ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags22i06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_479734.1| Oryza sativa (japonica cultivar-group), mRNA 301 1e-78
2ref|XM_507093.1| PREDICTED Oryza sativa (japonica cultivar-group... 301 1e-78
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 301 1e-78
4dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic D... 301 1e-78
5dbj|AK106557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 1e-78
6dbj|AK102080.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 1e-78
7gb|AC006976.2| Homo sapiens PAC clone RP5-1047E14 from 7, comple... 50 0.008
8gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.0
9ref|XM_571804.1| Cryptococcus neoformans var. neoformans JEC21 c... 42 2.0
10gb|AC090885.1|AC090885 Homo sapiens chromosome 3 clone RP11-270I... 42 2.0
11gb|AC066589.3|AC066589 Homo sapiens chromosome 3 clone RP11-309M... 42 2.0
12gb|L22866.1|CPCDPOX Cryptococcus neoformans diphenol oxidase gen... 42 2.0
13gb|AC069246.6| Homo sapiens chromosome 3 clone RP11-221A8 map 3p... 42 2.0
14gb|AC132107.3| Mus musculus BAC clone RP24-251C17 from chromosom... 40 8.0
15emb|CT025546.10| Zebrafish DNA sequence from clone DKEY-105J11 i... 40 8.0
16gb|AC073203.9| Homo sapiens BAC clone RP11-313M4 from 7, complet... 40 8.0
17gb|AC084793.5| Homo sapiens BAC clone CTD-2651D18 from 7, comple... 40 8.0
18emb|AL358134.11| Human DNA sequence from clone RP11-306O13 on ch... 40 8.0
19emb|AL354815.10| Human DNA sequence from clone RP11-760M1 on chr... 40 8.0
20emb|AL031736.16|HS738P11 Human DNA sequence from clone RP4-738P1... 40 8.0
21emb|AL022150.2|HS198G23 Human DNA sequence from clone RP1-198G23... 40 8.0
22emb|BX842570.11| Human DNA sequence from clone RP11-23N11 on chr... 40 8.0
23gb|AC012176.8| Homo sapiens chromosome 16 clone RP11-206F18, com... 40 8.0
24gb|AC100768.2| Homo sapiens chromosome 11, clone RP11-945A11, co... 40 8.0
25gb|AC100828.2| Homo sapiens chromosome 15, clone RP11-184D12, co... 40 8.0
26gb|AC068867.9| Homo sapiens chromosome 15, clone RP11-702M1, com... 40 8.0
27gb|AC090815.3| Homo sapiens chromosome 15, clone RP11-1078O1, co... 40 8.0
28gb|AC068472.5|AC068472 Homo sapiens chromosome 11, clone RP11-71... 40 8.0
29dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
30gb|AC012501.7| Homo sapiens BAC clone RP11-440F15 from 2, comple... 40 8.0
31gb|AC117984.2| Homo sapiens chromosome 16 clone CTD-2503H21, com... 40 8.0
32dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
33gb|AC109256.11| Mus musculus chromosome 8, clone RP23-11D11, com... 40 8.0
34dbj|AP001582.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.0
35emb|AL590443.1|CNS07EGA chromosome III of strain GB-M1 of Enceph... 40 8.0
36gb|AC122391.4| Mus musculus BAC clone RP24-81C18 from 14, comple... 40 8.0
37dbj|AP003116.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.0
38dbj|AP003113.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.0

>ref|XM_479734.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2952

 Score =  301 bits (152), Expect = 1e-78
 Identities = 348/412 (84%), Gaps = 6/412 (1%)
 Strand = Plus / Plus

                                                                        
Query: 176  aggacaaattacagtagtgatgcatctggagaagttgctgacggtgggccttctgtctct 235
            |||||||||||||||||||||||||||||||||||| | ||   ||||||||| |  |||
Sbjct: 1524 aggacaaattacagtagtgatgcatctggagaagttacaga---tgggccttcagcatct 1580

                                                                        
Query: 236  tctgcccctcaaagggaaaatgtaatgctgccaagattgggtgatgtccgcatgagaggg 295
            ||||| ||||| |||||  || |||| |   | ||||||| |||||| || |  ||||| 
Sbjct: 1581 tctgctcctcagagggagcatctaatcccttctagattggctgatgttcgtagtagaggc 1640

