ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags22h13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK070222.1| Oryza sativa (japonica cultivar-group) cDNA clon... 276 8e-71
2ref|XM_475481.1| Oryza sativa (japonica cultivar-group), predic... 151 3e-33
3dbj|AK064293.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 3e-33
4ref|XM_483243.1| Oryza sativa (japonica cultivar-group), mRNA 149 1e-32
5dbj|AK073328.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
6emb|AJ488495.1|OSA488495 Oryza sativa mRNA for SMC4 protein 143 8e-31
7gb|AC108523.2| Oryza sativa (japonica cultivar-group) chromosome... 107 4e-20
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
9gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome... 101 3e-18
10dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
12dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
13dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
14dbj|AB252068.1| Oryza sativa (indica cultivar-group) DNA, SCAR m... 60 9e-06
15dbj|AK120577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
16ref|NM_180385.1| Arabidopsis thaliana cysteine-type peptidase AT... 46 0.13
17ref|NM_115643.2| Arabidopsis thaliana cysteine-type peptidase AT... 46 0.13
18emb|BX824976.1|CNS0A5MJ Arabidopsis thaliana Full-length cDNA Co... 46 0.13
19gb|AY086909.1| Arabidopsis thaliana clone 29384 mRNA, complete s... 46 0.13
20dbj|AK176705.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 46 0.13
21dbj|AK175291.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 46 0.13
22dbj|AK175225.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 46 0.13
23gb|AC122544.1| Genomic sequence for Lycopersicon esculentum, clo... 44 0.53
24gb|AC131776.5| Mus musculus BAC clone RP24-318B19 from chromosom... 44 0.53
25gb|U11310.1|HSSCPXT13 Homo sapiens sterol carrier protein-X/ster... 42 2.1
26gb|BC005911.1| Homo sapiens sterol carrier protein 2, transcript... 42 2.1
27ref|NM_001007250.1| Homo sapiens sterol carrier protein 2 (SCP2)... 42 2.1
28ref|NM_002979.3| Homo sapiens sterol carrier protein 2 (SCP2), t... 42 2.1
29ref|NM_001007099.1| Homo sapiens sterol carrier protein 2 (SCP2)... 42 2.1
30ref|NM_001007100.1| Homo sapiens sterol carrier protein 2 (SCP2)... 42 2.1
31ref|XM_513413.1| PREDICTED: Pan troglodytes similar to sterol ca... 42 2.1
32gb|AC111143.10| Mus musculus chromosome 3, clone RP23-372C7, com... 42 2.1
33emb|AL445183.19| Human DNA sequence from clone RP11-334A14 on ch... 42 2.1
34emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, B... 42 2.1
35emb|CR859768.1| Pongo pygmaeus mRNA; cDNA DKFZp469L1126 (from cl... 42 2.1
36gb|AC078784.24| Homo sapiens 3 BAC RP11-63L4 (Roswell Park Cance... 42 2.1
37emb|CR620432.1| full-length cDNA clone CS0DK001YL01 of HeLa cell... 42 2.1
38emb|CR618704.1| full-length cDNA clone CS0DI010YI02 of Placenta ... 42 2.1
39emb|CR612478.1| full-length cDNA clone CS0DI085YJ15 of Placenta ... 42 2.1
40emb|CR595480.1| full-length cDNA clone CS0DB005YI21 of Neuroblas... 42 2.1
41emb|CR594806.1| full-length cDNA clone CS0DI022YF01 of Placenta ... 42 2.1
42gb|AC090744.5| Homo sapiens chromosome 11, clone RP11-660K15, co... 42 2.1
43gb|S52450.1| sterol carrier protein 2 [human, liver, mRNA, 1229 nt] 42 2.1
44gb|AC068329.8| Homo sapiens chromosome 11, clone RP11-82N10, com... 42 2.1
45gb|DQ000515.1| Synthetic construct clone PSF:103990 sterol carri... 42 2.1
46emb|BX537619.1|HSM806391 Homo sapiens mRNA; cDNA DKFZp686D11188 ... 42 2.1
47emb|BX537618.1|HSM806390 Homo sapiens mRNA; cDNA DKFZp686C12188 ... 42 2.1
48dbj|AB208789.1| Homo sapiens mRNA for sterol carrier protein X i... 42 2.1
49emb|AL805906.7| Mouse DNA sequence from clone RP23-113J20 on chr... 42 2.1
50gb|M55421.1|HUMSTEAA Human sterol carrier protein-2 (SCP-2) mRNA... 42 2.1
51gb|M75884.1|HUMSCP2B Human sterol carrier protein 2 mRNA, comple... 42 2.1
52gb|M75883.1|HUMSCP2A Human sterol carrier protein X/sterol carri... 42 2.1
53gb|BC004658.1| Mus musculus chloride intracellular channel 1, mR... 40 8.3
54gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
55gb|AC107316.3| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.3
56gb|AC144933.4| Mus musculus BAC clone RP24-531B24 from chromosom... 40 8.3
57ref|NM_033444.1| Mus musculus chloride intracellular channel 1 (... 40 8.3
58gb|AC134826.4| Mus musculus BAC clone RP24-459P6 from chromosome... 40 8.3
59gb|AC125190.4| Mus musculus BAC clone RP23-288O24 from chromosom... 40 8.3
60gb|AC115948.12| Mus musculus chromosome 16, clone RP24-568J12, c... 40 8.3
61gb|AC117224.3| Mus musculus BAC clone RP23-356N8 from chromosome... 40 8.3
62gb|AC116597.3| Mus musculus BAC clone RP24-409C23 from chromosom... 40 8.3
63gb|AC102441.6| Mus musculus chromosome 18, clone RP24-160I12, co... 40 8.3
64gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete seq... 40 8.3
65emb|BX530072.8| Human DNA sequence from clone WI2-85925A9 on chr... 40 8.3
66emb|AL359847.24| Human DNA sequence from clone RP11-41D21 on chr... 40 8.3
67emb|CR380950.1| Candida glabrata strain CBS138 chromosome D comp... 40 8.3
68emb|BX294164.13| Zebrafish DNA sequence from clone CH211-266D19 ... 40 8.3
69dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
70gb|AC148346.12| Medicago truncatula clone mth2-25m19, complete s... 40 8.3
71dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 40 8.3
72gb|AC073369.5| Homo sapiens chromosome 10 clone RP11-466H6, comp... 40 8.3
73dbj|AK150611.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 8.3
74dbj|AK153509.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 8.3
75dbj|AK150382.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 8.3
76dbj|AK167765.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length... 40 8.3
77dbj|AK168262.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-... 40 8.3
78dbj|AK088809.1| Mus musculus 2 days neonate thymus thymic cells ... 40 8.3
79dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
80dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
81gb|AC102163.14| Mus musculus chromosome 1, clone RP23-431N20, co... 40 8.3
82gb|AC009410.3| Homo sapiens BAC clone RP11-335M11 from 2, comple... 40 8.3
83gb|AC068539.8| Homo sapiens BAC clone RP11-145M22 from 2, comple... 40 8.3
84dbj|AP003313.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
85emb|AL670413.19| Mouse DNA sequence from clone RP23-298E4 on chr... 40 8.3
86emb|AL807802.22| Mouse DNA sequence from clone RP23-351B24 on ch... 40 8.3
87gb|AC149294.8| Mus musculus chromosome 15, clone RP24-389G21, co... 40 8.3
88gb|AC116555.23| Mus musculus strain C57BL/6J clone rp23-160b14 m... 40 8.3
89gb|AC162949.7| Mus musculus BAC clone RP23-8D10 from chromosome ... 40 8.3
90gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
91gb|AC149284.5| Mus musculus BAC clone RP23-136E9 from 18, comple... 40 8.3
92emb|AL020990.1|HS201D17 Human DNA sequence from clone RP1-201D17... 40 8.3
93gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, compl... 40 8.3
94gb|AC166825.3| Mus musculus BAC clone RP23-368D12 from chromosom... 40 8.3 
>dbj|AK070222.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041O13, full
            insert sequence
          Length = 1377

