Clone Information

BLAST Search Result

Clone Name	bags22g17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL5A_ORYSA (P49625) 60S ribosomal protein L5-1	302	5e-82
2	RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2	299	4e-81
3	RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5	270	2e-72
4	RL5_ARATH (P49227) 60S ribosomal protein L5	262	8e-70
5	RL5_CAEEL (P49405) 60S ribosomal protein L5	163	4e-40
6	RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)	162	8e-40
7	RL5_BOMMO (O76190) 60S ribosomal protein L5	157	2e-38
8	RL5_STYCL (Q26481) 60S ribosomal protein L5	156	4e-38
9	RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)	155	1e-37
10	RL5_HELAN (O65353) 60S ribosomal protein L5	154	2e-37
11	RL5B_XENLA (P15126) 60S ribosomal protein L5-B	149	5e-36
12	RL5_DUNSA (O22608) 60S ribosomal protein L5	148	1e-35
13	RL5A_XENLA (P15125) 60S ribosomal protein L5-A	148	1e-35
14	RL5_CHICK (P22451) 60S ribosomal protein L5	146	6e-35
15	RL5_MACFA (Q4R5M0) 60S ribosomal protein L5	145	8e-35
16	RL5_HUMAN (P46777) 60S ribosomal protein L5	145	8e-35
17	RL5_RAT (P09895) 60S ribosomal protein L5	143	4e-34
18	RL5B_SCHPO (O74306) 60S ribosomal protein L5-B	142	1e-33
19	RL5_MOUSE (P47962) 60S ribosomal protein L5	142	1e-33
20	RL5A_SCHPO (P52822) 60S ribosomal protein L5-A	140	4e-33
21	RL5_ANOGA (O44248) 60S ribosomal protein L5	138	1e-32
22	RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosoma...	133	4e-31
23	RL18_METKA (Q8TZA5) 50S ribosomal protein L18P	58	3e-08
24	RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P	56	1e-07
25	RL18_METJA (P54044) 50S ribosomal protein L18P	54	5e-07
26	RL18_AERPE (Q9YF94) 50S ribosomal protein L18P	52	2e-06
27	RL18_METMP (Q6LXD4) 50S ribosomal protein L18P	50	5e-06
28	RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P	50	6e-06
29	RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P	50	8e-06
30	RL18_PYRHO (O59438) 50S ribosomal protein L18P	48	2e-05
31	RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)	48	2e-05
32	RL18_SULTO (Q975J9) 50S ribosomal protein L18P	48	3e-05
33	RL18_NANEQ (Q74MJ4) 50S ribosomal protein L18P	46	1e-04
34	RL18_METVA (P14033) 50S ribosomal protein L18P	44	4e-04
35	RL18_SULSO (Q9UX88) 50S ribosomal protein L18P	42	0.002
36	RL18_METTH (O26130) 50S ribosomal protein L18P	41	0.004
37	RL18_ARCFU (O28373) 50S ribosomal protein L18P	38	0.023
38	RL18_SULAC (O05640) 50S ribosomal protein L18P	38	0.030
39	RL18_HALSA (P50562) 50S ribosomal protein L18P (HCuL18) (HSal18)...	35	0.26
40	RL18_HALMA (P14123) 50S ribosomal protein L18P (Hmal18) (Hl12)	34	0.34
41	FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3	34	0.44
42	ZN674_HUMAN (Q2M3X9) Zinc finger protein 674	33	0.57
43	FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3	33	0.75
44	SRYD_DROME (P07664) Serendipity locus protein delta	31	2.8
45	MYF6_FUGRU (Q6SYV5) Myogenic factor 6 (Myf-6) (Muscle-specific r...	31	2.8
46	FPRB_MYCLE (O33064) Probable ferredoxin/ferredoxin--NADP reducta...	31	3.7
47	ZEP1_HUMAN (P15822) Zinc finger protein 40 (Human immunodeficien...	31	3.7
48	JHD2A_MOUSE (Q6PCM1) JmjC domain-containing histone demethylatio...	30	4.9
49	OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-b...	30	4.9
50	UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstrea...	30	4.9
51	CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (S...	30	6.3
52	SCNNB_RAT (P37090) Amiloride-sensitive sodium channel beta-subun...	30	6.3
53	NIPB_DROME (Q7PLI2) Nipped-B protein (SCC2 homolog)	30	6.3
54	NCKP1_ORYSA (Q6ZBH9) Probable protein NAP1 (Nck-associated prote...	30	6.3
55	NCKP1_ARATH (Q5S2C4) Protein NAP1 (Nck-associated protein 1) (At...	30	6.3
56	RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)	30	8.3
57	ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (E...	30	8.3
58	VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein ...	30	8.3

>RL5A_ORYSA (P49625) 60S ribosomal protein L5-1|
          Length = 304

 Score =  302 bits (774), Expect = 5e-82
 Identities = 148/184 (80%), Positives = 161/184 (87%)
 Frame = +3

Query: 3   LKSRDLDEEYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXX 182
           LK R LD+EYEGN+EATGED+ VEPADERRPFRALLDVGLIRTTTGNRVF          
Sbjct: 111 LKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGG 170

Query: 183 XXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKG 362
             IPHSDKRFAGFKKDEK LD++IHRKYIYGGHVADYMRS+A+EEPEK+Q HFSEY+KKG
Sbjct: 171 LDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKG 230

Query: 363 ISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNN 542
           I AD MEA+YKKVHAAIRADP+MAKSTK  P THKRYN KKLTYE+RKASLVERLNALN+
Sbjct: 231 IDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNS 290

Query: 543 SAGA 554
           SAGA
Sbjct: 291 SAGA 294

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>RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2|
          Length = 304

 Score =  299 bits (766), Expect = 4e-81
 Identities = 147/184 (79%), Positives = 160/184 (86%)
 Frame = +3

Query: 3   LKSRDLDEEYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXX 182
           L  R LD+EYEGNVEATGED+ VEPADERRPFRALLDVGLIRTTTGNRVF          
Sbjct: 111 LTLRGLDQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGG 170

