ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags22h03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK058451.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H01, full insert sequence Length = 1202 Score = 698 bits (352), Expect = 0.0 Identities = 496/543 (91%), Gaps = 1/543 (0%) Strand = Plus / Plus Query: 8 ttctgcatttggtcctgaatttgttnagcc-gctctctcagtagataaaaaggtaaccct 66 |||||||||||| ||||||||||| || | ||||| |||| ||||||||||| ||||| Sbjct: 332 ttctgcatttgggcctgaatttgtccaggctgctctaacagtggataaaaaggtcaccct 391 Query: 67 tttccactttgaggatgaaccccgtaccggtgtatgtgaagttatatataccttaagaga 126 ||| ||||||||||||||||||||| | ||||||||||||||||||| |||||||||||| Sbjct: 392 ttttcactttgaggatgaaccccgttctggtgtatgtgaagttatatctaccttaagaga 451 Query: 127 aaaggctaaacttcgaatcatgatgcttactggagatcatgaatcaagtgctcagagagt 186 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 452 caaggctaaacttcgcatcatgatgcttacgggagatcatgaatcaagtgctctaagagt 511 Query: 187 tgctaaagctgtatgtatcgaagaagttcacttctctttaaagccagaggacaagttgaa 246 |||||||||||| |||||||| |||||||||| || |||||||||||||||||||||||| Sbjct: 512 tgctaaagctgtttgtatcgacgaagttcactgctgtttaaagccagaggacaagttgaa 571 Query: 247 taaagtaaaagcagtttcaagggaaggaggtggaggtttaataatggttggtgatggtat 306 |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| || Sbjct: 572 taaagtaaaagcagtttcaagggagggaggtggaggtctaataatggttggtgatggcat 631 Query: 307 aaatgatgcaccagctcttgcagctgcaacagttggtattgttctagcacaacgcgccag 366 |||||||||||||||||||||||||||||| |||||||| |||||||| || || ||||| Sbjct: 632 aaatgatgcaccagctcttgcagctgcaacggttggtatagttctagcccagcgtgccag 691 Query: 367 tgcaacagcggtagctgttgcggatgttctgttgttgcaggataatttatgtgtggtgcc 426 |||||||||||| |||||||| |||||||| ||||||||||||||| |||||| |||||| Sbjct: 692 tgcaacagcggtggctgttgcagatgttcttttgttgcaggataatatatgtggggtgcc 751 Query: 427 attttgtatcgctaaagctcgccaaacaacttcattggtgaagcaaagcgtagctcttgc 486 ||||||||| ||||||||||| ||||||||||| ||||| |||||||| ||||||||||| Sbjct: 752 attttgtatagctaaagctcgtcaaacaacttctttggtcaagcaaagtgtagctcttgc 811 Query: 487 cttaacctgtattgtttttgctgcacttccttctgtcttaggatttcttcctctttggtt 546 || | |||||||||||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 812 attgtcttgtattgtttttgcggcacttccttctgttttgggatttcttcctctttggtt 871 Query: 547 gac 549 ||| Sbjct: 872 gac 874
>dbj|AK100055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157P15, full insert sequence Length = 2782 Score = 684 bits (345), Expect = 0.0 Identities = 496/544 (91%), Gaps = 2/544 (0%) Strand = Plus / Plus Query: 8 ttctgcatttggtcctgaatttgttnagcc-gctctctcagtagataaaaaggtaaccct 66 |||||||||||| ||||||||||| || | ||||| |||| ||||||||||| ||||| Sbjct: 1911 ttctgcatttgggcctgaatttgtccaggctgctctaacagtggataaaaaggtcaccct 1970 Query: 67 tttc-cactttgaggatgaaccccgtaccggtgtatgtgaagttatatataccttaagag 125 ||| ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| Sbjct: 1971 tttttcactttgaggatgaaccccgttctggtgtatgtgaagttatatctaccttaagag 2030 Query: 126 aaaaggctaaacttcgaatcatgatgcttactggagatcatgaatcaagtgctcagagag 185 | |||||||||||||| |||||||||||||| |||||||||||||||||||||| |||| Sbjct: 2031 acaaggctaaacttcgcatcatgatgcttacgggagatcatgaatcaagtgctctaagag 2090 Query: 186 ttgctaaagctgtatgtatcgaagaagttcacttctctttaaagccagaggacaagttga 245 ||||||||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 2091 ttgctaaagctgtttgtatcgacgaagttcactgctgtttaaagccagaggacaagttga 2150 Query: 246 ataaagtaaaagcagtttcaagggaaggaggtggaggtttaataatggttggtgatggta 305 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| | Sbjct: 2151 ataaagtaaaagcagtttcaagggagggaggtggaggtctaataatggttggtgatggca 2210 Query: 306 taaatgatgcaccagctcttgcagctgcaacagttggtattgttctagcacaacgcgcca 365 ||||||||||||||||||||||||||||||| |||||||| |||||||| || || |||| Sbjct: 2211 taaatgatgcaccagctcttgcagctgcaacggttggtatagttctagcccagcgtgcca 2270 Query: 366 gtgcaacagcggtagctgttgcggatgttctgttgttgcaggataatttatgtgtggtgc 425 ||||||||||||| |||||||| |||||||| ||||||||||||||| |||||| ||||| Sbjct: 2271 gtgcaacagcggtggctgttgcagatgttcttttgttgcaggataatatatgtggggtgc 2330 Query: 426 cattttgtatcgctaaagctcgccaaacaacttcattggtgaagcaaagcgtagctcttg 485 |||||||||| ||||||||||| ||||||||||| ||||| |||||||| |||||||||| Sbjct: 2331 cattttgtatagctaaagctcgtcaaacaacttctttggtcaagcaaagtgtagctcttg 2390 Query: 486 ccttaacctgtattgtttttgctgcacttccttctgtcttaggatttcttcctctttggt 545 | || | |||||||||||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 2391 cattgtcttgtattgtttttgcggcacttccttctgttttgggatttcttcctctttggt 2450 Query: 546 tgac 549 |||| Sbjct: 2451 tgac 2454
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 319 bits (161), Expect = 6e-84 Identities = 206/221 (93%) Strand = Plus / Minus Query: 57 aggtaacccttttccactttgaggatgaaccccgtaccggtgtatgtgaagttatatata 116 |||| |||||||| ||||||||||||||||||||| | ||||||||||||||||||| || Sbjct: 28408186 aggtcaccctttttcactttgaggatgaaccccgttctggtgtatgtgaagttatatcta 28408127 Query: 117 ccttaagagaaaaggctaaacttcgaatcatgatgcttactggagatcatgaatcaagtg 176 |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 28408126 ccttaagagacaaggctaaacttcgcatcatgatgcttacgggagatcatgaatcaagtg 28408067 Query: 177 ctcagagagttgctaaagctgtatgtatcgaagaagttcacttctctttaaagccagagg 236 ||| ||||||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 28408066 ctctaagagttgctaaagctgtttgtatcgacgaagttcactgctgtttaaagccagagg 28408007 Query: 237 acaagttgaataaagtaaaagcagtttcaagggaaggaggt 277 |||||||||||||||||||||||||||||||||| |||||| Sbjct: 28408006 acaagttgaataaagtaaaagcagtttcaagggagggaggt 28407966 Score = 262 bits (132), Expect = 1e-66 Identities = 177/192 (92%) Strand = Plus / Minus Query: 274 aggtggaggtttaataatggttggtgatggtataaatgatgcaccagctcttgcagctgc 333 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 28406832 aggtggaggtctaataatggttggtgatggcataaatgatgcaccagctcttgcagctgc 28406773 Query: 334 aacagttggtattgttctagcacaacgcgccagtgcaacagcggtagctgttgcggatgt 393 ||| |||||||| |||||||| || || ||||||||||||||||| |||||||| ||||| Sbjct: 28406772 aacggttggtatagttctagcccagcgtgccagtgcaacagcggtggctgttgcagatgt 28406713 Query: 394 tctgttgttgcaggataatttatgtgtggtgccattttgtatcgctaaagctcgccaaac 453 ||| ||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||||| Sbjct: 28406712 tcttttgttgcaggataatatatgtggggtgccattttgtatagctaaagctcgtcaaac 28406653 Query: 454 aacttcattggt 465 |||||| ||||| Sbjct: 28406652 aacttctttggt 28406641 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 467 aagcaaagcgtagctcttgccttaacctgtattgtttttgctgcacttccttctgtctta 526 |||||||| ||||||||||| || | |||||||||||||| |||||||||||||| || Sbjct: 28406545 aagcaaagtgtagctcttgcattgtcttgtattgtttttgcggcacttccttctgttttg 28406486 Query: 527 ggatttcttcctctttggttgac 549 ||||||||||||||||||||||| Sbjct: 28406485 ggatttcttcctctttggttgac 28406463 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 ttctgcatttggtcctgaatttgt 31 |||||||||||| ||||||||||| Sbjct: 28408844 ttctgcatttgggcctgaatttgt 28408821
