Clone Information

BLAST Search Result

Clone Name	bags22h12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related pr...	222	4e-58
2	DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related pr...	221	6e-58
3	DRP1E_ARATH (Q9FNX5) Dynamin-related protein 1E (Dynamin-like pr...	55	1e-07
4	DRP1D_ARATH (Q8S3C9) Dynamin-related protein 1D (Dynamin-like pr...	54	2e-07
5	DRP1C_ARATH (Q8LF21) Dynamin-related protein 1C (Dynamin-like pr...	54	3e-07
6	DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like pr...	51	1e-06
7	DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like pr...	49	1e-05
8	MYH11_RAT (Q63862) Myosin-11 (Myosin heavy chain, smooth muscle ...	39	0.008
9	DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like pr...	37	0.022
10	YB68_SCHPO (Q09748) Dynamin-like protein C12C2.08	37	0.022
11	MYH11_MOUSE (O08638) Myosin-11 (Myosin heavy chain, smooth muscl...	37	0.029
12	ZEO1_YEAST (Q08245) Protein ZEO1 (Zeocin resistance protein 1)	34	0.19
13	LAMA3_HUMAN (Q16787) Laminin alpha-3 chain precursor (Epiligrin ...	33	0.32
14	YCX7_CHLVU (O20159) Hypothetical 79.7 kDa protein in psaB-ycf62 ...	32	0.72
15	RHG25_HUMAN (P42331) Rho-GTPase-activating protein 25	32	0.72
16	TIG_HELPY (P56420) Trigger factor (TF)	31	2.1
17	GAL11_KLULA (P32257) Transcription regulatory protein GAL11	31	2.1
18	TIG_CAMJR (Q5HWX5) Trigger factor (TF)	30	2.7
19	TIG_CAMJE (Q46108) Trigger factor (TF)	30	2.7
20	ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tum...	30	2.7
21	RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-bindin...	30	2.7
22	PROB_SCHPO (O13810) Probable glutamate 5-kinase (EC 2.7.2.11) (G...	30	2.7
23	NIN_HUMAN (Q8N4C6) Ninein (hNinein)	30	2.7
24	SF3B2_HUMAN (Q13435) Splicing factor 3B subunit 2 (Spliceosome-a...	30	3.6
25	TAOK1_RAT (O88664) Serine/threonine-protein kinase TAO1 (EC 2.7....	30	3.6
26	TAOK1_MOUSE (Q5F2E8) Serine/threonine-protein kinase TAO1 (EC 2....	30	3.6
27	TAOK1_HUMAN (Q7L7X3) Serine/threonine-protein kinase TAO1 (EC 2....	30	3.6
28	IF2_HELPY (P55972) Translation initiation factor IF-2	30	3.6
29	CLH_SCHPO (Q10161) Probable clathrin heavy chain	30	3.6
30	DNAK2_SYNP7 (P50021) Chaperone protein dnaK2 (Heat shock protein...	30	4.7
31	TENS1_HUMAN (Q9HBL0) Tensin-1	30	4.7
32	ATR_XENLA (Q9DE14) Serine/threonine-protein kinase atr (EC 2.7.1...	30	4.7
33	NARQ_ECOLI (P27896) Nitrate/nitrite sensor protein narQ (EC 2.7....	30	4.7
34	DNAK2_SYNP6 (Q5N1J4) Chaperone protein dnaK 2 (Heat shock protei...	29	6.1
35	DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)	29	6.1
36	YHCB_ECOLI (P0ADW3) Putative cytochrome d ubiquinol oxidase subu...	29	6.1
37	YHCB_ECOL6 (P0ADW4) Putative cytochrome d ubiquinol oxidase subu...	29	6.1
38	YHCB_ECO57 (P0ADW5) Putative cytochrome d ubiquinol oxidase subu...	29	6.1
39	EXOC4_CAEEL (Q9XWS2) Probable exocyst complex component 4 (Exocy...	29	6.1
40	TAO1B_XENLA (Q7ZYJ0) Serine/threonine-protein kinase TAO1-B (EC ...	29	6.1
41	VPS41_LYCES (P93231) Vacuolar assembly protein VPS41 homolog	29	6.1
42	RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-bindin...	29	6.1
43	CPXP_SHIFL (P0AE87) Periplasmic protein cpxP precursor	29	6.1
44	CPXP_ECOLI (P0AE85) Periplasmic protein cpxP precursor	29	6.1
45	CPXP_ECOL6 (P0AE86) Periplasmic protein cpxP precursor	29	6.1
46	MRP4_STRPY (P30141) Fibrinogen- and Ig-binding protein precursor...	29	6.1
47	FGD5_MOUSE (Q80UZ0) FYVE, RhoGEF and PH domain-containing protein 5	29	6.1
48	CCD46_HUMAN (Q8N8E3) Coiled-coil domain-containing protein 46	29	6.1
49	ATX3_CHICK (Q9W689) Ataxin-3 (EC 3.4.22.-) (Machado-Joseph disea...	29	6.1
50	LON_MYCGE (P47481) ATP-dependent protease La (EC 3.4.21.53)	29	7.9
51	ZN101_HUMAN (Q8IZC7) Zinc finger protein 101 (Zinc finger protei...	29	7.9
52	MYS3_HYDAT (P39922) Myosin heavy chain, clone 203 (Fragment)	29	7.9
53	TIG_CLOPE (Q8XKK0) Trigger factor (TF)	29	7.9
54	VP6_AHSV3 (Q64909) VP6 protein (Minor inner core protein VP6)	29	7.9

>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)|
            (Dynamin-like protein 6)
          Length = 914

 Score =  222 bits (566), Expect = 4e-58
 Identities = 115/165 (69%), Positives = 134/165 (81%), Gaps = 1/165 (0%)
 Frame = +2

