVTA 586 KS I QR+AT + L H+ ENR + N GA+ +LV LL S+D +Q TA Sbjct: 176 KSKHIRVQRNATGAL-LNMTHSEENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTA 230
>CTND2_HUMAN (Q9UQB3) Catenin delta-2 (Delta-catenin) (Neural| plakophilin-related ARM-repeat protein) (NPRAP) (Neurojungin) (GT24) Length = 1225 Score = 36.6 bits (83), Expect = 0.055 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%) Frame = +2 Query: 395 VRKLIDDLKSDSIEAQRSATSEIRLLA--KHNMENRIVIANCGAINLLVGLLH-SSDAKI 565 ++ L+D L E RSA +R L K N +N+I + NCG I LV LL ++D +I Sbjct: 594 IQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNKIALKNCGGIPALVRLLRKTTDLEI 653 Query: 566 QE 571 +E Sbjct: 654 RE 655
>CTND2_MOUSE (O35927) Catenin delta-2 (Neural plakophilin-related ARM-repeat| protein) (NPRAP) (Neurojungin) Length = 1247 Score = 36.6 bits (83), Expect = 0.055 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%) Frame = +2 Query: 395 VRKLIDDLKSDSIEAQRSATSEIRLLA--KHNMENRIVIANCGAINLLVGLLH-SSDAKI 565 ++ L+D L E RSA +R L K N +N+I + NCG I LV LL ++D +I Sbjct: 591 IQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNKIALKNCGGIPALVRLLRKTTDLEI 650 Query: 566 QE 571 +E Sbjct: 651 RE 652
>CTND2_RAT (O35116) Catenin delta-2 (Fragment)| Length = 264 Score = 36.6 bits (83), Expect = 0.055 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%) Frame = +2 Query: 395 VRKLIDDLKSDSIEAQRSATSEIRLLA--KHNMENRIVIANCGAINLLVGLLH-SSDAKI 565 ++ L+D L E RSA +R L K N +N+I + NCG I LV LL ++D +I Sbjct: 32 IQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNKIALKNCGGIPALVRLLRKTTDLEI 91 Query: 566 QE 571 +E Sbjct: 92 RE 93
>IP3KA_HUMAN (P23677) Inositol-trisphosphate 3-kinase A (EC 2.7.1.127) (Inositol| 1,4,5-trisphosphate 3-kinase A) (IP3K A) (IP3 3-kinase A) Length = 461 Score = 34.7 bits (78), Expect = 0.21 Identities = 30/116 (25%), Positives = 45/116 (38%) Frame = +2 Query: 83 GSSSVNGSLPNSGQLDGECDNDNGMVRVPGDRTNYSSDASGEVADGGPSVSSAPQRENVM 262 G G+ GQ+ NG+ R P + E D P+ P+RE Sbjct: 52 GEPRARGAKRRGGQVP------NGLPRAPPAPVIPQLTVTAEEPDVPPTSPGPPERERDC 105 Query: 263 LPRLGDVRMRGQFVRRQPSDRGFPRILSSSSMDARGDLSAIENQVRKLIDDLKSDS 430 LP G ++ PR LS+SS+ + G S +E+ L+ D +S S Sbjct: 106 LPAAGSSHLQQ------------PRRLSTSSVSSTGSSSLLEDSEDDLLSDSESRS 149
>EPN4_MOUSE (Q99KN9) Epsin-4 (Epsin-related protein) (EpsinR) (Enthoprotin)| Length = 631 Score = 34.3 bits (77), Expect = 0.27 Identities = 24/66 (36%), Positives = 30/66 (45%) Frame = +2 Query: 50 SLSNGDSQDHVGSSSVNGSLPNSGQLDGECDNDNGMVRVPGDRTNYSSDASGEVADGGPS 229 S S G S D G + GS SG + + NG GD + ++ SG VA GG Sbjct: 342 SQSAGGSADLFGGFADFGSAAASGNFPSQATSGNGDF---GDWSAFNQAPSGPVASGGEL 398 Query: 230 VSSAPQ 247 SAPQ Sbjct: 399 FGSAPQ 404