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 319 bits (161), Expect = 6e-84 Identities = 206/221 (93%) Strand = Plus / Minus Query: 57 aggtaacccttttccactttgaggatgaaccccgtaccggtgtatgtgaagttatatata 116 |||| |||||||| ||||||||||||||||||||| | ||||||||||||||||||| || Sbjct: 120764 aggtcaccctttttcactttgaggatgaaccccgttctggtgtatgtgaagttatatcta 120705 Query: 117 ccttaagagaaaaggctaaacttcgaatcatgatgcttactggagatcatgaatcaagtg 176 |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 120704 ccttaagagacaaggctaaacttcgcatcatgatgcttacgggagatcatgaatcaagtg 120645 Query: 177 ctcagagagttgctaaagctgtatgtatcgaagaagttcacttctctttaaagccagagg 236 ||| ||||||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 120644 ctctaagagttgctaaagctgtttgtatcgacgaagttcactgctgtttaaagccagagg 120585 Query: 237 acaagttgaataaagtaaaagcagtttcaagggaaggaggt 277 |||||||||||||||||||||||||||||||||| |||||| Sbjct: 120584 acaagttgaataaagtaaaagcagtttcaagggagggaggt 120544 Score = 262 bits (132), Expect = 1e-66 Identities = 177/192 (92%) Strand = Plus / Minus Query: 274 aggtggaggtttaataatggttggtgatggtataaatgatgcaccagctcttgcagctgc 333 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 119410 aggtggaggtctaataatggttggtgatggcataaatgatgcaccagctcttgcagctgc 119351 Query: 334 aacagttggtattgttctagcacaacgcgccagtgcaacagcggtagctgttgcggatgt 393 ||| |||||||| |||||||| || || ||||||||||||||||| |||||||| ||||| Sbjct: 119350 aacggttggtatagttctagcccagcgtgccagtgcaacagcggtggctgttgcagatgt 119291 Query: 394 tctgttgttgcaggataatttatgtgtggtgccattttgtatcgctaaagctcgccaaac 453 ||| ||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||||| Sbjct: 119290 tcttttgttgcaggataatatatgtggggtgccattttgtatagctaaagctcgtcaaac 119231 Query: 454 aacttcattggt 465 |||||| ||||| Sbjct: 119230 aacttctttggt 119219 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 467 aagcaaagcgtagctcttgccttaacctgtattgtttttgctgcacttccttctgtctta 526 |||||||| ||||||||||| || | |||||||||||||| |||||||||||||| || Sbjct: 119123 aagcaaagtgtagctcttgcattgtcttgtattgtttttgcggcacttccttctgttttg 119064 Query: 527 ggatttcttcctctttggttgac 549 ||||||||||||||||||||||| Sbjct: 119063 ggatttcttcctctttggttgac 119041 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 ttctgcatttggtcctgaatttgt 31 |||||||||||| ||||||||||| Sbjct: 121422 ttctgcatttgggcctgaatttgt 121399
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 319 bits (161), Expect = 6e-84 Identities = 206/221 (93%) Strand = Plus / Minus Query: 57 aggtaacccttttccactttgaggatgaaccccgtaccggtgtatgtgaagttatatata 116 |||| |||||||| ||||||||||||||||||||| | ||||||||||||||||||| || Sbjct: 15219 aggtcaccctttttcactttgaggatgaaccccgttctggtgtatgtgaagttatatcta 15160 Query: 117 ccttaagagaaaaggctaaacttcgaatcatgatgcttactggagatcatgaatcaagtg 176 |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 15159 ccttaagagacaaggctaaacttcgcatcatgatgcttacgggagatcatgaatcaagtg 15100 Query: 177 ctcagagagttgctaaagctgtatgtatcgaagaagttcacttctctttaaagccagagg 236 ||| ||||||||||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 15099 ctctaagagttgctaaagctgtttgtatcgacgaagttcactgctgtttaaagccagagg 15040 Query: 237 acaagttgaataaagtaaaagcagtttcaagggaaggaggt 277 |||||||||||||||||||||||||||||||||| |||||| Sbjct: 15039 acaagttgaataaagtaaaagcagtttcaagggagggaggt 14999 Score = 262 bits (132), Expect = 1e-66 Identities = 177/192 (92%) Strand = Plus / Minus Query: 274 aggtggaggtttaataatggttggtgatggtataaatgatgcaccagctcttgcagctgc 333 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 13865 aggtggaggtctaataatggttggtgatggcataaatgatgcaccagctcttgcagctgc 13806 Query: 334 aacagttggtattgttctagcacaacgcgccagtgcaacagcggtagctgttgcggatgt 393 ||| |||||||| |||||||| || || ||||||||||||||||| |||||||| ||||| Sbjct: 13805 aacggttggtatagttctagcccagcgtgccagtgcaacagcggtggctgttgcagatgt 13746 Query: 394 tctgttgttgcaggataatttatgtgtggtgccattttgtatcgctaaagctcgccaaac 453 ||| ||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||||| Sbjct: 13745 tcttttgttgcaggataatatatgtggggtgccattttgtatagctaaagctcgtcaaac 13686 Query: 454 aacttcattggt 465 |||||| ||||| Sbjct: 13685 aacttctttggt 13674 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 467 aagcaaagcgtagctcttgccttaacctgtattgtttttgctgcacttccttctgtctta 526 |||||||| ||||||||||| || | |||||||||||||| |||||||||||||| || Sbjct: 13578 aagcaaagtgtagctcttgcattgtcttgtattgtttttgcggcacttccttctgttttg 13519 Query: 527 ggatttcttcctctttggttgac 549 ||||||||||||||||||||||| Sbjct: 13518 ggatttcttcctctttggttgac 13496 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 ttctgcatttggtcctgaatttgt 31 |||||||||||| ||||||||||| Sbjct: 15877 ttctgcatttgggcctgaatttgt 15854
>ref|NM_119890.2| Arabidopsis thaliana HMA1; copper-exporting ATPase AT4G37270 (HMA1) mRNA, complete cds Length = 4089 Score = 85.7 bits (43), Expect = 1e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 267 gggaaggaggtggaggtttaataatggttggtgatggtataaatgatgcaccagctcttg 326 |||||| ||||||||||||||| ||||| || || || || |||||||| |||||||| | Sbjct: 2144 gggaagcaggtggaggtttaattatggtaggagaagggattaatgatgctccagctctag 2203 Query: 327 cagctgcaacagttggtattgttctagcacaacgcgccagtgc 369 ||||||||||||| || |||||||| || ||||| || ||||| Sbjct: 2204 cagctgcaacagtggggattgttcttgctcaacgagcgagtgc 2246 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 435 tcgctaaagctcgccaaacaacttcattggtgaagcaaagcgtagctcttgccttaac 492 |||||||| | ||||| ||||| |||||||| ||||||| |||||||||||| ||||| Sbjct: 2312 tcgctaaatcccgccagacaacatcattggtcaagcaaaacgtagctcttgcattaac 2369
>gb|AY065018.1| Arabidopsis thaliana AT4g37270/C7A10_90 mRNA sequence Length = 2751 Score = 85.7 bits (43), Expect = 1e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 267 gggaaggaggtggaggtttaataatggttggtgatggtataaatgatgcaccagctcttg 326 |||||| ||||||||||||||| ||||| || || || || |||||||| |||||||| | Sbjct: 2143 gggaagcaggtggaggtttaattatggtaggagaagggattaatgatgctccagctctag 2202 Query: 327 cagctgcaacagttggtattgttctagcacaacgcgccagtgc 369 ||||||||||||| || |||||||| || ||||| || ||||| Sbjct: 2203 cagctgcaacagtggggattgttcttgctcaacgagcgagtgc 2245 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 435 tcgctaaagctcgccaaacaacttcattggtgaagcaaagcgtagctcttgccttaac 492 |||||||| | ||||| ||||| |||||||| ||||||| |||||||||||| ||||| Sbjct: 2311 tcgctaaatcccgccagacaacatcattggtcaagcaaaacgtagctcttgcattaac 2368