Query: 8    DKVEWVNKIKAVIQSKGGSFKAANSEGGPLKQNQPDSSTDAMIRRPADPEEELRWMSQEV 187
            DK EW+NK++ VIQ++GG   + +     ++Q+  + S D M+R+P DPEEELRWMSQEV
Sbjct: 683  DKNEWINKLQKVIQARGGQVGSVS-----MRQSLSEGSLDKMVRKPIDPEEELRWMSQEV 737

Query: 188  RGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQEDHNAKRR 367
            RGYVEAVLNSLAANVPKA+VLCQVEKAKEDMLNQLYSSIS   N +IE L+QED N KRR
Sbjct: 738  RGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAIGNERIESLIQEDQNVKRR 797

Query: 368  REKYQKQSSLLSKLTRQLSIHDNR-AAASSYSNDSPEAESPRTPG 499
            RE+YQKQSSLLSKLTRQLSIHDNR AAASSYS++S    SPR  G
Sbjct: 798  RERYQKQSSLLSKLTRQLSIHDNRAAAASSYSDNSGTESSPRASG 842

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>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)|
            (Dynamin-like protein 3)
          Length = 920

 Score =  221 bits (564), Expect = 6e-58
 Identities = 114/165 (69%), Positives = 136/165 (82%), Gaps = 1/165 (0%)
 Frame = +2

Query: 8    DKVEWVNKIKAVIQSKGGSFKAANSEGGPLKQNQPDSSTDAMIRRPADPEEELRWMSQEV 187
            DK EW+NK++ VIQ++GG   +A+     ++Q+  + S D M+R+P DPEEELRWMSQEV
Sbjct: 690  DKNEWINKLQKVIQARGGQVGSAS-----MRQSLSEGSLDKMVRKPVDPEEELRWMSQEV 744

Query: 188  RGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQEDHNAKRR 367
            RGYVEAVLNSLAANVPKA+VLCQVEK+KEDMLNQLYSSIS   N +IE L+QED N KRR
Sbjct: 745  RGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSISAIGNERIESLIQEDQNVKRR 804

Query: 368  REKYQKQSSLLSKLTRQLSIHDNR-AAASSYSNDSPEAESPRTPG 499
            R++YQKQSSLLSKLTRQLSIHDNR AAASS+S++S    SPRT G
Sbjct: 805  RDRYQKQSSLLSKLTRQLSIHDNRAAAASSWSDNSGTESSPRTNG 849

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>DRP1E_ARATH (Q9FNX5) Dynamin-related protein 1E (Dynamin-like protein E)|
           (Dynamin-like protein 4) (Dynamin-like protein DLP2)
          Length = 624

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 35/102 (34%), Positives = 52/102 (50%)
 Frame = +2

Query: 101 QNQPDSSTDAMIRRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDM 280
           +NQ  S + A + +  D     R ++  V  YV  V ++L   +PKA V CQV +AK  +
Sbjct: 513 KNQTASPSSATLDQYGDGH--FRRIASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLAL 570

Query: 281 LNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSK 406
           LN  YS IS +   ++ +LL ED     RR +  K+  L  K
Sbjct: 571 LNYFYSQISKREGKQLGQLLDEDPALMDRRLECAKRLELYKK 612

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>DRP1D_ARATH (Q8S3C9) Dynamin-related protein 1D (Dynamin-like protein D)|
           (Dynamin-like protein DLP3)
          Length = 612

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 33/102 (32%), Positives = 51/102 (50%)
 Frame = +2

Query: 101 QNQPDSSTDAMIRRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDM 280
           QN   SS  + I +  D     R ++  V  Y++ V  +L   +PKA+V CQV +AK  +
Sbjct: 501 QNMSLSSPTSAIDQYGDGH--FRKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSL 558

Query: 281 LNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSK 406
           LN  Y+ IS     ++ +LL E+     RR +  K+  L  K
Sbjct: 559 LNYFYAQISQSQGKRLGQLLDENPALMERRMQCAKRLELYKK 600

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>DRP1C_ARATH (Q8LF21) Dynamin-related protein 1C (Dynamin-like protein C)|
           (Dynamin-like protein 5) (Dynamin-like protein DLP1)
          Length = 614

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
 Frame = +2

Query: 146 ADP--EEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSN 319
           ADP  +   R +   V  Y+  V ++L  ++PKA+V CQV +AK  +LN  Y+ +  +  
Sbjct: 515 ADPYSDNHFRKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEK 574

Query: 320 AKIEELLQEDHNAKRRREKYQKQSSL 397
            K+  +L ED     RR    K+  L
Sbjct: 575 EKLGAMLDEDPQLMERRGTLAKRLEL 600

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>DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like protein B)|
          Length = 610

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 26/78 (33%), Positives = 43/78 (55%)
 Frame = +2

Query: 164 LRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQ 343
           LR +   V  YV  V   L  ++PK+IV CQV +AK  +L+  ++ +  +  +K+ +LL 
Sbjct: 518 LRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLD 577

Query: 344 EDHNAKRRREKYQKQSSL 397
           ED   ++RR    K+  L
Sbjct: 578 EDPAVQQRRTSIAKRLEL 595

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>DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like protein A)|
           (Dynamin-like protein 1)
          Length = 610

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 25/78 (32%), Positives = 38/78 (48%)
 Frame = +2

Query: 164 LRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQ 343
           LR +   V  YV  V   L  ++PK+IV CQV +AK  +L+  ++ +      ++  LL 
Sbjct: 518 LRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMKRLSSLLN 577

Query: 344 EDHNAKRRREKYQKQSSL 397
           ED     RR    K+  L
Sbjct: 578 EDPAIMERRSAISKRLEL 595

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>MYH11_RAT (Q63862) Myosin-11 (Myosin heavy chain, smooth muscle isoform)|
            (SMMHC) (Fragments)
          Length = 1327

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 25/88 (28%), Positives = 47/88 (53%)
 Frame = +2

Query: 158  EELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEEL 337
            +ELR   QEV G V+A L S  A +   IV  + +  +E    Q  + +  Q + K++E+
Sbjct: 1150 KELRSKLQEVEGAVKAKLKSTVAALEAKIVQLEEQIEQEAREKQAATKLLKQKDKKLKEV 1209