>GRP75_CRIGR (O35501) Stress-70 protein, mitochondrial precursor (75 kDa| glucose-regulated protein) (GRP 75) Length = 679 Score = 32.7 bits (73), Expect = 0.80 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 11/110 (10%) Frame = +2 Query: 275 GDVRMRGQF--VRRQPSDRGFPRILSSSSMDARGDL--------SAIENQ-VRKLIDDLK 421 GD ++ GQF + P+ RG P+I + +DA G + + E Q V + L Sbjct: 495 GDNKLLGQFTLIGIPPAPRGVPQIEVTFDLDANGIVHVSAKDKGTGREQQIVIQSSGGLS 554 Query: 422 SDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQE 571 D IE + ++ K+ E+R A+N+ G++H ++ K++E Sbjct: 555 KDDIE------NMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKMEE 598
>GRP75_MOUSE (P38647) Stress-70 protein, mitochondrial precursor (75 kDa| glucose-regulated protein) (GRP 75) (Peptide-binding protein 74) (PBP74) (P66 MOT) (Mortalin) Length = 679 Score = 32.3 bits (72), Expect = 1.0 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 11/110 (10%) Frame = +2 Query: 275 GDVRMRGQF--VRRQPSDRGFPRILSSSSMDARGDL--------SAIENQ-VRKLIDDLK 421 GD ++ GQF + P+ RG P+I + +DA G + + E Q V + L Sbjct: 495 GDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLS 554 Query: 422 SDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQE 571 D IE + ++ K+ E+R A+N+ G++H ++ K++E Sbjct: 555 KDDIE------NMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKMEE 598
>GRP75_HUMAN (P38646) Stress-70 protein, mitochondrial precursor (75 kDa| glucose-regulated protein) (GRP 75) (Peptide-binding protein 74) (PBP74) (Mortalin) (MOT) Length = 679 Score = 32.3 bits (72), Expect = 1.0 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 11/110 (10%) Frame = +2 Query: 275 GDVRMRGQF--VRRQPSDRGFPRILSSSSMDARGDL--------SAIENQ-VRKLIDDLK 421 GD ++ GQF + P+ RG P+I + +DA G + + E Q V + L Sbjct: 495 GDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLS 554 Query: 422 SDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQE 571 D IE + ++ K+ E+R A+N+ G++H ++ K++E Sbjct: 555 KDDIE------NMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKMEE 598
>PININ_MOUSE (O35691) Pinin| Length = 725 Score = 32.3 bits (72), Expect = 1.0 Identities = 38/159 (23%), Positives = 58/159 (36%), Gaps = 6/159 (3%) Frame = +2 Query: 2 HEANFSKNRRRKHFKXSLSNGDSQDHVGSSSVNGSLPNSGQLDGECDNDNGMVRVPGDRT 181 H N SKN+ R + N S+ SSS + S +S + +G + Sbjct: 557 HSENKSKNKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSS 616 Query: 182 NYSSDASGEVADGGPSVSSAPQRENVMLPR--LGDVRMRGQFVRRQPSDRGFPRILSS-- 349 + SS + D S SS+ + + R D + R R++ G R S Sbjct: 617 SSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSMDRKRRDTSGLERSHKSSK 676 Query: 350 --SSMDARGDLSAIENQVRKLIDDLKSDSIEAQRSATSE 460 SS D +G RK + S +RS+ SE Sbjct: 677 GGSSRDRKGSKDKSSRPDRK--RSISESSRSGKRSSRSE 713
>LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG| Length = 931 Score = 32.0 bits (71), Expect = 1.4 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 5/124 (4%) Frame = +2 Query: 83 GSSSVNGSLPNSGQLDGEC-DNDNGMVRVPGDRTNYSSDASGEVADGGPSVSSAPQRENV 259 GS +++GS+ NS + + + N +G R ++ +++SG GPS SSAP + Sbjct: 499 GSITMDGSISNSFRGNEQVLKNQSGRKRKQPVSSSGPANSSGTANTAGPSPSSAPSTPST 558 Query: 260 MLPRLGDVRMRGQFVRRQPSDRGFPRILSSSSMDARGDLSAIENQV----RKLIDDLKSD 427 P GDV + P G + + + G L++ NQ+ R + D D Sbjct: 559 HTP--GDVIS----MPNLPHSGGSSKSMMMFGTEGTGTLTSPSNQLADMDRFVEDGSLDD 612 Query: 428 SIEA 439 ++E+ Sbjct: 613 NVES 616
>FOXJ2_MOUSE (Q9ES18) Forkhead box protein J2 (Fork head homologous X)| Length = 565 Score = 32.0 bits (71), Expect = 1.4 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%) Frame = +2 Query: 23 NRRRKHFKXSLSNGDSQDHVGSSSVNGSLPNSGQLDGECDNDNGM-VRVPGDRTNYSSDA 199 +R+R+H + DS + S S G +P SG+ + M ++ P NYS Sbjct: 149 SRKRRHPPDDDLSQDSPEQEASKSPRGGVPGSGEASLSHEGTPQMSLQSPSSVANYSQGP 208 Query: 200 SGEVADGGPSVSSAPQREN 256 DGG + AP +E+ Sbjct: 209 GS--VDGGAVAAGAPGQES 225
>VRP1_YEAST (P37370) Verprolin| Length = 817 Score = 31.6 bits (70), Expect = 1.8 Identities = 22/71 (30%), Positives = 34/71 (47%) Frame = +2 Query: 83 GSSSVNGSLPNSGQLDGECDNDNGMVRVPGDRTNYSSDASGEVADGGPSVSSAPQRENVM 262 G ++ G + +L ND V G + +S +SG V+ GPS+ SAP + Sbjct: 30 GRDALLGDIRKGMKLKKAETNDRSAPIVGGGVVSSASGSSGTVSSKGPSM-SAPPIPGMG 88 Query: 263 LPRLGDVRMRG 295 P+LGD+ G Sbjct: 89 APQLGDILAGG 99
>HIF1_YEAST (Q12373) HAT1-interacting factor 1| Length = 385 Score = 31.2 bits (69), Expect = 2.3 Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 7/80 (8%) Frame = +2 Query: 41 FKXSLSNGDSQDHVGSSSVNGSLPNSGQLDGECDNDNGMVRVPGDR----TNYSSDASGE 208 F +L GD GS S + S P S +GE N+NG +P R D +G+ Sbjct: 83 FGDALLAGDD----GSGSESESEPESDVSNGEEGNENGQTEIPNSRMFQFDQEEEDLTGD 138 Query: 209 VADGGPSVS---SAPQRENV 259 V G S S + ENV Sbjct: 139 VDSGDSEDSGEGSEEEEENV 158
>GRP75_CHICK (Q5ZM98) Stress-70 protein, mitochondrial precursor (75 kDa glucose| regulated protein) (GRP 75) Length = 675 Score = 31.2 bits (69), Expect = 2.3 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 11/109 (10%) Frame = +2 Query: 278 DVRMRGQF--VRRQPSDRGFPRILSSSSMDARGDL--------SAIENQ-VRKLIDDLKS 424 D ++ GQF V P+ RG P+I + +DA G + + E Q V + L Sbjct: 498 DNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSK 557 Query: 425 DSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQE 571 D IE + ++ K+ E+R A+NL G++H +++K++E Sbjct: 558 DEIE------NMVKNAEKYAEEDRRRKERVEAVNLAEGIIHDTESKMEE 600
>APC_HUMAN (P25054) Adenomatous polyposis coli protein (Protein APC)| Length = 2843 Score = 30.4 bits (67), Expect = 4.0 Identities = 17/66 (25%), Positives = 34/66 (51%) Frame = +2 Query: 389 NQVRKLIDDLKSDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQ 568 N ++ L+ LKS S+ +A + L+ N +++ + + GA+++L L+HS I Sbjct: 660 NCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIA 719 Query: 569 ENAVTA 586 + A Sbjct: 720 MGSAAA 725