                                                                        
Query: 296  caatttgttcggcggcaaccatctgacaggggattccctagaatactatcttcctcgtcc 355
            ||||||||||||||   ||||||||| ||||| ||||| |||||| |||||||||| |||
Sbjct: 1641 caatttgttcggcg---accatctgaaaggggtttccccagaataatatcttcctcatcc 1697

                                                                        
Query: 356  atggatgcccggggtgatctttctgccatcgagaatcaggtacgcaagctaatcgatgat 415
            |||||| | ||| |||||||||| ||||||||||||||||| |||||| || | ||||||
Sbjct: 1698 atggatacacggagtgatctttccgccatcgagaatcaggtccgcaagttagttgatgat 1757

                                                                        
Query: 416  ttgaaaagcgattccatagaagctcagagatcagcaacatcagagatccgccttctagct 475
            || | ||| |||||  |||| | ||| |||||||| |||||||| ||||||||| |||||
Sbjct: 1758 ttaagaagtgattctgtagatgttcaaagatcagcgacatcagatatccgccttttagct 1817

                                                                        
Query: 476  aagcacaacatggagaacaggattgtcattgcaaattgtggggctataaacttgctggtt 535
            |||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 1818 aagcacaacatggagaacaggatcatcattgcaaactgtggagctataaacttgctggtt 1877

                                                                
Query: 536  ggtctccttcattcatcagatgccaaaatccaagaaaatgcagtgactgccc 587
            ||||| ||||||||  ||||| |||||| ||||||  |||| ||||| ||||
Sbjct: 1878 ggtcttcttcattcgccagattccaaaacccaagagcatgccgtgacagccc 1929



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 93/114 (81%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                        
Query: 31   gaggaagcatttcaagncatctctttcgaacggtgactcacaggaccatgtaggaagctc 90
            |||||||||||||||| |||||  || | || | || ||||| |||||||| || || ||
Sbjct: 1398 gaggaagcatttcaag-catctaatttggacagggattcacatgaccatgtgggtagttc 1456

                                                                  
Query: 91   ttctgttaatgggagtcttcctaatagcggtcagcttgacggggaatgtgacaa 144
            ||| || ||||| || ||||| ||||||||||| ||||| |  |||||||||||
Sbjct: 1457 ttcggtgaatggtagccttccaaatagcggtcaacttgatgcagaatgtgacaa 1510



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>ref|XM_507093.1| PREDICTED Oryza sativa (japonica cultivar-group), P0007D08.34 mRNA
          Length = 2953

 Score =  301 bits (152), Expect = 1e-78
 Identities = 348/412 (84%), Gaps = 6/412 (1%)
 Strand = Plus / Plus

                                                                        
Query: 176  aggacaaattacagtagtgatgcatctggagaagttgctgacggtgggccttctgtctct 235
            |||||||||||||||||||||||||||||||||||| | ||   ||||||||| |  |||
Sbjct: 1525 aggacaaattacagtagtgatgcatctggagaagttacaga---tgggccttcagcatct 1581

                                                                        
Query: 236  tctgcccctcaaagggaaaatgtaatgctgccaagattgggtgatgtccgcatgagaggg 295
            ||||| ||||| |||||  || |||| |   | ||||||| |||||| || |  ||||| 
Sbjct: 1582 tctgctcctcagagggagcatctaatcccttctagattggctgatgttcgtagtagaggc 1641

                                                                        
Query: 296  caatttgttcggcggcaaccatctgacaggggattccctagaatactatcttcctcgtcc 355
            ||||||||||||||   ||||||||| ||||| ||||| |||||| |||||||||| |||
Sbjct: 1642 caatttgttcggcg---accatctgaaaggggtttccccagaataatatcttcctcatcc 1698

                                                                        
Query: 356  atggatgcccggggtgatctttctgccatcgagaatcaggtacgcaagctaatcgatgat 415
            |||||| | ||| |||||||||| ||||||||||||||||| |||||| || | ||||||
Sbjct: 1699 atggatacacggagtgatctttccgccatcgagaatcaggtccgcaagttagttgatgat 1758