Query: 338  LQEDHNAKRRREKYQKQSSLLSKLTRQL 421
            L +  + ++  E+Y++Q+   +   +QL
Sbjct: 1210 LLQVEDERKMVEQYKEQAEKGNTKVKQL 1237

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>DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like protein 2)|
            (Dynamin-like protein 2a)
          Length = 808

 Score = 37.4 bits (85), Expect = 0.022
 Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 14/117 (11%)
 Frame = +2

Query: 185  VRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQEDHNAKR 364
            +R Y + V  ++  +VPKAI+   V   K ++ N     +  ++    EE+LQE      
Sbjct: 677  LRSYYDIVRKNIEDSVPKAIMHFLVNHTKRELHNVFIKKLYREN--LFEEMLQEPDEIAV 734

Query: 365  RREKYQKQSSLLSKLTRQL--------------SIHDNRAAASSYSNDSPEAESPRT 493
            +R++ Q+   +L +  R L              S H     +S YS  S  + SP T
Sbjct: 735  KRKRTQETLHVLQQAYRTLDELPLEADSVSAGMSKHQELLTSSKYSTSSSYSASPST 791

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>YB68_SCHPO (Q09748) Dynamin-like protein C12C2.08|
          Length = 781

 Score = 37.4 bits (85), Expect = 0.022
 Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
 Frame = +2

Query: 56   GGSFKAANSEGGPLKQNQPDSSTDAMIRRPADPEEELR--WMSQEVRGYVEAVLNSLAAN 229
            GG     N+   PLK     +  + M        EE+    + + +  Y       +   
Sbjct: 658  GGDTNHKNNH--PLKMTDLSNEVETMALEDMSEREEVEVDLIKELITSYFNLTRKIIIDQ 715

Query: 230  VPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSKL 409
            VPK I+   V  +K+ + N+L S +  +     + LL ED N K  REK ++  S+ ++ 
Sbjct: 716  VPKVIMHLLVNASKDAIQNRLVSKLYREDF--FDTLLIEDENVKSEREKCERLLSVYNQA 773

Query: 410  TRQLS 424
             + +S
Sbjct: 774  NKIIS 778

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>MYH11_MOUSE (O08638) Myosin-11 (Myosin heavy chain, smooth muscle isoform)|
            (SMMHC)
          Length = 1972

 Score = 37.0 bits (84), Expect = 0.029
 Identities = 24/88 (27%), Positives = 45/88 (51%)
 Frame = +2

Query: 158  EELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEEL 337
            +ELR   QEV G V+A L S  A +   I   + +  +E    Q  +    Q + K++E+
Sbjct: 1795 KELRSKLQEVEGAVKAKLKSTVAALEAKIAQLEEQVEQEAREKQAATKSLKQKDKKLKEV 1854

Query: 338  LQEDHNAKRRREKYQKQSSLLSKLTRQL 421
            L +  + ++  E+Y++Q+   +   +QL
Sbjct: 1855 LLQVEDERKMAEQYKEQAEKGNTKVKQL 1882

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>ZEO1_YEAST (Q08245) Protein ZEO1 (Zeocin resistance protein 1)|
          Length = 112

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 25/109 (22%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
 Frame = +2

Query: 101 QNQPDSSTDAMIRRPADPEEELRWMSQEVRGYVEAVLNSLAAN-VPKAIVLCQVEKAKED 277
           QN+ +++   + ++  + +E L+   QEV+   EA +++L     P+A    QV+K +++
Sbjct: 4   QNKAETAAQDVQQKLEETKESLQNKGQEVKEQAEASIDNLKNEATPEAE---QVKKEEQN 60

Query: 278 MLNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSKLTRQLS 424
           + + +    +  +N K+EE  ++   A   +++ +K+   L KL R+++
Sbjct: 61  IADGVEQKKTEAAN-KVEETKKQASAAVSEKKETKKEGGFLKKLNRKIA 108

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>LAMA3_HUMAN (Q16787) Laminin alpha-3 chain precursor (Epiligrin 170 kDa|
           subunit) (E170) (Nicein alpha subunit)
          Length = 1713

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
 Frame = +2

Query: 161 ELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSN--AKIEE 334
           +L  M +++R  V++ L  L+A+      +  +E   +D+ NQL +  S  SN  +KIE 
Sbjct: 212 DLATMGEQLR-LVKSQLQGLSASAGLLEQMRHMETQAKDLRNQLLNYRSAISNHGSKIEG 270

Query: 335 LLQEDHNAKRRREKYQKQSSLLSKLTRQLSIHDNRAAASSYSND 466
           L +E  +  +  E  Q+++ + S+  + L+ + NRA  S+   D
Sbjct: 271 LERELTDLNQEFETLQEKAQVNSRKAQTLNNNVNRATQSAKELD 314

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>YCX7_CHLVU (O20159) Hypothetical 79.7 kDa protein in psaB-ycf62 intergenic|
           region (ORF695)
          Length = 695

 Score = 32.3 bits (72), Expect = 0.72
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
 Frame = +2

Query: 227 NVPKAIVLCQVEKAKEDMLNQLYSSISGQSN--AKIEELLQEDHNAKRRREKYQKQSSLL 400
           N PK I   ++    E  +N L++ I   +N   K++E LQE H        +QKQ++ L
Sbjct: 8   NTPKVITEKKIFLPTEKKIN-LFNIIDRFNNHLKKLKEKLQEAH--------FQKQANKL 58

Query: 401 SKLTRQLSIHDNRAAASSYSNDSPEAE 481
           +   ++L  +D+  + S   NDS   E
Sbjct: 59  TSKEQELKDNDDGKSKSKNENDSTSPE 85

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>RHG25_HUMAN (P42331) Rho-GTPase-activating protein 25|
          Length = 638

 Score = 32.3 bits (72), Expect = 0.72
 Identities = 30/123 (24%), Positives = 56/123 (45%)
 Frame = +2