>TIPE_DROME (P48613) Protein tipE (Temperature-induced paralytic E)| Length = 452 Score = 30.4 bits (67), Expect = 4.0 Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 1/107 (0%) Frame = +2 Query: 140 DNDNGMVRVPGDRTNYSSDASGEVADGGPSVSSAPQRENVMLPRLGDVRMRGQFVRRQPS 319 DN G + D T S G + +GGP ++++ + + G V G ++ + P Sbjct: 337 DNVAGSQIINMDSTTNDSCLEGVLPNGGPGMTAS-------ISQGGSVTTPGPYIAQSP- 388 Query: 320 DRGFPRILSSSSMDARGDLSAIENQVR-KLIDDLKSDSIEAQRSATS 457 + S M ++++ +Q++ ++ D+L DS+E +TS Sbjct: 389 --------AGSQMTPNSEINSFGHQLKVQMADELSRDSLENGAISTS 427
>APC_MOUSE (Q61315) Adenomatous polyposis coli protein (Protein APC) (mAPC)| Length = 2845 Score = 30.4 bits (67), Expect = 4.0 Identities = 17/66 (25%), Positives = 34/66 (51%) Frame = +2 Query: 389 NQVRKLIDDLKSDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQ 568 N ++ L+ LKS S+ +A + L+ N +++ + + GA+++L L+HS I Sbjct: 658 NCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIA 717 Query: 569 ENAVTA 586 + A Sbjct: 718 MGSAAA 723
>GON4L_RAT (Q535K8) GON-4-like protein (Protein GON4) (GON-4 homolog)| Length = 2256 Score = 30.4 bits (67), Expect = 4.0 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = +2 Query: 212 ADGGPSVSSAPQRENVMLPRLGDVRMRGQFVRRQPSDR 325 + P SSAP+ +MLP LG + R +VRR+P+ R Sbjct: 1098 SQSAPPSSSAPK---LMLPSLGPSKFRKPYVRRKPTRR 1132
>APC_RAT (P70478) Adenomatous polyposis coli protein (Protein APC)| Length = 2842 Score = 30.4 bits (67), Expect = 4.0 Identities = 17/66 (25%), Positives = 34/66 (51%) Frame = +2 Query: 389 NQVRKLIDDLKSDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQ 568 N ++ L+ LKS S+ +A + L+ N +++ + + GA+++L L+HS I Sbjct: 658 NCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIA 717 Query: 569 ENAVTA 586 + A Sbjct: 718 MGSAAA 723
>SPAG6_MOUSE (Q9JLI7) Sperm-associated antigen 6 (PF16 protein homolog) (Axoneme| central apparatus protein) Length = 507 Score = 30.0 bits (66), Expect = 5.2 Identities = 17/62 (27%), Positives = 32/62 (51%) Frame = +2 Query: 401 KLIDDLKSDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQENAV 580 +L+ L + +++A +R + KH+ + I +CGA++ LV L D ++E A Sbjct: 87 QLVYSLAEQNRFYKKAAAFVLRAVGKHSPQLAQAIVDCGALDTLVICLEDFDPGVKEAAA 146 Query: 581 TA 586 A Sbjct: 147 WA 148 Score = 29.6 bits (65), Expect = 6.7 Identities = 15/57 (26%), Positives = 31/57 (54%) Frame = +2 Query: 416 LKSDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQENAVTA 586 ++ I +R A S + ++KH+ E + + GAI L ++ + DAK++ ++A Sbjct: 176 IQEPEIALKRIAASALSDISKHSPELAQTVVDAGAIAHLAQMILNPDAKLKRQVLSA 232
>ICE_DROME (O01382) Caspase precursor (EC 3.4.22.-) (drICE) [Contains: Caspase| subunit p21; Caspase subunit p12] Length = 339 Score = 30.0 bits (66), Expect = 5.2 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Frame = +2 Query: 56 SNGDSQDHVGSSSVNGSLPNS-----GQLDGECDNDNGMVRVPGDRTNYSSDASGEVADG 220 +NG+S D VG N PN G + +G+ V G Y S A G++A+G Sbjct: 5 NNGESADQVGIRVGNPEQPNDHTDALGSVGSGGAGSSGL--VAGSSHPYGSGAIGQLANG 62 Query: 221 GPSVSSAPQRENV 259 S SS+ R+NV Sbjct: 63 YSSPSSS-YRKNV 74