Query: 183 XXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKG 362
             IPHSDKRFAGFKKDEK LD++IHRKYIYGGHVADYMRS+A+EEPEK+Q HFSEY+KKG
Sbjct: 171 LDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKG 230

Query: 363 ISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNN 542
           I AD ME++YKKVHAAIRADP+MAKSTK  P THKRYN KKLTYE+RKASLVERLNALN+
Sbjct: 231 IDADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNS 290

Query: 543 SAGA 554
           SAGA
Sbjct: 291 SAGA 294

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>RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5|
          Length = 302

 Score =  270 bits (691), Expect = 2e-72
 Identities = 131/182 (71%), Positives = 150/182 (82%)
 Frame = +3

Query: 3   LKSRDLDEEYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXX 182
           LK  ++D EYEGNVEATGED+SVEPAD RRPFRALLDVGLIRTTTGNRVF          
Sbjct: 110 LKMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGG 169

Query: 183 XXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKG 362
             IPHSDKRFAG+ K+ + LD E+HRKYI+GGHVA YMR+L ++EPEKYQ+HFSEYIKKG
Sbjct: 170 LDIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKG 229

Query: 363 ISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNN 542
           I AD++E +YKKVHAAIRA+P   KS KP PK HKRYN KKLTY+ERKA LVERLNALN+
Sbjct: 230 IEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNS 289

Query: 543 SA 548
           +A
Sbjct: 290 AA 291

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>RL5_ARATH (P49227) 60S ribosomal protein L5|
          Length = 301

 Score =  262 bits (669), Expect = 8e-70
 Identities = 126/183 (68%), Positives = 145/183 (79%)
 Frame = +3

Query: 3   LKSRDLDEEYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXX 182
           LK  ++D+EYEGNVEATGEDFSVEP D RRPFRALLDVGLIRTTTGNRVF          
Sbjct: 110 LKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGG 169

Query: 183 XXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKG 362
             IPHSDKRFAGF K+ K LDAEIHR YIYGGHV++YM+ L ++EPEK QTHFS YIKKG
Sbjct: 170 LDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKG 229

Query: 363 ISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNN 542
           + A+ +E +YKKVHAAIRA+P+  K+ K APK HKRYN KKLTYEERK  L+ER+ ALN 
Sbjct: 230 VEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNG 289

Query: 543 SAG 551
           + G
Sbjct: 290 AGG 292

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>RL5_CAEEL (P49405) 60S ribosomal protein L5|
          Length = 293

 Score =  163 bits (413), Expect = 4e-40
 Identities = 79/174 (45%), Positives = 116/174 (66%)
 Frame = +3

Query: 3   LKSRDLDEEYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXX 182
           LK+  LD  Y+G+ E TGED++VE   +R PF+A+LD+GL RTTTG+++F          
Sbjct: 110 LKTIGLDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGG 169

Query: 183 XXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKG 362
             +PHS+ RF GF ++ K  +AE HR  I G HVADYM  L +E+ ++Y+  FS+++  G
Sbjct: 170 INVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAG 229

Query: 363 ISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 524
           ++AD++ A Y+KVH+AIRAD S A   K A K  KR+  K+LTY+ERK  + ++
Sbjct: 230 LNADNLVATYQKVHSAIRADASPA--AKKAAKPSKRHTAKRLTYDERKQRVADK 281

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>RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)|
          Length = 121

 Score =  162 bits (410), Expect = 8e-40
 Identities = 77/109 (70%), Positives = 88/109 (80%)
 Frame = +3

Query: 225 KDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVH 404
           KD K LDAE+HRKYIYGGHVA YM  L ++EPEKYQ+HFS YIK  ++ D++E +YKKVH
Sbjct: 3   KDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVH 62

Query: 405 AAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSAG 551
           AAIR DPS  KS K  PKTHKRYN KKLTYEERKA L+ERLNALN + G
Sbjct: 63  AAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALNAAGG 111

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>RL5_BOMMO (O76190) 60S ribosomal protein L5|
          Length = 299

 Score =  157 bits (398), Expect = 2e-38
 Identities = 85/186 (45%), Positives = 113/186 (60%), Gaps = 9/186 (4%)
 Frame = +3

Query: 3   LKSRDLDEEYEGNVEATGEDFSVEPADERR-PFRALLDVGLIRTTTGNRVFXXXXXXXXX 179
           L+   LD  Y G  + TG++++VEP D     FR  LDVGL RTTTG RVF         
Sbjct: 110 LQRLGLDTLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGRRVFGAMKGAVDG 169

Query: 180 XXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKK 359
              +PHS KRF G+  + K  +AE+HR +I+G HVA+YMRSL  ++ + ++  FS+YIK 
Sbjct: 170 GLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKL 229

Query: 360 GISADDMEAVYKKVHAAIRADPS-MAKSTKPAPKTHKRYNPKKLTYEER-------KASL 515
           G++AD +EA+YKK H AIRADPS   K  K      KR+N +KLT  ER       KAS 
Sbjct: 230 GVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASF 289

Query: 516 VERLNA 533
           ++RL A
Sbjct: 290 IKRLQA 295

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>RL5_STYCL (Q26481) 60S ribosomal protein L5|
          Length = 294

 Score =  156 bits (395), Expect = 4e-38
 Identities = 79/164 (48%), Positives = 106/164 (64%), Gaps = 1/164 (0%)
 Frame = +3

Query: 18  LDEEYEGNVEATGEDFSVEPADERR-PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIP 194
           LDE YEG  E  G++F VE  D +   FRA LDVGL RTTTG +VF            IP
Sbjct: 114 LDEIYEGQTEIDGDEFYVEDVDGKPGAFRAFLDVGLARTTTGAKVFGAMKGAADGGLDIP 173

Query: 195 HSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISAD 374
           HS KRF G+  +     AE+HR +I+GGHV++YM+ L +E+ E ++  FS+YIK G++AD
Sbjct: 174 HSTKRFPGYDDESGDFSAEVHRSHIFGGHVSNYMKELEEEDEEAFKRQFSQYIKHGVTAD 233

Query: 375 DMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERK 506
            +E +Y K HAAIR DP+  K T  A KT KR+N KK+T+ +R+
Sbjct: 234 TVEEMYTKAHAAIREDPTPKKKTDFAGKT-KRWNRKKMTFSQRR 276

