ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags22h13 |
|---|---|
| Clone Library Name | barley_pub |
>OTU6B_XENLA (Q6GM06) OTU domain-containing protein 6B| Length = 294 Score = 54.7 bits (130), Expect = 2e-07 Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 2/100 (2%) Frame = +2 Query: 245 EYSVTGIPGDGRCLFRSVAHGECIRSGKPIPNENLQRKLADDLRTLVAD--EFIKRRTET 418 E + IP DG C++R++ H + G + NL+ + AD ++ D F+ + Sbjct: 149 ELQIRQIPSDGHCMYRAIEH-QLNEQGNSLTVANLRSQTADYMQKRAEDFLPFLTNSSTG 207 Query: 419 EWFIEGNFDTYVSQIRKPHVWGGEPELLMASHVLQMPITV 538 + + + F Y + I WGG+ EL SH+L+ PI V Sbjct: 208 DMYTQEEFQKYCTDIVNTPAWGGQLELRALSHILKTPIEV 247
>OTU6B_XENTR (Q5M8L0) OTU domain-containing protein 6B| Length = 294 Score = 49.7 bits (117), Expect = 7e-06 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%) Frame = +2 Query: 245 EYSVTGIPGDGRCLFRSVAHGECIRSGKPIPNENLQRKLADDLRTLVAD--EFIKRRTET 418 E + IP DG C++R++ H + G + NL+ + AD ++ D F+ + Sbjct: 149 ELQIRQIPSDGHCMYRAIEH-QLRERGNDLTVANLRSQTADYMQNHAEDFLPFLTNSSTG 207 Query: 419 EWFIEGNFDTYVSQIRKPHVWGGEPELLMASHVLQMPITV 538 + + + F Y + I WGG+ EL SH+L+ I V Sbjct: 208 DMYTQEEFLKYCTDIVNTPAWGGQLELRALSHILKTAIEV 247
>OTU6B_BRARE (Q7ZV00) OTU domain-containing protein 6B| Length = 293 Score = 48.1 bits (113), Expect = 2e-05 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 2/105 (1%) Frame = +2 Query: 230 KKVYTEYSVTGIPGDGRCLFRSVAHGECIRSGKPIPNENLQRKLADDLRTLVAD--EFIK 403 K V + I DG C++R+V H + G + + L+ + A +R+ D F+ Sbjct: 141 KLVERHLQIKEISSDGHCMYRAVEH-QLTERGLALGLKELRDQTAQYMRSHADDFMPFLT 199 Query: 404 RRTETEWFIEGNFDTYVSQIRKPHVWGGEPELLMASHVLQMPITV 538 + + F+ Y S + WGG+ EL S VLQ+PI V Sbjct: 200 NPNTGDMYTAEEFEKYCSDVADTAAWGGQLELKALSQVLQLPIEV 244
>OTU6A_MOUSE (Q6IE21) OTU domain-containing protein 6A (Hin-6 protease)| Length = 290 Score = 43.9 bits (102), Expect = 4e-04 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 3/95 (3%) Frame = +2 Query: 263 IPGDGRCLFRSVAHGECIRSGKPIPNENLQRKLADDLRTLVADEFIKRRTETE---WFIE 433 IP DG C++R++ + + S + E+L+ + A +R + D+F+ TE E ++ Sbjct: 147 IPADGHCMYRAI-QDQLVFS---VTIESLRYRTAYYMRKHI-DDFLPFFTEPEAGNFYTR 201 Query: 434 GNFDTYVSQIRKPHVWGGEPELLMASHVLQMPITV 538 +F Y I WGG+ EL SHVLQ PI V Sbjct: 202 EDFLRYCDDIVHNASWGGQLELRALSHVLQTPIEV 236
>OTU6B_MOUSE (Q8K2H2) OTU domain-containing protein 6B| Length = 294 Score = 42.7 bits (99), Expect = 8e-04 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 2/100 (2%) Frame = +2 Query: 245 EYSVTGIPGDGRCLFRSVAHGECIRSGKPIPNENLQRKLADDLRTLVAD--EFIKRRTET 418 E + IP DG C++ ++ + + +L+R+ A+ ++T D F+ + Sbjct: 147 ELEIKQIPSDGHCMYGAL-EDQLREQDCALTVASLRRQTAEYMQTHSDDFLPFLTNPSTG 205 Query: 419 EWFIEGNFDTYVSQIRKPHVWGGEPELLMASHVLQMPITV 538 + + F Y I WGG+ EL SH+LQ PI + Sbjct: 206 DMYTPEEFGKYCDDIVNTAAWGGQLELRALSHILQTPIEI 245
>OTU6B_HUMAN (Q8N6M0) OTU domain-containing protein 6B| Length = 293 Score = 41.2 bits (95), Expect = 0.002 Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 2/100 (2%) Frame = +2 Query: 245 EYSVTGIPGDGRCLFRSVAHGECIRSGKPIPNENLQRKLADDLRTLVAD--EFIKRRTET 418 + + IP DG C+++++ + + L+ + A+ +++ V D F+ Sbjct: 146 QLEIKQIPSDGHCMYKAI-EDQLKEKDCALTVVALRSQTAEYMQSHVEDFLPFLTNPNTG 204 Query: 419 EWFIEGNFDTYVSQIRKPHVWGGEPELLMASHVLQMPITV 538 + + F Y I WGG+ EL SH+LQ PI + Sbjct: 205 DMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTPIEI 244
>YHB3_YEAST (P38747) Hypothetical 36.1 kDa protein in YLF2-PRPS4 intergenic| region Length = 307 Score = 41.2 bits (95), Expect = 0.002 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 4/98 (4%) Frame = +2 Query: 263 IPGDGRCLFRSVAHGECIRSGKPIPNENLQ----RKLADDLRTLVADEFIKRRTETEWFI 430 I DG CLF S+ +R ++++ R L+ + D+FI + E Sbjct: 172 IQPDGHCLFASILDQLKLRHDPKKLDQDMDVMKLRWLSCNYVQEHRDDFIPYLFDEETMK 231 Query: 431 EGNFDTYVSQIRKPHVWGGEPELLMASHVLQMPITVYM 544 + D Y ++ WGGE E+L SHV PI++ M Sbjct: 232 MKDIDEYTKEMEHTAQWGGEIEILALSHVFDCPISILM 269