>gb|AY907350.1| Arabidopsis thaliana chloroplast heavy metal P-type ATPase precursor (HMA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 2460 Score = 85.7 bits (43), Expect = 1e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 267 gggaaggaggtggaggtttaataatggttggtgatggtataaatgatgcaccagctcttg 326 |||||| ||||||||||||||| ||||| || || || || |||||||| |||||||| | Sbjct: 2012 gggaagcaggtggaggtttaattatggtaggagaagggattaatgatgctccagctctag 2071 Query: 327 cagctgcaacagttggtattgttctagcacaacgcgccagtgc 369 ||||||||||||| || |||||||| || ||||| || ||||| Sbjct: 2072 cagctgcaacagtggggattgttcttgctcaacgagcgagtgc 2114 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 435 tcgctaaagctcgccaaacaacttcattggtgaagcaaagcgtagctcttgccttaac 492 |||||||| | ||||| ||||| |||||||| ||||||| |||||||||||| ||||| Sbjct: 2180 tcgctaaatcccgccagacaacatcattggtcaagcaaaacgtagctcttgcattaac 2237
>emb|AJ400906.1|ATH400906 Arabidopsis thaliana mRNA for putative metal ATPase (hma1 gene) Length = 2460 Score = 85.7 bits (43), Expect = 1e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 267 gggaaggaggtggaggtttaataatggttggtgatggtataaatgatgcaccagctcttg 326 |||||| ||||||||||||||| ||||| || || || || |||||||| |||||||| | Sbjct: 2012 gggaagcaggtggaggtttaattatggtaggagaagggattaatgatgctccagctctag 2071 Query: 327 cagctgcaacagttggtattgttctagcacaacgcgccagtgc 369 ||||||||||||| || |||||||| || ||||| || ||||| Sbjct: 2072 cagctgcaacagtggggattgttcttgctcaacgagcgagtgc 2114 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 435 tcgctaaagctcgccaaacaacttcattggtgaagcaaagcgtagctcttgccttaac 492 |||||||| | ||||| ||||| |||||||| ||||||| |||||||||||| ||||| Sbjct: 2180 tcgctaaatcccgccagacaacatcattggtcaagcaaaacgtagctcttgcattaac 2237
>emb|AJ872069.1| Arabidopsis thaliana mRNA for putative metal-transporting ATPase (hma1 gene) Length = 2488 Score = 85.7 bits (43), Expect = 1e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 267 gggaaggaggtggaggtttaataatggttggtgatggtataaatgatgcaccagctcttg 326 |||||| ||||||||||||||| ||||| || || || || |||||||| |||||||| | Sbjct: 2038 gggaagcaggtggaggtttaattatggtaggagaagggattaatgatgctccagctctag 2097 Query: 327 cagctgcaacagttggtattgttctagcacaacgcgccagtgc 369 ||||||||||||| || |||||||| || ||||| || ||||| Sbjct: 2098 cagctgcaacagtggggattgttcttgctcaacgagcgagtgc 2140 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 435 tcgctaaagctcgccaaacaacttcattggtgaagcaaagcgtagctcttgccttaac 492 |||||||| | ||||| ||||| |||||||| ||||||| |||||||||||| ||||| Sbjct: 2206 tcgctaaatcccgccagacaacatcattggtcaagcaaaacgtagctcttgcattaac 2263
>emb|Z99707.1|ATAP21 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 1 Length = 206420 Score = 79.8 bits (40), Expect = 9e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 274 aggtggaggtttaataatggttggtgatggtataaatgatgcaccagctcttgcagctgc 333 ||||||||||||||| ||||| || || || || |||||||| |||||||| |||||||| Sbjct: 25085 aggtggaggtttaattatggtaggagaagggattaatgatgctccagctctagcagctgc 25144 Query: 334 aacagttggtattgttctagcacaacgcgccagtgc 369 |||||| || |||||||| || ||||| || ||||| Sbjct: 25145 aacagtggggattgttcttgctcaacgagcgagtgc 25180
>emb|AL161591.2|ATCHRIV87 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87 Length = 196339 Score = 79.8 bits (40), Expect = 9e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 274 aggtggaggtttaataatggttggtgatggtataaatgatgcaccagctcttgcagctgc 333 ||||||||||||||| ||||| || || || || |||||||| |||||||| |||||||| Sbjct: 36369 aggtggaggtttaattatggtaggagaagggattaatgatgctccagctctagcagctgc 36310 Query: 334 aacagttggtattgttctagcacaacgcgccagtgc 369 |||||| || |||||||| || ||||| || ||||| Sbjct: 36309 aacagtggggattgttcttgctcaacgagcgagtgc 36274
>emb|AJ580403.1|AHA580403 Arabidopsis halleri subsp. halleri partial mRNA for putative P1B-type metal ATPase (hma1 gene) Length = 577 Score = 73.8 bits (37), Expect = 5e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 267 gggaaggaggtggaggtttaataatggttggtgatggtataaatgatgcaccagctcttg 326 |||||| ||| ||||||||||| ||||| || || || || |||||||| ||||| || | Sbjct: 94 gggaagcaggcggaggtttaattatggtaggagaagggattaatgatgctccagcactag 153 Query: 327 cagctgcaacagttggtattgttctagcacaacgcgccagtgcaacagcggtagctgttg 386 ||||||||||| |||| |||||||| || ||||| || ||||| || ||| | ||||||| Sbjct: 154 cagctgcaacaattgggattgttcttgctcaacgagcgagtgccaccgcgattgctgttg 213 Query: 387 c 387 | Sbjct: 214 c 214 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 435 tcgctaaagctcgccaaacaacttcattggtgaagcaaagcgtagctcttgccttaac 492 |||||||| | ||||| ||||| |||||||| ||||||| |||||||||||| ||||| Sbjct: 262 tcgctaaatcccgccagacaacatcattggtcaagcaaaacgtagctcttgcgttaac 319
>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 Length = 1457619 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 289 aatggttggtgatggtataaatgatgcaccagctcttgc 327 |||||||||||||||||| |||||||||||||||||||| Sbjct: 1383285 aatggttggtgatggtattaatgatgcaccagctcttgc 1383247
>gb|AC152117.2| Pichia stipitis clone JGIAHYZ-5A1, complete sequence Length = 34078 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 290 atggttggtgatggtataaatgatgcaccagctcttgcagctgc 333 ||||||||||||||||| |||||||| |||||||||||| |||| Sbjct: 30466 atggttggtgatggtatcaatgatgctccagctcttgcaactgc 30423
>gb|AF019115.1|AF019115 Glycine max putative cadmium-transporting ATPase (SOYCTA) mRNA, complete cds Length = 1489 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 278 ggaggtttaataatggttggtgatggtataaatgatgcaccagctcttgcagctgcaaca 337 ||||| ||||| ||||||||||| || || |||||||| ||||| || || |||||||| Sbjct: 769 ggaggcttaattatggttggtgaaggcatcaatgatgccccagcactagctgctgcaact 828 Query: 338 gttggtattgttctagcacaacgcgccagtgcaacagcggtagctgttgcggatgt 393 ||||| || ||||| || || || || |||||||| || |||||||||| ||||| Sbjct: 829 gttgggatagttcttgctcaccgtgctagtgcaactgccatagctgttgcagatgt 884
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcaccagctcttgcagctgcaacagttggt 343 |||||||| |||||| | || ||||||||||||||||||||| |||| |||||| Sbjct: 611279 atggttggagatggtgtgaacgatgcaccagctcttgcagcttcaaccgttggt 611332 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcaccagctcttgcagctgcaacagttggt 343 |||||||| |||||| | || ||||||||||||||||||||| |||| |||||| Sbjct: 391877 atggttggagatggtgtgaacgatgcaccagctcttgcagcttcaaccgttggt 391930
>ref|XM_453246.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D04092g predicted mRNA Length = 3459 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcaccagctcttgcagc 330 ||||||||||||||||| |||||||||||||| || ||||| Sbjct: 3010 atggttggtgatggtatcaatgatgcaccagccctagcagc 3050
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 290 atggttggtgatggtataaatgatgcaccagctcttgcagc 330 ||||||||||||||||| |||||||||||||| || ||||| Sbjct: 345115 atggttggtgatggtatcaatgatgcaccagccctagcagc 345075
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 288 taatggttggtgatggtataaatgatgcacc 318 |||||||||||||||| |||||||||||||| Sbjct: 1459508 taatggttggtgatggaataaatgatgcacc 1459538 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 290 atggttggtgatggtataaatgatgcaccagct 322 ||||| ||||||||||| ||||||||||||||| Sbjct: 1703876 atggtaggtgatggtattaatgatgcaccagct 1703844