Query: 50  SKGGSFKAANSEGGPLKQNQPDSSTDAMIRRPADPEEELRWMSQEVRGYVEAVLNSLAAN 229
           SKG +  + NSE GP K+N  +   D++ R   +  +E+    Q    Y E + N    N
Sbjct: 519 SKGDTLASPNSETGPGKKNSGEEEIDSLQRMVQELRKEIETQKQM---YEEQIKNLEKEN 575

Query: 230 VPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSKL 409
                V  +V +  E++  +       + +A +E  L+   N +R RE  +K++  L + 
Sbjct: 576 YD---VWAKVVRLNEELEKE------KKKSAALEISLR---NMERSREDVEKRNKALEEE 623

Query: 410 TRQ 418
            ++
Sbjct: 624 VKE 626

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>TIG_HELPY (P56420) Trigger factor (TF)|
          Length = 451

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 21/116 (18%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
 Frame = +2

Query: 170 WMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLY-SSISGQSNAKIEELLQE 346
           ++  + R Y E +   L  N+ + IV    +   E  ++ L+ +++      +++ L + 
Sbjct: 281 FLENKARLYNEELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQES 340

Query: 347 DHNAKRRREKYQKQSSLLSKLT---------RQLSIHDNRAAASSYSNDSPEAESP 487
              AK +RE ++  ++   K+T          ++ +HDN    + Y       ++P
Sbjct: 341 QEKAKEKRESFRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNP 396

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>GAL11_KLULA (P32257) Transcription regulatory protein GAL11|
          Length = 1034

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
 Frame = +2

Query: 62  SFKAANSEGGPLKQNQPDSSTDAMIRRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKA 241
           S K  + E    K  Q  +   A ++R    +++   M Q+  G  +A  N + AN+   
Sbjct: 77  SAKRKSIEAQRQKLAQAQAQAQA-VQRQQQQQQQQHHMQQQGSGQQQA--NGIPANINAQ 133

Query: 242 IVLCQVEKAKEDMLNQLYSSISGQSN----AKIEELLQEDHNAKRRREKYQKQSSLLSKL 409
           + L Q  +A++    Q+ S+++GQ       +  +  Q+  N  R +   Q+Q  L ++L
Sbjct: 134 MFLNQQAQARQQAQRQIRSTLTGQQQQQPMPQQPQPQQQQPNMMRPQLTLQQQQQLANEL 193

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>TIG_CAMJR (Q5HWX5) Trigger factor (TF)|
          Length = 444

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 24/121 (19%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
 Frame = +2

Query: 125 DAMIRRPADPEEELRWMSQEVRG-YVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSS 301
           D  ++     E+  + ++ E++G + +A++     ++PK IV     + + DM  Q+ ++
Sbjct: 273 DEKLKEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGIV-----EQETDM--QMRAA 325

Query: 302 ISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSKLT---------RQLSIHDNRAAASS 454
            +  S  +IEEL       + +R+ +++++    KLT         R++ ++D     + 
Sbjct: 326 FNTFSEKEIEELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAI 385

Query: 455 Y 457
           Y
Sbjct: 386 Y 386

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>TIG_CAMJE (Q46108) Trigger factor (TF)|
          Length = 444

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 24/121 (19%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
 Frame = +2

Query: 125 DAMIRRPADPEEELRWMSQEVRG-YVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSS 301
           D  ++     E+  + ++ E++G + +A++     ++PK IV     + + DM  Q+ ++
Sbjct: 273 DEKLKEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGIV-----EQETDM--QMRAA 325

Query: 302 ISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSKLT---------RQLSIHDNRAAASS 454
            +  S  +IEEL       + +R+ +++++    KLT         R++ ++D     + 
Sbjct: 326 FNTFSEKEIEELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAI 385

Query: 455 Y 457
           Y
Sbjct: 386 Y 386

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>ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor|
           p53-binding protein 2) (p53-binding protein 2) (p53BP2)
           (53BP2) (Bcl2-binding protein) (Bbp) (NY-REN-51 antigen)
          Length = 1128

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
 Frame = +2

Query: 146 ADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAK 325
           A  E+ L+++ Q+ +   + V         K I   Q  K K+    + +      SN K
Sbjct: 150 ATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQEAKLKKVRALKGHVEQKRLSNGK 209

Query: 326 -IEELLQEDHNAKRRREKYQKQSSLLSKLTRQLSIHDNRAAASSYSNDSPEAESPR 490
            +EE+ Q ++  ++++ +     S + +LTRQL +  N    S + N S  AE  R
Sbjct: 210 LVEEIEQMNNLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDSHHDNQSAVAELDR 265

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>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 952

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
 Frame = +2

Query: 311 QSNAKIEELLQEDHNAKRRREKYQKQSSLLSKLTRQ------LSIHDNRAAASSYSNDSP 472
           Q +++ ++  Q+   +  +++K +K  S L KL         LSIH  R   ++++ND+ 
Sbjct: 94  QKSSQPKQPSQDSVPSDTKKDKKKKGPSDLEKLKEDAKFQEFLSIHQKRTQVATWANDAL 153

Query: 473 EAESPR 490
           EA+ P+
Sbjct: 154 EAKLPK 159

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>PROB_SCHPO (O13810) Probable glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl|
           kinase) (GK)
          Length = 402

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 23/57 (40%), Positives = 31/57 (54%)
 Frame = +3

Query: 324 KSKSFSKKITMLNVEGKSTRSNHLCCQSSHANLVSMTIELLLPLIQMTVRKLRALGH 494
           KSKS +K  T++   G S+    +C + +H  L+S      L LI  TV KLR LGH
Sbjct: 4   KSKSTNKTYTIVIKLGTSS----ICDEKTHEPLISN-----LSLIVETVVKLRKLGH 51

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>NIN_HUMAN (Q8N4C6) Ninein (hNinein)|
          Length = 2090