                                                                        
Query: 416  ttgaaaagcgattccatagaagctcagagatcagcaacatcagagatccgccttctagct 475
            || | ||| |||||  |||| | ||| |||||||| |||||||| ||||||||| |||||
Sbjct: 1759 ttaagaagtgattctgtagatgttcaaagatcagcgacatcagatatccgccttttagct 1818

                                                                        
Query: 476  aagcacaacatggagaacaggattgtcattgcaaattgtggggctataaacttgctggtt 535
            |||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 1819 aagcacaacatggagaacaggatcatcattgcaaactgtggagctataaacttgctggtt 1878

                                                                
Query: 536  ggtctccttcattcatcagatgccaaaatccaagaaaatgcagtgactgccc 587
            ||||| ||||||||  ||||| |||||| ||||||  |||| ||||| ||||
Sbjct: 1879 ggtcttcttcattcgccagattccaaaacccaagagcatgccgtgacagccc 1930



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 93/114 (81%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                        
Query: 31   gaggaagcatttcaagncatctctttcgaacggtgactcacaggaccatgtaggaagctc 90
            |||||||||||||||| |||||  || | || | || ||||| |||||||| || || ||
Sbjct: 1399 gaggaagcatttcaag-catctaatttggacagggattcacatgaccatgtgggtagttc 1457

                                                                  
Query: 91   ttctgttaatgggagtcttcctaatagcggtcagcttgacggggaatgtgacaa 144
            ||| || ||||| || ||||| ||||||||||| ||||| |  |||||||||||
Sbjct: 1458 ttcggtgaatggtagccttccaaatagcggtcaacttgatgcagaatgtgacaa 1511



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  301 bits (152), Expect = 1e-78
 Identities = 348/412 (84%), Gaps = 6/412 (1%)
 Strand = Plus / Plus

                                                                          
Query: 176    aggacaaattacagtagtgatgcatctggagaagttgctgacggtgggccttctgtctct 235
              |||||||||||||||||||||||||||||||||||| | ||   ||||||||| |  |||
Sbjct: 549025 aggacaaattacagtagtgatgcatctggagaagttacaga---tgggccttcagcatct 549081

                                                                          
Query: 236    tctgcccctcaaagggaaaatgtaatgctgccaagattgggtgatgtccgcatgagaggg 295
              ||||| ||||| |||||  || |||| |   | ||||||| |||||| || |  ||||| 
Sbjct: 549082 tctgctcctcagagggagcatctaatcccttctagattggctgatgttcgtagtagaggc 549141

                                                                          
Query: 296    caatttgttcggcggcaaccatctgacaggggattccctagaatactatcttcctcgtcc 355
              ||||||||||||||   ||||||||| ||||| ||||| |||||| |||||||||| |||
Sbjct: 549142 caatttgttcggcg---accatctgaaaggggtttccccagaataatatcttcctcatcc 549198

                                                                          
Query: 356    atggatgcccggggtgatctttctgccatcgagaatcaggtacgcaagctaatcgatgat 415
              |||||| | ||| |||||||||| ||||||||||||||||| |||||| || | ||||||
Sbjct: 549199 atggatacacggagtgatctttccgccatcgagaatcaggtccgcaagttagttgatgat 549258

                                                                          
Query: 416    ttgaaaagcgattccatagaagctcagagatcagcaacatcagagatccgccttctagct 475
              || | ||| |||||  |||| | ||| |||||||| |||||||| ||||||||| |||||
Sbjct: 549259 ttaagaagtgattctgtagatgttcaaagatcagcgacatcagatatccgccttttagct 549318

                                                                          
Query: 476    aagcacaacatggagaacaggattgtcattgcaaattgtggggctataaacttgctggtt 535
              |||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 549319 aagcacaacatggagaacaggatcatcattgcaaactgtggagctataaacttgctggtt 549378