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>RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)|
          Length = 301

 Score =  155 bits (392), Expect = 1e-37
 Identities = 86/192 (44%), Positives = 116/192 (60%), Gaps = 12/192 (6%)
 Frame = +3

Query: 3   LKSRDLDEEYEGNVEATGEDFSVEPAD----ERRPFRALLDVGLIRTTTGNRVFXXXXXX 170
           LK   LDE ++G  EA GE    E A+    ERRPF+A LDVGL RT+TG RVF      
Sbjct: 110 LKKLGLDETFKGVEEADGEYKLTEAAETDDGERRPFKAFLDVGLARTSTGARVFGAMKGA 169

Query: 171 XXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEY 350
                 IPHS+ RF G+  + + LDAE  +KYI+GGHVA+YM +LAD++ E+Y++ F+ Y
Sbjct: 170 SDGGIFIPHSENRFPGYDMESEELDAETLKKYIFGGHVAEYMETLADDDEERYKSQFNRY 229

Query: 351 IKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHK--------RYNPKKLTYEERK 506
           I+  + AD +E +Y + HAAIR DP   K+   APK  K        +Y   KLT E+R 
Sbjct: 230 IEDDLEADGLEDLYAEAHAAIREDP-FKKAESEAPKKTKEEWKAESLKYKKSKLTREQRA 288

Query: 507 ASLVERLNALNN 542
           A + ER+ AL +
Sbjct: 289 AGVQERIAALRS 300

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>RL5_HELAN (O65353) 60S ribosomal protein L5|
          Length = 297

 Score =  154 bits (389), Expect = 2e-37
 Identities = 82/173 (47%), Positives = 112/173 (64%), Gaps = 2/173 (1%)
 Frame = +3

Query: 3   LKSRDLDEEYEGNVEATGEDFSVEPADERR-PFRALLDVGLIRTTTGNRVFXXXXXXXXX 179
           L    LD+ Y G+ E TGE+F+V+P ++    FR  LDVGL+RTTTG RVF         
Sbjct: 110 LSQLGLDKLYIGSTEVTGEEFNVKPVEDGPGAFRCYLDVGLMRTTTGARVFGAMKGAVDG 169

Query: 180 XXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKK 359
              I HS KRF GF  + K  +A++HR++I+G HVA+YMR LA+E+ E Y+  FS+YIK 
Sbjct: 170 GLNILHSTKRFPGFDSESKEFNADVHRQHIFGQHVAEYMRQLAEEDDEAYKRQFSQYIKL 229

Query: 360 GISADDMEAVYKKVHAAIRADPSMAKSTKPA-PKTHKRYNPKKLTYEERKASL 515
           G++AD +E +YKK H AIRA+P+     K A PK  KR+  KKLT E+R+  +
Sbjct: 230 GLNADAIEGLYKKAHEAIRANPARKTVAKKAHPK--KRWTEKKLTREQRQGKV 280

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>RL5B_XENLA (P15126) 60S ribosomal protein L5-B|
          Length = 295

 Score =  149 bits (377), Expect = 5e-36
 Identities = 74/170 (43%), Positives = 106/170 (62%), Gaps = 1/170 (0%)
 Frame = +3

Query: 18  LDEEYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIP 194
           LD+ YEG VE TG++++VE  D E   F   LD GL RTTTGN+VF            IP
Sbjct: 114 LDKVYEGQVEVTGDEYNVESVDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIP 173

Query: 195 HSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISAD 374
           HS KRF G+  + K  + E+HRK+I+  ++A+YMR L +E+ + Y+  FS+YIK G++AD
Sbjct: 174 HSTKRFPGYDSESKEFNPEVHRKHIFAQNIAEYMRLLMEEDEDAYKKQFSQYIKNGVAAD 233

Query: 375 DMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 524
            +E +YKK HA IR +P   K  K   K  KR+N  KL+ E++K  + ++
Sbjct: 234 QLEDIYKKAHAGIRENPVHEKKPKKEVK-KKRWNRAKLSLEQKKDRVAQK 282

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>RL5_DUNSA (O22608) 60S ribosomal protein L5|
          Length = 271

 Score =  148 bits (374), Expect = 1e-35
 Identities = 72/161 (44%), Positives = 103/161 (63%), Gaps = 1/161 (0%)
 Frame = +3

Query: 3   LKSRDLDEEYEGNVEATGEDFSVEPADER-RPFRALLDVGLIRTTTGNRVFXXXXXXXXX 179
           L   +L + Y+G  E  GED++VEP ++  +PF  LLD GL RT+TG++VF         
Sbjct: 110 LTKLNLADTYKGQEEPDGEDYNVEPVEDGPKPFYCLLDTGLKRTSTGSKVFAAMKGALDG 169

Query: 180 XXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKK 359
              IPH++KRF G+   +K LD E+ +KYIYGGHVA+Y  ++ +EEPEKYQ HFS Y++ 
Sbjct: 170 GLDIPHNEKRFVGYA--DKKLDTEVLQKYIYGGHVAEYQETMQEEEPEKYQAHFSSYVEN 227

Query: 360 GISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPK 482
            I  D +E +YK+VHA IR +P   K  +  P   KR++P+
Sbjct: 228 EIEPDGIEDMYKEVHAKIRENPCPPKKERTKPADAKRWSPQ 268

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>RL5A_XENLA (P15125) 60S ribosomal protein L5-A|
          Length = 295

 Score =  148 bits (374), Expect = 1e-35
 Identities = 75/170 (44%), Positives = 106/170 (62%), Gaps = 1/170 (0%)
 Frame = +3

Query: 18  LDEEYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIP 194
           LD+ YEG VE TG++++VE  D E   F   LD GL RTTTGN+VF            IP
Sbjct: 114 LDKVYEGQVEVTGDEYNVESIDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIP 173

Query: 195 HSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISAD 374
           HS KRF G+  + K  + E+HRK+I+  +VA+YMR L +E+ + Y+  FS+YIK G++AD
Sbjct: 174 HSTKRFPGYDSESKEFNPEVHRKHIFAQNVAEYMRLLMEEDEDAYKKQFSQYIKNGVTAD 233

