| Clone Name | bags22i06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479734.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2952 Score = 301 bits (152), Expect = 1e-78 Identities = 348/412 (84%), Gaps = 6/412 (1%) Strand = Plus / Plus Query: 176 aggacaaattacagtagtgatgcatctggagaagttgctgacggtgggccttctgtctct 235 |||||||||||||||||||||||||||||||||||| | || ||||||||| | ||| Sbjct: 1524 aggacaaattacagtagtgatgcatctggagaagttacaga---tgggccttcagcatct 1580 Query: 236 tctgcccctcaaagggaaaatgtaatgctgccaagattgggtgatgtccgcatgagaggg 295 ||||| ||||| ||||| || |||| | | ||||||| |||||| || | ||||| Sbjct: 1581 tctgctcctcagagggagcatctaatcccttctagattggctgatgttcgtagtagaggc 1640 Query: 296 caatttgttcggcggcaaccatctgacaggggattccctagaatactatcttcctcgtcc 355 |||||||||||||| ||||||||| ||||| ||||| |||||| |||||||||| ||| Sbjct: 1641 caatttgttcggcg---accatctgaaaggggtttccccagaataatatcttcctcatcc 1697 Query: 356 atggatgcccggggtgatctttctgccatcgagaatcaggtacgcaagctaatcgatgat 415 |||||| | ||| |||||||||| ||||||||||||||||| |||||| || | |||||| Sbjct: 1698 atggatacacggagtgatctttccgccatcgagaatcaggtccgcaagttagttgatgat 1757 Query: 416 ttgaaaagcgattccatagaagctcagagatcagcaacatcagagatccgccttctagct 475 || | ||| ||||| |||| | ||| |||||||| |||||||| ||||||||| ||||| Sbjct: 1758 ttaagaagtgattctgtagatgttcaaagatcagcgacatcagatatccgccttttagct 1817 Query: 476 aagcacaacatggagaacaggattgtcattgcaaattgtggggctataaacttgctggtt 535 ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| Sbjct: 1818 aagcacaacatggagaacaggatcatcattgcaaactgtggagctataaacttgctggtt 1877 Query: 536 ggtctccttcattcatcagatgccaaaatccaagaaaatgcagtgactgccc 587 ||||| |||||||| ||||| |||||| |||||| |||| ||||| |||| Sbjct: 1878 ggtcttcttcattcgccagattccaaaacccaagagcatgccgtgacagccc 1929 Score = 52.0 bits (26), Expect = 0.002 Identities = 93/114 (81%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 31 gaggaagcatttcaagncatctctttcgaacggtgactcacaggaccatgtaggaagctc 90 |||||||||||||||| ||||| || | || | || ||||| |||||||| || || || Sbjct: 1398 gaggaagcatttcaag-catctaatttggacagggattcacatgaccatgtgggtagttc 1456 Query: 91 ttctgttaatgggagtcttcctaatagcggtcagcttgacggggaatgtgacaa 144 ||| || ||||| || ||||| ||||||||||| ||||| | ||||||||||| Sbjct: 1457 ttcggtgaatggtagccttccaaatagcggtcaacttgatgcagaatgtgacaa 1510
>ref|XM_507093.1| PREDICTED Oryza sativa (japonica cultivar-group), P0007D08.34 mRNA Length = 2953 Score = 301 bits (152), Expect = 1e-78 Identities = 348/412 (84%), Gaps = 6/412 (1%) Strand = Plus / Plus Query: 176 aggacaaattacagtagtgatgcatctggagaagttgctgacggtgggccttctgtctct 235 |||||||||||||||||||||||||||||||||||| | || ||||||||| | ||| Sbjct: 1525 aggacaaattacagtagtgatgcatctggagaagttacaga---tgggccttcagcatct 1581 Query: 236 tctgcccctcaaagggaaaatgtaatgctgccaagattgggtgatgtccgcatgagaggg 295 ||||| ||||| ||||| || |||| | | ||||||| |||||| || | ||||| Sbjct: 1582 tctgctcctcagagggagcatctaatcccttctagattggctgatgttcgtagtagaggc 1641 Query: 296 caatttgttcggcggcaaccatctgacaggggattccctagaatactatcttcctcgtcc 355 |||||||||||||| ||||||||| ||||| ||||| |||||| |||||||||| ||| Sbjct: 1642 caatttgttcggcg---accatctgaaaggggtttccccagaataatatcttcctcatcc 1698 Query: 356 atggatgcccggggtgatctttctgccatcgagaatcaggtacgcaagctaatcgatgat 415 |||||| | ||| |||||||||| ||||||||||||||||| |||||| || | |||||| Sbjct: 1699 atggatacacggagtgatctttccgccatcgagaatcaggtccgcaagttagttgatgat 1758 Query: 416 ttgaaaagcgattccatagaagctcagagatcagcaacatcagagatccgccttctagct 475 || | ||| ||||| |||| | ||| |||||||| |||||||| ||||||||| ||||| Sbjct: 1759 ttaagaagtgattctgtagatgttcaaagatcagcgacatcagatatccgccttttagct 1818 Query: 476 aagcacaacatggagaacaggattgtcattgcaaattgtggggctataaacttgctggtt 535 ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| Sbjct: 1819 aagcacaacatggagaacaggatcatcattgcaaactgtggagctataaacttgctggtt 1878 Query: 536 ggtctccttcattcatcagatgccaaaatccaagaaaatgcagtgactgccc 587 ||||| |||||||| ||||| |||||| |||||| |||| ||||| |||| Sbjct: 1879 ggtcttcttcattcgccagattccaaaacccaagagcatgccgtgacagccc 1930 Score = 52.0 bits (26), Expect = 0.002 Identities = 93/114 (81%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 31 gaggaagcatttcaagncatctctttcgaacggtgactcacaggaccatgtaggaagctc 90 |||||||||||||||| ||||| || | || | || ||||| |||||||| || || || Sbjct: 1399 gaggaagcatttcaag-catctaatttggacagggattcacatgaccatgtgggtagttc 1457 Query: 91 ttctgttaatgggagtcttcctaatagcggtcagcttgacggggaatgtgacaa 144 ||| || ||||| || ||||| ||||||||||| ||||| | ||||||||||| Sbjct: 1458 ttcggtgaatggtagccttccaaatagcggtcaacttgatgcagaatgtgacaa 1511
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 301 bits (152), Expect = 1e-78 Identities = 348/412 (84%), Gaps = 6/412 (1%) Strand = Plus / Plus Query: 176 aggacaaattacagtagtgatgcatctggagaagttgctgacggtgggccttctgtctct 235 |||||||||||||||||||||||||||||||||||| | || ||||||||| | ||| Sbjct: 549025 aggacaaattacagtagtgatgcatctggagaagttacaga---tgggccttcagcatct 549081 Query: 236 tctgcccctcaaagggaaaatgtaatgctgccaagattgggtgatgtccgcatgagaggg 295 ||||| ||||| ||||| || |||| | | ||||||| |||||| || | ||||| Sbjct: 549082 tctgctcctcagagggagcatctaatcccttctagattggctgatgttcgtagtagaggc 549141 Query: 296 caatttgttcggcggcaaccatctgacaggggattccctagaatactatcttcctcgtcc 355 |||||||||||||| ||||||||| ||||| ||||| |||||| |||||||||| ||| Sbjct: 549142 caatttgttcggcg---accatctgaaaggggtttccccagaataatatcttcctcatcc 549198 Query: 356 atggatgcccggggtgatctttctgccatcgagaatcaggtacgcaagctaatcgatgat 415 |||||| | ||| |||||||||| ||||||||||||||||| |||||| || | |||||| Sbjct: 549199 atggatacacggagtgatctttccgccatcgagaatcaggtccgcaagttagttgatgat 549258 Query: 416 ttgaaaagcgattccatagaagctcagagatcagcaacatcagagatccgccttctagct 475 || | ||| ||||| |||| | ||| |||||||| |||||||| ||||||||| ||||| Sbjct: 549259 ttaagaagtgattctgtagatgttcaaagatcagcgacatcagatatccgccttttagct 549318 Query: 476 aagcacaacatggagaacaggattgtcattgcaaattgtggggctataaacttgctggtt 535 ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| Sbjct: 549319 aagcacaacatggagaacaggatcatcattgcaaactgtggagctataaacttgctggtt 549378 Query: 536 ggtctccttcattcatcagatgccaaaatccaagaaaatgcagtgactgccc 587 ||||| |||||||| ||||| |||||| |||||| |||| ||||| |||| Sbjct: 549379 ggtcttcttcattcgccagattccaaaacccaagagcatgccgtgacagccc 549430 Score = 52.0 bits (26), Expect = 0.002 Identities = 93/114 (81%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 31 gaggaagcatttcaagncatctctttcgaacggtgactcacaggaccatgtaggaagctc 90 |||||||||||||||| ||||| || | || | || ||||| |||||||| || || || Sbjct: 548899 gaggaagcatttcaag-catctaatttggacagggattcacatgaccatgtgggtagttc 548957 Query: 91 ttctgttaatgggagtcttcctaatagcggtcagcttgacggggaatgtgacaa 144 ||| || ||||| || ||||| ||||||||||| ||||| | ||||||||||| Sbjct: 548958 ttcggtgaatggtagccttccaaatagcggtcaacttgatgcagaatgtgacaa 549011