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 290 atggttggtgatggtataaatgatgcaccagctcttgc 327 ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 1410188 atggttggtgatggtatcaatgatgccccagcccttgc 1410151 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 294 ttggtgatggtataaatgatgcaccagctcttgcagctgc 333 ||||||||||| | |||||||| ||||| |||||| |||| Sbjct: 779189 ttggtgatggtgtcaatgatgccccagcccttgcaactgc 779150
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 289 aatggttggtgatggtataaatgatgcaccagct 322 ||||||||||||||| || ||||||||||||||| Sbjct: 5314775 aatggttggtgatgggattaatgatgcaccagct 5314808
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 285 taataatggttggtgatggtataaatgatgcaccagctcttgcagc 330 |||| |||||||||||||| |||||||||||||||| || ||||| Sbjct: 2716004 taatgatggttggtgatggagtaaatgatgcaccagcactcgcagc 2715959
>emb|AL591981.1| Listeria monocytogenes strain EGD, complete genome, segment 9/12 Length = 347050 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 293 gttggtgatggtataaatgatgcaccagctcttgcagc 330 |||||||||||||| |||||||| || ||||||||||| Sbjct: 176130 gttggtgatggtattaatgatgctccggctcttgcagc 176093
>emb|AL596170.1| Listeria innocua Clip11262 complete genome, segment 8/12 Length = 313450 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 293 gttggtgatggtataaatgatgcaccagctcttgcagc 330 ||||| |||||||| |||||||| |||||||||||||| Sbjct: 193527 gttggcgatggtattaatgatgctccagctcttgcagc 193490
>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome Length = 1796846 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 290 atggttggtgatggtataaatgatgcaccagctcttgc 327 ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 1402543 atggttggtgatggtatcaatgatgccccagcccttgc 1402506 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 294 ttggtgatggtataaatgatgcaccagctcttgcagctgc 333 ||||||||||| | |||||||| ||||| |||||| |||| Sbjct: 772766 ttggtgatggtgtcaatgatgccccagcccttgcaactgc 772727
>ref|XM_470523.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2733 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 289 aatggttggtgatggtataaatgatgcaccagctcttgcagctgc 333 ||||||||| ||||| ||||||||||||||| || | |||||||| Sbjct: 2346 aatggttggggatggaataaatgatgcaccatctttagcagctgc 2390
>gb|AY458645.1| Uncultured bacterium 577 clone EBAC080-L12H07 genomic sequence Length = 35996 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 290 atggttggtgatggtataaatgatgcaccagctcttgcagctgca 334 ||||| |||||||| ||||||||||| ||||| || ||||||||| Sbjct: 8861 atggtaggtgatgggataaatgatgctccagcgctagcagctgca 8817
>dbj|AP003602.1| Nostoc sp. PCC 7120 plasmid pCC7120beta DNA, complete sequence Length = 186614 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 289 aatggttggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||| |||||||||||||| Sbjct: 135862 aatggttggagatggtatcaatgatgcaccagc 135894
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 295 tggtgatggtataaatgatgcaccagctcttgc 327 ||||||||||| ||||||||| ||||||||||| Sbjct: 1813937 tggtgatggtacaaatgatgctccagctcttgc 1813905 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 289 aatggttggtgatggtataaatgatgcaccagc 321 |||||||||||||||||| |||||||| ||||| Sbjct: 340173 aatggttggtgatggtattaatgatgctccagc 340141
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 289 aatggttggtgatggtataaatgatgcaccagc 321 |||||||||||||||||| |||||||| ||||| Sbjct: 876312 aatggttggtgatggtattaatgatgctccagc 876280 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 295 tggtgatggtataaatgatgcaccagctcttgc 327 ||||||||||| ||| ||||| ||||||||||| Sbjct: 1827897 tggtgatggtacaaacgatgctccagctcttgc 1827865
>ref|XM_457803.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C03223g) partial mRNA Length = 3759 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 289 aatggttggtgatggtataaatgatgcaccagctcttgca 328 |||| |||||||||||||||||||| | ||||| |||||| Sbjct: 3318 aatgattggtgatggtataaatgattctccagcacttgca 3357
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 289 aatggttggtgatggtataaatgatgcaccagctcttgca 328 |||| |||||||||||||||||||| | ||||| |||||| Sbjct: 259240 aatgattggtgatggtataaatgattctccagcacttgca 259201
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcaccagc 321 |||||||||||||| || |||||||||||||| Sbjct: 1924048 atggttggtgatgggattaatgatgcaccagc 1924079
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome Length = 1767403 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 289 aatggttggtgatggtataaatgatgcaccagctcttgca 328 |||||| || ||||| ||||||||||||||||| |||||| Sbjct: 137161 aatggtgggagatggaataaatgatgcaccagcacttgca 137200 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 tggtgatggtataaatgatgcacc 318 |||||||||| ||||||||||||| Sbjct: 1374760 tggtgatggtgtaaatgatgcacc 1374783 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcaccagc 321 |||||||||||||| || |||||||| ||||| Sbjct: 792038 atggttggtgatggaattaatgatgctccagc 792069
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 289 aatggttggtgatggtataaatgatgcaccagctcttgca 328 ||||||||| ||||| ||||||||||| ||||| |||||| Sbjct: 3506732 aatggttggagatggaataaatgatgctccagcacttgca 3506693
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 289 aatggttggtgatggtataaatgatgcaccagctcttgca 328 ||||||||||||||| || |||||||| || ||||||||| Sbjct: 689435 aatggttggtgatggaattaatgatgctccggctcttgca 689474 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 293 gttggtgatggtataaatgatgcaccagctcttgc 327 ||||||||||| || |||||||| ||||||||||| Sbjct: 1908505 gttggtgatggcattaatgatgctccagctcttgc 1908471 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagctct 324 ||||||||| ||||||||||||| ||||| Sbjct: 847084 ggtgatggtgtaaatgatgcaccggctct 847112
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 289 aatggttggtgatggtataaatgatgcaccagctcttgc 327 ||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 3559366 aatggttggagatggaataaatgatgctccagcacttgc 3559328
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 289 aatggttggtgatggtataaatgatgcaccagctcttgc 327 ||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 3531327 aatggttggagatggaataaatgatgctccagcacttgc 3531289
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 289 aatggttggtgatggtataaatgatgcaccagctcttgc 327 ||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 3531901 aatggttggagatggaataaatgatgctccagcacttgc 3531863
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 289 aatggttggtgatggtataaatgatgcaccagctcttgc 327 ||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 3612726 aatggttggagatggaataaatgatgctccagcacttgc 3612688