Query: 375 DMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 524
            +E +YKK HA IR +P   K  K   K  KR+N  KL+ E++K  + ++
Sbjct: 234 QVEDLYKKAHAGIRENPVHEKKPKKEVK-KKRWNRAKLSLEQKKDRVAQK 282

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>RL5_CHICK (P22451) 60S ribosomal protein L5|
          Length = 296

 Score =  146 bits (368), Expect = 6e-35
 Identities = 76/170 (44%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
 Frame = +3

Query: 18  LDEEYEGNVEATGEDFSVEPADERR-PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIP 194
           LD+ YEG VE TG++++VE  D +   F   LD GL RTTTGN+VF            IP
Sbjct: 114 LDKIYEGQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIP 173

Query: 195 HSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISAD 374
           HS KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  I+ D
Sbjct: 174 HSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNITPD 233

Query: 375 DMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 524
            ME +YKK HAAIR +P   K  K   K  KR N  K++  ++K  + ++
Sbjct: 234 GMEEMYKKAHAAIRDNPVHEKKPKREVK-KKRVNSTKMSLAQKKDRVAQK 282

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>RL5_MACFA (Q4R5M0) 60S ribosomal protein L5|
          Length = 296

 Score =  145 bits (367), Expect = 8e-35
 Identities = 74/170 (43%), Positives = 105/170 (61%), Gaps = 1/170 (0%)
 Frame = +3

Query: 18  LDEEYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIP 194
           +D+ YEG VE TG++++VE  D +   F   LD GL RTTTGN+VF            IP
Sbjct: 114 MDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIP 173

Query: 195 HSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISAD 374
           HS KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++ D
Sbjct: 174 HSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPD 233

Query: 375 DMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 524
            ME +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 234 MMEEMYKKAHAAIRENPVYEKKPKKEVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_HUMAN (P46777) 60S ribosomal protein L5|
          Length = 296

 Score =  145 bits (367), Expect = 8e-35
 Identities = 74/170 (43%), Positives = 105/170 (61%), Gaps = 1/170 (0%)
 Frame = +3

Query: 18  LDEEYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIP 194
           +D+ YEG VE TG++++VE  D +   F   LD GL RTTTGN+VF            IP
Sbjct: 114 MDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIP 173

Query: 195 HSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISAD 374
           HS KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++ D
Sbjct: 174 HSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPD 233

Query: 375 DMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 524
            ME +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 234 MMEEMYKKAHAAIRENPVYEKKPKKEVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_RAT (P09895) 60S ribosomal protein L5|
          Length = 296

 Score =  143 bits (361), Expect = 4e-34
 Identities = 73/170 (42%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
 Frame = +3

Query: 18  LDEEYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIP 194
           +D+ YEG VE  G++++VE  D +   F   LD GL RTTTGN+VF            IP
Sbjct: 114 MDKIYEGQVEVNGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIP 173

Query: 195 HSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISAD 374
           HS KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++ D
Sbjct: 174 HSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPD 233

Query: 375 DMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 524
            ME +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 234 MMEEMYKKAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5B_SCHPO (O74306) 60S ribosomal protein L5-B|
          Length = 294

 Score =  142 bits (357), Expect = 1e-33
 Identities = 86/185 (46%), Positives = 105/185 (56%), Gaps = 5/185 (2%)
 Frame = +3

Query: 18  LDEEYEGNVEATGEDFSVEPA--DERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXI 191
           L ++YEG  E  GE F +  A  D  RPF+  LDVGL RT+TG+RVF            I
Sbjct: 115 LADKYEGVTEPEGE-FELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFI 173

Query: 192 PHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISA 371
           PHS  RF GF  + + LD E  RKYIYGGHVA+YM  L D++ E+YQ  FS  I  GI +
Sbjct: 174 PHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIES 233

Query: 372 DDMEAVYKKVHAAIRADPSMAKSTKPA---PKTHKRYNPKKLTYEERKASLVERLNALNN 542
           D +E +Y + +A IR DPS  KS K A        +Y  +KLT EERK    ER NA   
Sbjct: 234 DQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKYTQRKLTAEERK----ERFNAKVI 289

Query: 543 SAGAA 557
            AG A
Sbjct: 290 EAGRA 294

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>RL5_MOUSE (P47962) 60S ribosomal protein L5|
          Length = 296

 Score =  142 bits (357), Expect = 1e-33
 Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
 Frame = +3

Query: 18  LDEEYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIP 194
           +D+ YEG VE  G +++VE  D +   F   LD GL RTTTGN+VF            IP
Sbjct: 114 MDKIYEGQVEVNGGEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIP 173

Query: 195 HSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISAD 374
           HS KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++ D
Sbjct: 174 HSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPD 233

Query: 375 DMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 524
            ME +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 234 MMEEMYKKAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5A_SCHPO (P52822) 60S ribosomal protein L5-A|
          Length = 294

 Score =  140 bits (352), Expect = 4e-33
 Identities = 85/185 (45%), Positives = 105/185 (56%), Gaps = 5/185 (2%)
 Frame = +3

Query: 18  LDEEYEGNVEATGEDFSVEPA--DERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXI 191
           L ++YEG  E  GE F +  A  D  RPF+  LDVGL RT+TG+RVF            I
Sbjct: 115 LADKYEGVTEPEGE-FELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFI 173

Query: 192 PHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISA 371
           PHS  RF GF  + + LD E  RKYIYGGHVA+YM  L D++ E+YQ  FS  I  GI +
Sbjct: 174 PHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIES 233

Query: 372 DDMEAVYKKVHAAIRADPSMAKSTKPA---PKTHKRYNPKKLTYEERKASLVERLNALNN 542
           D +E +Y + +A IR DPS  KS K A        ++  +KLT EERK    ER NA   
Sbjct: 234 DQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKHTQRKLTAEERK----ERFNAKVI 289

Query: 543 SAGAA 557
            AG A
Sbjct: 290 EAGRA 294

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>RL5_ANOGA (O44248) 60S ribosomal protein L5|
          Length = 327