 Score =  276 bits (139), Expect = 8e-71
 Identities = 336/401 (83%), Gaps = 3/401 (0%)
 Strand = Plus / Plus

                                                                        
Query: 209  tccactagttgtgctcatgggaagaaagtttacacagagtattctgtcactggcattcct 268
            |||||||||| |||||||||||| ||||||| ||| || |||||||| ||||||||||||
Sbjct: 759  tccactagttatgctcatgggaaaaaagtttgcacggattattctgttactggcattcct 818

                                                                        
Query: 269  ggggacggtagatgcttgtttcgttctgtggctcatggtgagtgcattaggtcagggaaa 328
            || || || || |||||||| || ||||||||||||||||  || ||||||||||| || 
Sbjct: 819  ggagatggaaggtgcttgttccgatctgtggctcatggtgcatgtattaggtcaggtaag 878

                                                                        
Query: 329  cccatacctaatgagaatcttcagagaaagctcgctgatgatttaagaacattggttgct 388
            |    |||| ||||  |||| ||||||||| | |||||||| |||||| || |||| || 
Sbjct: 879  cg---acctgatgatgatctccagagaaagatggctgatgacttaagagcaatggtcgcc 935

                                                                        
Query: 389  gatgagtttatcaagagacggacagagactgaatggtttattgagggcaatttcgataca 448
            ||||| ||||||||||||||| ||||||||||||||||| |||||||  | |||||| ||
Sbjct: 936  gatgaatttatcaagagacgggcagagactgaatggtttgttgagggggacttcgatgca 995

                                                                        
Query: 449  tatgtctctcagattaggaagccacatgtgtggggaggagagccagaattgctcatggct 508
            |||||||||| ||||||||||||||||||||||||||| || |||||| || | ||||||
Sbjct: 996  tatgtctctcggattaggaagccacatgtgtggggaggtgaaccagaactgttaatggct 1055

                                                                        
Query: 509  tctcatgttcttcagatgccgatcactgtttatatgcgcgaagaagcagcgggcggtttg 568
            || |||||||||| |||||| || ||||| || ||||  ||  | | ||| || ||||| 
Sbjct: 1056 tcgcatgttcttcggatgccaattactgtgtacatgcatgataaggaagctggtggttta 1115

                                                     
Query: 569  atagcgatcgcagagtatggccaggagtacgggaaggaaga 609
            ||||| || ||||| ||||| |||||||||||||| |||||
Sbjct: 1116 atagcaattgcagaatatggtcaggagtacgggaaagaaga 1156
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>ref|XM_475481.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3726

 Score =  151 bits (76), Expect = 3e-33
 Identities = 124/140 (88%)
 Strand = Plus / Plus

                                                                        
Query: 5    ggaaaatcttcttgctcaaaaggagaagttgatgtctgtttttaaagagattgagaagaa 64
            |||||| ||||||||| ||||||||||| |||||||| |||| |||||||||||||||  
Sbjct: 2673 ggaaaagcttcttgctgaaaaggagaagatgatgtctattttcaaagagattgagaaggc 2732

                                                                        
Query: 65   agcttttcttgttcaagaagattataagaagacccaggagatgattgacacccataaaga 124
            |||||||  ||||||||||||||||||||| || || |||||||| |||| |||||||||
Sbjct: 2733 agcttttactgttcaagaagattataagaaaacacaagagatgatggacaaccataaaga 2792

                                
Query: 125  ggagcttgacaagacaaagg 144
             ||||||||||| |||||||
Sbjct: 2793 tgagcttgacaaaacaaagg 2812
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>dbj|AK064293.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-H08, full
           insert sequence
          Length = 1708

 Score =  151 bits (76), Expect = 3e-33
 Identities = 124/140 (88%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggaaaatcttcttgctcaaaaggagaagttgatgtctgtttttaaagagattgagaagaa 64
           |||||| ||||||||| ||||||||||| |||||||| |||| |||||||||||||||  
Sbjct: 453 ggaaaagcttcttgctgaaaaggagaagatgatgtctattttcaaagagattgagaaggc 512

                                                                       
Query: 65  agcttttcttgttcaagaagattataagaagacccaggagatgattgacacccataaaga 124
           |||||||  ||||||||||||||||||||| || || |||||||| |||| |||||||||
Sbjct: 513 agcttttactgttcaagaagattataagaaaacacaagagatgatggacaaccataaaga 572

                               
Query: 125 ggagcttgacaagacaaagg 144
            ||||||||||| |||||||
Sbjct: 573 tgagcttgacaaaacaaagg 592
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>ref|XM_483243.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1793

 Score =  149 bits (75), Expect = 1e-32
 Identities = 231/283 (81%)
 Strand = Plus / Plus

                                                                        
Query: 263  attcctggggacggtagatgcttgtttcgttctgtggctcatggtgagtgcattaggtca 322
            |||||||| || || |||||||| || || ||||||  |||||| |  ||||||||| ||
Sbjct: 871  attcctggagatggaagatgcttattccgctctgtgattcatggggcatgcattagggca 930

                                                                        
Query: 323  gggaaacccatacctaatgagaatcttcagagaaagctcgctgatgatttaagaacattg 382
            || | ||||||||| |||||  |||||||||||||||| ||||| || || ||  || ||
Sbjct: 931  ggaagacccataccaaatgaagatcttcagagaaagctagctgacgaattgagggcaatg 990

