Clone Information

BLAST Search Result

Clone Name	bags22g20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS19_ORYSA (P40978) 40S ribosomal protein S19	261	1e-69
2	RS193_ARATH (Q9FNP8) 40S ribosomal protein S19-3	216	4e-56
3	RS192_ARATH (Q9LF30) 40S ribosomal protein S19-2	214	1e-55
4	RS191_ARATH (Q9SGA6) 40S ribosomal protein S19-1	212	7e-55
5	RS19_MYAAR (Q94613) 40S ribosomal protein S19	177	2e-44
6	RS19_MYXGL (Q9Y0H3) 40S ribosomal protein S19	165	8e-41
7	RS19_BRABE (Q8T5Z4) 40S ribosomal protein S19	164	1e-40
8	RS19_RAT (P17074) 40S ribosomal protein S19	164	2e-40
9	RS19_MOUSE (Q9CZX8) 40S ribosomal protein S19	164	2e-40
10	RS19_GILMI (Q9DFR5) 40S ribosomal protein S19	163	3e-40
11	RS19_ICTPU (Q90YQ4) 40S ribosomal protein S19	162	9e-40
12	RS19_PONPY (Q5R8M9) 40S ribosomal protein S19	162	9e-40
13	RS19_HUMAN (P39019) 40S ribosomal protein S19	162	9e-40
14	RS19_PIG (Q29308) 40S ribosomal protein S19 (Fragment)	158	1e-38
15	RS19_AEQIR (Q8ITC3) 40S ribosomal protein S19	158	1e-38
16	RS19_PAGMA (P61155) 40S ribosomal protein S19	157	2e-38
17	RS19_EMENI (P27073) 40S ribosomal protein S19 (S16)	155	8e-38
18	RS19B_SCHPO (P79016) 40S ribosomal protein S19-B (S16-B)	154	2e-37
19	RS19A_SCHPO (P58234) 40S ribosomal protein S19-A (S16-A)	153	3e-37
20	RS19B_YEAST (P07281) 40S ribosomal protein S19-B (S16B) (YS16) (...	142	7e-34
21	RS19A_YEAST (P07280) 40S ribosomal protein S19-A (S16A) (YS16) (...	142	7e-34
22	RS19A_DROME (P39018) 40S ribosomal protein S19a	142	7e-34
23	RS19S_ASCSU (P39698) 40S ribosomal protein S19S	141	1e-33
24	RS19_ENTHI (O15631) 40S ribosomal protein S19	136	4e-32
25	RS19B_DROME (Q7KS38) 40S ribosomal protein S19b	131	1e-30
26	RS19_CAEEL (O18650) 40S ribosomal protein S19	131	1e-30
27	RS19G_ASCSU (P24494) 40S ribosomal protein S19G (Eliminated prot...	131	1e-30
28	RS19E_METJA (P54057) 30S ribosomal protein S19e	108	9e-24
29	RS19E_METTH (O27653) 30S ribosomal protein S19e	107	3e-23
30	RS19E_AERPE (Q9YD22) 30S ribosomal protein S19e	104	2e-22
31	RS19E_ARCFU (O28210) 30S ribosomal protein S19e	103	4e-22
32	RS19E_PYRHO (O59041) 30S ribosomal protein S19e	102	1e-21
33	RS19E_THEVO (Q97CU4) 30S ribosomal protein S19e	87	3e-17
34	RS19E_HALMA (P19952) 30S ribosomal protein S19e (HS12) (E1.3)	85	1e-16
35	RS19E_THEAC (Q9HM21) 30S ribosomal protein S19e	83	7e-16
36	LCE1A_HUMAN (Q5T7P2) Late cornified envelope protein 1A (Late en...	32	1.8
37	ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein ...	31	2.3
38	STP2_CANFA (O77645) Nuclear transition protein 2 (TP-2) (TP2)	31	3.0
39	TRPF_SACKU (Q5XQP9) N-(5'-phosphoribosyl)anthranilate isomerase ...	31	3.0
40	LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late en...	30	4.0
41	LCE1B_HUMAN (Q5T7P3) Late cornified envelope protein 1B (Late en...	30	4.0
42	LCE1F_HUMAN (Q5T754) Late cornified envelope protein 1F (Late en...	30	5.2
43	HMD_METVO (Q50840) 5,10-methenyltetrahydromethanopterin hydrogen...	30	5.2
44	RPOC_SYMTH (Q67JT4) DNA-directed RNA polymerase beta' chain (EC ...	30	6.7
45	GAL1_PYRKO (Q5JEK8) Galactokinase (EC 2.7.1.6) (Galactose kinase)	29	8.8
46	YDHC_BACSU (O05494) Hypothetical transcriptional regulator ydhC	29	8.8
47	LCE1E_HUMAN (Q5T753) Late cornified envelope protein 1E (Late en...	29	8.8
48	GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outg...	29	8.8
49	PPGK_MYCLE (Q49988) Polyphosphate glucokinase (EC 2.7.1.63) (Pol...	29	8.8
50	DDL_MYCSM (Q9ZGN0) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-a...	29	8.8
51	CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displace...	29	8.8