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 290 atggttggtgatggtataaatgatgcaccag 320 ||||||||||||||||| |||||||| |||| Sbjct: 2024257 atggttggtgatggtattaatgatgcgccag 2024227
>emb|CR378672.1| Photobacterium profundum SS9; segment 10/12 Length = 348526 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcaccagctct 324 ||||||||||||||||| || ||||| |||||||| Sbjct: 138820 atggttggtgatggtattaacgatgccccagctct 138854
>gb|AF074400.1|AF074400 Schistosoma mansoni calcium ATPase 2 (SMA2) mRNA, complete cds Length = 4148 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 295 tggtgatggtataaatgatgcaccagc 321 |||||||||| |||||||||||||||| Sbjct: 2256 tggtgatggtgtaaatgatgcaccagc 2282
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 289 aatggttggtgatggtataaatgatgcaccagctcttgc 327 ||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 3531200 aatggttggagatggaataaatgatgctccagcacttgc 3531162
>ref|XM_641004.1| Dictyostelium discoideum hypothetical protein (DDB0190385), partial mRNA Length = 4161 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 288 taatggttggtgatggtataaatgat 313 ||||||||||||||||| |||||||| Sbjct: 3803 taatggttggtgatggtgtaaatgat 3828
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 285 taataatggttggtgatggtataaatgatgcaccagctcttgcagc 330 |||| |||||||||||||| |||||||||| ||||| || ||||| Sbjct: 1105233 taatgatggttggtgatggagtaaatgatgctccagcactcgcagc 1105278
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 290 atggttggtgatggtataaatgatgc 315 ||||||||||||||||| |||||||| Sbjct: 1780528 atggttggtgatggtatcaatgatgc 1780503
>gb|AY259130.1| Staphylococcus aureus ATPase copper transport and putative copper oxidase genes, complete cds Length = 3852 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgc 315 ||||||||||||||||| |||||||| Sbjct: 1838 atggttggtgatggtatcaatgatgc 1863
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 292 ggttggtgatggtataaatgatgcaccagctcttgcagctgc 333 |||||| ||||| ||||||||||||||| || | |||||||| Sbjct: 4102652 ggttggggatggaataaatgatgcaccatctttagcagctgc 4102611
>ref|XM_736431.1| Plasmodium chabaudi chabaudi calcium-transporting ATPase, (PC301192.00.0) partial mRNA Length = 2202 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagctctt 325 ||||||||| ||||||||||||| |||||| Sbjct: 1984 ggtgatggtgtaaatgatgcacctgctctt 2013
>emb|X71765.1|PFCAATPAS P. falciparum gene for Ca2+ - ATPase Length = 5477 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||||||||||| Sbjct: 2883 ggtgatggtgtaaatgatgcaccagc 2908
>emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2 Length = 384550 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 296 ggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||||||||||| Sbjct: 200234 ggtgatggtgtaaatgatgcaccagc 200209
>gb|AF480912.1| Legionella pneumophila clone pA37F putative lipoprotein (plpA), putative copper efflux ATPase (copA2), chemiosmotic efflux system C protein A (cecA), chemiosmotic efflux system C protein B (cecB), chemiosmotic efflux system C protein C (cecC), putative copper efflux ATPase (copA1), chemiosmotic efflux system B protein A (cebA), chemiosmotic efflux system B protein B (cebB), chemiosmotic efflux system B protein C (cebC), putative cation efflux transporter (ctpA), putative cadmium efflux ATPase (cadA1), and cadA2 genes, complete cds; and unknown genes Length = 38800 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 285 taataatggttggtgatggtataaatgatgcaccagctcttgcagc 330 |||| |||||||||||||| |||||||||| ||||| || ||||| Sbjct: 34021 taatgatggttggtgatggagtaaatgatgctccagcactcgcagc 33976
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 292 ggttggtgatggtataaatgatgcaccagctcttgcagctgc 333 |||||| ||||| ||||||||||||||| || | |||||||| Sbjct: 4102761 ggttggggatggaataaatgatgcaccatctttagcagctgc 4102720
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 292 ggttggtgatggtataaatgatgcaccagctcttgcagctgc 333 |||||| ||||| ||||||||||||||| || | |||||||| Sbjct: 3289 ggttggggatggaataaatgatgcaccatctttagcagctgc 3248
>gb|DQ171938.1| Plasmodium chabaudi chabaudi calcium-dependent ATPase (atp6) gene, complete cds Length = 8714 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagctctt 325 ||||||||| ||||||||||||| |||||| Sbjct: 6465 ggtgatggtgtaaatgatgcacctgctctt 6494
>dbj|AB122148.1| Plasmodium reichenowi serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds Length = 4063 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||||||||||| Sbjct: 2844 ggtgatggtgtaaatgatgcaccagc 2869
>dbj|AB121060.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:Thai 838 Length = 4049 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||||||||||| Sbjct: 2811 ggtgatggtgtaaatgatgcaccagc 2836
>dbj|AB121059.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:7G8 Length = 4036 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||||||||||| Sbjct: 2811 ggtgatggtgtaaatgatgcaccagc 2836
>dbj|AB121058.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:RO33 Length = 4045 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||||||||||| Sbjct: 2811 ggtgatggtgtaaatgatgcaccagc 2836
>dbj|AB121057.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:MAD20 Length = 4060 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||||||||||| Sbjct: 2811 ggtgatggtgtaaatgatgcaccagc 2836
>dbj|AB121056.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:T9/96 Length = 4068 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||||||||||| Sbjct: 2811 ggtgatggtgtaaatgatgcaccagc 2836
>dbj|AB121055.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:T9/102 Length = 4049 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||||||||||| Sbjct: 2811 ggtgatggtgtaaatgatgcaccagc 2836
>dbj|AB121054.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:T9/94 Length = 4044 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||||||||||| Sbjct: 2811 ggtgatggtgtaaatgatgcaccagc 2836
>dbj|AB121053.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:Dd2 Length = 4057 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||||||||||| Sbjct: 2811 ggtgatggtgtaaatgatgcaccagc 2836
>dbj|AB121052.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:HB3 Length = 4037 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||||||||||| Sbjct: 2808 ggtgatggtgtaaatgatgcaccagc 2833
>dbj|AB121051.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:K1 Length = 4049 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||||||||||| Sbjct: 2811 ggtgatggtgtaaatgatgcaccagc 2836
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 290 atggttggtgatggtataaatgatgc 315 |||||||||||||| ||||||||||| Sbjct: 686605 atggttggtgatggaataaatgatgc 686580