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0007D08 Length = 183142 Score = 301 bits (152), Expect = 1e-78 Identities = 348/412 (84%), Gaps = 6/412 (1%) Strand = Plus / Plus Query: 176 aggacaaattacagtagtgatgcatctggagaagttgctgacggtgggccttctgtctct 235 |||||||||||||||||||||||||||||||||||| | || ||||||||| | ||| Sbjct: 138985 aggacaaattacagtagtgatgcatctggagaagttacaga---tgggccttcagcatct 139041 Query: 236 tctgcccctcaaagggaaaatgtaatgctgccaagattgggtgatgtccgcatgagaggg 295 ||||| ||||| ||||| || |||| | | ||||||| |||||| || | ||||| Sbjct: 139042 tctgctcctcagagggagcatctaatcccttctagattggctgatgttcgtagtagaggc 139101 Query: 296 caatttgttcggcggcaaccatctgacaggggattccctagaatactatcttcctcgtcc 355 |||||||||||||| ||||||||| ||||| ||||| |||||| |||||||||| ||| Sbjct: 139102 caatttgttcggcg---accatctgaaaggggtttccccagaataatatcttcctcatcc 139158 Query: 356 atggatgcccggggtgatctttctgccatcgagaatcaggtacgcaagctaatcgatgat 415 |||||| | ||| |||||||||| ||||||||||||||||| |||||| || | |||||| Sbjct: 139159 atggatacacggagtgatctttccgccatcgagaatcaggtccgcaagttagttgatgat 139218 Query: 416 ttgaaaagcgattccatagaagctcagagatcagcaacatcagagatccgccttctagct 475 || | ||| ||||| |||| | ||| |||||||| |||||||| ||||||||| ||||| Sbjct: 139219 ttaagaagtgattctgtagatgttcaaagatcagcgacatcagatatccgccttttagct 139278 Query: 476 aagcacaacatggagaacaggattgtcattgcaaattgtggggctataaacttgctggtt 535 ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| Sbjct: 139279 aagcacaacatggagaacaggatcatcattgcaaactgtggagctataaacttgctggtt 139338 Query: 536 ggtctccttcattcatcagatgccaaaatccaagaaaatgcagtgactgccc 587 ||||| |||||||| ||||| |||||| |||||| |||| ||||| |||| Sbjct: 139339 ggtcttcttcattcgccagattccaaaacccaagagcatgccgtgacagccc 139390 Score = 52.0 bits (26), Expect = 0.002 Identities = 93/114 (81%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 31 gaggaagcatttcaagncatctctttcgaacggtgactcacaggaccatgtaggaagctc 90 |||||||||||||||| ||||| || | || | || ||||| |||||||| || || || Sbjct: 138859 gaggaagcatttcaag-catctaatttggacagggattcacatgaccatgtgggtagttc 138917 Query: 91 ttctgttaatgggagtcttcctaatagcggtcagcttgacggggaatgtgacaa 144 ||| || ||||| || ||||| ||||||||||| ||||| | ||||||||||| Sbjct: 138918 ttcggtgaatggtagccttccaaatagcggtcaacttgatgcagaatgtgacaa 138971
>dbj|AK106557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-109-A01, full insert sequence Length = 2952 Score = 301 bits (152), Expect = 1e-78 Identities = 348/412 (84%), Gaps = 6/412 (1%) Strand = Plus / Plus Query: 176 aggacaaattacagtagtgatgcatctggagaagttgctgacggtgggccttctgtctct 235 |||||||||||||||||||||||||||||||||||| | || ||||||||| | ||| Sbjct: 1524 aggacaaattacagtagtgatgcatctggagaagttacaga---tgggccttcagcatct 1580 Query: 236 tctgcccctcaaagggaaaatgtaatgctgccaagattgggtgatgtccgcatgagaggg 295 ||||| ||||| ||||| || |||| | | ||||||| |||||| || | ||||| Sbjct: 1581 tctgctcctcagagggagcatctaatcccttctagattggctgatgttcgtagtagaggc 1640 Query: 296 