 Score =  138 bits (348), Expect = 1e-32
 Identities = 73/159 (45%), Positives = 99/159 (62%), Gaps = 2/159 (1%)
 Frame = +3

Query: 3   LKSRDLDEEYEGNVEATGEDFSVEPADER-RPFRALLDVGLIRTTTGNRVFXXXXXXXXX 179
           L+   LD  Y G  + TGE++ VEP DE    FR  LDVGL RTTTG+RVF         
Sbjct: 110 LQKLRLDTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMKGAVDG 169

Query: 180 XXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKK 359
              IPHS KRF G+  + KS +AE+HR +I+G HVA+YMR+L +E+ E ++  FS+YI  
Sbjct: 170 GLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYISL 229

Query: 360 GISADDMEAVYKKVHAAIR-ADPSMAKSTKPAPKTHKRY 473
           GI ADD+E +YK  HA+IR   PS     + +P++  R+
Sbjct: 230 GIKADDIENIYKNAHASIRKIPPSRRNPRRRSPRSGGRW 268

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>RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosomal 5S|
           RNA-binding protein)
          Length = 296

 Score =  133 bits (335), Expect = 4e-31
 Identities = 72/184 (39%), Positives = 101/184 (54%), Gaps = 6/184 (3%)
 Frame = +3

Query: 3   LKSRDLDEEYEGNVEATGE-DFSVEPADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXX 179
           L+   LDE Y+G  E  GE + +    D  RPF+  LD+GL RTTTG RVF         
Sbjct: 109 LQRLGLDETYKGVEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDG 168

Query: 180 XXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKK 359
              +PHS+ RF G+  + + +D E+ R YI+GGHV+ YM  LAD++ E++   F  Y+  
Sbjct: 169 GLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELFKGYLAD 228

Query: 360 GISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTH-----KRYNPKKLTYEERKASLVER 524
            I AD +E +Y   H AIRADP+   + K   K       K+Y   KL+ EER A +  +
Sbjct: 229 DIDADSLEDIYTSAHEAIRADPAFKPTEKKFTKEQYAAESKKYRQTKLSKEERAARVAAK 288

Query: 525 LNAL 536
           + AL
Sbjct: 289 IAAL 292

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>RL18_METKA (Q8TZA5) 50S ribosomal protein L18P|
          Length = 202

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 33/113 (29%), Positives = 58/113 (51%)
 Frame = +3

Query: 84  ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRK 263
           ER   RA++D+GL R   G+RVF            IPH           E+ L  E    
Sbjct: 99  ERGIERAVIDIGLHRPVRGSRVFAMLKGALDAGMDIPHG----------EEVLPPEDR-- 146

Query: 264 YIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRAD 422
            I G H+A+  R + +E+PE+Y+  FS+Y+++G+  +++   +++V + I  +
Sbjct: 147 -IRGEHIANLARQIKEEDPEEYERRFSKYLERGLKPEELPEHFEEVKSKIEEE 198

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>RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P|
          Length = 205

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 35/112 (31%), Positives = 51/112 (45%)
 Frame = +3

Query: 78  ADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIH 257
           A  RR   A+LD+GL R   G RVF            IPH ++       DE        
Sbjct: 93  ARARRVEEAILDIGLHRPAPGARVFAVLKGALDAGLKIPHGEEVLP----DEDR------ 142

Query: 258 RKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 413
              I G HVA+Y   L +E PE Y+  FS Y+++G+  + +   +++V   I
Sbjct: 143 ---IKGKHVAEYAEKLKEENPEAYKARFSRYLQRGLEPEKLPEHFEEVKKKI 191

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>RL18_METJA (P54044) 50S ribosomal protein L18P|
          Length = 195

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 30/104 (28%), Positives = 52/104 (50%)
 Frame = +3

Query: 102 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 281
           A+LD+GL R T GN +F            IPH           E+ L +E   + I G H
Sbjct: 101 AVLDIGLHRATKGNAIFAILKGALDAGMEIPHG----------EEILPSE---ERIRGEH 147

Query: 282 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 413
           +  Y   L +++ E+Y+  FS+Y++KG+  + +   ++++ A I
Sbjct: 148 IKAYAEMLKEQDEERYKKQFSKYLEKGLEPEKLPEHFEEIKAKI 191

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>RL18_AERPE (Q9YF94) 50S ribosomal protein L18P|
          Length = 214

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 31/104 (29%), Positives = 51/104 (49%)
 Frame = +3

Query: 102 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 281
           A+LDVGL +   G+RVF            IPHS++   G   DE+          +   H
Sbjct: 102 AVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG---DER----------VRCEH 148

Query: 282 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 413
           +A +  +L +E  E YQ  FS Y+ +G++ +++    ++V  AI
Sbjct: 149 IAQWAEALKEENAELYQRQFSRYLDRGLNPEELPGHVEEVKKAI 192

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>RL18_METMP (Q6LXD4) 50S ribosomal protein L18P|
          Length = 193

 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 32/93 (34%), Positives = 47/93 (50%)
 Frame = +3

Query: 102 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 281
           A+LD GL R T G  +F            IPH DK  A    DE+ L+         G H
Sbjct: 101 AVLDKGLHRATKGAAIFAVLKGALDAGMDIPHGDKIIA----DEERLN---------GTH 147

Query: 282 VADYMRSLADEEPEKYQTHFSEYIKKGISADDM 380
           V +Y  SL  E+ + Y+  FS+Y++KG++ +D+
Sbjct: 148 VKNYAESLK-EDADAYKKQFSKYLEKGLNPEDL 179

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>RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P|
          Length = 203

 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 30/104 (28%), Positives = 50/104 (48%)
 Frame = +3

Query: 102 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 281
           A+LD+GL     G+ VF            +PHS + F            E +R  I G H
Sbjct: 102 AILDIGLHPPVRGSSVFAVLKGAVDAGLNVPHSPEIFP-----------EDYR--IRGEH 148

Query: 282 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 413
           +A+Y R L +++ EK++  F  Y++KG+  + +   + +V A I
Sbjct: 149 IAEYARMLKEQDEEKFRRQFGGYLEKGLDPEKLPEHFDEVKARI 192

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>RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P|
          Length = 201