>RS19_ORYSA (P40978) 40S ribosomal protein S19|
          Length = 146

 Score =  261 bits (667), Expect = 1e-69
 Identities = 125/133 (93%), Positives = 129/133 (96%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPP D DWYY RAAS+ARKIY
Sbjct: 9   VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIY 68

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LRQGIG+GGFQKIYGGRQRNGSRPPHFCKSSGA+SRNILQ+LQKMGIIDVDPKGGRLITS
Sbjct: 69  LRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITS 128

Query: 408 QGRRDLDQVAGTV 446
           QGRRDLDQVAG V
Sbjct: 129 QGRRDLDQVAGRV 141

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>RS193_ARATH (Q9FNP8) 40S ribosomal protein S19-3|
          Length = 143

 Score =  216 bits (550), Expect = 4e-56
 Identities = 100/135 (74%), Positives = 117/135 (86%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDV+PHEFVKAY+AHLKRSGK+ELP W DIVKT + KEL P D DWYYIRAASMARK+Y
Sbjct: 7   VKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVY 66

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LR G+G+G F++IYGG +RNGSRPPHFCKSSG V+R+ILQ+LQ M I+D+D KGGR ITS
Sbjct: 67  LRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITS 126

Query: 408 QGRRDLDQVAGTVPA 452
            G+RDLDQVAG + A
Sbjct: 127 SGQRDLDQVAGRIAA 141

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>RS192_ARATH (Q9LF30) 40S ribosomal protein S19-2|
          Length = 143

 Score =  214 bits (545), Expect = 1e-55
 Identities = 98/136 (72%), Positives = 118/136 (86%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDV+PH+FVKAY++HLKRSGK+ELP W DIVKT R KEL P D DWYYIRAASMARKIY
Sbjct: 7   VKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIY 66

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LR G+G+G F++IYGG +RNGSRPPHFCKSSG ++R+ILQ+L+ M I+++D KGGR ITS
Sbjct: 67  LRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKGGRRITS 126

Query: 408 QGRRDLDQVAGTVPAE 455
            G+RDLDQVAG + AE
Sbjct: 127 SGQRDLDQVAGRIAAE 142

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>RS191_ARATH (Q9SGA6) 40S ribosomal protein S19-1|
          Length = 143

 Score =  212 bits (539), Expect = 7e-55
 Identities = 95/136 (69%), Positives = 117/136 (86%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDV+PH+FVKAY++HLKRSGK+ELP W DIVKT + KEL P D DWYYIRAASMARK+Y
Sbjct: 7   VKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVY 66

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LR G+G+G F++IYGG +RNGSRPPHFCKSSG ++R+ILQ+L+ M I+++D KGGR ITS
Sbjct: 67  LRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITS 126

Query: 408 QGRRDLDQVAGTVPAE 455
            G+RDLDQVAG +  E
Sbjct: 127 SGQRDLDQVAGRIAVE 142

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>RS19_MYAAR (Q94613) 40S ribosomal protein S19|
          Length = 149

 Score =  177 bits (449), Expect = 2e-44
 Identities = 77/133 (57%), Positives = 105/133 (78%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDV+ HEF +A++A LK+SGKM++PEW D VKT  FKEL P + DWY+IRAAS+ R +Y
Sbjct: 5   VKDVSSHEFTRAFAAFLKKSGKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHLY 64

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           +R   GIG F+KIYGGR+R G+ P HFCK++G++SR +LQ L+ + I++ DP GGR +TS
Sbjct: 65  IRSPAGIGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNGGRRLTS 124

Query: 408 QGRRDLDQVAGTV 446
           QGRRDLD++A  +
Sbjct: 125 QGRRDLDRIAAQI 137

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>RS19_MYXGL (Q9Y0H3) 40S ribosomal protein S19|
          Length = 145

 Score =  165 bits (418), Expect = 8e-41
 Identities = 74/133 (55%), Positives = 100/133 (75%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDVN  EFVKA +A  K+SGK++ P+WVD VK  + KEL P D DWYYIR AS+AR +Y
Sbjct: 6   VKDVNQQEFVKALAAFFKKSGKLKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHLY 65

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           +R G+G+G   KIYGGRQRNG+RP H+ + S  V+R +LQ L+ + +++ DP GGR +TS
Sbjct: 66  MRGGVGVGAMTKIYGGRQRNGTRPSHYSRGSRNVARKVLQSLEMLKMVEKDPNGGRRLTS 125

Query: 408 QGRRDLDQVAGTV 446
            G+RD+D++AG V
Sbjct: 126 IGQRDMDRIAGQV 138

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>RS19_BRABE (Q8T5Z4) 40S ribosomal protein S19|
          Length = 147

 Score =  164 bits (416), Expect = 1e-40
 Identities = 77/133 (57%), Positives = 102/133 (76%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDVN  EFVKA++A LK+SGK++LPEWVD+VKTA  KEL P D DW+Y+RAAS AR +Y
Sbjct: 7   VKDVNQQEFVKAFAAFLKKSGKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHLY 66