>OTU6A_HUMAN (Q7L8S5) OTU domain-containing protein 6A| Length = 288 Score = 40.0 bits (92), Expect = 0.005 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 3/95 (3%) Frame = +2 Query: 263 IPGDGRCLFRSVAHGECIRSGKPIPNENLQRKLADDLRTLVADEFIKRRTETEW---FIE 433 IP DG C++R++ + + S + E L+ + A ++ V DEF+ + E F Sbjct: 146 IPADGHCMYRAI-QDQLVFS---VSVEMLRCRTASYMKKHV-DEFLPFFSNPETSDSFGY 200 Query: 434 GNFDTYVSQIRKPHVWGGEPELLMASHVLQMPITV 538 +F Y I + WGG+ EL SHVL+ PI V Sbjct: 201 DDFMIYCDNIVRTTAWGGQLELRALSHVLKTPIEV 235
>OTU6B_CHICK (Q5ZIP6) OTU domain-containing protein 6B| Length = 302 Score = 39.7 bits (91), Expect = 0.007 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 2/94 (2%) Frame = +2 Query: 263 IPGDGRCLFRSVAHGECIRSGKPIPNENLQRKLADDLRTLVAD--EFIKRRTETEWFIEG 436 IP DG C++R++ + L+ + A + + D F+ + + + Sbjct: 161 IPSDGHCMYRAI-EDQLKDHHNSWTVATLRNQTAKYIHSHFDDFLPFLTNPNTGDMYSKE 219 Query: 437 NFDTYVSQIRKPHVWGGEPELLMASHVLQMPITV 538 F+ Y I WGG+ EL SH+LQ PI V Sbjct: 220 EFEKYCDDIANTAAWGGQLELRALSHILQTPIEV 253
>VL96_IRV1 (P22856) L96 protein| Length = 867 Score = 37.7 bits (86), Expect = 0.027 Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 14/107 (13%) Frame = +2 Query: 248 YSVTGIPGDGRCLFRSVAHGECIRSGKPIPNENLQRKLADDLRTLVADEFIKRRTETEWF 427 Y V + GDG CLFR+V G+ +R N+N++ +DLR V + E + Sbjct: 606 YKVIPVKGDGNCLFRAV--GKSLRL-----NQNIKYS-HEDLRAQVVTYLTSHKEFLEPY 657 Query: 428 IE--------------GNFDTYVSQIRKPHVWGGEPELLMASHVLQM 526 +E N + Y+ I KP WG L + S +L++ Sbjct: 658 LEYVTESGDTTPQEYAKNVERYIKNISKPGTWGDFICLRVLSEILKV 704
>OTUD3_HUMAN (Q5T2D3) OTU domain-containing protein 3| Length = 398 Score = 36.2 bits (82), Expect = 0.077 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 4/97 (4%) Frame = +2 Query: 263 IPGDGRCLFRSVAHGECIRSGKPIPNENLQRKLADDL--RTLVADEFIKRRTETEWFIEG 436 +PGDG CLFR++ + L+ + L R D IK+R + E F+E Sbjct: 70 VPGDGNCLFRAL-------------GDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVED 116 Query: 437 N--FDTYVSQIRKPHVWGGEPELLMASHVLQMPITVY 541 + F+ +V+ + KP + G ++ + Q+ + ++ Sbjct: 117 DIPFEKHVASLAKPGTFAGNDAIVAFARNHQLNVVIH 153
>GYRA_BACHD (O50628) DNA gyrase subunit A (EC 5.99.1.3)| Length = 833 Score = 34.7 bits (78), Expect = 0.23 Identities = 19/74 (25%), Positives = 43/74 (58%), Gaps = 5/74 (6%) Frame = +3 Query: 21 QKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKVALSSS----- 185 +++K+ + +KE+ ++ ++ ++++D +EEL + KE YN +K A+S+S Sbjct: 435 ERDKIEAEYKELIERIAELKAILADHEKVLDIIREELLELKEKYNDERKTAISASEDMFE 494 Query: 186 TMTLIPKHPLVVLM 227 LIP+ +V+ + Sbjct: 495 DEDLIPRQNVVITL 508
>OTUD4_HUMAN (Q01804) OTU domain-containing protein 4 (HIV-1-induced protein| HIN-1) Length = 145 Score = 34.3 bits (77), Expect = 0.29 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = +2 Query: 401 KRRTETEWFIEGNFDTYVSQIRKPHVWGGEPELLMASHVLQMPITVY 541 + R + E FIEG+F+ Y+ ++ P W G+ E+ S + + +Y Sbjct: 9 ENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFIIY 55
>SYCP1_MOUSE (Q62209) Synaptonemal complex protein 1 (SCP-1)| Length = 993 Score = 33.9 bits (76), Expect = 0.38 Identities = 16/53 (30%), Positives = 33/53 (62%) Frame = +3 Query: 6 ENLLAQKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTK 164 +N+LA+ +KL+ K++EK A +QE ++ +++T ++E+ +E TK Sbjct: 434 KNILAEDQKLLDEKKQVEKLAEELQEKEQELTFLLETREKEVHDLQEQVTVTK 486