                                                                        
Query: 383  gttgctgatgagtttatcaagagacggacagagactgaatggtttattgagggcaatttc 442
            ||||||||||| ||| | ||||| |||  |||  | |||||||||||||||||  |||||
Sbjct: 991  gttgctgatgaatttgttaagaggcgggaagaatcggaatggtttattgagggagatttc 1050

                                                                        
Query: 443  gatacatatgtctctcagattaggaagccacatgtgtggggaggagagccagaattgctc 502
            || |||||||| || || |||||| | |||||||||||||| || || ||||||||  ||
Sbjct: 1051 gacacatatgtgtcccatattaggcatccacatgtgtggggcggtgaaccagaattattc 1110

                                                       
Query: 503  atggcttctcatgttcttcagatgccgatcactgtttatatgc 545
            |||||||| ||||||||| ||||||| || || ||||| ||||
Sbjct: 1111 atggcttcacatgttcttgagatgccaataacggtttacatgc 1153
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>dbj|AK073328.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029N11, full
            insert sequence
          Length = 1795

 Score =  149 bits (75), Expect = 1e-32
 Identities = 231/283 (81%)
 Strand = Plus / Plus

                                                                        
Query: 263  attcctggggacggtagatgcttgtttcgttctgtggctcatggtgagtgcattaggtca 322
            |||||||| || || |||||||| || || ||||||  |||||| |  ||||||||| ||
Sbjct: 872  attcctggagatggaagatgcttattccgctctgtgattcatggggcatgcattagggca 931

                                                                        
Query: 323  gggaaacccatacctaatgagaatcttcagagaaagctcgctgatgatttaagaacattg 382
            || | ||||||||| |||||  |||||||||||||||| ||||| || || ||  || ||
Sbjct: 932  ggaagacccataccaaatgaagatcttcagagaaagctagctgacgaattgagggcaatg 991

                                                                        
Query: 383  gttgctgatgagtttatcaagagacggacagagactgaatggtttattgagggcaatttc 442
            ||||||||||| ||| | ||||| |||  |||  | |||||||||||||||||  |||||
Sbjct: 992  gttgctgatgaatttgttaagaggcgggaagaatcggaatggtttattgagggagatttc 1051

                                                                        
Query: 443  gatacatatgtctctcagattaggaagccacatgtgtggggaggagagccagaattgctc 502
            || |||||||| || || |||||| | |||||||||||||| || || ||||||||  ||
Sbjct: 1052 gacacatatgtgtcccatattaggcatccacatgtgtggggcggtgaaccagaattattc 1111

                                                       
Query: 503  atggcttctcatgttcttcagatgccgatcactgtttatatgc 545
            |||||||| ||||||||| ||||||| || || ||||| ||||
Sbjct: 1112 atggcttcacatgttcttgagatgccaataacggtttacatgc 1154
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>emb|AJ488495.1|OSA488495 Oryza sativa mRNA for SMC4 protein
          Length = 3711

 Score =  143 bits (72), Expect = 8e-31
 Identities = 123/140 (87%)
 Strand = Plus / Plus

                                                                        
Query: 5    ggaaaatcttcttgctcaaaaggagaagttgatgtctgtttttaaagagattgagaagaa 64
            |||||| ||||||||| ||||||||||| |||||||| |||| |||||||||||||||  
Sbjct: 2658 ggaaaagcttcttgctgaaaaggagaagatgatgtctattttcaaagagattgagaaggc 2717

                                                                        
Query: 65   agcttttcttgttcaagaagattataagaagacccaggagatgattgacacccataaaga 124
            |||||||  ||||||||||||||||||||| || ||  ||||||| |||| |||||||||
Sbjct: 2718 agcttttactgttcaagaagattataagaaaacacaacagatgatggacaaccataaaga 2777

                                
Query: 125  ggagcttgacaagacaaagg 144
             ||||||||||| |||||||
Sbjct: 2778 tgagcttgacaaaacaaagg 2797
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>gb|AC108523.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_C04,
             complete sequence
          Length = 96328

 Score =  107 bits (54), Expect = 4e-20
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                         
Query: 5     ggaaaatcttcttgctcaaaaggagaagttgatgtctgtttttaaagagattgagaagaa 64
             |||||| ||||||||| ||||||||||| |||||||| |||| |||||||||||||||  
Sbjct: 44459 ggaaaagcttcttgctgaaaaggagaagatgatgtctattttcaaagagattgagaaggc 44518

                                           
Query: 65    agcttttcttgttcaagaagattataagaa 94
             |||||||  |||||||||||||||||||||
Sbjct: 44519 agcttttactgttcaagaagattataagaa 44548



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 103   agatgattgacacccataaagaggagcttgacaagacaaagg 144
             ||||||| |||| ||||||||| ||||||||||| |||||||
Sbjct: 44647 agatgatggacaaccataaagatgagcttgacaaaacaaagg 44688
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  107 bits (54), Expect = 4e-20
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                            
Query: 5        ggaaaatcttcttgctcaaaaggagaagttgatgtctgtttttaaagagattgagaagaa 64
                |||||| ||||||||| ||||||||||| |||||||| |||| |||||||||||||||  
Sbjct: 24278723 ggaaaagcttcttgctgaaaaggagaagatgatgtctattttcaaagagattgagaaggc 24278782

                                              
Query: 65       agcttttcttgttcaagaagattataagaa 94
                |||||||  |||||||||||||||||||||
Sbjct: 24278783 agcttttactgttcaagaagattataagaa 24278812



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 103      agatgattgacacccataaagaggagcttgacaagacaaagg 144
                ||||||| |||| ||||||||| ||||||||||| |||||||
Sbjct: 24278911 agatgatggacaaccataaagatgagcttgacaaaacaaagg 24278952
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>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0066E19, complete sequence
          Length = 145575

 Score =  101 bits (51), Expect = 3e-18
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                         
Query: 423   ggtttattgagggcaatttcgatacatatgtctctcagattaggaagccacatgtgtggg 482
             ||||| |||||||  | |||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 36737 ggtttgttgagggggacttcgatgcatatgtctctcggattaggaagccacatgtgtggg 36796

                                                    
Query: 483   gaggagagccagaattgctcatggcttctcatgttcttc 521
             |||| || |||||| || | |||||||| ||||||||||
Sbjct: 36797 gaggtgaaccagaactgttaatggcttcgcatgttcttc 36835



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 389   gatgagtttatcaagagacggacagagactgaatggtt 426
             ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 36606 gatgaatttatcaagagacgggcagagactgaatggtt 36643



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 260   ggcattcctggggacggtagatgcttgtttcgttctgtggctcatggtgagtgcattagg 319
             ||||||||||| || || || |||||||| || ||||||||||||||||  || ||||||
Sbjct: 36342 ggcattcctggagatggaaggtgcttgttccgatctgtggctcatggtgcatgtattagg 36401