>emb|AJ532679.1|PFA532679 Synthetic construct mRNA for Plasmodium falciparum calcium pump (atpase6 gene) Length = 3695 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagc 321 ||||||||| |||||||||||||||| Sbjct: 2741 ggtgatggtgtaaatgatgcaccagc 2766
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgc 315 ||||||||||||||||| |||||||| Sbjct: 756587 atggttggtgatggtatcaatgatgc 756612 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcacc 318 ||||||||||| ||| ||||||||||||| Sbjct: 2726282 atggttggtgacggtgtaaatgatgcacc 2726310
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 293 gttggtgatggtataaatgatgcacc 318 |||||||||||||| ||||||||||| Sbjct: 1379811 gttggtgatggtatgaatgatgcacc 1379836 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcacc 318 |||||||||||||| || ||||||||||| Sbjct: 715170 atggttggtgatggcattaatgatgcacc 715198
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 289 aatggttggtgatggtataaatgatgcacc 318 ||||||||| || ||||||||||||||||| Sbjct: 442211 aatggttggagacggtataaatgatgcacc 442182
>emb|CR933820.6| Zebrafish DNA sequence from clone DKEY-183J2 in linkage group 11, complete sequence Length = 230267 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 tgaagttatatataccttaaga 124 |||||||||||||||||||||| Sbjct: 111740 tgaagttatatataccttaaga 111761
>gb|U42410.1|PMU42410 Proteus mirabilis heavy-metal transporting P-type ATPase gene, partial cds Length = 2487 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 299 gatggtataaatgatgcaccagctcttgca 328 |||||||| |||||||| |||||||||||| Sbjct: 2134 gatggtatcaatgatgccccagctcttgca 2163
>gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosome 14, complete sequence Length = 186860 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 512 cttccttctgtcttaggatttcttc 536 ||||||||||| ||||||||||||| Sbjct: 88986 cttccttctgtgttaggatttcttc 89010
>emb|CR855371.13| Chicken DNA sequence from clone WAG-45A21, complete sequence Length = 104062 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 atgcaccagctcttgcagctg 332 ||||||||||||||||||||| Sbjct: 101609 atgcaccagctcttgcagctg 101589
>ref|XM_672242.1| Plasmodium berghei strain ANKA calcium-transporting ATPase, (PB000675.00.0) partial mRNA Length = 3360 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 296 ggtgatggtataaatgatgcaccagctct 324 ||||||||| ||||||||||||| ||||| Sbjct: 2407 ggtgatggtgtaaatgatgcacctgctct 2435
>gb|AC135229.31| Medicago truncatula clone mth2-7m14, complete sequence Length = 111679 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 289 aatggttggtgatggtataaatgatgcaccagc 321 |||||| || ||||||||||||||| ||||||| Sbjct: 82810 aatggtaggagatggtataaatgattcaccagc 82778
>emb|AL691449.21| Human DNA sequence from clone RP11-558F24 on chromosome 1 Contains two novel genes, a ribosomal protein L26-like 1 pseudogene (RPL26L1), the PIK3CD gene for phosphoinositide-3-kinase, catalytic, delta polypeptide, the 3' end of the CLSTN1 gene for calsyntenin 1 and a CpG island, complete sequence Length = 163934 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 aggatttcttcctctttggtt 546 ||||||||||||||||||||| Sbjct: 43832 aggatttcttcctctttggtt 43852
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 289 aatggttggtgatggtataaatgatgcaccagc 321 |||||| |||||||| || |||||||||||||| Sbjct: 2357781 aatggtgggtgatggcatcaatgatgcaccagc 2357813
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcacc 318 ||||||||||| ||| ||||||||||||| Sbjct: 2623320 atggttggtgacggtgtaaatgatgcacc 2623348
>emb|AJ001437.1|PMPPAA Proteus mirabilis ppaA gene and orf1 Length = 2888 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcacc 318 ||||| ||||||||||| ||||||||||| Sbjct: 2289 atggtgggtgatggtattaatgatgcacc 2317
>emb|AL928605.22| Mouse DNA sequence from clone RP23-139P14 on chromosome 4, complete sequence Length = 209024 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 taatttatgtgtggtgccatt 429 ||||||||||||||||||||| Sbjct: 175611 taatttatgtgtggtgccatt 175591
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcacc 318 ||||||||||| ||| ||||||||||||| Sbjct: 2704846 atggttggtgacggtgtaaatgatgcacc 2704874
>gb|AC074026.14| Staphylococcus aureus clone sabac-16, complete sequence Length = 52695 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcacc 318 ||||||||||| ||| ||||||||||||| Sbjct: 15893 atggttggtgacggtgtaaatgatgcacc 15921
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcacc 318 ||||||||||| ||| ||||||||||||| Sbjct: 2635295 atggttggtgacggtgtaaatgatgcacc 2635323
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcacc 318 ||||||||||| ||| ||||||||||||| Sbjct: 2647239 atggttggtgacggtgtaaatgatgcacc 2647267
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcacc 318 ||||||||||| ||| ||||||||||||| Sbjct: 2698600 atggttggtgacggtgtaaatgatgcacc 2698628
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcacc 318 ||||||||||| ||| ||||||||||||| Sbjct: 2643962 atggttggtgacggtgtaaatgatgcacc 2643990
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcacc 318 ||||||||||| ||| ||||||||||||| Sbjct: 2634420 atggttggtgacggtgtaaatgatgcacc 2634448
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcacc 318 ||||||||||| ||| ||||||||||||| Sbjct: 2572046 atggttggtgacggtgtaaatgatgcacc 2572074
>gb|BC009143.1| Mus musculus trans-golgi network protein, mRNA (cDNA clone MGC:11627 IMAGE:3157708), complete cds Length = 1704 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 669 acttctctttaaagccagag 688
>ref|NM_009443.3| Mus musculus trans-golgi network protein (Tgoln1), mRNA Length = 5025 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 934 acttctctttaaagccagag 953
>gb|AE006319.1| Lactococcus lactis subsp. lactis IL1403 section 81 of 218 of the complete genome Length = 10302 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 294 ttggtgatggtataaatgatgcaccagctcttgcagctgc 333 ||||||||||| | |||||| | |||||||||||| |||| Sbjct: 4042 ttggtgatggtgtcaatgattccccagctcttgcaactgc 4003
>ref|XM_715668.1| Candida albicans SC5314 copper-transporting ATPase (CaO19_11803), mRNA Length = 3615 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 294 ttggtgatggtataaatgatgcaccagc 321 ||||||| |||||||||||||| ||||| Sbjct: 2993 ttggtgacggtataaatgatgccccagc 3020
>ref|XM_715541.1| Candida albicans SC5314 copper-transporting ATPase (CaO19_4328), mRNA Length = 3615 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 294 ttggtgatggtataaatgatgcaccagc 321 ||||||| |||||||||||||| ||||| Sbjct: 2993 ttggtgacggtataaatgatgccccagc 3020
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 gtattgtttttgctgcactt 514 |||||||||||||||||||| Sbjct: 1273926 gtattgtttttgctgcactt 1273907