>PACN2_HUMAN (Q9UNF0) Protein kinase C and casein kinase substrate in neurons| protein 2 Length = 486 Score = 33.9 bits (76), Expect = 0.38 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Frame = +3 Query: 18 AQKEKLMSVFKEIEKKA--FLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKK 167 A KE+ +++ +E KA L E KK Q+ I+ K+++ KTKE Y K+ K Sbjct: 162 ACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLK 213
>PACN2_RAT (Q9QY17) Protein kinase C and casein kinase substrate in neurons 2| protein (Synaptic dynamin-associated protein II) (Syndapin 2) (Syndapin-II) (SdpII) Length = 488 Score = 32.7 bits (73), Expect = 0.86 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Frame = +3 Query: 18 AQKEKLMSVFKEIEKKA--FLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKK 167 A KE+ ++V +E KA L E KK Q+ I+ K+++ KTK+ Y K K Sbjct: 162 ACKEEKLAVSREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKDKYEKALK 213
>PACN2_XENLA (Q9DDA9) Protein kinase C and casein kinase substrate in neurons| protein 2 (x-PACSIN2) Length = 477 Score = 32.7 bits (73), Expect = 0.86 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +3 Query: 18 AQKEKLMSVFKEIEKKA--FLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKK 167 A KE+ ++ +E KA + E KK Q+ ++ K++ KTKE Y K+ K Sbjct: 162 ACKEEKLATSRETNSKADPAMNPEQLKKLQDKVEKSKQDSQKTKEKYEKSLK 213
>PACN2_MOUSE (Q9WVE8) Protein kinase C and casein kinase substrate in neurons| protein 2 Length = 486 Score = 32.7 bits (73), Expect = 0.86 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Frame = +3 Query: 18 AQKEKLMSVFKEIEKKA--FLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKK 167 A KE+ +++ +E KA L E KK Q+ I+ K+++ KTK+ Y K+ K Sbjct: 162 ACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKDKYEKSLK 213
>Y1732_AQUAE (O67622) UPF0144 protein aq_1732| Length = 558 Score = 32.3 bits (72), Expect = 1.1 Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Frame = +3 Query: 24 KEKLMSVFKEIEKKAF-LVQEDYKKTQEMIDTHKEELDKTKEDYNKTKK 167 KEK + KE ++ A +V+E +K +++I KEE+++ KE+ + KK Sbjct: 58 KEKAEVILKEAKESAEKIVREAEEKAEKLIREAKEEVERIKEEVERRKK 106
>RRPL_DUGBV (Q66431) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)| Length = 4036 Score = 32.3 bits (72), Expect = 1.1 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 1/100 (1%) Frame = +2 Query: 248 YSVTGIPGDGRCLFRSVAHGECIRSGKPIPNENLQRKLADDLRTLVADEFIKRRTETEWF 427 + V PGDG C + S+A + + RK+ + L+ L A+ + TE E Sbjct: 29 FEVIRQPGDGNCFYHSIAE-----LFFDVKTPSSFRKVKEHLQ-LAAEVYYD--TEPEAV 80 Query: 428 IEG-NFDTYVSQIRKPHVWGGEPELLMASHVLQMPITVYM 544 G + D Y+ K + WGG E M S LQ I +++ Sbjct: 81 GTGISKDEYIKVAMKDNEWGGSLEASMLSKHLQTTIILWV 120
>NOC3L_BRARE (Q6DRN3) Nucleolar complex protein 3 homolog (NOC3 protein homolog)| (NOC3-like protein) (Nucleolar complex-associated protein 3-like protein) Length = 800 Score = 32.3 bits (72), Expect = 1.1 Identities = 20/61 (32%), Positives = 35/61 (57%) Frame = +3 Query: 18 AQKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKVALSSSTMTL 197 A K+K MS FKE K +Q +KK +E + ++EL + + +K KK+ L + T+ + Sbjct: 442 APKKKFMS-FKEKRKNLSRMQRKWKKAEEKL---QKELLEAEATESKEKKIKLHTETLNV 497 Query: 198 I 200 + Sbjct: 498 V 498
>PACN2_CHICK (O13154) Protein kinase C and casein kinase substrate in neurons| protein 2 (Focal adhesion protein of 52 kDa) (FAP52) Length = 448 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Frame = +3 Query: 18 AQKEKLMSVFKEIEKKA--FLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKK 167 A KE+ +++ +E KA L E KK Q+ ++ K+++ KTK Y K+ K Sbjct: 162 ACKEEKLAISRETNSKADPALNPEQLKKLQDKVERSKQDVLKTKAKYEKSLK 213