caatttgttcggcggcaaccatctgacaggggattccctagaatactatcttcctcgtcc 355 |||||||||||||| ||||||||| ||||| ||||| |||||| |||||||||| ||| Sbjct: 1641 caatttgttcggcg---accatctgaaaggggtttccccagaataatatcttcctcatcc 1697 Query: 356 atggatgcccggggtgatctttctgccatcgagaatcaggtacgcaagctaatcgatgat 415 |||||| | ||| |||||||||| ||||||||||||||||| |||||| || | |||||| Sbjct: 1698 atggatacacggagtgatctttccgccatcgagaatcaggtccgcaagttagttgatgat 1757 Query: 416 ttgaaaagcgattccatagaagctcagagatcagcaacatcagagatccgccttctagct 475 || | ||| ||||| |||| | ||| |||||||| |||||||| ||||||||| ||||| Sbjct: 1758 ttaagaagtgattctgtagatgttcaaagatcagcgacatcagatatccgccttttagct 1817 Query: 476 aagcacaacatggagaacaggattgtcattgcaaattgtggggctataaacttgctggtt 535 ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| Sbjct: 1818 aagcacaacatggagaacaggatcatcattgcaaactgtggagctataaacttgctggtt 1877 Query: 536 ggtctccttcattcatcagatgccaaaatccaagaaaatgcagtgactgccc 587 ||||| |||||||| ||||| |||||| |||||| |||| ||||| |||| Sbjct: 1878 ggtcttcttcattcgccagattccaaaacccaagagcatgccgtgacagccc 1929 Score = 52.0 bits (26), Expect = 0.002 Identities = 93/114 (81%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 31 gaggaagcatttcaagncatctctttcgaacggtgactcacaggaccatgtaggaagctc 90 |||||||||||||||| ||||| || | || | || ||||| |||||||| || || || Sbjct: 1398 gaggaagcatttcaag-catctaatttggacagggattcacatgaccatgtgggtagttc 1456 Query: 91 ttctgttaatgggagtcttcctaatagcggtcagcttgacggggaatgtgacaa 144 ||| || ||||| || ||||| ||||||||||| ||||| | ||||||||||| Sbjct: 1457 ttcggtgaatggtagccttccaaatagcggtcaacttgatgcagaatgtgacaa 1510
>dbj|AK102080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082K05, full insert sequence Length = 2953 Score = 301 bits (152), Expect = 1e-78 Identities = 348/412 (84%), Gaps = 6/412 (1%) Strand = Plus / Plus Query: 176 aggacaaattacagtagtgatgcatctggagaagttgctgacggtgggccttctgtctct 235 |||||||||||||||||||||||||||||||||||| | || ||||||||| | ||| Sbjct: 1525 aggacaaattacagtagtgatgcatctggagaagttacaga---tgggccttcagcatct 1581 Query: 236 tctgcccctcaaagggaaaatgtaatgctgccaagattgggtgatgtccgcatgagaggg 295 ||||| ||||| ||||| || |||| | | ||||||| |||||| || | ||||| Sbjct: 1582 tctgctcctcagagggagcatctaatcccttctagattggctgatgttcgtagtagaggc 1641 Query: 296 caatttgttcggcggcaaccatctgacaggggattccctagaatactatcttcctcgtcc 355 |||||||||||||| ||||||||| ||||| ||||| |||||| |||||||||| ||| Sbjct: 1642 caatttgttcggcg---accatctgaaaggggtttccccagaataatatcttcctcatcc 1698 Query: 356 atggatgcccggggtgatctttctgccatcgagaatcaggtacgcaagctaatcgatgat 415 |||||| | ||| |||||||||| ||||||||||||||||| |||||| || | |||||| Sbjct: 1699 atggatacacggagtgatctttccgccatcgagaatcaggtccgcaagttagttgatgat 1758 Query: 416 ttgaaaagcgattccatagaagctcagagatcagcaacatcagagatccgccttctagct 475 || | ||| ||||| |||| | ||| |||||||| |||||||| ||||||||| ||||| Sbjct: 1759 ttaagaagtgattctgtagatgttcaaagatcagcgacatcagatatccgccttttagct 1818 Query: 476 aagcacaacatggagaacaggattgtcattgcaaattgtggggctataaacttgctggtt 535 ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| Sbjct: 1819 aagcacaacatggagaacaggatcatcattgcaaactgtggagctataaacttgctggtt 1878 Query: 536 ggtctccttcattcatcagatgccaaaatccaagaaaatgcagtgactgccc 587 ||||| |||||||| ||||| |||||| |||||| |||| ||||| |||| Sbjct: 1879 