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           +R G+G+G   KIYGGR+R G++P  F   S  VSR +LQ L+ + +++ D  GGR +TS
Sbjct: 67  MRGGVGVGAMCKIYGGRKRRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKDAAGGRRLTS 126

Query: 408 QGRRDLDQVAGTV 446
           QG+RDLD++AG V
Sbjct: 127 QGQRDLDRIAGQV 139

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>RS19_RAT (P17074) 40S ribosomal protein S19|
          Length = 144

 Score =  164 bits (415), Expect = 2e-40
 Identities = 77/135 (57%), Positives = 101/135 (74%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDVN  EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +Y
Sbjct: 5   VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLY 64

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LR G G+G   KIYGGRQRNG RP HF + S +V+R +LQ L+ + +++ D  GGR +T 
Sbjct: 65  LRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTP 124

Query: 408 QGRRDLDQVAGTVPA 452
           QG+RDLD++AG V A
Sbjct: 125 QGQRDLDRIAGQVAA 139

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>RS19_MOUSE (Q9CZX8) 40S ribosomal protein S19|
          Length = 144

 Score =  164 bits (415), Expect = 2e-40
 Identities = 77/135 (57%), Positives = 101/135 (74%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDVN  EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +Y
Sbjct: 5   VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLY 64

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LR G G+G   KIYGGRQRNG RP HF + S +V+R +LQ L+ + +++ D  GGR +T 
Sbjct: 65  LRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTP 124

Query: 408 QGRRDLDQVAGTVPA 452
           QG+RDLD++AG V A
Sbjct: 125 QGQRDLDRIAGQVAA 139

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>RS19_GILMI (Q9DFR5) 40S ribosomal protein S19|
          Length = 147

 Score =  163 bits (413), Expect = 3e-40
 Identities = 76/135 (56%), Positives = 101/135 (74%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDVN  EFV+A +A LK+SGK+++P+WVD+VK  R KEL P+D +W+YIRAAS  R +Y
Sbjct: 6   VKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGRHKELAPSDENWFYIRAASTVRHLY 65

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LR G G+G   KIYGGRQRNG  P H+ + S  V+R +LQ L+ + +I+ DP GGR +T+
Sbjct: 66  LRGGAGVGSMTKIYGGRQRNGVCPAHYSEGSKNVARKVLQALELLKMIEKDPNGGRRLTA 125

Query: 408 QGRRDLDQVAGTVPA 452
           QG RDLD++AG V A
Sbjct: 126 QGTRDLDRIAGQVSA 140

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>RS19_ICTPU (Q90YQ4) 40S ribosomal protein S19|
          Length = 147

 Score =  162 bits (409), Expect = 9e-40
 Identities = 76/135 (56%), Positives = 100/135 (74%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDVN  EFV+A +A LK+SGK+++P+WVDIVK A+ KEL P D +W+YIRAAS  R +Y
Sbjct: 8   VKDVNQQEFVRALAAFLKKSGKLKVPDWVDIVKLAKHKELAPCDDNWFYIRAASTVRHLY 67

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LR G+G+G   KIYGGR+RNG  P HF   S  V+R +LQ L+ + +++ DP GGR +T 
Sbjct: 68  LRGGVGVGSMIKIYGGRKRNGVCPSHFSVGSKNVARKVLQALEALKMVEKDPNGGRRLTP 127

Query: 408 QGRRDLDQVAGTVPA 452
           QG RDLD++AG V A
Sbjct: 128 QGTRDLDRIAGQVAA 142

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>RS19_PONPY (Q5R8M9) 40S ribosomal protein S19|
          Length = 144

 Score =  162 bits (409), Expect = 9e-40
 Identities = 76/135 (56%), Positives = 100/135 (74%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDVN  EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +Y
Sbjct: 5   VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLY 64

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LR G G+G   KIYGGRQRNG  P HF + S +V+R +LQ L+ + +++ D  GGR +T 
Sbjct: 65  LRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTP 124

Query: 408 QGRRDLDQVAGTVPA 452
           QG+RDLD++AG V A
Sbjct: 125 QGQRDLDRIAGQVAA 139

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>RS19_HUMAN (P39019) 40S ribosomal protein S19|
          Length = 144

 Score =  162 bits (409), Expect = 9e-40
 Identities = 76/135 (56%), Positives = 100/135 (74%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDVN  EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +Y
Sbjct: 5   VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLY 64

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LR G G+G   KIYGGRQRNG  P HF + S +V+R +LQ L+ + +++ D  GGR +T 
Sbjct: 65  LRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTP 124

Query: 408 QGRRDLDQVAGTVPA 452
           QG+RDLD++AG V A
Sbjct: 125 QGQRDLDRIAGQVAA 139

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>RS19_PIG (Q29308) 40S ribosomal protein S19 (Fragment)|
          Length = 135

 Score =  158 bits (400), Expect = 1e-38
 Identities = 74/131 (56%), Positives = 97/131 (74%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDVN  EFV+A +A LK+SGK+++PEWVD VK A  KEL P D +W+Y RAAS AR +Y
Sbjct: 5   VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAXHKELAPYDENWFYTRAASTARHLY 64