>CWLO_BACSU (P40767) Peptidoglycan DL-endopeptidase cwlO precursor (EC 3.4.-.-)| (D-gamma-glutamyl-meso-diaminopimelyl DL-endopeptidase) (PSPA2) Length = 473 Score = 32.0 bits (71), Expect = 1.5 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Frame = +3 Query: 24 KEKLMSVFKE----IEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKK 167 KEK ++ +E IEK+ + + T I+ KEE DKTKE+ K KK Sbjct: 54 KEKELTELQENQSKIEKELKDINDKALDTSNKIEDKKEENDKTKEEIKKLKK 105
>MUTS2_THEMA (Q9X105) MutS2 protein| Length = 757 Score = 31.6 bits (70), Expect = 1.9 Identities = 19/90 (21%), Positives = 48/90 (53%) Frame = +3 Query: 12 LLAQKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKVALSSSTM 191 L ++ +L + + + +K L++E+ +K Q+ + + + +K +EDY K +++ + Sbjct: 498 LSREEMELEGLIRSLHEKISLLEEEKRKLQKEREEYMKLREKYEEDYKKLRRMKIEEFDK 557 Query: 192 TLIPKHPLVVLMGRKFTQSILSLAFLGTVD 281 L + + + ++ Q+I +A G+VD Sbjct: 558 ELRELNDYIRKVKKELDQAI-HVAKTGSVD 586
>TAOK3_CHICK (Q9I9E0) Serine/threonine-protein kinase TAO3 (EC 2.7.11.1)| (Thousand and one amino acid protein 3) (Kinase from chicken) Length = 898 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 13/61 (21%) Frame = +3 Query: 6 ENLLAQKEKLMSVFKEIEKKAFL---------VQEDY----KKTQEMIDTHKEELDKTKE 146 + +LAQ++K M+ F E +KK + + ED+ K+ QE I HKE L T+ Sbjct: 535 QQILAQQKKDMATFLESQKKQYKLCKEKIKEEMNEDHSTPKKEKQERISKHKENLQHTQA 594 Query: 147 D 149 + Sbjct: 595 E 595
>HCY2_CARAE (P84293) Hemocyanin subunit 2 (CaeSS2)| Length = 650 Score = 31.2 bits (69), Expect = 2.5 Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 2/29 (6%) Frame = +2 Query: 188 HDIDSKTSTSCAHGKKVYTE--YSVTGIP 268 HDI+ +TS + HGK+++ E SVTG+P Sbjct: 537 HDIEDRTSEAIPHGKELHIEEFESVTGLP 565
>CR034_MOUSE (Q8CDV0) Protein C18orf34 homolog| Length = 866 Score = 25.8 bits (55), Expect(2) = 2.5 Identities = 15/58 (25%), Positives = 33/58 (56%) Frame = +3 Query: 12 LLAQKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKVALSSS 185 LL +E+L KE+E +A ++ +++ +M+ ++ ++ K++ + TKK L S Sbjct: 579 LLEVEEQL----KELEAEAVRIRYLHRQHSKMLHNIRKRKERVKKNVDATKKKLLKKS 632 Score = 23.9 bits (50), Expect(2) = 2.5 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = +2 Query: 302 HGECIRSGKPIPNENLQRKLADDLRTLVADEFIKRRTETEWFIEGNFD 445 H +CI K I NL+R ++ + +EF K + + E + G +D Sbjct: 664 HEKCIELSKEIRIMNLERTNYEERLKKLQEEFFKLQFDRE-HVHGVYD 710
>TAOK3_RAT (Q53UA7) Serine/threonine-protein kinase TAO3 (EC 2.7.11.1)| (Thousand and one amino acid protein 3) (Jun kinase-inhibitory kinase) (JNK/SAPK-inhibitory kinase) (Axotomy-related gene 357 protein) Length = 898 Score = 30.8 bits (68), Expect = 3.3 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 13/61 (21%) Frame = +3 Query: 6 ENLLAQKEKLMSVFKEIEKKAFLV---------QEDY----KKTQEMIDTHKEELDKTKE 146 + +LAQ++K ++ F E +KK + + ED+ K+ QE I HKE L T+ Sbjct: 535 QQILAQQKKDLTTFLESQKKQYKICKEKIKEEMNEDHSTPKKEKQERISKHKENLQHTQA 594 Query: 147 D 149 + Sbjct: 595 E 595
>TAOK3_PONPY (Q5R4F3) Serine/threonine-protein kinase TAO3 (EC 2.7.11.1)| (Thousand and one amino acid protein 3) Length = 898 Score = 30.8 bits (68), Expect = 3.3 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 13/61 (21%) Frame = +3 Query: 6 ENLLAQKEKLMSVFKEIEKKAFLV---------QEDY----KKTQEMIDTHKEELDKTKE 146 + +LAQ++K ++ F E +KK + + ED+ K+ QE I HKE L T+ Sbjct: 535 QQILAQQKKDLTTFLESQKKQYKICKEKIKEEMNEDHSTPKKEKQERISKHKENLQHTQA 594 Query: 147 D 149 + Sbjct: 595 E 595
>TAOK3_MOUSE (Q8BYC6) Serine/threonine-protein kinase TAO3 (EC 2.7.11.1)| (Thousand and one amino acid protein 3) Length = 898 Score = 30.8 bits (68), Expect = 3.3 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 13/61 (21%) Frame = +3 Query: 6 ENLLAQKEKLMSVFKEIEKKAFLV---------QEDY----KKTQEMIDTHKEELDKTKE 146 + +LAQ++K ++ F E +KK + + ED+ K+ QE I HKE L T+ Sbjct: 535 QQILAQQKKDLTTFLESQKKQYKICKEKIKEEMNEDHSTPKKEKQERISKHKENLQHTQA 594 Query: 147 D 149 + Sbjct: 595 E 595