ggtcttcttcattcgccagattccaaaacccaagagcatgccgtgacagccc 1930 Score = 52.0 bits (26), Expect = 0.002 Identities = 93/114 (81%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 31 gaggaagcatttcaagncatctctttcgaacggtgactcacaggaccatgtaggaagctc 90 |||||||||||||||| ||||| || | || | || ||||| |||||||| || || || Sbjct: 1399 gaggaagcatttcaag-catctaatttggacagggattcacatgaccatgtgggtagttc 1457 Query: 91 ttctgttaatgggagtcttcctaatagcggtcagcttgacggggaatgtgacaa 144 ||| || ||||| || ||||| ||||||||||| ||||| | ||||||||||| Sbjct: 1458 ttcggtgaatggtagccttccaaatagcggtcaacttgatgcagaatgtgacaa 1511
>gb|AC006976.2| Homo sapiens PAC clone RP5-1047E14 from 7, complete sequence Length = 121492 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 503 attgcaaattgtggggctataaacttgct 531 |||||||||||||||||||||||| |||| Sbjct: 30823 attgcaaattgtggggctataaacatgct 30851
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 acgagttccaggtgataggac 180 ||||||||||||||||||||| Sbjct: 354239 acgagttccaggtgataggac 354219
>ref|XM_571804.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 2669 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 acgagttccaggtgataggac 180 ||||||||||||||||||||| Sbjct: 1992 acgagttccaggtgataggac 2012
>gb|AC090885.1|AC090885 Homo sapiens chromosome 3 clone RP11-270I6 map 3p, complete sequence Length = 193264 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 ttcattcatcagatgccaaaa 563 ||||||||||||||||||||| Sbjct: 139518 ttcattcatcagatgccaaaa 139498
>gb|AC066589.3|AC066589 Homo sapiens chromosome 3 clone RP11-309M10 map 3p, complete sequence Length = 182171 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 ttcattcatcagatgccaaaa 563 ||||||||||||||||||||| Sbjct: 113297 ttcattcatcagatgccaaaa 113317
>gb|L22866.1|CPCDPOX Cryptococcus neoformans diphenol oxidase gene fragment Length = 4889 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 acgagttccaggtgataggac 180 ||||||||||||||||||||| Sbjct: 3941 acgagttccaggtgataggac 3961
>gb|AC069246.6| Homo sapiens chromosome 3 clone RP11-221A8 map 3p, complete sequence Length = 175121 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 ttcattcatcagatgccaaaa 563 ||||||||||||||||||||| Sbjct: 59200 ttcattcatcagatgccaaaa 59220
>gb|AC132107.3| Mus musculus BAC clone RP24-251C17 from chromosome 8, complete sequence Length = 141785 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 atgtaggaagctcttctgtt 97 |||||||||||||||||||| Sbjct: 109011 atgtaggaagctcttctgtt 109030
>emb|CT025546.10| Zebrafish DNA sequence from clone DKEY-105J11 in linkage group 18, complete sequence Length = 210488 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 catgagagggcaatttgttc 305 |||||||||||||||||||| Sbjct: 70187 catgagagggcaatttgttc 70206
>gb|AC073203.9| Homo sapiens BAC clone RP11-313M4 from 7, complete sequence Length = 150227 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 503 attgcaaattgtggggctataaacttgc 530 ||||||||||||| ||||||||||||| Sbjct: 73617 attgcaaattgtgctgctataaacttgc 73590
>gb|AC084793.5| Homo sapiens BAC clone CTD-2651D18 from 7, complete sequence Length = 46289 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 attgcaaattgtggggctataaac 526 |||||||||||||| ||||||||| Sbjct: 20522 attgcaaattgtggtgctataaac 20499