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LR G G+G   KIYGGRQRNG  P HF + S +V+R +LQ L+ + +++ D  GGR +T 
Sbjct: 65  LRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTP 124

Query: 408 QGRRDLDQVAG 440
           QG+RDLD++AG
Sbjct: 125 QGQRDLDRIAG 135

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>RS19_AEQIR (Q8ITC3) 40S ribosomal protein S19|
          Length = 144

 Score =  158 bits (399), Expect = 1e-38
 Identities = 69/133 (51%), Positives = 98/133 (73%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDV+ H F KA +A LK+SGKM++PEW  I+K ++F EL P D DW+Y RAAS+ R +Y
Sbjct: 5   VKDVDSHTFTKALAAFLKKSGKMKIPEWATIIKLSKFNELSPYDEDWFYTRAASICRHLY 64

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           +R   G+G   KIYG R+RNG+ P H+C+SSG+V+R +LQ L+   +++ D  GGR +TS
Sbjct: 65  IRSPAGVGALTKIYGDRKRNGTVPSHYCRSSGSVARRVLQALETQKLVEKDANGGRKLTS 124

Query: 408 QGRRDLDQVAGTV 446
           QG++DLD++A  V
Sbjct: 125 QGQKDLDRIAAQV 137

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>RS19_PAGMA (P61155) 40S ribosomal protein S19|
          Length = 146

 Score =  157 bits (398), Expect = 2e-38
 Identities = 73/135 (54%), Positives = 99/135 (73%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDVN  EFV+A +A LK+SGK+++P+WVD+VK  + KEL P+D +W+YIR+AS  R +Y
Sbjct: 6   VKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHLY 65

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LR G G+G   KIYG RQRNG  P H+   S  V+R +LQ L+ + +I+ DP GGR +T+
Sbjct: 66  LRGGAGVGSMTKIYGSRQRNGVCPAHYSVGSKNVARKVLQALELLKMIEKDPNGGRRLTA 125

Query: 408 QGRRDLDQVAGTVPA 452
           QG RDLD++AG V A
Sbjct: 126 QGTRDLDRIAGQVAA 140

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>RS19_EMENI (P27073) 40S ribosomal protein S19 (S16)|
          Length = 148

 Score =  155 bits (392), Expect = 8e-38
 Identities = 72/137 (52%), Positives = 100/137 (72%), Gaps = 1/137 (0%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           V+DV+  +F+ AY+A LKR GK+ +P WVD VKT+   ELPP DADWYY+RAA++AR IY
Sbjct: 6   VRDVDAQKFIVAYAAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHIY 65

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVD-PKGGRLIT 404
           LR+ +G+G  +K++G  +  GSRP H   +SGAV R +LQ L+K+G+++ D  KGGR IT
Sbjct: 66  LRKTVGVGRLRKVHGSTKNRGSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEEKGGRRIT 125

Query: 405 SQGRRDLDQVAGTVPAE 455
             G+RDLD++A T   E
Sbjct: 126 QSGQRDLDRIAKTTVDE 142

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>RS19B_SCHPO (P79016) 40S ribosomal protein S19-B (S16-B)|
          Length = 143

 Score =  154 bits (389), Expect = 2e-37
 Identities = 69/130 (53%), Positives = 94/130 (72%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDV+  +F+ AY+A LKRSGKM  P+W+DIVKT   KEL P D DWYY+RAA++AR IY
Sbjct: 6   VKDVDAQQFINAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIY 65

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LR+ +G+G   K+YGG    G RP H    SG+V R ++Q L+K+G+++    GGR I+ 
Sbjct: 66  LRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQ 125

Query: 408 QGRRDLDQVA 437
           QG+RDLD++A
Sbjct: 126 QGQRDLDRIA 135

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>RS19A_SCHPO (P58234) 40S ribosomal protein S19-A (S16-A)|
          Length = 144

 Score =  153 bits (387), Expect = 3e-37
 Identities = 69/130 (53%), Positives = 94/130 (72%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDV+  +F+ AY+A LKRSGKM  P+W+DIVKT   KEL P D DWYY+RAA++AR IY
Sbjct: 6   VKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIY 65

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LR+ +G+G   K+YGG    G RP H    SG+V R ++Q L+K+G+++    GGR I+ 
Sbjct: 66  LRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQ 125

Query: 408 QGRRDLDQVA 437
           QG+RDLD++A
Sbjct: 126 QGQRDLDRIA 135

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>RS19B_YEAST (P07281) 40S ribosomal protein S19-B (S16B) (YS16) (RP55)|
          Length = 143

 Score =  142 bits (358), Expect = 7e-34
 Identities = 64/131 (48%), Positives = 98/131 (74%), Gaps = 1/131 (0%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDAD-WYYIRAASMARKI 224
           V+DV   +F+ AY++ L+R GK+E+P +VDIVKT+   E+PP DA+ W+Y RAAS+AR I
Sbjct: 5   VRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHI 64

Query: 225 YLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLIT 404
           Y+R+ +G+G   K+YGG +  G RP     +SG+++R +LQ L+K+GI+++ PKGGR I+
Sbjct: 65  YMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRIS 124