                  
Query: 320   tcagg 324
             |||||
Sbjct: 36402 tcagg 36406



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 209   tccactagttgtgctcatgggaagaaagtttacacagagtattctgtcactgg 261
             |||||||||| |||||||||||| ||||||| ||| || |||||||| |||||
Sbjct: 36190 tccactagttatgctcatgggaaaaaagtttgcacggattattctgttactgg 36242



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 563   ggtttgatagcgatcgcagagtatggccaggagtacgggaaggaaga 609
             ||||| ||||| || ||||| ||||| |||||||||||||| |||||
Sbjct: 37321 ggtttaatagcaattgcagaatatggtcaggagtacgggaaagaaga 37367
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  101 bits (51), Expect = 3e-18
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                            
Query: 423      ggtttattgagggcaatttcgatacatatgtctctcagattaggaagccacatgtgtggg 482
                ||||| |||||||  | |||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 18638861 ggtttgttgagggggacttcgatgcatatgtctctcggattaggaagccacatgtgtggg 18638920

                                                       
Query: 483      gaggagagccagaattgctcatggcttctcatgttcttc 521
                |||| || |||||| || | |||||||| ||||||||||
Sbjct: 18638921 gaggtgaaccagaactgttaatggcttcgcatgttcttc 18638959



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 389      gatgagtttatcaagagacggacagagactgaatggtt 426
                ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 18638730 gatgaatttatcaagagacgggcagagactgaatggtt 18638767



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                            
Query: 260      ggcattcctggggacggtagatgcttgtttcgttctgtggctcatggtgagtgcattagg 319
                ||||||||||| || || || |||||||| || ||||||||||||||||  || ||||||
Sbjct: 18638466 ggcattcctggagatggaaggtgcttgttccgatctgtggctcatggtgcatgtattagg 18638525

                     
Query: 320      tcagg 324
                |||||
Sbjct: 18638526 tcagg 18638530



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 209      tccactagttgtgctcatgggaagaaagtttacacagagtattctgtcactgg 261
                |||||||||| |||||||||||| ||||||| ||| || |||||||| |||||
Sbjct: 18638314 tccactagttatgctcatgggaaaaaagtttgcacggattattctgttactgg 18638366



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 563      ggtttgatagcgatcgcagagtatggccaggagtacgggaaggaaga 609
                ||||| ||||| || ||||| ||||| |||||||||||||| |||||
Sbjct: 18639445 ggtttaatagcaattgcagaatatggtcaggagtacgggaaagaaga 18639491
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                            
Query: 423      ggtttattgagggcaatttcgatacatatgtctctcagattaggaagccacatgtgtggg 482
                |||||||||||||  ||||||| |||||||| || || |||||| | |||||||||||||
Sbjct: 25017903 ggtttattgagggagatttcgacacatatgtgtcccatattaggcatccacatgtgtggg 25017962

                                                      
Query: 483      gaggagagccagaattgctcatggcttctcatgttctt 520
                | || || ||||||||  |||||||||| |||||||||
Sbjct: 25017963 gcggtgaaccagaattattcatggcttcacatgttctt 25018000



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Plus

                                                                            
Query: 263      attcctggggacggtagatgcttgtttcgttctgtggctcatggtgagtgcattaggtca 322
                |||||||| || || |||||||| || || ||||||  |||||| |  ||||||||| ||
Sbjct: 25017553 attcctggagatggaagatgcttattccgctctgtgattcatggggcatgcattagggca 25017612

                                                            
Query: 323      gggaaacccatacctaatgagaatcttcagagaaagctcgctga 366
                || | ||||||||| |||||  |||||||||||||||| |||||
Sbjct: 25017613 ggaagacccataccaaatgaagatcttcagagaaagctagctga 25017656
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>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0025J22
          Length = 175355

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                         
Query: 423   ggtttattgagggcaatttcgatacatatgtctctcagattaggaagccacatgtgtggg 482
             |||||||||||||  ||||||| |||||||| || || |||||| | |||||||||||||
Sbjct: 74019 ggtttattgagggagatttcgacacatatgtgtcccatattaggcatccacatgtgtggg 74078

                                                   
Query: 483   gaggagagccagaattgctcatggcttctcatgttctt 520
             | || || ||||||||  |||||||||| |||||||||
Sbjct: 74079 gcggtgaaccagaattattcatggcttcacatgttctt 74116



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Plus

                                                                         
Query: 263   attcctggggacggtagatgcttgtttcgttctgtggctcatggtgagtgcattaggtca 322
             |||||||| || || |||||||| || || ||||||  |||||| |  ||||||||| ||
Sbjct: 73669 attcctggagatggaagatgcttattccgctctgtgattcatggggcatgcattagggca 73728

                                                         
Query: 323   gggaaacccatacctaatgagaatcttcagagaaagctcgctga 366
             || | ||||||||| |||||  |||||||||||||||| |||||
Sbjct: 73729 ggaagacccataccaaatgaagatcttcagagaaagctagctga 73772
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>dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1134_H03
          Length = 135914

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                          
Query: 423    ggtttattgagggcaatttcgatacatatgtctctcagattaggaagccacatgtgtggg 482
              |||||||||||||  ||||||| |||||||| || || |||||| | |||||||||||||
Sbjct: 119618 ggtttattgagggagatttcgacacatatgtgtcccatattaggcatccacatgtgtggg 119677

                                                    
Query: 483    gaggagagccagaattgctcatggcttctcatgttctt 520
              | || || ||||||||  |||||||||| |||||||||
Sbjct: 119678 gcggtgaaccagaattattcatggcttcacatgttctt 119715



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Plus

                                                                          
Query: 263    attcctggggacggtagatgcttgtttcgttctgtggctcatggtgagtgcattaggtca 322
              |||||||| || || |||||||| || || ||||||  |||||| |  ||||||||| ||
Sbjct: 119268 attcctggagatggaagatgcttattccgctctgtgattcatggggcatgcattagggca 119327

                                                          
Query: 323    gggaaacccatacctaatgagaatcttcagagaaagctcgctga 366
              || | ||||||||| |||||  |||||||||||||||| |||||
Sbjct: 119328 ggaagacccataccaaatgaagatcttcagagaaagctagctga 119371
to top
>dbj|AB252068.1| Oryza sativa (indica cultivar-group) DNA, SCAR marker SCAR1088 in
           chromosome 9
          Length = 733

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 389 gatgagtttatcaagagacggacagagactgaatggtt 426
           ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 148 gatgaatttatcaagagacgggcagagactgaatggtt 111



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 209 tccactagttgtgctcatgggaagaaagtttacacagagtattctgtcactgg 261
           |||||||||| |||||||||||| ||||||| ||| || |||||||| |||||
Sbjct: 564 tccactagttatgctcatgggaaaaaagtttgcacggattattctgttactgg 512