>gb|AY033085.1| Candida albicans copper-transporting P-type ATPase (CCC2) gene, CCC2-b allele, complete cds Length = 4000 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 294 ttggtgatggtataaatgatgcaccagc 321 ||||||| |||||||||||||| ||||| Sbjct: 3244 ttggtgacggtataaatgatgccccagc 3271
>gb|AY033084.1| Candida albicans copper-transporting P-type ATPase (CCC2) gene, CCC2-a allele, complete cds Length = 4000 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 294 ttggtgatggtataaatgatgcaccagc 321 ||||||| |||||||||||||| ||||| Sbjct: 3244 ttggtgacggtataaatgatgccccagc 3271
>gb|BC098512.1| Rattus norvegicus trans-golgi network protein 2, mRNA (cDNA clone MGC:108592 IMAGE:7382894), complete cds Length = 4744 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 681 acttctctttaaagccagag 700
>gb|AC107368.11| Mus musculus chromosome 3, clone RP23-243N8, complete sequence Length = 253744 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 524 ttaggatttcttcctctttggttg 547 ||||||||||| |||||||||||| Sbjct: 55256 ttaggatttctacctctttggttg 55279
>gb|AC127678.9| Mus musculus BAC clone RP24-233M12 from chromosome 18, complete sequence Length = 157430 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 agggaaggaggtggaggttt 285 |||||||||||||||||||| Sbjct: 120153 agggaaggaggtggaggttt 120172
>gb|AC125039.4| Mus musculus BAC clone RP23-335C3 from chromosome 6, complete sequence Length = 222535 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 91209 acttctctttaaagccagag 91190
>gb|AC122280.4| Mus musculus BAC clone RP23-239I12 from 17, complete sequence Length = 238767 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 ttccttctgtcttaggattt 532 |||||||||||||||||||| Sbjct: 86710 ttccttctgtcttaggattt 86729
>gb|AC122803.4| Mus musculus BAC clone RP23-292K9 from 17, complete sequence Length = 149990 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 agtgttctgcatttggtcctgaat 27 ||||||||||||||||| |||||| Sbjct: 133107 agtgttctgcatttggttctgaat 133084
>emb|CT010269.1| Mus musculus full open reading frame cDNA clone RZPDo836F1051D for gene Tgoln1, Trans-golgi network protein; complete cds, incl. stopcodon Length = 1062 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 656 acttctctttaaagccagag 675
>gb|AC122140.2| Mus musculus BAC clone RP24-270F2 from 17, complete sequence Length = 200761 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 agtgttctgcatttggtcctgaat 27 ||||||||||||||||| |||||| Sbjct: 1943 agtgttctgcatttggttctgaat 1920
>ref|XM_763879.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_61_1957_21219) partial mRNA Length = 19263 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gccagtgcaacagcggtagc 381 |||||||||||||||||||| Sbjct: 16711 gccagtgcaacagcggtagc 16730
>ref|NM_138840.2| Rattus norvegicus trans-golgi network protein 2 (Tgoln2), mRNA Length = 4744 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 681 acttctctttaaagccagag 700
>gb|AC144729.29| Medicago truncatula clone mth2-15j6, complete sequence Length = 113550 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 tatatataccttaagagaaa 128 |||||||||||||||||||| Sbjct: 74200 tatatataccttaagagaaa 74219
>gb|AC087262.2| Rattus norvegicus strain Brown Norway clone RP31-151E23, complete sequence Length = 132809 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 tccttctgtcttaggatttc 533 |||||||||||||||||||| Sbjct: 38054 tccttctgtcttaggatttc 38073
>emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on chromosome 13 Contains the 3' end of a novel gene (FLJ22153) and the 3' end of the gene for a novel protein (ortholog of rat putative four repeat ion channel), complete sequence Length = 181311 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aagggaaggaggtggaggtt 284 |||||||||||||||||||| Sbjct: 19753 aagggaaggaggtggaggtt 19772
>emb|AL121916.14|HSJ189G13 Human DNA sequence from clone RP1-189G13 on chromosome 20 Contains the RPL7AL2 gene for ribosomal protein L7a like 2 (pseudogene) and part of a ribosomal protein S4 pseudogene, complete sequence Length = 100167 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 tataccttaagagaaaaggc 132 |||||||||||||||||||| Sbjct: 48333 tataccttaagagaaaaggc 48352
>gb|AC157926.4| Mus musculus chromosome 3, clone RP24-61J18, complete sequence Length = 231722 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 524 ttaggatttcttcctctttggttg 547 ||||||||||| |||||||||||| Sbjct: 56993 ttaggatttctacctctttggttg 56970
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 290 atggttggtgatggtataaatgatgcaccagc 321 |||||||||||||| || |||||||| ||||| Sbjct: 1974137 atggttggtgatggcattaatgatgcgccagc 1974106
>emb|CR378666.1| Photobacterium profundum SS9; segment 4/12 Length = 348313 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgatgcaccagc 321 ||||| ||||||||||| |||||||| ||||| Sbjct: 331507 atggtcggtgatggtattaatgatgccccagc 331538
>emb|BX957222.1| Methanococcus maripaludis S2 complete genome; segment 4/5 Length = 349607 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 294 ttggtgatggtataaatgatgcaccagctctt 325 |||| ||||| ||||||||||| ||||||||| Sbjct: 106695 ttggggatggaataaatgatgccccagctctt 106726
>emb|AL022299.1|SPBC29A3 S.pombe chromosome II cosmid c29A3 Length = 42770 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgat 313 ||||| |||||||||||||||||| Sbjct: 3429 atggtaggtgatggtataaatgat 3452
>gb|BC098958.1| Xenopus laevis hypothetical LOC495046, mRNA (cDNA clone MGC:114626 IMAGE:4970034), complete cds Length = 5009 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 tggtgatggtataaatgatgcacc 318 |||||||||| ||||||||||||| Sbjct: 2555 tggtgatggtgtaaatgatgcacc 2578
>dbj|AK133559.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330402M17 product:Trans-Golgi network integral membrane protein 1 precursor (TGN38A), full insert sequence Length = 2895 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 682 acttctctttaaagccagag 701
>dbj|AK145212.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930020M22 product:Trans-Golgi network integral membrane protein 2 precursor (TGN38B), full insert sequence Length = 1701 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 699 acttctctttaaagccagag 718
>gb|AC083760.5| Homo sapiens chromosome 18, clone CTD-388D15, complete sequence Length = 109851 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 agtaaaagcagtttcaaggg 269 |||||||||||||||||||| Sbjct: 74498 agtaaaagcagtttcaaggg 74517
>dbj|AK162574.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630019P09 product:Trans-Golgi network integral membrane protein 1 precursor (TGN38A), full insert sequence Length = 1993 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 684 acttctctttaaagccagag 703