 Score = 49.7 bits (117), Expect = 8e-06
 Identities = 29/104 (27%), Positives = 52/104 (50%)
 Frame = +3

Query: 102 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 281
           A+LD+GL   T G+ +F            +PHS++ +            E +R  I G H
Sbjct: 102 AILDIGLHPPTRGSSIFAVLKGAVDAGLNVPHSEEIYP-----------EDYR--INGEH 148

Query: 282 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 413
           +A+Y ++L +E+   Y+  FS Y+ KG+  + +   +++V A I
Sbjct: 149 IANYAKALKEEDEALYRKQFSGYLVKGLEPEKLPEHFEEVKAKI 192

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>RL18_PYRHO (O59438) 50S ribosomal protein L18P|
          Length = 203

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 27/104 (25%), Positives = 51/104 (49%)
 Frame = +3

Query: 102 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 281
           A+LD+GL     G+ +F            +PHS + F            E +R  I G H
Sbjct: 102 AILDIGLHPPVRGSSIFAVLKGAIDAGLNVPHSPEIFP-----------EDYR--IRGEH 148

Query: 282 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 413
           +A+Y R L +++ ++++  F  Y++KG+  + +   +++V A I
Sbjct: 149 IAEYARMLKEQDEDRFRRQFGGYLEKGLDPEKLPEHFEEVKARI 192

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>RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)|
          Length = 203

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 29/104 (27%), Positives = 49/104 (47%)
 Frame = +3

Query: 102 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 281
           A+LD+GL     G+ VF            +PHS + F     DE           I G H
Sbjct: 102 AILDIGLHPPVRGSSVFAVLKGAVDAGLNVPHSPEIFP----DEYR---------IRGEH 148

Query: 282 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 413
           +A+Y + L +++ EK++  F  Y+ KG+  + +   +++V A I
Sbjct: 149 IAEYAKMLKEQDEEKFRRQFGGYLVKGLDPEKLPEHFEEVKARI 192

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>RL18_SULTO (Q975J9) 50S ribosomal protein L18P|
          Length = 196

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 28/106 (26%), Positives = 50/106 (47%)
 Frame = +3

Query: 102 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 281
           A+ D+GL     G+R+F            IP  D    G K+D            I G H
Sbjct: 102 AVADIGLFVPVKGSRIFTAIKGAIDAGLSIPVGD---LGIKEDR-----------IKGVH 147

Query: 282 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRA 419
           +A Y + L  E PE ++  FS+Y+++G+   D+ + ++++   I++
Sbjct: 148 IASYAQKLEAENPELFKRLFSKYLERGLHPKDLPSHFEEILNKIKS 193

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>RL18_NANEQ (Q74MJ4) 50S ribosomal protein L18P|
          Length = 195

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 30/104 (28%), Positives = 50/104 (48%)
 Frame = +3

Query: 102 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 281
           A+LD+G  ++T GN ++            IPHS          E  L +E     I G H
Sbjct: 101 AVLDIGRYKSTKGNALYAVLKGALDAGLNIPHS----------ETILPSE---DRIRGEH 147

Query: 282 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 413
           +A+Y + L + E E Y+  FS Y+K+G+  + +   +++V   I
Sbjct: 148 IANYAKMLKENE-ELYKKQFSRYLKEGLDPEQLPNHFEEVKQKI 190

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>RL18_METVA (P14033) 50S ribosomal protein L18P|
          Length = 195

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 29/104 (27%), Positives = 50/104 (48%)
 Frame = +3

Query: 102 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 281
           A+LD GL R T G  +F            IP  ++  A    DE+ L+         G H
Sbjct: 103 AILDKGLHRATKGAAIFAVLKGALDAGMDIPCGEEIIA----DEERLN---------GTH 149

Query: 282 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 413
           +  Y   L ++E E Y+  FS+Y++KG++ +D+   ++++   I
Sbjct: 150 IKQYAELLKEDE-EAYKKQFSKYLEKGLNPEDLPEHFEELKGKI 192

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>RL18_SULSO (Q9UX88) 50S ribosomal protein L18P|
          Length = 199

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 27/114 (23%), Positives = 48/114 (42%)
 Frame = +3

Query: 78  ADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIH 257
           A +R     + D+GL   + GNRVF            IP                D  I 
Sbjct: 97  AIKRGVTECVADIGLHVPSKGNRVFYVIKGAIDAGLKIPIG--------------DISIE 142

Query: 258 RKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRA 419
              I G H+A Y   L  E  + Y   FS Y+++G++ +++ + ++++   I++
Sbjct: 143 NDRIKGEHIAKYAEKLKSENSDLYSKLFSRYLQRGLNPENLPSHFEEILNKIKS 196

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>RL18_METTH (O26130) 50S ribosomal protein L18P|
          Length = 192

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 28/104 (26%), Positives = 46/104 (44%)
 Frame = +3

Query: 102 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 281
           A+LD+GL     G++VF            +PH +        DE           I G H
Sbjct: 101 AVLDIGLRPAIRGSKVFAALKGAVDAGLNVPHGE----SVLPDESR---------IRGEH 147

Query: 282 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 413
           + +Y  SL +EE  K    FS+Y+++G+S  D+   + ++   I
Sbjct: 148 IMEYAESLDEEELRK---RFSKYLERGLSPVDLPEHFDEIKKRI 188

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>RL18_ARCFU (O28373) 50S ribosomal protein L18P|
          Length = 189

 Score = 38.1 bits (87), Expect = 0.023
 Identities = 28/95 (29%), Positives = 40/95 (42%)
 Frame = +3

Query: 102 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 281
           A+LD+GL   T G+RVF            +PHSD+      +             I G H
Sbjct: 103 AVLDIGLHTPTRGSRVFAVLRGAVEGGLEVPHSDEVLPDDSR-------------IRGEH 149

Query: 282 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEA 386
           +A Y     +  PE+    F EY K+G+   D+ A
Sbjct: 150 IAAYY----EMNPER----FGEYEKRGLKPSDLPA 176

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>RL18_SULAC (O05640) 50S ribosomal protein L18P|
          Length = 197

 Score = 37.7 bits (86), Expect = 0.030
 Identities = 24/88 (27%), Positives = 36/88 (40%)
 Frame = +3