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 24/131 (18%)
 Frame = +2

Query: 104  NQPDSSTDAMIRRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDML 283
            N+ DS ++  +      +EE+ W   E      A +  +  N+ K I   +++  + D+ 
Sbjct: 1534 NEEDSISNLKLGTLNGSQEEM-WQKTETVKQENAAVQKMVENLKKQISELKIKNQQLDLE 1592

Query: 284  NQLYSSISGQS-----------------------NAKIEELLQEDHNAKRRREKYQKQSS 394
            N   S  + Q+                       N+ +EE  QE  N K   E+ + QSS
Sbjct: 1593 NTELSQKNSQNQEKLQELNQRLTEMLCQKEKEPGNSALEEREQEKFNLKEELERCKVQSS 1652

Query: 395  -LLSKLTRQLS 424
             L+S L  +LS
Sbjct: 1653 TLVSSLEAELS 1663

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>SF3B2_HUMAN (Q13435) Splicing factor 3B subunit 2 (Spliceosome-associated|
           protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing
           factor SF3b 145 kDa subunit)
          Length = 872

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
 Frame = +2

Query: 260 EKAKEDMLNQLYSSISGQSNAKIEE----LLQEDHNAKRRREKYQKQSSLLSKLTRQLSI 427
           ++ +E+M     SS+ GQS ++ EE    + +++ N KRR  K +K+   +  ++ + S 
Sbjct: 267 QQEEEEMETDARSSL-GQSASETEEDTVSVSKKEKNRKRRNRKKKKKPQRVRGVSSESSG 325

Query: 428 HDNRAAASSYSNDSPEAE 481
              + +  S  +DSP A+
Sbjct: 326 DREKDSTRSRGSDSPAAD 343

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>TAOK1_RAT (O88664) Serine/threonine-protein kinase TAO1 (EC 2.7.11.1) (Thousand|
            and one amino acid protein 1)
          Length = 1001

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
 Frame = +2

Query: 95   LKQNQPDSSTDAMIRRPADPE-EELRWMSQEVRGYVEAVLNSLAANVPKAIVL-CQVEKA 268
            L +  P S   A+++R  + +  +L  ++++    +  +L++ A  + +A    CQV K 
Sbjct: 744  LLETTPKSEHKAVLKRLKEEQTRKLAILAEQYDHSINEMLSTQALRLDEAQEAECQVLKM 803

Query: 269  KE----DMLNQLYSSISGQSNAKIEELLQE-DHNAKRRR----------------EKYQK 385
            +     ++LN   S I  Q+ A+ +  L+E +     RR                E+ ++
Sbjct: 804  QLQQELELLNAYQSKIKMQAEAQHDRELRELEQRVSLRRALLEQKIEEEMLALQNERTER 863

Query: 386  QSSLLSKLTRQLSIHDNRAAASSYSND-----SPEAESPRTPG 499
              SLL +  R++   D+ +    +SN      SPEA S   PG
Sbjct: 864  IRSLLERQAREIEAFDSESMRLGFSNMVLSNLSPEAFSHSYPG 906

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>TAOK1_MOUSE (Q5F2E8) Serine/threonine-protein kinase TAO1 (EC 2.7.11.1) (Thousand|
            and one amino acid protein 1)
          Length = 1001

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
 Frame = +2

Query: 95   LKQNQPDSSTDAMIRRPADPE-EELRWMSQEVRGYVEAVLNSLAANVPKAIVL-CQVEKA 268
            L +  P S   A+++R  + +  +L  ++++    +  +L++ A  + +A    CQV K 
Sbjct: 744  LLETTPKSEHKAVLKRLKEEQTRKLAILAEQYDHSINEMLSTQALRLDEAQEAECQVLKM 803

Query: 269  KE----DMLNQLYSSISGQSNAKIEELLQE-DHNAKRRR----------------EKYQK 385
            +     ++LN   S I  Q+ A+ +  L+E +     RR                E+ ++
Sbjct: 804  QLQQELELLNAYQSKIKMQAEAQHDRELRELEQRVSLRRALLEQKIEEEMLALQNERTER 863

Query: 386  QSSLLSKLTRQLSIHDNRAAASSYSND-----SPEAESPRTPG 499
              SLL +  R++   D+ +    +SN      SPEA S   PG
Sbjct: 864  IRSLLERQAREIEAFDSESMRLGFSNMVLSNLSPEAFSHSYPG 906

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>TAOK1_HUMAN (Q7L7X3) Serine/threonine-protein kinase TAO1 (EC 2.7.11.1) (Thousand|
            and one amino acid protein 1) (STE20-like kinase PSK2)
            (Kinase from chicken homolog B) (hKFC-B)
          Length = 1001

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
 Frame = +2

Query: 95   LKQNQPDSSTDAMIRRPADPE-EELRWMSQEVRGYVEAVLNSLAANVPKAIVL-CQVEKA 268
            L +  P S   A+++R  + +  +L  ++++    +  +L++ A  + +A    CQV K 
Sbjct: 744  LLETTPKSEHKAVLKRLKEEQTRKLAILAEQYDHSINEMLSTQALRLDEAQEAECQVLKM 803

Query: 269  KE----DMLNQLYSSISGQSNAKIEELLQE-DHNAKRRR----------------EKYQK 385
            +     ++LN   S I  Q+ A+ +  L+E +     RR                E+ ++
Sbjct: 804  QLQQELELLNAYQSKIKMQAEAQHDRELRELEQRVSLRRALLEQKIEEEMLALQNERTER 863

Query: 386  QSSLLSKLTRQLSIHDNRAAASSYSND-----SPEAESPRTPG 499
              SLL +  R++   D+ +    +SN      SPEA S   PG
Sbjct: 864  IRSLLERQAREIEAFDSESMRLGFSNMVLSNLSPEAFSHSYPG 906

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>IF2_HELPY (P55972) Translation initiation factor IF-2|
          Length = 944