>TAOK3_HUMAN (Q9H2K8) Serine/threonine-protein kinase TAO3 (EC 2.7.11.1)| (Thousand and one amino acid protein 3) (Jun kinase-inhibitory kinase) (JNK/SAPK-inhibitory kinase) (Dendritic cell-derived protein kinase) (Cutaneous T-cell lymphoma tumor antigen H Length = 898 Score = 30.8 bits (68), Expect = 3.3 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 13/61 (21%) Frame = +3 Query: 6 ENLLAQKEKLMSVFKEIEKKAFLV---------QEDY----KKTQEMIDTHKEELDKTKE 146 + +LAQ++K ++ F E +KK + + ED+ K+ QE I HKE L T+ Sbjct: 535 QQILAQQKKDLTTFLESQKKQYKICKEKIKEEMNEDHSTPKKEKQERISKHKENLQHTQA 594 Query: 147 D 149 + Sbjct: 595 E 595
>CING_MOUSE (P59242) Cingulin| Length = 1191 Score = 30.8 bits (68), Expect = 3.3 Identities = 14/46 (30%), Positives = 28/46 (60%) Frame = +3 Query: 12 LLAQKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKED 149 L A+++K+ S+ +E++++ E+ Q M +KEEL TK++ Sbjct: 531 LEAERQKMSSLVRELQRELEETSEETGHWQSMFQKNKEELRATKQE 576
>YJL2_YEAST (P47025) Hypothetical 80.0 kDa Trp-Asp repeats-containing protein| in ASF1-CCT7 intergenic region Length = 714 Score = 30.8 bits (68), Expect = 3.3 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 8/70 (11%) Frame = +3 Query: 6 ENLLAQKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKE--------ELDKTKEDYNKT 161 ENL +KEKL+ IE+ L++++ K+ + +D +E D+ ED + Sbjct: 259 ENLRQKKEKLLGKIANIEQNQLLLEDNLKQIDDRLDFLEEYGLEVIEANSDENAEDDGMS 318 Query: 162 KKVALSSSTM 191 ++ AL + + Sbjct: 319 ERKALKNDAI 328
>TR150_XENLA (Q5BJ39) Thyroid hormone receptor-associated protein 3 (Thyroid| hormone receptor-associated protein complex 150 kDa component) (Trap150) Length = 951 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/35 (40%), Positives = 25/35 (71%) Frame = +3 Query: 63 KAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKK 167 K + +++D++K +M D HKEELD+ +D +K +K Sbjct: 407 KRYKLRDDFEK--KMADFHKEELDEHDKDKSKGRK 439
>TR150_MOUSE (Q569Z6) Thyroid hormone receptor-associated protein 3 (Thyroid| hormone receptor-associated protein complex 150 kDa component) (Trap150) Length = 951 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/35 (40%), Positives = 25/35 (71%) Frame = +3 Query: 63 KAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKK 167 K + +++D++K +M D HKEELD+ +D +K +K Sbjct: 407 KRYKLRDDFEK--KMADFHKEELDEHDKDKSKGRK 439
>CRLS1_DROME (Q8MZC4) Probable cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin| synthase) (CLS) Length = 322 Score = 30.4 bits (67), Expect = 4.2 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Frame = +3 Query: 54 IEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKV--ALSSSTMTLIPKHPLVVLM 227 IE+K FLV + + ++ + +E++D+ +E+ + L+ S L P V++ Sbjct: 90 IERKNFLVDDIREARHKVQERVREKIDEIREERENIMTIPNMLTISRAVLSPYIGYVIVQ 149 Query: 228 GRKFTQSILSLAFLGTVD 281 G FT + LAF G D Sbjct: 150 G-DFTLGMSLLAFAGITD 166
>PLEC1_RAT (P30427) Plectin-1 (PLTN) (PCN)| Length = 4687 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/51 (27%), Positives = 31/51 (60%) Frame = +3 Query: 21 QKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKVA 173 +K KL +F++ KA +QE+ ++ Q+ ++ K+EL + E+ + ++ A Sbjct: 2652 EKAKLEQLFQDEVAKAKQLQEEQQRQQQQMEQEKQELVASMEEARRRQREA 2702
>RF1_BORGA (Q662G9) Peptide chain release factor 1 (RF-1)| Length = 357 Score = 30.0 bits (66), Expect = 5.6 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +3 Query: 27 EKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKVAL 176 EK++S + K L +ED ++ +E+I +LDK KED K+ L Sbjct: 53 EKILSQIND--NKTILEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILL 100