                                                                  
Query: 536    ggtctccttcattcatcagatgccaaaatccaagaaaatgcagtgactgccc 587
              ||||| ||||||||  ||||| |||||| ||||||  |||| ||||| ||||
Sbjct: 549379 ggtcttcttcattcgccagattccaaaacccaagagcatgccgtgacagccc 549430



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 93/114 (81%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                          
Query: 31     gaggaagcatttcaagncatctctttcgaacggtgactcacaggaccatgtaggaagctc 90
              |||||||||||||||| |||||  || | || | || ||||| |||||||| || || ||
Sbjct: 548899 gaggaagcatttcaag-catctaatttggacagggattcacatgaccatgtgggtagttc 548957

                                                                    
Query: 91     ttctgttaatgggagtcttcctaatagcggtcagcttgacggggaatgtgacaa 144
              ||| || ||||| || ||||| ||||||||||| ||||| |  |||||||||||
Sbjct: 548958 ttcggtgaatggtagccttccaaatagcggtcaacttgatgcagaatgtgacaa 549011



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>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0007D08
          Length = 183142

 Score =  301 bits (152), Expect = 1e-78
 Identities = 348/412 (84%), Gaps = 6/412 (1%)
 Strand = Plus / Plus

                                                                          
Query: 176    aggacaaattacagtagtgatgcatctggagaagttgctgacggtgggccttctgtctct 235
              |||||||||||||||||||||||||||||||||||| | ||   ||||||||| |  |||
Sbjct: 138985 aggacaaattacagtagtgatgcatctggagaagttacaga---tgggccttcagcatct 139041

                                                                          
Query: 236    tctgcccctcaaagggaaaatgtaatgctgccaagattgggtgatgtccgcatgagaggg 295
              ||||| ||||| |||||  || |||| |   | ||||||| |||||| || |  ||||| 
Sbjct: 139042 tctgctcctcagagggagcatctaatcccttctagattggctgatgttcgtagtagaggc 139101

                                                                          
Query: 296    caatttgttcggcggcaaccatctgacaggggattccctagaatactatcttcctcgtcc 355
              ||||||||||||||   ||||||||| ||||| ||||| |||||| |||||||||| |||
Sbjct: 139102 caatttgttcggcg---accatctgaaaggggtttccccagaataatatcttcctcatcc 139158

                                                                          
Query: 356    atggatgcccggggtgatctttctgccatcgagaatcaggtacgcaagctaatcgatgat 415
              |||||| | ||| |||||||||| ||||||||||||||||| |||||| || | ||||||
Sbjct: 139159 atggatacacggagtgatctttccgccatcgagaatcaggtccgcaagttagttgatgat 139218

                                                                          
Query: 416    ttgaaaagcgattccatagaagctcagagatcagcaacatcagagatccgccttctagct 475
              || | ||| |||||  |||| | ||| |||||||| |||||||| ||||||||| |||||
Sbjct: 139219 ttaagaagtgattctgtagatgttcaaagatcagcgacatcagatatccgccttttagct 139278

                                                                          
Query: 476    aagcacaacatggagaacaggattgtcattgcaaattgtggggctataaacttgctggtt 535
              |||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 139279 aagcacaacatggagaacaggatcatcattgcaaactgtggagctataaacttgctggtt 139338

                                                                  
Query: 536    ggtctccttcattcatcagatgccaaaatccaagaaaatgcagtgactgccc 587
              ||||| ||||||||  ||||| |||||| ||||||  |||| ||||| ||||
Sbjct: 139339 ggtcttcttcattcgccagattccaaaacccaagagcatgccgtgacagccc 139390



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 93/114 (81%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                          
Query: 31     gaggaagcatttcaagncatctctttcgaacggtgactcacaggaccatgtaggaagctc 90
              |||||||||||||||| |||||  || | || | || ||||| |||||||| || || ||
Sbjct: 138859 gaggaagcatttcaag-catctaatttggacagggattcacatgaccatgtgggtagttc 138917

                                                                    
Query: 91     ttctgttaatgggagtcttcctaatagcggtcagcttgacggggaatgtgacaa 144
              ||| || ||||| || ||||| ||||||||||| ||||| |  |||||||||||
Sbjct: 138918 ttcggtgaatggtagccttccaaatagcggtcaacttgatgcagaatgtgacaa 138971