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
 Frame = +2

Query: 227 NVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSK 406
           N PK +   Q+EKAK+ +          +S   + +L Q + N        +K+ S + K
Sbjct: 142 NTPKVVSHSQIEKAKQKLQE------IQKSREALNKLTQSNANNASNANNAKKEISEVKK 195

Query: 407 LTRQLSIHDNRAAASSY----SNDSPEAES 484
             +++  H+N    + +     ND  E ES
Sbjct: 196 QEQEIKRHENIKRRTGFRVIKRNDEVENES 225

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>CLH_SCHPO (Q10161) Probable clathrin heavy chain|
          Length = 1666

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 26/101 (25%), Positives = 47/101 (46%)
 Frame = +2

Query: 173  MSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQEDH 352
            M Q +  YV+ +  S    V  A++    +   E+++  L  S+ GQ    ++EL++E  
Sbjct: 793  MFQFIEIYVQRINPSKTPQVVGALLDIDCD---EELVQNLLMSVVGQ--VPVDELVEEVE 847

Query: 353  NAKRRREKYQKQSSLLSKLTRQLSIHDNRAAASSYSNDSPE 475
               R +       SLL   ++  +I+D  A     SN++PE
Sbjct: 848  RRNRLKLLLPYLESLLQSGSQDRAIYDALAKIYIDSNNNPE 888

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>DNAK2_SYNP7 (P50021) Chaperone protein dnaK2 (Heat shock protein 70-2) (Heat|
           shock 70 kDa protein 2) (HSP70-2)
          Length = 634

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 23/76 (30%), Positives = 35/76 (46%)
 Frame = +2

Query: 272 EDMLNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSKLTRQLSIHDNRAAAS 451
           E  L++L   IS    +K+E  +QE  +A    E Y K  S++ +L + L      A +S
Sbjct: 541 EKQLSELGDKISADEKSKVEGFIQELKDA-LAAEDYDKIKSIIEQLQQAL----YAAGSS 595

Query: 452 SYSNDSPEAESPRTPG 499
            Y   S EA +    G
Sbjct: 596 VYQQASAEASANAQAG 611

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>TENS1_HUMAN (Q9HBL0) Tensin-1|
          Length = 1735

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 440 AAASSYSNDSPEAESPRTPG 499
           A+   Y N SPEA SPR+PG
Sbjct: 898 ASDGQYENQSPEATSPRSPG 917

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>ATR_XENLA (Q9DE14) Serine/threonine-protein kinase atr (EC 2.7.11.1) (Ataxia|
            telangiectasia and Rad3-related protein) (Xatr)
          Length = 2654

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -3

Query: 332  LRFLHCFARLSSCIAGSTYPPLLSPLGRAQ*PSGHLLLDYLEQP 201
            L  LHC    S C+AG++Y  + S L  A+  S H+     ++P
Sbjct: 905  LHLLHCLLSKSPCVAGASYTEIRS-LAAAKSTSLHIFFSQYKKP 947

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>NARQ_ECOLI (P27896) Nitrate/nitrite sensor protein narQ (EC 2.7.13.3)|
          Length = 566

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +2

Query: 218 LAANVPKAI-VLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSS 394
           L  N+P  + +L +        L++LY S+     A +EE  ++ H AKRR E   + S 
Sbjct: 200 LDTNLPNELGLLAKTFNQMSSELHKLYRSLE----ASVEEKTRDLHEAKRRLEVLYQCSQ 255

Query: 395 LLSKLTRQLSIH 430
            L+  T Q+ +H
Sbjct: 256 ALN--TSQIDVH 265

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>DNAK2_SYNP6 (Q5N1J4) Chaperone protein dnaK 2 (Heat shock protein 70 2) (Heat|
           shock 70 kDa protein 2) (HSP70 2)
          Length = 634

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 23/76 (30%), Positives = 35/76 (46%)
 Frame = +2

Query: 272 EDMLNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSKLTRQLSIHDNRAAAS 451
           E  L++L   IS    +K+E  +QE  +A    E Y K  S++ +L + L      A +S
Sbjct: 541 EKQLSELGDKISADEKSKVEGFIQELKDA-LAAEDYDKIRSIIEQLQQAL----YAAGSS 595

Query: 452 SYSNDSPEAESPRTPG 499
            Y   S EA +    G
Sbjct: 596 VYQQASAEASANAQAG 611

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>DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)|
          Length = 691

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 17/80 (21%), Positives = 39/80 (48%)
 Frame = +2

Query: 185 VRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQEDHNAKR 364
           ++ Y   V  ++  +VPKA++   V   K+ + ++L   +     A +++LL E  +  +
Sbjct: 606 IKSYFLIVRKNIQDSVPKAVMHFLVNHVKDSLQSELVGQL--YKPALLDDLLTESEDMAQ 663

Query: 365 RREKYQKQSSLLSKLTRQLS 424
           RR +       L K ++ ++
Sbjct: 664 RRNEAADMLKALQKASQVIA 683

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>YHCB_ECOLI (P0ADW3) Putative cytochrome d ubiquinol oxidase subunit III (EC|
           1.10.3.-) (Cytochrome bd-I oxidase subunit III)
          Length = 134

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +2

Query: 320 AKIEELLQEDHNAKRRREKYQ----KQSSLLSKLTRQLSIHDNRAAASSYSNDSPEAESP 487
           A+  ELL  D  A   R+ YQ      SSLL +L+ + +   NR A S  SND    + P
Sbjct: 59  ARSAELL--DTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAESEASNDQAPVQMP 116

Query: 488 R 490
           R
Sbjct: 117 R 117

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>YHCB_ECOL6 (P0ADW4) Putative cytochrome d ubiquinol oxidase subunit III (EC|
           1.10.3.-) (Cytochrome bd-I oxidase subunit III)
          Length = 134

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +2

Query: 320 AKIEELLQEDHNAKRRREKYQ----KQSSLLSKLTRQLSIHDNRAAASSYSNDSPEAESP 487
           A+  ELL  D  A   R+ YQ      SSLL +L+ + +   NR A S  SND    + P
Sbjct: 59  ARSAELL--DTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAESEASNDQAPVQMP 116

Query: 488 R 490
           R
Sbjct: 117 R 117

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>YHCB_ECO57 (P0ADW5) Putative cytochrome d ubiquinol oxidase subunit III (EC|
           1.10.3.-) (Cytochrome bd-I oxidase subunit III)
          Length = 134

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +2

Query: 320 AKIEELLQEDHNAKRRREKYQ----KQSSLLSKLTRQLSIHDNRAAASSYSNDSPEAESP 487
           A+  ELL  D  A   R+ YQ      SSLL +L+ + +   NR A S  SND    + P
Sbjct: 59  ARSAELL--DTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAESEASNDQAPVQMP 116

Query: 488 R 490
           R
Sbjct: 117 R 117

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>EXOC4_CAEEL (Q9XWS2) Probable exocyst complex component 4 (Exocyst complex|
           component Sec8)
          Length = 893

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +2

Query: 134 IRRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKED 277
           I+  A   E LRW S E+R     +++SL ANV   +  C V+   +D
Sbjct: 640 IKMFASLHESLRWFSDEIR----ELVHSLPANVKMMLDTCMVQVRLKD 683

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>TAO1B_XENLA (Q7ZYJ0) Serine/threonine-protein kinase TAO1-B (EC 2.7.11.1)|
            (Thousand and one amino acid protein 1-B)
          Length = 1001

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
 Frame = +2

Query: 227  NVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSK 406
            N  ++ +  Q E   E  + +L   +S +  A +E+ ++E+  A +  E+ ++  SLL +
Sbjct: 813  NAYQSKIKMQAEAQHEREIRELEQRVSLR-RALLEQKIEEEMLALQN-ERTERIRSLLER 870

Query: 407  LTRQLSIHDNRAAASSYSND-----SPEAESPRTPG 499
              R++   D+ +    +SN      SPEA S   PG
Sbjct: 871  QAREIEAFDSESMRLGFSNMILSNLSPEAFSHSYPG 906

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>VPS41_LYCES (P93231) Vacuolar assembly protein VPS41 homolog|
          Length = 960

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 116 SSTDAMIRRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQV 259
           S  D +I +P D E+ + W+ Q   G+ E  L ++ AN  ++ +L +V
Sbjct: 386 SPKDVVIAKPRDAEDHINWLLQ--HGWHEKALEAVEANQGQSELLDEV 431

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>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 960

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
 Frame = +2

Query: 362 RRREKYQKQSSLLSKLTRQ------LSIHDNRAAASSYSNDSPEAE 481
           ++ EK +K +  L KL         LS+H  RA A++++ND  +AE
Sbjct: 112 KKDEKKKKVAGQLEKLKEDTEFQEFLSVHQRRAQAATWANDGLDAE 157

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>CPXP_SHIFL (P0AE87) Periplasmic protein cpxP precursor|
          Length = 166

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
 Frame = +2

Query: 98  KQNQPDSSTDAMIRRPADPEEELRWMSQEV--RGYVEAVLNSLAANVPKAIVLCQVEKAK 271
           +Q   D    A   +P     EL  M + V    + E  + + A  +    +  QVE AK
Sbjct: 56  RQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQAEKMANEQIARQVEMAK 115

Query: 272 EDMLNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSL 397
             + NQ+Y  ++ +  A + E  Q+     R   ++QK SSL
Sbjct: 116 --VRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKSSSL 155

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>CPXP_ECOLI (P0AE85) Periplasmic protein cpxP precursor|
          Length = 166

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
 Frame = +2

Query: 98  KQNQPDSSTDAMIRRPADPEEELRWMSQEV--RGYVEAVLNSLAANVPKAIVLCQVEKAK 271
           +Q   D    A   +P     EL  M + V    + E  + + A  +    +  QVE AK
Sbjct: 56  RQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQAEKMANEQIARQVEMAK 115

Query: 272 EDMLNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSL 397
             + NQ+Y  ++ +  A + E  Q+     R   ++QK SSL
Sbjct: 116 --VRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKSSSL 155

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>CPXP_ECOL6 (P0AE86) Periplasmic protein cpxP precursor|
          Length = 166

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
 Frame = +2

Query: 98  KQNQPDSSTDAMIRRPADPEEELRWMSQEV--RGYVEAVLNSLAANVPKAIVLCQVEKAK 271
           +Q   D    A   +P     EL  M + V    + E  + + A  +    +  QVE AK
Sbjct: 56  RQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQAEKMANEQIARQVEMAK 115

Query: 272 EDMLNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSL 397
             + NQ+Y  ++ +  A + E  Q+     R   ++QK SSL
Sbjct: 116 --VRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKSSSL 155

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>MRP4_STRPY (P30141) Fibrinogen- and Ig-binding protein precursor (MRP protein)|
          Length = 388

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 35/167 (20%), Positives = 68/167 (40%), Gaps = 10/167 (5%)
 Frame = +2

Query: 14  VEWVNKIKAVIQSKGGSFKAANSEGGPLKQNQPDSSTDAMIRRPADPEEELRWMSQEVR- 190
           V+ +      I +K     AA S+         ++  +A+ ++ A   EE+  +  E   
Sbjct: 137 VQTIQNASREIAAKQQELAAAKSQ-----LEAKNAEIEALKQQDASKTEEIAKLQSEAAT 191

Query: 191 -----GYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQEDHN 355
                G  +  L  L A +  A      EKAK +       ++ G +  ++ +L  +   
Sbjct: 192 LENLLGSAKRELTELQAKLDTATA----EKAKLESQVTTLENLLGSAKRELTDLQAKLDA 247

Query: 356 AKRRREKYQKQSSLLSK----LTRQLSIHDNRAAASSYSNDSPEAES 484
           A   +EK Q Q++ L K      ++L+    + AA++   +  EAE+
Sbjct: 248 ANAEKEKLQSQAATLEKQLEATKKELADLQAKLAATNQEKEKLEAEA 294