Query: 405 SQGRRDLDQVA 437
             G+RDLD++A
Sbjct: 125 ENGQRDLDRIA 135

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>RS19A_YEAST (P07280) 40S ribosomal protein S19-A (S16A) (YS16) (RP55) (YP45)|
          Length = 143

 Score =  142 bits (358), Expect = 7e-34
 Identities = 64/131 (48%), Positives = 98/131 (74%), Gaps = 1/131 (0%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDAD-WYYIRAASMARKI 224
           V+DV   +F+ AY++ L+R GK+E+P +VDIVKT+   E+PP DA+ W+Y RAAS+AR I
Sbjct: 5   VRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHI 64

Query: 225 YLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLIT 404
           Y+R+ +G+G   K+YGG +  G RP     +SG+++R +LQ L+K+GI+++ PKGGR I+
Sbjct: 65  YMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRIS 124

Query: 405 SQGRRDLDQVA 437
             G+RDLD++A
Sbjct: 125 ENGQRDLDRIA 135

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>RS19A_DROME (P39018) 40S ribosomal protein S19a|
          Length = 155

 Score =  142 bits (358), Expect = 7e-34
 Identities = 62/133 (46%), Positives = 93/133 (69%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKD++ H   KA +  LK++GK+++P+ +DIVKTA+FKEL P D DW+Y+R AS+ R +Y
Sbjct: 5   VKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLY 64

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
            R   G+G   KIYGGR+RNG  P HFC+++   +R  LQ L+   +++  P GGR ++S
Sbjct: 65  HRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSS 124

Query: 408 QGRRDLDQVAGTV 446
            G+RDLD++A  +
Sbjct: 125 IGQRDLDRIANQI 137

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>RS19S_ASCSU (P39698) 40S ribosomal protein S19S|
          Length = 150

 Score =  141 bits (356), Expect = 1e-33
 Identities = 63/131 (48%), Positives = 94/131 (71%), Gaps = 1/131 (0%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDV+ HE V+  +  LK+SGK+++PEW D+VK    KEL P D+DWYY+R AS+AR++Y
Sbjct: 7   VKDVDQHEIVRYIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLY 66

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLIT 404
           +R   G+G  +++YGG +R G  P HF ++SG+V R  LQ L+ +  ++  P G GR++T
Sbjct: 67  IRSPTGVGALRRVYGGNKRRGVTPNHFARASGSVIRKALQTLEAIKWVEKHPDGNGRILT 126

Query: 405 SQGRRDLDQVA 437
            QGR+DLD++A
Sbjct: 127 KQGRKDLDRIA 137

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>RS19_ENTHI (O15631) 40S ribosomal protein S19|
          Length = 148

 Score =  136 bits (343), Expect = 4e-32
 Identities = 65/130 (50%), Positives = 91/130 (70%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           +KDV   +F+KAY+ HLK+SGK+E+PEWVD VKT   KEL P + DW YIRAA++ARK+Y
Sbjct: 7   IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVY 66

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           L  GIG+   ++ YG +      P H    SG V+R ILQ+L+KMGI+    + GR +T 
Sbjct: 67  LNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVG-KIQSGRSLTK 125

Query: 408 QGRRDLDQVA 437
           +GR+D+D++A
Sbjct: 126 EGRKDMDKIA 135

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>RS19B_DROME (Q7KS38) 40S ribosomal protein S19b|
          Length = 154

 Score =  131 bits (330), Expect = 1e-30
 Identities = 61/136 (44%), Positives = 88/136 (64%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VK+++ H   K  +A LK+SGK+ +PE    +KT +FKE  PTD DW+Y R AS+ R +Y
Sbjct: 5   VKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLY 64

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           LR   G+G F K+Y GR+RNG RP   C+SS    R  LQ L+   +++  P GGR +T 
Sbjct: 65  LRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTP 124

Query: 408 QGRRDLDQVAGTVPAE 455
           QG+R+LD++A  + A+
Sbjct: 125 QGQRNLDRIANKIVAK 140

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>RS19_CAEEL (O18650) 40S ribosomal protein S19|
          Length = 146

 Score =  131 bits (330), Expect = 1e-30
 Identities = 63/131 (48%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           +KDV+ HE  K+ +  LK+SGK+++PEW D+VK    KEL P D DW+Y RAAS+AR +Y
Sbjct: 7   IKDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLY 66

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLIT 404
            R   GIG F+K+YGG +R G  P HF  S+G   R  +Q+L+K+  ++  P G GR+++
Sbjct: 67  FRPA-GIGAFKKVYGGNKRRGVAPNHFQTSAGNCLRKAVQQLEKIKWVEKHPDGKGRILS 125

Query: 405 SQGRRDLDQVA 437
            QGR+DLD++A
Sbjct: 126 KQGRKDLDRIA 136

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>RS19G_ASCSU (P24494) 40S ribosomal protein S19G (Eliminated protein NO. 1)|
          Length = 148

 Score =  131 bits (330), Expect = 1e-30
 Identities = 61/131 (46%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VKDV+ HE V+  +  LK+SGK+++PEW D+ K    KEL P ++DWYY+R AS+AR++Y
Sbjct: 7   VKDVDQHEIVQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSDWYYVRTASIARRLY 66

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKG-GRLIT 404
           +R   G+   + +YGG +R G  P HF K+SG+V R  LQ L+ +  +   P G GR++T
Sbjct: 67  VRSPTGVDALRLVYGGSKRRGVVPNHFAKASGSVIRKALQTLEAIKWVQKHPDGNGRVLT 126

Query: 405 SQGRRDLDQVA 437
            QGR+DLD++A
Sbjct: 127 KQGRKDLDRIA 137

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>RS19E_METJA (P54057) 30S ribosomal protein S19e|
          Length = 148

 Score =  108 bits (271), Expect = 9e-24
 Identities = 58/145 (40%), Positives = 87/145 (60%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           V DV   + ++  +  LK    + +PEWVD VKT   +E  P   DW+YIR AS+ RKIY
Sbjct: 4   VYDVPADKLIQKTAEKLKEMN-IGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRKIY 62

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           +   +G+   +  YGGR+  G  P HF K SG + R  LQEL+K+G+++  P+ GR++T 
Sbjct: 63  IYGPVGVSRLRTAYGGRKNRGHEPEHFYKGSGNIIRKALQELEKLGLVEKTPE-GRVVTP 121

Query: 408 QGRRDLDQVAGTVPAEF*SVEVPSM 482
           +GR  LD +A  V  E  + E+P++
Sbjct: 122 KGRSFLDNIAKEVRDEIIN-EIPAL 145

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>RS19E_METTH (O27653) 30S ribosomal protein S19e|
          Length = 145

 Score =  107 bits (267), Expect = 3e-23
 Identities = 54/141 (38%), Positives = 84/141 (59%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           V DV     +   +  LK   K++ PEWV+ VKT   KE  P + DW+Y+RAA++ R++Y
Sbjct: 4   VYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVY 63

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           +   +G+   +  YGG++  GSRP  F + SGA+ R  LQ+L++ G+I  + + GR+IT 
Sbjct: 64  IDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKRE-ENGRVITP 122

Query: 408 QGRRDLDQVAGTVPAEF*SVE 470
           +GR  LD+ A  V  E   +E
Sbjct: 123 EGRSFLDKAAAEVKKEVEGLE 143

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>RS19E_AERPE (Q9YD22) 30S ribosomal protein S19e|
          Length = 153

 Score =  104 bits (260), Expect = 2e-22
 Identities = 54/112 (48%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
 Frame = +3

Query: 123 PEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLR-QGIGIGGFQKIYGGRQRNGSRP 299
           P W    KT   KE PPTD DW+Y+RAAS+ RK+Y   + IGI  F+ IYGGRQ  GS P
Sbjct: 30  PAWAYFAKTGPHKERPPTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAP 89

Query: 300 PHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 455
            HF K+ G+V R ILQ+L++ G++   P  GR I+  GR  LD  A  +  E
Sbjct: 90  EHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLLDTTAREIMEE 141

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>RS19E_ARCFU (O28210) 30S ribosomal protein S19e|
          Length = 147

 Score =  103 bits (257), Expect = 4e-22
 Identities = 57/146 (39%), Positives = 86/146 (58%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           V DV     +K  +  LK    +  PEW   VKT   KE  P   DW+Y+R AS+ R++Y
Sbjct: 4   VYDVPADLLIKRVAERLK--DMVAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRVY 61

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           +   +GI   +  YGGR+R GS+PP F K SGA+ RN L +L+++G +    + GR++T 
Sbjct: 62  IDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQLEQLGFVK-KTREGRVVTP 120

Query: 408 QGRRDLDQVAGTVPAEF*SVEVPSMK 485
            GR  LD+VA  + +E  S E+P+++
Sbjct: 121 MGRSFLDKVATELKSELVS-EIPALE 145

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>RS19E_PYRHO (O59041) 30S ribosomal protein S19e|
          Length = 150

 Score =  102 bits (253), Expect = 1e-21
 Identities = 53/146 (36%), Positives = 81/146 (55%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           V DV     V+  +  LK   +++ PEW   VKT R KE  P   DW+Y R AS+ R++Y
Sbjct: 4   VYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVY 63

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           +   +GI   +  YGGR+  G  P  F K+ G++ R  LQ+L+  G I+  P  GR++T 
Sbjct: 64  IDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTP 123

Query: 408 QGRRDLDQVAGTVPAEF*SVEVPSMK 485
           +GR  LD++A  +  E   + +P +K
Sbjct: 124 KGRSFLDKIATELKKELEEI-IPELK 148

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>RS19E_THEVO (Q97CU4) 30S ribosomal protein S19e|
          Length = 150

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 48/130 (36%), Positives = 67/130 (51%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VK V     +   S  LK   K++ P WV  VKT   KE PP   DW Y+RAASM RK+Y
Sbjct: 4   VKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLY 63

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           +   +GI      YGG+   GS+  H    S +++R +  EL+  G++    K GR ++ 
Sbjct: 64  INGYLGISRMSSEYGGKVDRGSKRYHAASGSRSITRFLFHELESAGLVQKTQK-GRSLSP 122