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>dbj|AK106557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-109-A01, full
            insert sequence
          Length = 2952

 Score =  301 bits (152), Expect = 1e-78
 Identities = 348/412 (84%), Gaps = 6/412 (1%)
 Strand = Plus / Plus

                                                                        
Query: 176  aggacaaattacagtagtgatgcatctggagaagttgctgacggtgggccttctgtctct 235
            |||||||||||||||||||||||||||||||||||| | ||   ||||||||| |  |||
Sbjct: 1524 aggacaaattacagtagtgatgcatctggagaagttacaga---tgggccttcagcatct 1580

                                                                        
Query: 236  tctgcccctcaaagggaaaatgtaatgctgccaagattgggtgatgtccgcatgagaggg 295
            ||||| ||||| |||||  || |||| |   | ||||||| |||||| || |  ||||| 
Sbjct: 1581 tctgctcctcagagggagcatctaatcccttctagattggctgatgttcgtagtagaggc 1640

                                                                        
Query: 296  caatttgttcggcggcaaccatctgacaggggattccctagaatactatcttcctcgtcc 355
            ||||||||||||||   ||||||||| ||||| ||||| |||||| |||||||||| |||
Sbjct: 1641 caatttgttcggcg---accatctgaaaggggtttccccagaataatatcttcctcatcc 1697

                                                                        
Query: 356  atggatgcccggggtgatctttctgccatcgagaatcaggtacgcaagctaatcgatgat 415
            |||||| | ||| |||||||||| ||||||||||||||||| |||||| || | ||||||
Sbjct: 1698 atggatacacggagtgatctttccgccatcgagaatcaggtccgcaagttagttgatgat 1757

                                                                        
Query: 416  ttgaaaagcgattccatagaagctcagagatcagcaacatcagagatccgccttctagct 475
            || | ||| |||||  |||| | ||| |||||||| |||||||| ||||||||| |||||
Sbjct: 1758 ttaagaagtgattctgtagatgttcaaagatcagcgacatcagatatccgccttttagct 1817

                                                                        
Query: 476  aagcacaacatggagaacaggattgtcattgcaaattgtggggctataaacttgctggtt 535
            |||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 1818 aagcacaacatggagaacaggatcatcattgcaaactgtggagctataaacttgctggtt 1877

                                                                
Query: 536  ggtctccttcattcatcagatgccaaaatccaagaaaatgcagtgactgccc 587
            ||||| ||||||||  ||||| |||||| ||||||  |||| ||||| ||||
Sbjct: 1878 ggtcttcttcattcgccagattccaaaacccaagagcatgccgtgacagccc 1929



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 93/114 (81%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                        
Query: 31   gaggaagcatttcaagncatctctttcgaacggtgactcacaggaccatgtaggaagctc 90
            |||||||||||||||| |||||  || | || | || ||||| |||||||| || || ||
Sbjct: 1398 gaggaagcatttcaag-catctaatttggacagggattcacatgaccatgtgggtagttc 1456

                                                                  
Query: 91   ttctgttaatgggagtcttcctaatagcggtcagcttgacggggaatgtgacaa 144
            ||| || ||||| || ||||| ||||||||||| ||||| |  |||||||||||
Sbjct: 1457 ttcggtgaatggtagccttccaaatagcggtcaacttgatgcagaatgtgacaa 1510



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>dbj|AK102080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082K05, full
            insert sequence
          Length = 2953

 Score =  301 bits (152), Expect = 1e-78
 Identities = 348/412 (84%), Gaps = 6/412 (1%)
 Strand = Plus / Plus

                                                                        
Query: 176  aggacaaattacagtagtgatgcatctggagaagttgctgacggtgggccttctgtctct 235
            |||||||||||||||||||||||||||||||||||| | ||   ||||||||| |  |||
Sbjct: 1525 aggacaaattacagtagtgatgcatctggagaagttacaga---tgggccttcagcatct 1581