Query: 102 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 281
           A+ D+GL     G R+F            +P  D    G  KD            + G H
Sbjct: 102 AVSDIGLFVPVKGGRIFAVIKGAIDAGLKVPVGD---LGKLKDR-----------VNGSH 147

Query: 282 VADYMRSLADEEPEKYQTHFSEYIKKGI 365
           ++ Y + L +E  E Y   FS YI++G+
Sbjct: 148 ISAYAQKLKNENQELYNKLFSSYIQRGL 175

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>RL18_HALSA (P50562) 50S ribosomal protein L18P (HCuL18) (HSal18) (HHal18)|
           (HL13)
          Length = 182

 Score = 34.7 bits (78), Expect = 0.26
 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
 Frame = +3

Query: 102 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 281
           A+LD+GL   T G++VF            +PH+D   A + +               G H
Sbjct: 100 AVLDIGLNTATPGSKVFAIQEGAIDAGLDVPHNDSVLADWSRTR-------------GEH 146

Query: 282 VADYMRSL------ADEEPEKYQTHFSE 347
           +A+Y  SL       D +      HF E
Sbjct: 147 IAEYAESLDEPLYSGDFDATALPAHFDE 174

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>RL18_HALMA (P14123) 50S ribosomal protein L18P (Hmal18) (Hl12)|
          Length = 186

 Score = 34.3 bits (77), Expect = 0.34
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = +3

Query: 78  ADERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIH 257
           A E     A+LD+GL   T G++VF            IPH+D   A +++          
Sbjct: 92  AQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTR-------- 143

Query: 258 RKYIYGGHVADYMRSLADEEP 320
                G H+A+Y   L  EEP
Sbjct: 144 -----GAHIAEYDEQL--EEP 157

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>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3|
          Length = 623

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 31/113 (27%), Positives = 41/113 (36%), Gaps = 15/113 (13%)
 Frame = -2

Query: 300 TSCSQQHALHRCTCGESQHPETSRPS*NQQISC------------HCGECPDHRPKLP*V 157
           TSCS QH+            ++S P+ +  +S             H    P   P  P  
Sbjct: 328 TSCSYQHSPSSTVTSHPHSNQSSLPNNHSGLSATGSNSVAQVSLSHPQMHPQPSPHTP-- 385

Query: 156 HQTHGFQS*S**DQHPRAHGKASSHQQ---AQQRSPHQWPQHCLHTPHPDHGT 7
           H+ HG        QHP  H +  S  Q   +Q   PHQ   H  H P+  H T
Sbjct: 386 HRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQHPPPHQ---HIQHHPNHQHQT 435

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>ZN674_HUMAN (Q2M3X9) Zinc finger protein 674|
          Length = 581

 Score = 33.5 bits (75), Expect = 0.57
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +3

Query: 330 QTHFSEYIKKGISADDMEAVYKKVHAAIR---ADPSMAKSTKPAPKTHKRYNPKKLTYE 497
           +TH  +   KGI       +Y+++H + +   ++   A   KP+P  H R + K+  YE
Sbjct: 328 KTHIRQAFYKGIKCTTSSLIYQRIHTSEKPQCSEHGKASDEKPSPTKHWRTHTKENIYE 386

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>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3|
          Length = 622

 Score = 33.1 bits (74), Expect = 0.75
 Identities = 33/108 (30%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
 Frame = -2

Query: 315 PHLLATSCSQQHALHRCTCGESQHPETS--RPS*NQQISCHCGECPDHRPKLP*VHQTHG 142
           PH   +S S  H     T G +   + S   P  + Q S H    P HRP        HG
Sbjct: 342 PHSNQSSLSNSHGSGLNTTGSNSVAQVSLSHPQMHPQPSPH----PPHRP--------HG 389

Query: 141 FQS*S**DQHPRAHGKASSHQQA---QQRSPHQWPQHCLHTPHPDHGT 7
                    HP  H +  S  Q+   Q  SPHQ   H  H P+  H T
Sbjct: 390 LPQHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQ---HIQHHPNHQHQT 434

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>SRYD_DROME (P07664) Serendipity locus protein delta|
          Length = 433

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = +3

Query: 198 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 377
           +D  F    KD++  D EI R+++             DEE E+      E+I + +   D
Sbjct: 126 ADALFVELVKDQEESDTEIKREFV-------------DEEEEEDDDDDDEFICEDVDVGD 172

Query: 378 MEAVYKK 398
            EA+Y K
Sbjct: 173 SEALYGK 179

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>MYF6_FUGRU (Q6SYV5) Myogenic factor 6 (Myf-6) (Muscle-specific regulatory|
           factor 4)
          Length = 239

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -3

Query: 194 GNVQTTVQSSLKCTKHTVSSRSPDKTNIQE 105
           GN +++  SSL C    VSS S DKTN+++
Sbjct: 205 GNCESSATSSLLCLSSIVSSISDDKTNLRQ 234

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>FPRB_MYCLE (O33064) Probable ferredoxin/ferredoxin--NADP reductase (EC|
           1.18.1.2) (FNR)
          Length = 555

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +3

Query: 36  GNVEATGEDFSVEPADERRPFRALLDVGLIRTTTGNR 146
           GN  ATG +FSV   +E R F    D GL+ T+ G R
Sbjct: 381 GNQRATGVEFSVTGTEESRRF----DAGLVLTSVGYR 413

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>ZEP1_HUMAN (P15822) Zinc finger protein 40 (Human immunodeficiency virus type I|
            enhancer-binding protein 1) (HIV-EP1) (Major
            histocompatibility complex-binding protein 1) (MBP-1)
            (Positive regulatory domain II-binding factor 1)
            (PRDII-BF1)
          Length = 2717

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 6/38 (15%)
 Frame = -3

Query: 185  QTTVQSSLKCTKHTVSSRSP------DKTNIQERTERP 90
            + T  S LKCT +    +SP      DK NIQE+++RP
Sbjct: 1878 ENTHLSPLKCTDNNQERKSPGVKNQGDKVNIQEQSQRP 1915