Query: 408 QGRRDLDQVA 437
           QG   LD  +
Sbjct: 123 QGMSLLDNAS 132

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>RS19E_HALMA (P19952) 30S ribosomal protein S19e (HS12) (E1.3)|
          Length = 152

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
 Frame = +3

Query: 54  DVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLR 233
           DV P E ++A +  L     +E P+W +  KT   +ELPP   D++  RAAS+ RK+ + 
Sbjct: 5   DVPPEELIEALTETLADEDDIEAPDWAEFTKTGVDRELPPEQEDFWTRRAASLLRKVAVD 64

Query: 234 QGIGIGGFQKIYG----GRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLI 401
             +G+   +  YG    G  R   RP    K SG + R  LQ+L+  G ++     GR +
Sbjct: 65  GPVGVNALRSEYGTSKQGTTRYRVRPHQKTKGSGNIIRTALQQLEDAGYVETSENDGRRV 124

Query: 402 TSQGRRDLDQVAGTVPAE 455
           T  GR  LD  AG +  E
Sbjct: 125 TGDGRSLLDDTAGDLLTE 142

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>RS19E_THEAC (Q9HM21) 30S ribosomal protein S19e|
          Length = 150

 Score = 82.8 bits (203), Expect = 7e-16
 Identities = 46/130 (35%), Positives = 67/130 (51%)
 Frame = +3

Query: 48  VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIY 227
           VK V     +   S  LK   K+  P+W   VKT   +E  P + DW Y+RAA+M RK+Y
Sbjct: 4   VKYVPSDLLINYVSEKLKSEKKIAEPDWSKYVKTGISREKSPVNRDWIYVRAAAMLRKLY 63

Query: 228 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITS 407
           +   +GI      YGG+   GS+  H  + S ++ R +  EL+K G +   PK GR ++ 
Sbjct: 64  INGYLGISRMSSEYGGKVDRGSKRYHAAQGSRSIIRYLFHELEKAGYVQKTPK-GRSLSP 122

Query: 408 QGRRDLDQVA 437
           QG   LD  +
Sbjct: 123 QGMSLLDNAS 132

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>LCE1A_HUMAN (Q5T7P2) Late cornified envelope protein 1A (Late envelope protein|
           1)
          Length = 110

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = -3

Query: 357 SATPEGCCGKQHHCSCRSVGGVNRSSDGHHRSSGIHQSQFPASGRSSLPS 208
           S +  GCCG      C S GG    S  HHR    H+ +  +SG  S PS
Sbjct: 45  SVSSGGCCGSSSGGGCSSGGGGCCLS--HHRRHRSHRHRLQSSGCCSQPS 92

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>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3703

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = -2

Query: 508  PNPTTEHNFIDGTSTDQNSAGTVPATWSRSRLPWEVMSLPPLGS 377
            P+P +       T+++ +SAG  P++   S++P E + +PPLG+
Sbjct: 1652 PSPVSTSGSNTFTTSNPSSAGIAPSSNLLSQVPTESVGMPPLGN 1695

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>STP2_CANFA (O77645) Nuclear transition protein 2 (TP-2) (TP2)|
          Length = 129

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
 Frame = -3

Query: 360 SSATPEG--C--CGKQHHC-----SCRSVGGVNRSSDGHHRSSGIHQSQFPASGRSSLPS 208
           S++ P+G  C  C    HC     SC      ++S  GHH SSG HQSQ P     +LP 
Sbjct: 17  SNSRPQGHTCSQCTCSSHCQTCSQSCSQSRSSSQSPTGHHSSSG-HQSQSP---HPTLPP 72

Query: 207 R 205
           R
Sbjct: 73  R 73

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>TRPF_SACKU (Q5XQP9) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)|
           (PRAI)
          Length = 226

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 306 FCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 446
           F  + G    N+   LQ  G+I VD  GG  + + G +D+D++   V
Sbjct: 175 FMLAGGLTPENVSDALQLHGVIGVDVSGG--VETNGMKDMDKITNFV 219

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>LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late envelope protein|
           3)
          Length = 118

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
 Frame = -3

Query: 357 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 208
           S +  GCCG     SC S  G   SS G      HHR    H  +  +SG  S PS
Sbjct: 45  SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPS 100

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>LCE1B_HUMAN (Q5T7P3) Late cornified envelope protein 1B (Late envelope protein|
           2) (Small proline-rich-like epidermal differentiation
           complex protein 2A)
          Length = 118

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
 Frame = -3

Query: 357 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 208
           S +  GCCG     SC S  G   SS G      HHR    H  +  +SG  S PS
Sbjct: 45  SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPS 100

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>LCE1F_HUMAN (Q5T754) Late cornified envelope protein 1F (Late envelope protein|
           6)
          Length = 118

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 6/61 (9%)
 Frame = -3

Query: 357 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPSRQP* 196
           S +  GCCG      C S GG   SS G      HHR    H+ +  +S   S PS    
Sbjct: 45  SVSSGGCCGSSSGGCCSSGGGGCCSSGGGGCCLSHHRRRRSHRHRPQSSDCCSQPSAGSS 104