                                                                        
Query: 236  tctgcccctcaaagggaaaatgtaatgctgccaagattgggtgatgtccgcatgagaggg 295
            ||||| ||||| |||||  || |||| |   | ||||||| |||||| || |  ||||| 
Sbjct: 1582 tctgctcctcagagggagcatctaatcccttctagattggctgatgttcgtagtagaggc 1641

                                                                        
Query: 296  caatttgttcggcggcaaccatctgacaggggattccctagaatactatcttcctcgtcc 355
            ||||||||||||||   ||||||||| ||||| ||||| |||||| |||||||||| |||
Sbjct: 1642 caatttgttcggcg---accatctgaaaggggtttccccagaataatatcttcctcatcc 1698

                                                                        
Query: 356  atggatgcccggggtgatctttctgccatcgagaatcaggtacgcaagctaatcgatgat 415
            |||||| | ||| |||||||||| ||||||||||||||||| |||||| || | ||||||
Sbjct: 1699 atggatacacggagtgatctttccgccatcgagaatcaggtccgcaagttagttgatgat 1758

                                                                        
Query: 416  ttgaaaagcgattccatagaagctcagagatcagcaacatcagagatccgccttctagct 475
            || | ||| |||||  |||| | ||| |||||||| |||||||| ||||||||| |||||
Sbjct: 1759 ttaagaagtgattctgtagatgttcaaagatcagcgacatcagatatccgccttttagct 1818

                                                                        
Query: 476  aagcacaacatggagaacaggattgtcattgcaaattgtggggctataaacttgctggtt 535
            |||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 1819 aagcacaacatggagaacaggatcatcattgcaaactgtggagctataaacttgctggtt 1878

                                                                
Query: 536  ggtctccttcattcatcagatgccaaaatccaagaaaatgcagtgactgccc 587
            ||||| ||||||||  ||||| |||||| ||||||  |||| ||||| ||||
Sbjct: 1879 ggtcttcttcattcgccagattccaaaacccaagagcatgccgtgacagccc 1930



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 93/114 (81%), Gaps = 1/114 (0%)
 Strand = Plus / Plus

                                                                        
Query: 31   gaggaagcatttcaagncatctctttcgaacggtgactcacaggaccatgtaggaagctc 90
            |||||||||||||||| |||||  || | || | || ||||| |||||||| || || ||
Sbjct: 1399 gaggaagcatttcaag-catctaatttggacagggattcacatgaccatgtgggtagttc 1457

                                                                  
Query: 91   ttctgttaatgggagtcttcctaatagcggtcagcttgacggggaatgtgacaa 144
            ||| || ||||| || ||||| ||||||||||| ||||| |  |||||||||||
Sbjct: 1458 ttcggtgaatggtagccttccaaatagcggtcaacttgatgcagaatgtgacaa 1511



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>gb|AC006976.2| Homo sapiens PAC clone RP5-1047E14 from 7, complete sequence
          Length = 121492

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 503   attgcaaattgtggggctataaacttgct 531
             |||||||||||||||||||||||| ||||
Sbjct: 30823 attgcaaattgtggggctataaacatgct 30851



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>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
              sequence
          Length = 1347793

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 160    acgagttccaggtgataggac 180
              |||||||||||||||||||||
Sbjct: 354239 acgagttccaggtgataggac 354219



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>ref|XM_571804.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7
          Length = 2669

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 160  acgagttccaggtgataggac 180
            |||||||||||||||||||||
Sbjct: 1992 acgagttccaggtgataggac 2012



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>gb|AC090885.1|AC090885 Homo sapiens chromosome 3 clone RP11-270I6 map 3p, complete sequence
          Length = 193264

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 543    ttcattcatcagatgccaaaa 563
              |||||||||||||||||||||
Sbjct: 139518 ttcattcatcagatgccaaaa 139498



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>gb|AC066589.3|AC066589 Homo sapiens chromosome 3 clone RP11-309M10 map 3p, complete sequence
          Length = 182171

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 543    ttcattcatcagatgccaaaa 563
              |||||||||||||||||||||
Sbjct: 113297 ttcattcatcagatgccaaaa 113317



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>gb|L22866.1|CPCDPOX Cryptococcus neoformans diphenol oxidase gene fragment
          Length = 4889

