Clone Name	bags22g08
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxiso...	193	2e-49
2	PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxi...	193	2e-49
3	PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	193	3e-49
4	PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxi...	192	5e-49
5	PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)	189	3e-48
6	PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)	188	1e-47
7	PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	187	2e-47
8	PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)	187	2e-47
9	PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	185	6e-47
10	PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	185	6e-47
11	PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)	185	8e-47
12	PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)	182	5e-46
13	PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)	179	4e-45
14	PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)	179	4e-45
15	PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)	178	1e-44
16	CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val...	142	6e-34
17	CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog	138	1e-32
18	TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h...	136	3e-32
19	CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ...	136	4e-32
20	TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h...	134	2e-31
21	TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER...	133	3e-31
22	TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER...	133	3e-31
23	TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T...	133	3e-31
24	TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T...	133	3e-31
25	CD48A_ARATH (P54609) Cell division control protein 48 homolog A ...	133	4e-31
26	TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T...	130	2e-30
27	CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h...	130	2e-30
28	CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48	128	9e-30
29	SAV_SULAC (Q07590) SAV protein	126	4e-29
30	CDC48_YEAST (P25694) Cell division control protein 48	126	5e-29
31	Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156	123	3e-28
32	CDAT_PLAF7 (P46468) Putative cell division cycle ATPase	121	1e-27
33	PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxi...	117	3e-26
34	PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxi...	116	4e-26
35	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	116	5e-26
36	NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nucl...	115	6e-26
37	VAT_THEAC (O05209) VCP-like ATPase	115	1e-25
38	CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ...	114	2e-25
39	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	110	2e-24
40	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	110	3e-24
41	CDCH_HALSA (Q9HPF0) Protein cdcH	110	3e-24
42	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	109	4e-24
43	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	109	6e-24
44	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	108	8e-24
45	PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (...	108	1e-23
46	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	108	1e-23
47	RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7	108	1e-23
48	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	108	1e-23
49	NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nucl...	107	2e-23
50	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	105	6e-23
51	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	105	6e-23
52	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	105	6e-23
53	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	105	6e-23
54	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	105	6e-23
55	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	105	6e-23
56	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	105	6e-23
57	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	104	2e-22
58	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	104	2e-22
59	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	103	3e-22
60	FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3....	103	3e-22
61	FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3....	103	4e-22
62	TBP7_YEAST (P40340) TAT-binding homolog 7	103	4e-22
63	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	103	4e-22
64	FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3....	102	5e-22
65	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	102	7e-22
66	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	102	7e-22
67	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	101	1e-21
68	PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteaso...	101	1e-21
69	AFG2_YEAST (P32794) Protein AFG2	100	3e-21
70	PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso...	100	4e-21
71	PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso...	100	5e-21
72	FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2...	99	6e-21
73	ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2	99	6e-21
74	CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B ...	99	1e-20
75	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	99	1e-20
76	FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2...	98	1e-20
77	FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2...	98	1e-20
78	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	98	1e-20
79	PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso...	98	2e-20
80	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	97	2e-20
81	FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2...	97	2e-20
82	PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso...	97	4e-20
83	FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2...	97	4e-20
84	FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2...	96	5e-20
85	ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2	96	7e-20
86	PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S prote...	96	7e-20
87	PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S prote...	96	7e-20
88	FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2...	96	9e-20
89	PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S prote...	96	9e-20
90	PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S prote...	96	9e-20
91	ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2	96	9e-20
92	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	95	1e-19
93	PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso...	95	1e-19
94	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	92	7e-19
95	PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Prote...	92	7e-19
96	SEC18_YEAST (P18759) Vesicular-fusion protein SEC18	92	7e-19
97	PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso...	92	7e-19
98	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	92	1e-18
99	PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso...	92	1e-18
100	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	91	2e-18
101	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	91	2e-18
102	PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7	91	3e-18
103	PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Prote...	91	3e-18
104	TBP7_CAEEL (P54816) TAT-binding homolog 7	91	3e-18
105	PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 prot...	90	4e-18
106	PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)	90	5e-18
107	PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 prot...	90	5e-18
108	PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 prot...	90	5e-18
109	NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	90	5e-18
110	NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	90	5e-18
111	NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	90	5e-18
112	PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteaso...	90	5e-18
113	AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as...	89	6e-18
114	PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog	89	1e-17
115	NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleim...	89	1e-17
116	PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteaso...	89	1e-17
117	PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso...	88	1e-17
118	NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	88	1e-17
119	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	88	2e-17
120	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	88	2e-17
121	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	88	2e-17
122	PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog ...	87	3e-17
123	KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E...	87	3e-17