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>FGD5_MOUSE (Q80UZ0) FYVE, RhoGEF and PH domain-containing protein 5|
          Length = 1219

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 291 YTAR*AGKAMQKSKSFSKKITMLNVEGKSTRSNHL 395
           Y+ R  G  +Q  + F K+ T++ V GKS    HL
Sbjct: 855 YSVRGQGDLLQPGREFLKEGTLMRVRGKSRHPRHL 889

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>CCD46_HUMAN (Q8N8E3) Coiled-coil domain-containing protein 46|
          Length = 955

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
 Frame = +2

Query: 101 QNQPDSSTDAMIRRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQV-EKAKED 277
           Q + D+    ++ R  +  EEL+ + +  +   E  +  L   V   I  CQV  + KED
Sbjct: 276 QQKHDADVQKILERKNNEIEELKTLYRSKQHETEETIRKLEKKVQTLIRDCQVIRETKED 335

Query: 278 MLNQLYSSISGQSNAKIEELLQEDHN--AKRRREKYQKQ 388
            + +L       + +   +  ++ HN  A+  +EK+  Q
Sbjct: 336 QIAELKKICEQSTESLNNDWEKKLHNAVAEMEQEKFDLQ 374

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>ATX3_CHICK (Q9W689) Ataxin-3 (EC 3.4.22.-) (Machado-Joseph disease protein 1|
           homolog)
          Length = 363

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 32/161 (19%), Positives = 64/161 (39%), Gaps = 5/161 (3%)
 Frame = +2

Query: 5   ADKVEWVNKIKAVIQSKGGSFKAANSEGGPLKQNQPDSSTDAMIRRPAD-----PEEELR 169
           AD++  + +++ V + K    + A S    L ++  D + +  +  P D      E+E  
Sbjct: 174 ADQLLQMIRVQQVQRPKLIGEETAQSRDQRLPRSDVDQAIE--VSHPFDGTGMLDEDEEN 231

Query: 170 WMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQED 349
           +         E  +    A++ +AI L      + +  N L  + S   +    + L  +
Sbjct: 232 FQRALALSRQEIDMEDEEADLRRAIQLSMQGSRQSEFSNSLPQNASQPPHTSQTDSLSSE 291

Query: 350 HNAKRRREKYQKQSSLLSKLTRQLSIHDNRAAASSYSNDSP 472
              +RR+  ++KQ   L +    L++HD     SS     P
Sbjct: 292 DLRRRRQAYFEKQQQQLQQQDLTLNLHDKPTINSSTLEADP 332

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>LON_MYCGE (P47481) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 795

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 28/129 (21%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
 Frame = +2

Query: 113 DSSTDAMIRRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAI------------VLCQ 256
           +++ D  ++R    +EE+  + +    ++E    S   NVPK +            ++  
Sbjct: 125 EANVDRFLQRIFPEKEEIEQLMEGAEKFLELENISKTVNVPKGLKQLDIITFKLANLVPN 184

Query: 257 VEKAKEDML--NQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSKLTRQLSIH 430
            E  K+ +L  N++ + +     A IE+ LQ+  +  R + K  +   L SK+TR+++  
Sbjct: 185 TESIKQAILEENEIANRLEKIIQAGIED-LQKIQDYGRSKNKETEFDKLDSKITRKINEQ 243

Query: 431 DNRAAASSY 457
            +R     Y
Sbjct: 244 LSRQQRDFY 252

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>ZN101_HUMAN (Q8IZC7) Zinc finger protein 101 (Zinc finger protein HZF12)|
          Length = 436

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -3

Query: 482 SQLPDCHLNKRKQ 444
           SQ+PDCHLNK+ Q
Sbjct: 84  SQIPDCHLNKKSQ 96

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>MYS3_HYDAT (P39922) Myosin heavy chain, clone 203 (Fragment)|
          Length = 539

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
 Frame = +2

Query: 248 LCQVEKAKEDM---LNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQ----SSLLSK 406
           +  +E AKE +   ++QL   I  +  AKIEEL +E  N ++ R+K + Q     S + +
Sbjct: 290 ISDLENAKEGLESQISQLQRKIQ-ELLAKIEELEEELENERKLRQKSELQRKELESRIEE 348

Query: 407 LTRQLSIHDNRAAASSYSNDSPEAESPR 490
           L  QL       +A        EAE  R
Sbjct: 349 LQDQLETAGGATSAQVEVGKKREAECNR 376

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>TIG_CLOPE (Q8XKK0) Trigger factor (TF)|
          Length = 428

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 18/89 (20%), Positives = 42/89 (47%)
 Frame = +2

Query: 128 AMIRRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSIS 307
           A ++  A    ELR   +     + AV+++    +P+A++  +VE    D+  +L     
Sbjct: 269 ADLKEKAVKANELRAKREMEEKVINAVVDNAKVEIPEAMINREVENMVRDLEMRL----- 323

Query: 308 GQSNAKIEELLQEDHNAKRRREKYQKQSS 394
           GQ    +E+  +   + + + + Y K+++
Sbjct: 324 GQQGLSLEQYYEFTGSTEDKMKSYMKENA 352

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>VP6_AHSV3 (Q64909) VP6 protein (Minor inner core protein VP6)|
          Length = 369

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +2

Query: 257 VEKAKEDMLNQLYSSISGQSNA-KIEELLQEDHNAKRRREKYQKQSSLLSKLTRQLSIHD 433
           +EKAK ++  +  + +  + N+ + +  L+ED   K + EK + +            IHD
Sbjct: 13  IEKAKRELEQRSIAPLLREKNSTEAKSKLKEDGEKKNKSEKEENK------------IHD 60

Query: 434 NRAAASSYSNDSPEAESPRTPG 499
           +R   S  S  S  A+  R  G
Sbjct: 61  DRRVESQESEGSGSADCQRGAG 82


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,744,158
Number of Sequences: 219361
Number of extensions: 1176918
Number of successful extensions: 4455
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 4322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4449
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result