>SPAG6_HUMAN (O75602) Sperm-associated antigen 6 (PF16 protein homolog) (Sperm| flagellar protein) (Repro-SA-1) Length = 509 Score = 30.0 bits (66), Expect = 5.2 Identities = 15/57 (26%), Positives = 31/57 (54%) Frame = +2 Query: 416 LKSDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQENAVTA 586 ++ I +R A S + +AKH+ E + + GA+ L ++ + DAK++ ++A Sbjct: 176 IQEPEIALKRIAASALSDIAKHSPELAQTVVDAGAVAHLAQMILNPDAKLKHQILSA 232 Score = 30.0 bits (66), Expect = 5.2 Identities = 17/62 (27%), Positives = 32/62 (51%) Frame = +2 Query: 401 KLIDDLKSDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQENAV 580 +L+ L + +++A +R + KH+ + I +CGA++ LV L D ++E A Sbjct: 87 QLVYSLAEQNRFYKKAAAFVLRAVGKHSPQLAQAIVDCGALDTLVICLEDFDPGVKEAAA 146 Query: 581 TA 586 A Sbjct: 147 WA 148
>FHL1_YEAST (P39521) Pre-rRNA-processing protein FHL1| Length = 936 Score = 29.6 bits (65), Expect = 6.7 Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 4/139 (2%) Frame = +2 Query: 59 NGDSQDHVGSSSVNGSLPNSGQLDGECDNDNGMVRVPGDRTNYSSDASGEVADGGPSVSS 238 + D + G+SS + S SG + + +D+G GD ++ SS++ E +D G V Sbjct: 809 DNDLESESGTSSSSSSSSESGS-ESDSGSDDGSASGSGDNSSTSSESESE-SDSGSEVDE 866 Query: 239 APQRENVMLPRLGDVRMRGQFVRRQPSDRGFPRILSSSSMD----ARGDLSAIENQVRKL 406 + ++ + ++ S P +SS D ++ D +++ RK+ Sbjct: 867 KNNKNE---------KIDSESIKNNESKDDIPSKDENSSNDNREISKTDEEGHDSKRRKV 917 Query: 407 IDDLKSDSIEAQRSATSEI 463 +D+ E S ++ Sbjct: 918 SEDINEGITEVNVSLEEKL 936
>SYA_SHEON (Q8EBS1) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 874 Score = 29.6 bits (65), Expect = 6.7 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Frame = +2 Query: 335 RILSSSSMDARGDLSAIENQVRKLIDDLKSDSIEAQRSATSEIRLLAKHNMENRIVI--- 505 ++ +++S D GD + + N V LI L+ A R E+ K +++ I++ Sbjct: 750 KLAAAASADLAGD-AVVVNGVNVLIKKLEGVEAGALRGLQDEL----KQKLKSAIIVLGV 804 Query: 506 ANCGAINLLVGLLHSSDAKIQENAVTA 586 A G +NL+ G+ + AKI+ + A Sbjct: 805 AQEGKVNLIAGVSNDLIAKIKAGELVA 831
>CET1_ASHGO (Q755F7) mRNA capping enzyme beta subunit (EC 3.1.3.33)| (Polynucleotide 5'-triphosphatase) (mRNA 5'-triphosphatase) (TPase) Length = 478 Score = 29.6 bits (65), Expect = 6.7 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +2 Query: 122 QLDGECDNDNGMVRVPGDRTNYSSDASGEVADGGPSVSSA 241 Q+D E D D+G+ V DR ++ D G GG + A Sbjct: 61 QVDDETDTDDGLGEVAFDRADFRFDFEGHQRSGGRASGEA 100
>THIC_CORGL (Q8NQW7) Thiamine biosynthesis protein thiC| Length = 587 Score = 29.6 bits (65), Expect = 6.7 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +2 Query: 323 RGFPRILSSSSMDARGDLSAIENQVRKLIDDLKSDSIEAQRSA 451 +G PR L S + ARGD++ + + R LIDD +S Q SA Sbjct: 56 QGLPR-LRESWITARGDVATYQGRERLLIDDGRSAMRRGQASA 97