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 260 ggcattcctggggacggtagatgcttgtttcgttctgtggctcatggtgagtgcattagg 319
           ||||||||||| || || || |||||||| || ||||||||||||||||  || ||||||
Sbjct: 412 ggcattcctggagatggaaggtgcttgttccgatctgtggctcatggtgcatgtattagg 353

                
Query: 320 tcagg 324
           |||||
Sbjct: 352 tcagg 348
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>dbj|AK120577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135D06, full
           insert sequence
          Length = 754

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 458 cagattaggaagccacatgtgtggggaggagagccagaattgctcatggcttctcatgtt 517
           ||||| || ||||| ||||| ||||||||||| || ||| ||||||||   || ||||||
Sbjct: 340 cagataagaaagcctcatgtttggggaggagaacctgaactgctcatgtgctcccatgtt 399

                                  
Query: 518 cttcagatgccgatcactgttta 540
           |||  |||||| |||||||||||
Sbjct: 400 cttaggatgcctatcactgttta 422
to top
>ref|NM_180385.1| Arabidopsis thaliana cysteine-type peptidase AT3G57810 transcript
           variant AT3G57810.2 mRNA, complete cds
          Length = 1287

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                       
Query: 470 ccacatgtgtggggaggagagccagaattgctcatggcttctcatgttcttcagatgccg 529
           ||||| ||||||||||| || || ||| |  |||||||||| || ||||| |||||||| 
Sbjct: 918 ccacacgtgtggggaggtgaacctgaactcttcatggcttcacacgttctccagatgcca 977

                          
Query: 530 atcactgtttatatg 544
           ||||| || ||||||
Sbjct: 978 atcacagtgtatatg 992



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                       
Query: 225 atgggaagaaagtttacacagagtattctgtcactggcattcctggggacggtagatgct 284
           ||||||| | |||||| || || || ||| ||| ||| ||||| ||||| || ||||| |
Sbjct: 673 atgggaaaagagtttatactgattactctatcattggtattccgggggatggcagatgtt 732

                              
Query: 285 tgtttcgttctgtggctca 303
           ||||||||||||| |||||
Sbjct: 733 tgtttcgttctgtagctca 751
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>ref|NM_115643.2| Arabidopsis thaliana cysteine-type peptidase AT3G57810 transcript
           variant AT3G57810.1 mRNA, complete cds
          Length = 1187

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                       
Query: 470 ccacatgtgtggggaggagagccagaattgctcatggcttctcatgttcttcagatgccg 529
           ||||| ||||||||||| || || ||| |  |||||||||| || ||||| |||||||| 
Sbjct: 818 ccacacgtgtggggaggtgaacctgaactcttcatggcttcacacgttctccagatgcca 877

                          
Query: 530 atcactgtttatatg 544
           ||||| || ||||||
Sbjct: 878 atcacagtgtatatg 892



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                       
Query: 225 atgggaagaaagtttacacagagtattctgtcactggcattcctggggacggtagatgct 284
           ||||||| | |||||| || || || ||| ||| ||| ||||| ||||| || ||||| |
Sbjct: 573 atgggaaaagagtttatactgattactctatcattggtattccgggggatggcagatgtt 632

                              
Query: 285 tgtttcgttctgtggctca 303
           ||||||||||||| |||||
Sbjct: 633 tgtttcgttctgtagctca 651
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>emb|BX824976.1|CNS0A5MJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH86ZH09 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1380

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                        
Query: 470  ccacatgtgtggggaggagagccagaattgctcatggcttctcatgttcttcagatgccg 529
            ||||| ||||||||||| || || ||| |  |||||||||| || ||||| |||||||| 
Sbjct: 1054 ccacacgtgtggggaggtgaacctgaactcttcatggcttcacacgttctccagatgcca 1113

                           
Query: 530  atcactgtttatatg 544
            ||||| || ||||||
Sbjct: 1114 atcacagtgtatatg 1128
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>gb|AY086909.1| Arabidopsis thaliana clone 29384 mRNA, complete sequence
          Length = 1282

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                       
Query: 470 ccacatgtgtggggaggagagccagaattgctcatggcttctcatgttcttcagatgccg 529
           ||||| ||||||||||| || || ||| |  |||||||||| || ||||| |||||||| 
Sbjct: 918 ccacacgtgtggggaggtgaacctgaactcttcatggcttcacacgttctccagatgcca 977

                          
Query: 530 atcactgtttatatg 544
           ||||| || ||||||
Sbjct: 978 atcacagtgtatatg 992



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                       
Query: 225 atgggaagaaagtttacacagagtattctgtcactggcattcctggggacggtagatgct 284
           ||||||| | |||||| || || || ||| ||| ||| ||||| ||||| || ||||| |
Sbjct: 673 atgggaaaagagtttatactgattactctatcattggtattccgggggatggcagatgtt 732

                              
Query: 285 tgtttcgttctgtggctca 303
           ||||||||||||| |||||
Sbjct: 733 tgtttcgttctgtagctca 751
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>dbj|AK176705.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-24-L06
          Length = 1327

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                       
Query: 225 atgggaagaaagtttacacagagtattctgtcactggcattcctggggacggtagatgct 284
           ||||||| | |||||| || || || ||| ||| ||| ||||| ||||| || ||||| |
Sbjct: 703 atgggaaaagagtttatactgattactctatcattggtattccgggggatggcagatgtt 762

                              
Query: 285 tgtttcgttctgtggctca 303
           ||||||||||||| |||||
Sbjct: 763 tgtttcgttctgtagctca 781
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>dbj|AK175291.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-73-A21
          Length = 1193

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                       
Query: 470 ccacatgtgtggggaggagagccagaattgctcatggcttctcatgttcttcagatgccg 529
           ||||| ||||||||||| || || ||| |  |||||||||| || ||||| |||||||| 
Sbjct: 819 ccacacgtgtggggaggtgaacctgaactcttcatggcttcacacgttctccagatgcca 878

                          
Query: 530 atcactgtttatatg 544
           ||||| || ||||||
Sbjct: 879 atcacagtgtatatg 893



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                       
Query: 225 atgggaagaaagtttacacagagtattctgtcactggcattcctggggacggtagatgct 284
           ||||||| | |||||| || || || ||| ||| ||| ||||| ||||| || ||||| |
Sbjct: 574 atgggaaaagagtttatactgattactctatcattggtattccgggggatggcagatgtt 633

                              
Query: 285 tgtttcgttctgtggctca 303
           ||||||||||||| |||||
Sbjct: 634 tgtttcgttctgtagctca 652
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>dbj|AK175225.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-65-D23
          Length = 1327