>emb|AL358134.11| Human DNA sequence from clone RP11-306O13 on chromosome 6, complete sequence Length = 144828 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 cagatgccaaaatccaagaa 571 |||||||||||||||||||| Sbjct: 141559 cagatgccaaaatccaagaa 141578
>emb|AL354815.10| Human DNA sequence from clone RP11-760M1 on chromosome 13 Contains three novel genes, the 5' end of the TNFRSF19 gene for tumour necrosis factor receptor superfamily member 19 and two CpG islands, complete sequence Length = 168663 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 aacaggattgtcattgcaaa 510 |||||||||||||||||||| Sbjct: 16098 aacaggattgtcattgcaaa 16117
>emb|AL031736.16|HS738P11 Human DNA sequence from clone RP4-738P11 on chromosome 1q24.1-24.3 Contains the XCL2 gene for chemokine (C motif) ligand 2, the XCL1 gene for chemokine (C motif) ligand 1 and two ribosomal protein L7a (RPL7A) pseudogenes, complete sequence Length = 147419 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 agagatcagcaacatcagag 460 |||||||||||||||||||| Sbjct: 111504 agagatcagcaacatcagag 111523
>emb|AL022150.2|HS198G23 Human DNA sequence from clone RP1-198G23 on chromosome Xq21.1-21.33 Contains a nonhistone chromosomal protein (HMG-14) pseudogene and a ubiquitin-conjugating enzyme E2 (UBE2V1) pseudogene, complete sequence Length = 94886 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 503 attgcaaattgtggggctataaacttgc 530 |||| ||||||||| ||||||||||||| Sbjct: 34979 attgtaaattgtggtgctataaacttgc 34952
>emb|BX842570.11| Human DNA sequence from clone RP11-23N11 on chromosome X, complete sequence Length = 47155 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ctcaaagggaaaatgtaatg 262 |||||||||||||||||||| Sbjct: 4907 ctcaaagggaaaatgtaatg 4926
>gb|AC012176.8| Homo sapiens chromosome 16 clone RP11-206F18, complete sequence Length = 162224 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 503 attgcaaattgtggggctataaacttgc 530 ||||||||||||| ||||||||||||| Sbjct: 56099 attgcaaattgtgttgctataaacttgc 56126
>gb|AC100768.2| Homo sapiens chromosome 11, clone RP11-945A11, complete sequence Length = 190183 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 503 attgcaaattgtggggctataaacttgc 530 ||||||||||||| ||||||||||||| Sbjct: 21986 attgcaaattgtgctgctataaacttgc 21959
>gb|AC100828.2| Homo sapiens chromosome 15, clone RP11-184D12, complete sequence Length = 175123 Score = 40.1 bits (20), Expect = 8.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 34 gaagcatttcaagncatctcttt 56 ||||||||||||| ||||||||| Sbjct: 16281 gaagcatttcaagtcatctcttt 16303
>gb|AC068867.9| Homo sapiens chromosome 15, clone RP11-702M1, complete sequence Length = 179455 Score = 40.1 bits (20), Expect = 8.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 34 gaagcatttcaagncatctcttt 56 ||||||||||||| ||||||||| Sbjct: 79407 gaagcatttcaagtcatctcttt 79429
>gb|AC090815.3| Homo sapiens chromosome 15, clone RP11-1078O1, complete sequence Length = 180352 Score = 40.1 bits (20), Expect = 8.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 34 gaagcatttcaagncatctcttt 56 ||||||||||||| ||||||||| Sbjct: 86175 gaagcatttcaagtcatctcttt 86153