>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non| muscle) Length = 2116 Score = 30.0 bits (66), Expect = 5.6 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 7/54 (12%) Frame = +3 Query: 27 EKLMSVFKEIEKKA-------FLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKK 167 EKL + +K +K+A V+ D +K I K+ +DK + D++KTK+ Sbjct: 2038 EKLETDYKRAKKEAADEQQQRLTVENDLRKHLSEISLLKDAIDKLQRDHDKTKR 2091
>SYR_LEPIN (Q8F5J3) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 596 Score = 30.0 bits (66), Expect = 5.6 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = +3 Query: 3 TENLLAQKEKLMSVFKEIEKKAFLVQEDYKK 95 +E L + +K++SV K++EK + QED KK Sbjct: 297 SERTLHEADKVLSVMKDLEKSGKIFQEDGKK 327
>SYR_LEPIC (Q72QL1) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 596 Score = 30.0 bits (66), Expect = 5.6 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = +3 Query: 3 TENLLAQKEKLMSVFKEIEKKAFLVQEDYKK 95 +E L + +K++SV K++EK + QED KK Sbjct: 297 SERTLHEADKVLSVMKDLEKSGKIFQEDGKK 327
>RAG1_XENLA (Q91829) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1045 Score = 30.0 bits (66), Expect = 5.6 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Frame = -2 Query: 592 LAILCD--RYQTARCFFAHINSDRHLKNMRSHEQFWLSSPHMWLPN-LRDICIEIALNKP 422 + LCD R + A+ H + H +N++ +E W S+PH P+ LRD ++ Sbjct: 732 ICTLCDATRLEAAQNLVNHSITRSHCENLQRYE-MWRSNPHHESPDELRDRVKGVSAKPF 790 Query: 421 FSLCPSLDKL 392 PS+D L Sbjct: 791 IETLPSIDAL 800
>MSP1_PLAF3 (P19598) Merozoite surface protein 1 precursor (Merozoite surface| antigens) (PMMSA) (P190) Length = 1682 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +3 Query: 21 QKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKV 170 QK L+ +K I++ V+ D K QE I +++ L K K+D KKV Sbjct: 1382 QKNTLLKSYKYIKES---VENDIKFAQEGISYYEKVLAKYKDDLESIKKV 1428
>RF1_BORBU (O51214) Peptide chain release factor 1 (RF-1)| Length = 357 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +3 Query: 27 EKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKVAL 176 EK++S + K L +ED ++ +E+I +LDK KED K+ L Sbjct: 53 EKILSQINDT--KTILEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILL 100
>EST1A_HUMAN (Q86US8) Telomerase-binding protein EST1A (Ever shorter telomeres| 1A) (Telomerase subunit EST1A) (EST1-like protein A) (hSmg5/7a) Length = 1419 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +3 Query: 12 LLAQKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKK 167 +L KE LMS+F+E ++KA ++M EE D + + + K KK Sbjct: 799 ILTAKESLMSLFEETKRKA----------EQMEKKQHEEFDLSPDQWRKGKK 840
>YFE4_YEAST (P43558) Hypothetical 33.5 kDa protein in SEC53-FET5 intergenic| region Length = 301 Score = 29.6 bits (65), Expect = 7.2 Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 1/111 (0%) Frame = +2 Query: 209 STSCAHGKKVYTEYSVTGIPGDGRCLFRSVAHGECIRSGKPIPNENLQRKLADDLRTLVA 388 ST + G SV + D CLF ++A+G ++ DLR +V+ Sbjct: 96 STEMSIGGSGENVLSVHPVLDDNSCLFHAIAYG------------IFKQDSVRDLREMVS 143 Query: 389 DEFIKRRTE-TEWFIEGNFDTYVSQIRKPHVWGGEPELLMASHVLQMPITV 538 E + + + ++ Y I K WGG E+ + S L + I V Sbjct: 144 KEVLNNPVKFNDAILDKPNKDYAQWILKMESWGGAIEIGIISDALAVAIYV 194
>REST_CHICK (O42184) Restin (Cytoplasmic linker protein 170) (CLIP-170)| Length = 1433 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +3 Query: 12 LLAQKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKK 167 L EK + + K +E+ A Q+ + QE + TH+EEL K ++ KK Sbjct: 949 LTKANEKAVQLQKNVEQTA---QKAEQSQQETLKTHQEELKKMQDQLTDMKK 997 Score = 29.3 bits (64), Expect = 9.5 Identities = 16/65 (24%), Positives = 33/65 (50%) Frame = +3 Query: 12 LLAQKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKVALSSSTM 191 LL K++ ++ KEI+++ +Q+ T +I EEL+K + + + S+ T+ Sbjct: 1201 LLEMKKRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTL 1260 Query: 192 TLIPK 206 + K Sbjct: 1261 QSVVK 1265