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                       
Query: 225 atgggaagaaagtttacacagagtattctgtcactggcattcctggggacggtagatgct 284
           ||||||| | |||||| || || || ||| ||| ||| ||||| ||||| || ||||| |
Sbjct: 703 atgggaaaagagtttatactgattactctatcattggtattccgggggatggcagatgtt 762

                              
Query: 285 tgtttcgttctgtggctca 303
           ||||||||||||| |||||
Sbjct: 763 tgtttcgttctgtagctca 781
to top
>gb|AC122544.1| Genomic sequence for Lycopersicon esculentum, clone L136C6, complete
              sequence
          Length = 121637

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 5      ggaaaatcttcttgctcaaaaggagaagtt 34
              |||||||||||||||| | |||||||||||
Sbjct: 105956 ggaaaatcttcttgctgagaaggagaagtt 105985
to top
>gb|AC131776.5| Mus musculus BAC clone RP24-318B19 from chromosome 16, complete sequence
          Length = 181574

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 152    taataaaacaaagaaagtggctctta 177
              ||||| ||||||||||||||||||||
Sbjct: 162965 taatataacaaagaaagtggctctta 162940
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>gb|U11310.1|HSSCPXT13 Homo sapiens sterol carrier protein-X/sterol carrier protein-2
           (SCP-X/SCP-2) gene, exon 13
          Length = 153

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 95  tgtttttaaggagattgagaagaaa 119
to top
>gb|BC005911.1| Homo sapiens sterol carrier protein 2, transcript variant 3, mRNA
           (cDNA clone IMAGE:4287946), complete cds
          Length = 1439

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 166 tgtttttaaggagattgagaagaaa 190
to top
>ref|NM_001007250.1| Homo sapiens sterol carrier protein 2 (SCP2), transcript variant 5,
           mRNA
          Length = 1317

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 176 tgtttttaaggagattgagaagaaa 200
to top
>ref|NM_002979.3| Homo sapiens sterol carrier protein 2 (SCP2), transcript variant 1,
            mRNA
          Length = 2697

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 41   tgtttttaaagagattgagaagaaa 65
            ||||||||| |||||||||||||||
Sbjct: 1426 tgtttttaaggagattgagaagaaa 1450
to top
>ref|NM_001007099.1| Homo sapiens sterol carrier protein 2 (SCP2), transcript variant 3,
           mRNA
          Length = 1447

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 176 tgtttttaaggagattgagaagaaa 200
to top
>ref|NM_001007100.1| Homo sapiens sterol carrier protein 2 (SCP2), transcript variant 4,
           mRNA
          Length = 1438

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 167 tgtttttaaggagattgagaagaaa 191
to top
>ref|XM_513413.1| PREDICTED: Pan troglodytes similar to sterol carrier protein 2
            (LOC456862), mRNA
          Length = 2467

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 41   tgtttttaaagagattgagaagaaa 65
            ||||||||| |||||||||||||||
Sbjct: 2128 tgtttttaaggagattgagaagaaa 2152
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>gb|AC111143.10| Mus musculus chromosome 3, clone RP23-372C7, complete sequence
          Length = 147125

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 259   tggcattcctggggacggtag 279
             |||||||||||||||||||||
Sbjct: 53844 tggcattcctggggacggtag 53824
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>emb|AL445183.19| Human DNA sequence from clone RP11-334A14 on chromosome 1 Contains the
             5' end of the SCP2 gene for sterol carrier protein 2, a
             pseudogene similar to part of related RAS viral (r-ras)
             oncogene homolog 2 (RRAS2), a beta polypeptide tubulin
             family pseudogene, the PODN gene for podocan, a likely
             ortholog of mouse hypoxia induced gene 1 (HIG1)
             pseudogene, two novel genes, the SLC1A7 gene for solute
             carrier family 1 (glutamate transporter) member 7 and a
             CpG island, complete sequence
          Length = 193774

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 41    tgtttttaaagagattgagaagaaa 65
             ||||||||| |||||||||||||||
Sbjct: 74652 tgtttttaaggagattgagaagaaa 74676
to top
>emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, BAC clone T10K17
          Length = 109016

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 263   attcctggggacggtagatgcttgtttcgttctgtggctca 303
             ||||| ||||| || ||||| |||||||||||||| |||||
Sbjct: 12011 attccgggggatggcagatgtttgtttcgttctgtagctca 12051
to top
>emb|CR859768.1| Pongo pygmaeus mRNA; cDNA DKFZp469L1126 (from clone DKFZp469L1126)
          Length = 2703

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 41   tgtttttaaagagattgagaagaaa 65
            ||||||||| |||||||||||||||
Sbjct: 1433 tgtttttaaggagattgagaagaaa 1457
to top
>gb|AC078784.24| Homo sapiens 3 BAC RP11-63L4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 165413

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    ttttaaagagattgagaagaa 64
             |||||||||||||||||||||
Sbjct: 19263 ttttaaagagattgagaagaa 19283
to top
>emb|CR620432.1| full-length cDNA clone CS0DK001YL01 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1364

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 146 tgtttttaaggagattgagaagaaa 170
to top
>emb|CR618704.1| full-length cDNA clone CS0DI010YI02 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1180

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 147 tgtttttaaggagattgagaagaaa 171
to top
>emb|CR612478.1| full-length cDNA clone CS0DI085YJ15 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1358

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 146 tgtttttaaggagattgagaagaaa 170
to top
>emb|CR595480.1| full-length cDNA clone CS0DB005YI21 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 1385

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 158 tgtttttaaggagattgagaagaaa 182
to top
>emb|CR594806.1| full-length cDNA clone CS0DI022YF01 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1373

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 128 tgtttttaaggagattgagaagaaa 152
to top
>gb|AC090744.5| Homo sapiens chromosome 11, clone RP11-660K15, complete sequence
          Length = 195434

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 508   ttctcatgttcttcagatgcc 528
             |||||||||||||||||||||
Sbjct: 98320 ttctcatgttcttcagatgcc 98300
to top
>gb|S52450.1| sterol carrier protein 2 [human, liver, mRNA, 1229 nt]
          Length = 1229

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 176 tgtttttaaggagattgagaagaaa 200
to top
>gb|AC068329.8| Homo sapiens chromosome 11, clone RP11-82N10, complete sequence
          Length = 185347

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 508   ttctcatgttcttcagatgcc 528
             |||||||||||||||||||||
Sbjct: 33943 ttctcatgttcttcagatgcc 33963
to top
>gb|DQ000515.1| Synthetic construct clone PSF:103990 sterol carrier protein-2 gene,
           complete cds
          Length = 504

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 165 tgtttttaaggagattgagaagaaa 189
to top
>emb|BX537619.1|HSM806391 Homo sapiens mRNA; cDNA DKFZp686D11188 (from clone DKFZp686D11188)
          Length = 3953