>gb|AC068472.5|AC068472 Homo sapiens chromosome 11, clone RP11-713P14, complete sequence Length = 183659 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 503 attgcaaattgtggggctataaacttgc 530 ||||||||||||| ||||||||||||| Sbjct: 40881 attgcaaattgtgctgctataaacttgc 40908
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 cttgctggttggtctccttc 545 |||||||||||||||||||| Sbjct: 22554746 cttgctggttggtctccttc 22554765
>gb|AC012501.7| Homo sapiens BAC clone RP11-440F15 from 2, complete sequence Length = 214838 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 503 attgcaaattgtggggctataaacttgc 530 ||||||||||||| ||||||||||||| Sbjct: 142607 attgcaaattgtgctgctataaacttgc 142634
>gb|AC117984.2| Homo sapiens chromosome 16 clone CTD-2503H21, complete sequence Length = 190454 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 503 attgcaaattgtggggctataaacttgc 530 ||||||||||||| ||||||||||||| Sbjct: 118824 attgcaaattgtgttgctataaacttgc 118797
>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1331F11 Length = 132205 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 cttgctggttggtctccttc 545 |||||||||||||||||||| Sbjct: 69947 cttgctggttggtctccttc 69966
>gb|AC109256.11| Mus musculus chromosome 8, clone RP23-11D11, complete sequence Length = 242101 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 atgtaggaagctcttctgtt 97 |||||||||||||||||||| Sbjct: 178348 atgtaggaagctcttctgtt 178329
>dbj|AP001582.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-215H18, complete sequence Length = 90256 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 attgcaaattgtggggctataaac 526 ||||||||||||| |||||||||| Sbjct: 37617 attgcaaattgtgtggctataaac 37594
>emb|AL590443.1|CNS07EGA chromosome III of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 194439 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 aaagcgattccatagaagctcaga 443 ||||||||||||||||||| |||| Sbjct: 118494 aaagcgattccatagaagcccaga 118517
>gb|AC122391.4| Mus musculus BAC clone RP24-81C18 from 14, complete sequence Length = 184636 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 ttccctagaatactatcttc 348 |||||||||||||||||||| Sbjct: 92952 ttccctagaatactatcttc 92971
>dbj|AP003116.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1241F12 Length = 142424 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 attgcaaattgtggggctataaac 526 ||||||||||||| |||||||||| Sbjct: 26225 attgcaaattgtgtggctataaac 26202
>dbj|AP003113.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1747F8 Length = 161402 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 attgcaaattgtggggctataaac 526 ||||||||||||| |||||||||| Sbjct: 105716 attgcaaattgtgtggctataaac 105693 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,875,392 Number of Sequences: 3902068 Number of extensions: 4875392 Number of successful extensions: 100920 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100774 Number of HSP's gapped (non-prelim): 134 length of query: 587 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 564 effective length of database: 17,143,297,704 effective search space: 9668819905056 effective search space used: 9668819905056 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)