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 160  acgagttccaggtgataggac 180
            |||||||||||||||||||||
Sbjct: 3941 acgagttccaggtgataggac 3961



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>gb|AC069246.6| Homo sapiens chromosome 3 clone RP11-221A8 map 3p, complete sequence
          Length = 175121

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 543   ttcattcatcagatgccaaaa 563
             |||||||||||||||||||||
Sbjct: 59200 ttcattcatcagatgccaaaa 59220



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>gb|AC132107.3| Mus musculus BAC clone RP24-251C17 from chromosome 8, complete sequence
          Length = 141785

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     atgtaggaagctcttctgtt 97
              ||||||||||||||||||||
Sbjct: 109011 atgtaggaagctcttctgtt 109030



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>emb|CT025546.10| Zebrafish DNA sequence from clone DKEY-105J11 in linkage group 18,
             complete sequence
          Length = 210488

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 286   catgagagggcaatttgttc 305
             ||||||||||||||||||||
Sbjct: 70187 catgagagggcaatttgttc 70206



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>gb|AC073203.9| Homo sapiens BAC clone RP11-313M4 from 7, complete sequence
          Length = 150227

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 503   attgcaaattgtggggctataaacttgc 530
             |||||||||||||  |||||||||||||
Sbjct: 73617 attgcaaattgtgctgctataaacttgc 73590



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>gb|AC084793.5| Homo sapiens BAC clone CTD-2651D18 from 7, complete sequence
          Length = 46289

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 503   attgcaaattgtggggctataaac 526
             |||||||||||||| |||||||||
Sbjct: 20522 attgcaaattgtggtgctataaac 20499



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>emb|AL358134.11| Human DNA sequence from clone RP11-306O13 on chromosome 6, complete
              sequence
          Length = 144828

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 552    cagatgccaaaatccaagaa 571
              ||||||||||||||||||||
Sbjct: 141559 cagatgccaaaatccaagaa 141578



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>emb|AL354815.10| Human DNA sequence from clone RP11-760M1 on chromosome 13 Contains
             three novel genes, the 5' end of the TNFRSF19 gene for
             tumour necrosis factor receptor superfamily member 19 and
             two CpG islands, complete sequence
          Length = 168663

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   aacaggattgtcattgcaaa 510
             ||||||||||||||||||||
Sbjct: 16098 aacaggattgtcattgcaaa 16117



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>emb|AL031736.16|HS738P11 Human DNA sequence from clone RP4-738P11 on chromosome 1q24.1-24.3
              Contains the XCL2 gene for chemokine (C motif) ligand 2,
              the XCL1 gene for chemokine (C motif) ligand 1 and two
              ribosomal protein L7a (RPL7A) pseudogenes, complete
              sequence
          Length = 147419

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 441    agagatcagcaacatcagag 460
              ||||||||||||||||||||
Sbjct: 111504 agagatcagcaacatcagag 111523



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>emb|AL022150.2|HS198G23 Human DNA sequence from clone RP1-198G23 on chromosome Xq21.1-21.33
             Contains a nonhistone chromosomal protein (HMG-14)
             pseudogene and a ubiquitin-conjugating enzyme E2 (UBE2V1)
             pseudogene, complete sequence
          Length = 94886

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 503   attgcaaattgtggggctataaacttgc 530
             |||| ||||||||| |||||||||||||
Sbjct: 34979 attgtaaattgtggtgctataaacttgc 34952



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>emb|BX842570.11| Human DNA sequence from clone RP11-23N11 on chromosome X, complete
            sequence
          Length = 47155

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 243  ctcaaagggaaaatgtaatg 262
            ||||||||||||||||||||
Sbjct: 4907 ctcaaagggaaaatgtaatg 4926



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>gb|AC012176.8| Homo sapiens chromosome 16 clone RP11-206F18, complete sequence
          Length = 162224

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 503   attgcaaattgtggggctataaacttgc 530
             |||||||||||||  |||||||||||||
Sbjct: 56099 attgcaaattgtgttgctataaacttgc 56126



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>gb|AC100768.2| Homo sapiens chromosome 11, clone RP11-945A11, complete sequence
          Length = 190183