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 141 tgtttttaaggagattgagaagaaa 165
to top
>emb|BX537618.1|HSM806390 Homo sapiens mRNA; cDNA DKFZp686C12188 (from clone DKFZp686C12188)
          Length = 3953

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 141 tgtttttaaggagattgagaagaaa 165
to top
>dbj|AB208789.1| Homo sapiens mRNA for sterol carrier protein X isoform 1 proprotein
            variant protein
          Length = 5204

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 41   tgtttttaaagagattgagaagaaa 65
            ||||||||| |||||||||||||||
Sbjct: 4168 tgtttttaaggagattgagaagaaa 4192
to top
>emb|AL805906.7| Mouse DNA sequence from clone RP23-113J20 on chromosome 4, complete
              sequence
          Length = 176416

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 284    ttgtttcgttctgtggctcat 304
              |||||||||||||||||||||
Sbjct: 163849 ttgtttcgttctgtggctcat 163869
to top
>gb|M55421.1|HUMSTEAA Human sterol carrier protein-2 (SCP-2) mRNA, complete cds
          Length = 1219

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 176 tgtttttaaggagattgagaagaaa 200
to top
>gb|M75884.1|HUMSCP2B Human sterol carrier protein 2 mRNA, complete cds
          Length = 1500

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 41  tgtttttaaagagattgagaagaaa 65
           ||||||||| |||||||||||||||
Sbjct: 612 tgtttttaaggagattgagaagaaa 636
to top
>gb|M75883.1|HUMSCP2A Human sterol carrier protein X/sterol carrier protein 2 mRNA,
            complete cds
          Length = 2572

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 41   tgtttttaaagagattgagaagaaa 65
            ||||||||| |||||||||||||||
Sbjct: 1326 tgtttttaaggagattgagaagaaa 1350
to top
>gb|BC004658.1| Mus musculus chloride intracellular channel 1, mRNA (cDNA clone
           MGC:6371 IMAGE:3498118), complete cds
          Length = 1178

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 caagagacggacagagactg 419
           ||||||||||||||||||||
Sbjct: 349 caagagacggacagagactg 368
to top
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0052H02, complete sequence
          Length = 159632

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   tataataaaacaaagaaagt 169
             ||||||||||||||||||||
Sbjct: 63550 tataataaaacaaagaaagt 63531
to top
>gb|AC107316.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-258F1, complete
            sequence
          Length = 118461

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 152  taataaaacaaagaaagtggctct 175
            ||||| ||||||||||||||||||
Sbjct: 5247 taatataacaaagaaagtggctct 5270
to top
>gb|AC144933.4| Mus musculus BAC clone RP24-531B24 from chromosome 8, complete sequence
          Length = 169667

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 512   catgttcttcagatgccgat 531
             ||||||||||||||||||||
Sbjct: 60965 catgttcttcagatgccgat 60946
to top
>ref|NM_033444.1| Mus musculus chloride intracellular channel 1 (Clic1), mRNA
          Length = 1178

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 caagagacggacagagactg 419
           ||||||||||||||||||||
Sbjct: 349 caagagacggacagagactg 368
to top
>gb|AC134826.4| Mus musculus BAC clone RP24-459P6 from chromosome 13, complete sequence
          Length = 168202

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 152   taataaaacaaagaaagtggctct 175
             ||||| ||||||||||||||||||
Sbjct: 98040 taatataacaaagaaagtggctct 98063
to top
>gb|AC125190.4| Mus musculus BAC clone RP23-288O24 from chromosome 13, complete sequence
          Length = 152080

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 152    taataaaacaaagaaagtggctct 175
              ||||| ||||||||||||||||||
Sbjct: 145040 taatataacaaagaaagtggctct 145017
to top
>gb|AC115948.12| Mus musculus chromosome 16, clone RP24-568J12, complete sequence
          Length = 212604

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 145    aagactataataaaacaaagaaag 168
              ||||||||||||||| ||||||||
Sbjct: 184895 aagactataataaaataaagaaag 184918
to top
>gb|AC117224.3| Mus musculus BAC clone RP23-356N8 from chromosome 16, complete sequence
          Length = 197831

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 145    aagactataataaaacaaagaaag 168
              ||||||||||||||| ||||||||
Sbjct: 144789 aagactataataaaataaagaaag 144766
to top
>gb|AC116597.3| Mus musculus BAC clone RP24-409C23 from chromosome 18, complete sequence
          Length = 198519

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 43     tttttaaagagattgagaagaaag 66
              ||||||||||||| ||||||||||
Sbjct: 100205 tttttaaagagatagagaagaaag 100182
to top
>gb|AC102441.6| Mus musculus chromosome 18, clone RP24-160I12, complete sequence
          Length = 224556

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      aatcttcttgctcaaaagga 28
              ||||||||||||||||||||
Sbjct: 139327 aatcttcttgctcaaaagga 139308
to top
>gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete sequence
          Length = 129327

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   gaaagctcgctgatgattta 373
             ||||||||||||||||||||
Sbjct: 37360 gaaagctcgctgatgattta 37341
to top
>emb|BX530072.8| Human DNA sequence from clone WI2-85925A9 on chromosome X Contains part
             of the MAOA gene for monoamine oxidase A, complete
             sequence
          Length = 38956

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   tggctcttagttcatccacc 188
             ||||||||||||||||||||
Sbjct: 30246 tggctcttagttcatccacc 30227
to top
>emb|AL359847.24| Human DNA sequence from clone RP11-41D21 on chromosome 10, complete
             sequence
          Length = 107909

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    ttgatgtctgtttttaaaga 52
             ||||||||||||||||||||
Sbjct: 22671 ttgatgtctgtttttaaaga 22690
to top
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence
          Length = 651701

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 130    ttgacaagacaaaggaagac 149
              ||||||||||||||||||||
Sbjct: 330632 ttgacaagacaaaggaagac 330613
to top
>emb|BX294164.13| Zebrafish DNA sequence from clone CH211-266D19 in linkage group 24,
              complete sequence
          Length = 177516

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 142    aggaagactataataaaacaaaga 165
              |||||||||||||| |||||||||
Sbjct: 161614 aggaagactataatgaaacaaaga 161591
to top
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1065G12
          Length = 165006

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 458   cagattaggaagccacatgtgtggggaggagagccagaattgctcatg 505
             ||||| || ||||| ||||| ||||||||||| || ||| ||||||||
Sbjct: 12277 cagataagaaagcctcatgtttggggaggagaacctgaactgctcatg 12230
to top
>gb|AC148346.12| Medicago truncatula clone mth2-25m19, complete sequence
          Length = 122590