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>JHD2A_MOUSE (Q6PCM1) JmjC domain-containing histone demethylation protein 2A|
           (EC 1.14.11.-) (Jumonji domain-containing protein 1A)
          Length = 1323

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -3

Query: 221 ETSKSLVTVGNVQTTV--QSSLKCTKHTVSSRSPDKTNIQERTERPPLI 81
           E S S+  V +V TTV  +  L CT  T SS+ P + N  +    PP I
Sbjct: 281 EASPSMCPVQSVPTTVFKEILLGCTAATPSSKDPRQQNTPQAANSPPNI 329

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>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind) (L(1)omb)|
            (Protein bifid)
          Length = 972

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -2

Query: 114  HPRAHGKASSHQQAQQRSPHQWPQHCLHTPHPDHGT 7
            H +AH +   HQ   Q+  HQ P      PHP H T
Sbjct: 926  HTQAHHQQQQHQSHHQQQHHQQPAQ----PHPHHQT 957

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>UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstream binding|
           factor 1-A) (UBF-1-A) (xUBF-1)
          Length = 677

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +3

Query: 288 DYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPK 458
           DY + LA+++   Y+T F  ++ KG+S+ D  A YK+ ++  R   S AK   P  K
Sbjct: 531 DYYKKLAEDQQRVYRTQFDTWM-KGLSSQD-RAAYKEQNSNKR--KSTAKIQVPVAK 583

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>CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (Solute carrier|
           family 7 member 3) (Cationic amino acid transporter y+)
          Length = 618

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -3

Query: 338 VSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLLETSKSLVT 198
           +S  L G ++   PHV++  P    LA+ L +  LLVL  +  +LVT
Sbjct: 144 ISRTLKGTILLKMPHVLAEYPDFFALALVLLLTGLLVLGASKSALVT 190

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>SCNNB_RAT (P37090) Amiloride-sensitive sodium channel beta-subunit|
           (Epithelial Na+ channel beta subunit) (Beta ENaC)
           (Nonvoltage-gated sodium channel 1 beta subunit) (SCNEB)
           (Beta NaCH)
          Length = 638

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 339 SEFGTSRVPHLLATSCSQQHALHRCTCGESQHP 241
           S++ T+        SC Q H +H C+CG   +P
Sbjct: 373 SDYNTTYSIQACLHSCFQDHMIHNCSCGHYLYP 405

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>NIPB_DROME (Q7PLI2) Nipped-B protein (SCC2 homolog)|
          Length = 2077

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +3

Query: 3    LKSRDLDEEYEGNVEATGEDFSVEPADERRPF--RALLDVGLIRTTTGNRVF 152
            ++S  L++E EG+V +  + F +EP ++R  F  + LLD   +     N ++
Sbjct: 937  IQSIKLEQEKEGDVTSNNDQFDLEPEEQRTDFLQKILLDFLAVNAQEENLIW 988

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>NCKP1_ORYSA (Q6ZBH9) Probable protein NAP1 (Nck-associated protein 1)|
           (P125Nap1) (NAP of plants)
          Length = 1359

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
 Frame = -3

Query: 401 NLLVNCFHVIS*DSLLDVLTEVSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLL 222
           ++L N  H +    L +V +    VLLG+L+C  P  +  + SIDV  V L    +L L 
Sbjct: 291 DILTNSAHPMRAQDLANVTSYREWVLLGYLVC--PDELLRVTSIDVAMVVLKENLVLSLF 348

Query: 221 ETSKSLVTVGNVQTTVQSSLKCTKHTVSSRSPDKT-----NIQERTERPPLISRLNREVL 57
                L+        +   L+  +   S R+  K      N+ ++ E+  ++  ++ + L
Sbjct: 349 RDEYILLHENYQLYVLPKVLESKRMAKSGRTKQKEADLEYNVAKQVEK--MLMEVHEQAL 406

Query: 56  TS 51
            S
Sbjct: 407 VS 408

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>NCKP1_ARATH (Q5S2C4) Protein NAP1 (Nck-associated protein 1) (AtNAP1)|
           (AtNAP125) (p125Nap1) (NAP of plants) (ARP2/3 regulatory
           protein subunit NAPP) (Protein GNARLED)
          Length = 1425

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = -3

Query: 401 NLLVNCFHVIS*DSLLDVLTEVSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLL 222
           ++L N  H +    L +V +    VLLG+L+C  P  +  + SID+  V L    ++ L 
Sbjct: 302 DILTNSAHPMRAQDLANVTSYREWVLLGYLVC--PDELLRVTSIDIALVVLKENLVVTLF 359

Query: 221 ETSKSL 204
               SL
Sbjct: 360 RDEVSL 365

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>RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)|
          Length = 101

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +3

Query: 348 YIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 524
           Y +K +   D        HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 30  YARKRLVIQDKNKYNTPAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 87

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>ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)|
           (Alpha-ketoglutarate dehydrogenase)
          Length = 928

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 10/103 (9%)
 Frame = +3

Query: 195 HSDKRFAGFKKDEKSLDAEIHRKYIYGG-------HVADYMRSLADEEPEKYQTHFSEYI 353
           H D  F G     +SL       Y  GG       +   +  + AD    +Y T F++ I
Sbjct: 350 HGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRASRYSTEFAKII 409

Query: 354 KKGI---SADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRY 473
              I   + DD+EAV K  + A+       K        +++Y
Sbjct: 410 AAPILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKY 452

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>VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein VTA1|
           (VPS20-associated protein 1)
          Length = 330

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 25/84 (29%), Positives = 40/84 (47%)
 Frame = +3

Query: 306 ADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKK 485
           AD   E+ QT   +  +  I+ D+ + V K+V     + PS     +PA   HK Y   +
Sbjct: 231 ADSVNEEEQT--VDKNEDAITKDEQQVVKKEVDLTRPSAPS-----EPAAAEHKSYTKDE 283

Query: 486 LTYEERKASLVERLNALNNSAGAA 557
           LT    +AS +E++  L   A +A
Sbjct: 284 LTKIMDRASKIEQIQKLAKYAISA 307


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,156,827
Number of Sequences: 219361
Number of extensions: 1602332
Number of successful extensions: 6268
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 5811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6217
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result