>MSP1_PLAFP (P50495) Merozoite surface protein 1 precursor (Merozoite surface| antigens) (PMMSA) (GP195) Length = 1726 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +3 Query: 21 QKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKV 170 QK L+ +K I++ V+ D K QE I +++ L K K+D KKV Sbjct: 1425 QKNTLLKSYKYIKES---VENDIKFAQEGISYYEKVLAKYKDDLESIKKV 1471
>MSP1_PLAFC (P04934) Merozoite surface protein 1 precursor (Merozoite surface| antigens) (PMMSA) (P195) Length = 1726 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +3 Query: 21 QKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKV 170 QK L+ +K I++ V+ D K QE I +++ L K K+D KKV Sbjct: 1425 QKNTLLKSYKYIKES---VENDIKFAQEGISYYEKVLAKYKDDLESIKKV 1471
>AL2SB_RAT (Q6AY08) Amyotrophic lateral sclerosis 2 chromosomal region| candidate gene 12 protein homolog Length = 411 Score = 29.6 bits (65), Expect = 7.2 Identities = 16/48 (33%), Positives = 31/48 (64%) Frame = +3 Query: 27 EKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKV 170 +KL+S ++ + A + Q+ +++E+ THKE+L+K + Y +T KV Sbjct: 152 QKLLSNEMDL-RCADMKQKFETESRELKQTHKEQLEKLENSYKETLKV 198
>MSP1_PLAFM (P08569) Merozoite surface protein 1 precursor (Merozoite surface| antigens) (PMMSA) (P190) Length = 1701 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +3 Query: 21 QKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKV 170 QK L+ +K I++ V+ D K QE I +++ L K K+D KKV Sbjct: 1400 QKNTLLKSYKYIKES---VENDIKFAQEGISYYEKVLAKYKDDLESIKKV 1446
>MSP1_PLAFF (P13819) Merozoite surface protein 1 precursor (Merozoite surface| antigens) (PMMSA) Length = 1701 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +3 Query: 21 QKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKV 170 QK L+ +K I++ V+ D K QE I +++ L K K+D KKV Sbjct: 1400 QKNTLLKSYKYIKES---VENDIKFAQEGISYYEKVLAKYKDDLESIKKV 1446
>5HT1D_CAVPO (Q60484) 5-hydroxytryptamine 1D receptor (5-HT-1D) (Serotonin| receptor 1D) Length = 376 Score = 29.6 bits (65), Expect = 7.2 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%) Frame = +2 Query: 227 GKKVYTEYSVTGIPGDGRCLFRSVAHGECIRSGKPIPNENLQRKLADDL--RTLVADEFI 400 GK+ T + +TG G C H + G P+ +++ KLAD + R ++ Sbjct: 236 GKRFTTAHLITGSAGSSLCSLNPSLHEGHMHPGSPLFFNHVRIKLADSVLERKRISAARE 295 Query: 401 KRRTETEWFIEGNF 442 ++ T+T I G F Sbjct: 296 RKATKTLGIILGAF 309
>EST1A_MOUSE (P61406) Telomerase-binding protein EST1A (Ever shorter telomeres| 1A) (Telomerase subunit EST1A) (EST1-like protein A) Length = 1418 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +3 Query: 12 LLAQKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKK 167 +L KE LMS+F+E ++KA ++M EE D + + + K KK Sbjct: 798 ILTAKESLMSLFEETKRKA----------EQMEKKQHEEFDMSPDKWRKGKK 839
>5HT1D_HUMAN (P28221) 5-hydroxytryptamine 1D receptor (5-HT-1D) (Serotonin| receptor 1D) (5-HT-1D-alpha) Length = 377 Score = 29.3 bits (64), Expect = 9.5 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = +2 Query: 224 HGKKVYTEYSVTGIPGDGRCLFRSVAH-GECIRSGKPIPNENLQRKLAD 367 +GK+ T + +TG G C S H G +G P+ +++ KLAD Sbjct: 235 YGKRFTTAHLITGSAGSSLCSLNSSLHEGHSHSAGSPLFFNHVKIKLAD 283