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 503   attgcaaattgtggggctataaacttgc 530
             |||||||||||||  |||||||||||||
Sbjct: 21986 attgcaaattgtgctgctataaacttgc 21959



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>gb|AC100828.2| Homo sapiens chromosome 15, clone RP11-184D12, complete sequence
          Length = 175123

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 34    gaagcatttcaagncatctcttt 56
             ||||||||||||| |||||||||
Sbjct: 16281 gaagcatttcaagtcatctcttt 16303



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>gb|AC068867.9| Homo sapiens chromosome 15, clone RP11-702M1, complete sequence
          Length = 179455

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 34    gaagcatttcaagncatctcttt 56
             ||||||||||||| |||||||||
Sbjct: 79407 gaagcatttcaagtcatctcttt 79429



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>gb|AC090815.3| Homo sapiens chromosome 15, clone RP11-1078O1, complete sequence
          Length = 180352

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 34    gaagcatttcaagncatctcttt 56
             ||||||||||||| |||||||||
Sbjct: 86175 gaagcatttcaagtcatctcttt 86153



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>gb|AC068472.5|AC068472 Homo sapiens chromosome 11, clone RP11-713P14, complete sequence
          Length = 183659

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 503   attgcaaattgtggggctataaacttgc 530
             |||||||||||||  |||||||||||||
Sbjct: 40881 attgcaaattgtgctgctataaacttgc 40908



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 526      cttgctggttggtctccttc 545
                ||||||||||||||||||||
Sbjct: 22554746 cttgctggttggtctccttc 22554765



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>gb|AC012501.7| Homo sapiens BAC clone RP11-440F15 from 2, complete sequence
          Length = 214838

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 503    attgcaaattgtggggctataaacttgc 530
              |||||||||||||  |||||||||||||
Sbjct: 142607 attgcaaattgtgctgctataaacttgc 142634



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>gb|AC117984.2| Homo sapiens chromosome 16 clone CTD-2503H21, complete sequence
          Length = 190454

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 503    attgcaaattgtggggctataaacttgc 530
              |||||||||||||  |||||||||||||
Sbjct: 118824 attgcaaattgtgttgctataaacttgc 118797



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>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1331F11
          Length = 132205

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   cttgctggttggtctccttc 545
             ||||||||||||||||||||
Sbjct: 69947 cttgctggttggtctccttc 69966



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>gb|AC109256.11| Mus musculus chromosome 8, clone RP23-11D11, complete sequence
          Length = 242101

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     atgtaggaagctcttctgtt 97
              ||||||||||||||||||||
Sbjct: 178348 atgtaggaagctcttctgtt 178329



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>dbj|AP001582.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-215H18, complete
             sequence
          Length = 90256

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 503   attgcaaattgtggggctataaac 526
             ||||||||||||| ||||||||||
Sbjct: 37617 attgcaaattgtgtggctataaac 37594



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>emb|AL590443.1|CNS07EGA chromosome III of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 194439

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 420    aaagcgattccatagaagctcaga 443
              ||||||||||||||||||| ||||
Sbjct: 118494 aaagcgattccatagaagcccaga 118517



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>gb|AC122391.4| Mus musculus BAC clone RP24-81C18 from 14, complete sequence
          Length = 184636

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   ttccctagaatactatcttc 348
             ||||||||||||||||||||
Sbjct: 92952 ttccctagaatactatcttc 92971



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>dbj|AP003116.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1241F12
          Length = 142424

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 503   attgcaaattgtggggctataaac 526
             ||||||||||||| ||||||||||
Sbjct: 26225 attgcaaattgtgtggctataaac 26202



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>dbj|AP003113.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1747F8
          Length = 161402

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 503    attgcaaattgtggggctataaac 526
              ||||||||||||| ||||||||||
Sbjct: 105716 attgcaaattgtgtggctataaac 105693


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,875,392
Number of Sequences: 3902068
Number of extensions: 4875392
Number of successful extensions: 100920
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100774
Number of HSP's gapped (non-prelim): 134
length of query: 587
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 564
effective length of database: 17,143,297,704
effective search space: 9668819905056
effective search space used: 9668819905056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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