Query: 195 C 193
           C
Sbjct: 105 C 105

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>HMD_METVO (Q50840) 5,10-methenyltetrahydromethanopterin hydrogenase (EC|
           1.12.98.2) (H(2)-forming
           N(5),N(10)-methylenetetrahydromethanopterin
           dehydrogenase)
           (N(5),N(10)-methenyltetrahydromethanopterin hydrogenase)
           (H(2)-dependent methylene-H(4)MPT dehydro
          Length = 343

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
 Frame = +3

Query: 69  EFVKAYSAHLKRSGKMELPEWVDIVKTARFKELP-PTDADWYYIRAASMARKIYLRQGIG 245
           ++ K   AHL    +  +PE  D VK A+ KELP P  A  +++    +  K+       
Sbjct: 80  DYAKVMEAHLAGKAEEVMPEIRDAVK-AKAKELPKPPKACIHFVNPEKVGLKVTADDKDA 138

Query: 246 IGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIID-----VDPKGGRLITSQ 410
           +     +     + GS+P        A+    +  +++  I+        PK  ++    
Sbjct: 139 VKDADIVITWLPKGGSQP--------AIIEKFVANIKEGAIVTHACTIPTPKFAKIFKDL 190

Query: 411 GRRDLDQVA---GTVP 449
           GR DL+ ++   G VP
Sbjct: 191 GRDDLNIISYHPGAVP 206

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>RPOC_SYMTH (Q67JT4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1179

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 60  NPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWY 191
           +PHE + AY     ++G +EL +WV+I      K+L P   +W+
Sbjct: 517 HPHEALLAY-----QNGLVELHDWVEIRFPEPPKDLEPYSEEWW 555

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>GAL1_PYRKO (Q5JEK8) Galactokinase (EC 2.7.1.6) (Galactose kinase)|
          Length = 350

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
 Frame = +3

Query: 63  PHEFVKAYSAHLKRSGKMELPE------WVDIVK 146
           PHE V+ YS H K+S   EL +      W D VK
Sbjct: 38  PHERVELYSEHFKKSVSFELEKLEKGNNWADYVK 71

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>YDHC_BACSU (O05494) Hypothetical transcriptional regulator ydhC|
          Length = 224

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
 Frame = +3

Query: 264 IYGGRQRNGSR--PPHFCKSSGAVSRNILQE----LQKMGIIDVDPKGGRLITSQGRRDL 425
           I+ G  + G R       KS G VSR+ ++E    L+K G++  D + G  ITS   +D+
Sbjct: 24  IFNGTFKPGERINETQLAKSFG-VSRSPIREAMRLLEKDGLLKADDRNGFSITSLTAKDV 82

Query: 426 DQVAG-TVPAEF*SVEV 473
           D++    +P E  +VE+
Sbjct: 83  DEIYKIRIPLEQLAVEL 99

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>LCE1E_HUMAN (Q5T753) Late cornified envelope protein 1E (Late envelope protein|
           5)
          Length = 118

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
 Frame = -3

Query: 357 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 208
           S +  GCCG     SC S  G   SS G      HHR    H+ +  +S   S PS
Sbjct: 45  SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQSSDCCSQPS 100

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>GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 932

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 20/42 (47%), Positives = 22/42 (52%)
 Frame = -3

Query: 288 RSSDGHHRSSGIHQSQFPASGRSSLPSRQP*CSTSQRQ*AAA 163
           R SDG   SS   Q Q       SLP R+P  STSQ+  AAA
Sbjct: 647 RQSDGTPYSSA--QPQRDTRSIGSLPEREPSASTSQKDLAAA 686

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>PPGK_MYCLE (Q49988) Polyphosphate glucokinase (EC 2.7.1.63)|
           (Polyphosphate--glucose phosphotransferase)
          Length = 324

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -2

Query: 526 HNSKL*PNPTTEHNFIDGTSTDQNSAGTVPATWSRSRLPW 407
           HN KL PN    H  +DG   +Q +A +V   +  S   W
Sbjct: 218 HNGKLIPNTEFGHLEVDGKEAEQRAASSVKDKYKWSYRTW 257

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>DDL_MYCSM (Q9ZGN0) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 373

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = +3

Query: 264 IYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGT 443
           +YGGR    S     C S+G++ RN+  E  ++  I + P G  ++T      L    G 
Sbjct: 16  VYGGRS---SEHAISCVSAGSILRNLDPERFEVVAIGITPDGSWVLTDGRPETLAITDGK 72

Query: 444 VPA 452
           +PA
Sbjct: 73  LPA 75

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>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)|
            (CDP) (Homeobox protein Clox) (Clox-1) (Fragment)
          Length = 975

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = -3

Query: 333  GKQHHCSCRSVGGVNRSSDGHHRSSGIHQSQFPASGR--SSLPS 208
            G + + S  + GG  R+ DG HRSS +  +  PA+ R  SSL S
Sbjct: 885  GGRRYLSRPARGGPCRARDGAHRSSALPSTSAPAAARRPSSLQS 928


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,719,561
Number of Sequences: 219361
Number of extensions: 1667296
Number of successful extensions: 5428
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 5214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5409
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result