>PLCB1_RAT (P10687) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| beta 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (Phospholipase C-beta-1) (PLC-beta-1) (PLC-I) (PLC-154) Length = 1216 Score = 29.3 bits (64), Expect = 9.5 Identities = 18/60 (30%), Positives = 31/60 (51%) Frame = +3 Query: 6 ENLLAQKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKVALSSS 185 E L QK + K ++ LV+ +KKT E+I H + ++ + DY + ++ AL S Sbjct: 911 EELKQQKSFVKLQKKHYKEMKDLVKRHHKKTTELIKEHTTKYNEIQNDYLR-RRAALEKS 969
>OPPD_MYCPN (P75552) Oligopeptide transport ATP-binding protein oppD| Length = 423 Score = 29.3 bits (64), Expect = 9.5 Identities = 16/59 (27%), Positives = 36/59 (61%), Gaps = 5/59 (8%) Frame = +3 Query: 39 SVFKEIEKKAFLVQEDYK---KTQEM-IDTHKEELDKTKEDYN-KTKKVALSSSTMTLI 200 +++ +++ + + D K +T+ + +DT+KE+L + KE Y KT K A+ + T+ ++ Sbjct: 132 AIYVSCKRRYYQTKSDLKYDLQTERIDLDTYKEKLAQAKETYKAKTTKAAVHAKTLEIL 190
>RPOA_THETN (Q8R7Y2) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP| alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) Length = 315 Score = 29.3 bits (64), Expect = 9.5 Identities = 15/57 (26%), Positives = 29/57 (50%) Frame = +3 Query: 12 LLAQKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKKVALSS 182 L+ +K +S E + V++ KK ++ +D EELD + YN K+ +++ Sbjct: 217 LIKYFQKFISFTGEYKSPDVFVEKQEKKVEKPLDMTIEELDLSVRSYNCLKRAGINT 273
>CCD50_HUMAN (Q8IVM0) Coiled-coil domain-containing protein 50 (Protein Ymer)| Length = 306 Score = 29.3 bits (64), Expect = 9.5 Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Frame = +3 Query: 15 LAQKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYN---KTKKVALSSS 185 +AQ E++ + EKKA YKK +E K LDK K+D KT K A S S Sbjct: 199 VAQDEEIARLLMAEEKKA------YKKAKER---EKSSLDKRKQDPEWKPKTAKAANSKS 249 Query: 186 TMTLIPKH 209 + P H Sbjct: 250 KESDEPHH 257
>RAD50_NANEQ (P62135) DNA double-strand break repair rad50 ATPase| Length = 786 Score = 29.3 bits (64), Expect = 9.5 Identities = 16/54 (29%), Positives = 30/54 (55%) Frame = +3 Query: 6 ENLLAQKEKLMSVFKEIEKKAFLVQEDYKKTQEMIDTHKEELDKTKEDYNKTKK 167 ENLL++ K+ + KEIE + + E ++ T + ++ K + +K E N+ K Sbjct: 596 ENLLSEISKVKGIIKEIESQIKEI-EKHESTIKQLEEKKRKWEKLVEKLNRIVK 648
>5HT1D_PIG (P79400) 5-hydroxytryptamine 1D receptor (5-HT-1D) (Serotonin| receptor 1D) (5-HT1D) (Fragment) Length = 291 Score = 29.3 bits (64), Expect = 9.5 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Frame = +2 Query: 224 HGKKVYTEYSVTGIPGDGRC-LFRSVAHGECIRSGKPIPNENLQRKLADDL--RTLVADE 394 +GK+ T + +TG G C L S+ G +G P+ +++ KLAD + R ++ Sbjct: 155 YGKRFTTAHLITGSAGSSLCSLNPSLHEGHSHSAGSPLFFNHVKIKLADSVLERKRISAA 214 Query: 395 FIKRRTETEWFIEGNF 442 ++ T+T I G F Sbjct: 215 RERKATKTLGIILGAF 230
>RRBP1_MOUSE (Q99PL5) Ribosome-binding protein 1 (Ribosome receptor protein)| (mRRp) Length = 1605 Score = 29.3 bits (64), Expect = 9.5 Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 3/53 (5%) Frame = +3 Query: 21 QKEKLMSVFKEIEKKAFLVQEDYKKTQ---EMIDTHKEELDKTKEDYNKTKKV 170 +++KL + F+E ++ A +QE+ +K + + + KEE+ + KE K K++ Sbjct: 1502 RRQKLTAEFEEAQRTACRIQEELEKLRAAGPLESSGKEEITQLKERLEKEKRL 1554
>MTRE_METMA (P80651) Tetrahydromethanopterin S-methyltransferase subunit E (EC| 2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit E) Length = 304 Score = 29.3 bits (64), Expect = 9.5 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +3 Query: 204 KHPLVVLMGRKFTQSILSLAFLGTVDACFVLWLMVSALGQGNPYLMRIF 350 K P+ + M R T +I+ AF+ T V +LM LG P M F Sbjct: 120 KQPIYLDMIRSHTPAIMGYAFITTFCVLIVSYLMTVVLGHPFPLTMLAF 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,693,917 Number of Sequences: 219361 Number of extensions: 1534111 Number of successful extensions: 5564 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 5243 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5538 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