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   acattgattccaaaacatcc 211
             ||||||||||||||||||||
Sbjct: 15616 acattgattccaaaacatcc 15635
to top
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 380     ttggttgctgatgagtttatcaag 403
               ||||||||||||||||| ||||||
Sbjct: 1370136 ttggttgctgatgagttgatcaag 1370159
to top
>gb|AC073369.5| Homo sapiens chromosome 10 clone RP11-466H6, complete sequence
          Length = 194855

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     ttgatgtctgtttttaaaga 52
              ||||||||||||||||||||
Sbjct: 137531 ttgatgtctgtttttaaaga 137550
to top
>dbj|AK150611.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830012L18 product:chloride
           intracellular channel 1, full insert sequence
          Length = 1149

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 caagagacggacagagactg 419
           ||||||||||||||||||||
Sbjct: 338 caagagacggacagagactg 357
to top
>dbj|AK153509.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830168O20 product:chloride
           intracellular channel 1, full insert sequence
          Length = 1438

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 caagagacggacagagactg 419
           ||||||||||||||||||||
Sbjct: 627 caagagacggacagagactg 646
to top
>dbj|AK150382.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830006C20 product:chloride
           intracellular channel 1, full insert sequence
          Length = 1438

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 caagagacggacagagactg 419
           ||||||||||||||||||||
Sbjct: 627 caagagacggacagagactg 646
to top
>dbj|AK167765.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library,
           clone:I730010F14 product:chloride intracellular channel
           1, full insert sequence
          Length = 1166

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 caagagacggacagagactg 419
           ||||||||||||||||||||
Sbjct: 355 caagagacggacagagactg 374
to top
>dbj|AK168262.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched
           library, clone:I730073N12 product:chloride intracellular
           channel 1, full insert sequence
          Length = 980

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 caagagacggacagagactg 419
           ||||||||||||||||||||
Sbjct: 169 caagagacggacagagactg 188
to top
>dbj|AK088809.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430026H17
           product:CHLORIDE INTRACELLULAR CHANNEL PROTEIN 1
           (NUCLEAR CHLORIDE ION CHANNEL 27) (NCC27) (P64 CLCP)
           (CHLORIDE CHANNEL ABP) homolog [Homo sapiens], full
           insert sequence
          Length = 971

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 caagagacggacagagactg 419
           ||||||||||||||||||||
Sbjct: 160 caagagacggacagagactg 179
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 150     tataataaaacaaagaaagt 169
               ||||||||||||||||||||
Sbjct: 2783743 tataataaaacaaagaaagt 2783724
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                                
Query: 458      cagattaggaagccacatgtgtggggaggagagccagaattgctcatg 505
                ||||| || ||||| ||||| ||||||||||| || ||| ||||||||
Sbjct: 39210571 cagataagaaagcctcatgtttggggaggagaacctgaactgctcatg 39210524
to top
>gb|AC102163.14| Mus musculus chromosome 1, clone RP23-431N20, complete sequence
          Length = 218665

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    actataataaaacaaagaaa 167
              ||||||||||||||||||||
Sbjct: 160572 actataataaaacaaagaaa 160591
to top
>gb|AC009410.3| Homo sapiens BAC clone RP11-335M11 from 2, complete sequence
          Length = 189812

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    ttgatgtctgtttttaaaga 52
             ||||||||||||||||||||
Sbjct: 79572 ttgatgtctgtttttaaaga 79591
to top
>gb|AC068539.8| Homo sapiens BAC clone RP11-145M22 from 2, complete sequence
          Length = 80775

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    aagaagattataagaagacc 98
             ||||||||||||||||||||
Sbjct: 69663 aagaagattataagaagacc 69644
to top
>dbj|AP003313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0035F12
          Length = 153439

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 458   cagattaggaagccacatgtgtggggaggagagccagaattgctcatg 505
             ||||| || ||||| ||||| ||||||||||| || ||| ||||||||
Sbjct: 86331 cagataagaaagcctcatgtttggggaggagaacctgaactgctcatg 86284
to top
>emb|AL670413.19| Mouse DNA sequence from clone RP23-298E4 on chromosome 4, complete
              sequence
          Length = 243792

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     ttgatgtctgtttttaaaga 52
              ||||||||||||||||||||
Sbjct: 173611 ttgatgtctgtttttaaaga 173592
to top
>emb|AL807802.22| Mouse DNA sequence from clone RP23-351B24 on chromosome 4, complete
              sequence
          Length = 186857

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 152    taataaaacaaagaaagtggctct 175
              ||||| ||||||||||||||||||
Sbjct: 184580 taatataacaaagaaagtggctct 184603
to top
>gb|AC149294.8| Mus musculus chromosome 15, clone RP24-389G21, complete sequence
          Length = 136530

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 152  taataaaacaaagaaagtggctct 175
            ||||| ||||||||||||||||||
Sbjct: 2193 taatataacaaagaaagtggctct 2216
to top
>gb|AC116555.23| Mus musculus strain C57BL/6J clone rp23-160b14 map 8, complete
            sequence
          Length = 209784

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   atgtctgtttttaaagagat 55
            ||||||||||||||||||||
Sbjct: 8444 atgtctgtttttaaagagat 8425
to top
>gb|AC162949.7| Mus musculus BAC clone RP23-8D10 from chromosome 8, complete sequence
          Length = 228830

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    atgtctgtttttaaagagat 55
             ||||||||||||||||||||
Sbjct: 80721 atgtctgtttttaaagagat 80702
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 150     tataataaaacaaagaaagt 169
               ||||||||||||||||||||
Sbjct: 2792774 tataataaaacaaagaaagt 2792755
to top
>gb|AC149284.5| Mus musculus BAC clone RP23-136E9 from 18, complete sequence
          Length = 204223

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 43     tttttaaagagattgagaagaaag 66
              ||||||||||||| ||||||||||
Sbjct: 177197 tttttaaagagatagagaagaaag 177174
to top
>emb|AL020990.1|HS201D17 Human DNA sequence from clone RP1-201D17 on chromosome Xp11.4, complete
             sequence
          Length = 99342

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   tggctcttagttcatccacc 188
             ||||||||||||||||||||
Sbjct: 84860 tggctcttagttcatccacc 84841
to top
>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence
          Length = 179585

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    catgttcttcagatgccgat 531
              ||||||||||||||||||||
Sbjct: 179274 catgttcttcagatgccgat 179255
to top
>gb|AC166825.3| Mus musculus BAC clone RP23-368D12 from chromosome 6, complete sequence
          Length = 182232

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 152   taataaaacaaagaaagtggctct 175
             ||||| ||||||||||||||||||
Sbjct: 88080 taatataacaaagaaagtggctct 88057


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,745,388
Number of Sequences: 3902068
Number of extensions: 6745388
Number of successful extensions: 138751
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138269
Number of HSP's gapped (non-prelim): 481
length of query: 611
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 588
effective length of database: 17,143,297,704
effective search space: 10080259049952
effective search space used: 10080259049952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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