>dbj|AK161242.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4921505F24 product:Trans-Golgi network integral membrane protein 1 precursor (TGN38A), full insert sequence Length = 4767 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 667 acttctctttaaagccagag 686
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tgcaccagctcttgcagctg 332 |||||||||||||||||||| Sbjct: 1418232 tgcaccagctcttgcagctg 1418251
>ref|NM_001021733.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC29A3.01), partial mRNA Length = 2715 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 atggttggtgatggtataaatgat 313 ||||| |||||||||||||||||| Sbjct: 2215 atggtaggtgatggtataaatgat 2238
>dbj|AK076586.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4921524L19 product:Trans-Golgi network integral membrane protein 1 precursor (TGN38A), full insert sequence Length = 2972 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 935 acttctctttaaagccagag 954
>dbj|AK041302.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530098D06 product:Trans-Golgi network integral membrane protein 1 precursor (TGN38A), full insert sequence Length = 2250 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 684 acttctctttaaagccagag 703
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tgtatgtgaagttatatata 116 |||||||||||||||||||| Sbjct: 12054952 tgtatgtgaagttatatata 12054971
>gb|AC159136.7| Mus musculus 10 BAC RP23-58L22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207997 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 cttctgtcttaggatttctt 535 |||||||||||||||||||| Sbjct: 166367 cttctgtcttaggatttctt 166386
>gb|AC131094.3| Homo sapiens BAC clone RP11-598D14 from 4, complete sequence Length = 72143 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 tgcatttggtcctgaatttg 30 |||||||||||||||||||| Sbjct: 18646 tgcatttggtcctgaatttg 18627
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 tggtgatggtataaatgatgcacc 318 |||||||||| ||||||||||||| Sbjct: 429048 tggtgatggtgtaaatgatgcacc 429071
>dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0024C06 Length = 177529 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tgtatgtgaagttatatata 116 |||||||||||||||||||| Sbjct: 106447 tgtatgtgaagttatatata 106466
>dbj|AP005843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0024C16 Length = 137779 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tgtatgtgaagttatatata 116 |||||||||||||||||||| Sbjct: 52086 tgtatgtgaagttatatata 52105
>emb|X78322.1|NVB24P N.viridescens mRNA for oocyte nuclear protein Length = 2587 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gttggtgatggtataaatga 312 |||||||||||||||||||| Sbjct: 1991 gttggtgatggtataaatga 2010
>ref|NM_209843.1| Eremothecium gossypii ADR395Cp (ADR395C), mRNA Length = 1443 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tgcaccagctcttgcagctg 332 |||||||||||||||||||| Sbjct: 224 tgcaccagctcttgcagctg 205
>gb|AC153555.5| Mus musculus 10 BAC RP23-193J20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208079 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 cttctgtcttaggatttctt 535 |||||||||||||||||||| Sbjct: 38621 cttctgtcttaggatttctt 38640
>emb|X64600.1|RNTGN41 R.norvegicus mRNA for the trans Golgi network specific integral membrane protein TGN41 Length = 1200 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 679 acttctctttaaagccagag 698
>emb|X53565.1|RNTGN38 Rat mRNA for trans-Golgi network integral membrane protein TGN38 Length = 2750 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 679 acttctctttaaagccagag 698
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 290 atggttggtgatggtataaatgatgcaccagc 321 |||||||| ||||| || |||||||||||||| Sbjct: 153358 atggttggagatggaattaatgatgcaccagc 153327
>gb|AE017195.1| Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence Length = 208369 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 aatgatgcaccagctcttgc 327 |||||||||||||||||||| Sbjct: 159343 aatgatgcaccagctcttgc 159324
>emb|AL772277.13| Mouse DNA sequence from clone RP23-416H4 on chromosome 4, complete sequence Length = 167123 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 atatataccttaagagaaaaggct 133 ||||| |||||||||||||||||| Sbjct: 15739 atataaaccttaagagaaaaggct 15716
>ref|NM_009444.1| Mus musculus trans-golgi network protein 2 (Tgoln2), mRNA Length = 2265 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 712 acttctctttaaagccagag 731
>emb|CR956621.10| Pig DNA sequence from clone CH242-201E3 on chromosome 17, complete sequence Length = 83594 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tttcaagggaaggaggtgga 280 |||||||||||||||||||| Sbjct: 1712 tttcaagggaaggaggtgga 1693
>emb|CR956361.4| Pig DNA sequence from clone CH242-247A17 on chromosome 17, complete sequence Length = 122522 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tttcaagggaaggaggtgga 280 |||||||||||||||||||| Sbjct: 122234 tttcaagggaaggaggtgga 122215
>dbj|D50032.1|MUSTGN38B Mouse mRNA for TGN38B, complete cds Length = 2265 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 712 acttctctttaaagccagag 731
>dbj|D50031.1|MUSTGN38A Mouse mRNA for TGN38A, complete cds Length = 1673 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 acttctctttaaagccagag 235 |||||||||||||||||||| Sbjct: 682 acttctctttaaagccagag 701
>dbj|AP001965.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2291N16, complete sequence Length = 89421 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 501 tttttgctgcacttccttctgtcttagg 528 ||||||||||| |||||| ||||||||| Sbjct: 2674 tttttgctgcaattccttttgtcttagg 2647
>dbj|AP001870.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2206F6, complete sequence Length = 114285 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 501 tttttgctgcacttccttctgtcttagg 528 ||||||||||| |||||| ||||||||| Sbjct: 53055 tttttgctgcaattccttttgtcttagg 53082
>dbj|AB016236.1| Lactococcus lactis bv. diacetylactis DNA, citrate permease gene Length = 3638 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 294 ttggtgatggtataaatgatgcaccagctcttgcagctgc 333 ||||||||||| | |||||| | |||||||||||| |||| Sbjct: 3027 ttggtgatggtgtcaatgattccccagctcttgcaactgc 2988 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,011,995 Number of Sequences: 3902068 Number of extensions: 6011995 Number of successful extensions: 163102 Number of sequences better than 10.0: 151 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 161725 Number of HSP's gapped (non-prelim): 1374 length of query: 562 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 539 effective length of database: 17,143,297,704 effective search space: 9240237462456 effective search space used: 9240237462456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