>APC_XENLA (P70039) Adenomatous polyposis coli homolog (Protein APC)| Length = 2829 Score = 29.6 bits (65), Expect = 6.7 Identities = 17/66 (25%), Positives = 34/66 (51%) Frame = +2 Query: 389 NQVRKLIDDLKSDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQ 568 N ++ L+ LKS S+ +A + L+ N +++ + + GA+++L L+HS I Sbjct: 662 NCLQTLLQHLKSHSLTIVSNACGTLWNLSARNAKDQEGLWDMGAVSMLKNLIHSKHKMIA 721 Query: 569 ENAVTA 586 + A Sbjct: 722 MGSAAA 727
>KIF25_HUMAN (Q9UIL4) Kinesin-like protein KIF25 (Kinesin-like protein 3)| Length = 384 Score = 29.3 bits (64), Expect = 8.8 Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 2/117 (1%) Frame = +2 Query: 203 GEVADGGPSVSSAPQRENVMLPRLGDVRMRGQFVRRQPSDRGFPRILSSSSMDARGDLSA 382 G +D GP + PQ + ++PR+ ++ F IL ++S + ++S Sbjct: 77 GRHSDDGPVLPLDPQSDLGIIPRV--------------AEELFRLILENTSRSPKVEVSI 122 Query: 383 IENQVRKLIDDLKSDSIEAQRSATSEIRLLAKHNMENRIVIAN--CGAINLLVGLLH 547 +E + D L DSI A E+ + AK ++A+ G+ + L+ L+H Sbjct: 123 VEVYNNDIFDLLAKDSIAAVSGVKREV-VTAKDGRTEVALLASEAVGSASKLMELVH 178
>IMA1_SCHPO (O14063) Importin alpha subunit (Karyopherin alpha subunit)| (Serine-rich RNA polymerase I suppressor protein) (Cell untimely torn protein 15) Length = 542 Score = 29.3 bits (64), Expect = 8.8 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = +2 Query: 398 RKLIDDLKSDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQENA 577 R+L++ L S + Q A + + + VI NCGA++ L+ LL S +++ A Sbjct: 293 RRLVELLMHPSAQVQTPALRSVGNIVTGDDVQTQVIINCGALSALLSLLSSPRDGVRKEA 352
>DDX5_MOUSE (Q61656) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) (DEAD box RNA helicase DEAD1) (mDEAD1) Length = 614 Score = 29.3 bits (64), Expect = 8.8 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = +2 Query: 386 ENQVRKLIDDLKSDSIEAQRSAT--SEIRLLAKHNMENRIVIANCGAINL 529 E Q+RK++D ++ D SAT E+R LA+ +++ I I N GA+ L Sbjct: 259 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI-NIGALEL 307
>DDX5_HUMAN (P17844) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) Length = 614 Score = 29.3 bits (64), Expect = 8.8 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = +2 Query: 386 ENQVRKLIDDLKSDSIEAQRSAT--SEIRLLAKHNMENRIVIANCGAINL 529 E Q+RK++D ++ D SAT E+R LA+ +++ I I N GA+ L Sbjct: 259 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI-NIGALEL 307
>FLGF_BUCBP (Q89AH8) Flagellar basal-body rod protein flgF| Length = 248 Score = 29.3 bits (64), Expect = 8.8 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +2 Query: 416 LKSDSIEAQRSATSEIRLLAKHNMENRIVIANCGAINLLVGLLHSSDAKIQENAV 580 LK+ I T+ + LL K+N N N I L+ G+L S+ ++EN V Sbjct: 160 LKNFDINDLTYKTNGLYLLNKNNKLNHTNHKNVSNIKLVSGILEDSNVNLEENMV 214 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,600,783 Number of Sequences: 219361 Number of extensions: 1852545 Number of successful extensions: 5274 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5077 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5268 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