124	PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S1...	87	3e-17
125	PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteaso...	87	4e-17
126	PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteaso...	87	4e-17
127	PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome ...	87	4e-17
128	PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome ...	87	4e-17
129	PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasom...	87	4e-17
130	PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasom...	87	4e-17
131	PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasom...	87	4e-17
132	SEC18_CANAL (P34732) Vesicular-fusion protein SEC18	87	4e-17
133	NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	87	4e-17
134	YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo...	86	5e-17
135	KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC ...	86	5e-17
136	KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (E...	86	7e-17
137	PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (C...	86	9e-17
138	PRS8_DROME (O18413) 26S protease regulatory subunit 8	85	1e-16
139	PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 pro...	85	1e-16
140	PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homo...	85	2e-16
141	FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.2...	85	2e-16
142	FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.2...	85	2e-16
143	NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleim...	85	2e-16
144	SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog	84	2e-16
145	PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog ...	84	2e-16
146	FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2...	84	3e-16
147	PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-bindi...	84	3e-16
148	PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteaso...	83	4e-16
149	PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-bindi...	83	6e-16
150	PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-bin...	83	6e-16
151	PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (S...	83	6e-16
152	PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog ...	83	6e-16
153	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	82	8e-16
154	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	82	8e-16
155	PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-bin...	82	8e-16
156	PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog ...	82	1e-15
157	KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3...	81	2e-15
158	PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (T...	81	2e-15
159	YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)	81	2e-15
160	PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote...	80	3e-15
161	PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote...	80	3e-15
162	PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote...	80	3e-15
163	PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-b...	80	3e-15
164	KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3...	80	3e-15
165	KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-lik...	80	4e-15
166	KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like ...	80	4e-15
167	PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (P...	80	5e-15
168	PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (P...	80	5e-15
169	PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (T...	80	5e-15
170	PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease sub...	80	5e-15
171	KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-lik...	80	5e-15
172	PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog ...	79	8e-15
173	PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog ...	79	8e-15
174	PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase ...	79	1e-14
175	PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog	79	1e-14
176	YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3....	78	2e-14
177	PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog	78	2e-14
178	YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3....	77	2e-14
179	PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (T...	77	4e-14
180	PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog	76	5e-14
181	PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)	76	7e-14
182	PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Pro...	75	2e-13
183	PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (P...	75	2e-13
184	PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (P...	75	2e-13
185	YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4....	75	2e-13
186	PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-bindi...	74	2e-13
187	PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)...	74	2e-13
188	PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (P...	74	2e-13
189	PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B	73	6e-13
190	PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)...	73	6e-13
191	PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog	72	8e-13
192	PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4	72	1e-12
193	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	72	1e-12
194	PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-bin...	72	1e-12
195	ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1	72	1e-12
196	ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1	72	1e-12
197	ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1	72	1e-12
198	Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c	72	1e-12
199	Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175	72	1e-12
200	Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316	72	1e-12
201	PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog ...	71	2e-12
202	KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3...	71	2e-12
203	PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4	70	3e-12
204	PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A	70	3e-12
205	PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-b...	70	5e-12
206	VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a	69	9e-12
207	VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) ...	69	9e-12
208	MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC ...	67	3e-11
209	ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein...	67	3e-11
210	VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants	65	1e-10
211	MSP1_CAEEL (P54815) Protein MSP1 homolog	65	1e-10
212	MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)	65	2e-10
213	SPAST_MOUSE (Q9QYY8) Spastin	64	2e-10
214	SPAST_HUMAN (Q9UBP0) Spastin	64	2e-10
215	YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)	64	3e-10
216	VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)	64	3e-10
217	VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein ...	64	4e-10
218	VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)	62	8e-10
219	ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein...	62	1e-09
220	FTSH_CHLVU (P56369) Cell division protein ftsH homolog	62	1e-09
221	PRS2_METJA (Q58889) Putative 26S protease regulatory subunit hom...	59	7e-09
222	YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)	59	1e-08
223	Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL	56	6e-08
224	BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-...	53	6e-07
225	PRS2_METTM (P42811) Putative 26S protease regulatory subunit hom...	52	8e-07
226	PRS2_METTH (O27092) Putative 26S protease regulatory subunit hom...	52	1e-06
227	YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46	52	1e-06
228	TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-bind...	48	2e-05
229	YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)	47	4e-05
230	BCS1_YEAST (P32839) Mitochondrial chaperone BCS1	46	8e-05
231	AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)	45	2e-04
232	YCF2_ANTFO (Q859W7) Protein ycf2	42	0.001
233	YCF2_MARPO (P09975) Protein ycf2	40	0.003
234	YCF2_PHYPA (P61243) Protein ycf2	39	0.007
235	SAP1_YEAST (P39955) Protein SAP1	37	0.028
236	CLPB2_SYNPX (Q7U3T3) Chaperone clpB 2	36	0.082
237	BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like prot...	35	0.11
238	BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like prot...	35	0.14
239	YCF2_ADICA (Q85B60) Protein ycf2	34	0.24
240	TILS_MESFL (Q6F0E4) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR...	34	0.31
241	BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like prot...	34	0.31
242	YOBD_SALTI (Q8Z671) UPF0266 membrane protein yobD	33	0.41
243	BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like prot...	33	0.41
244	YOBD_SALTY (Q8ZP01) UPF0266 membrane protein yobD	33	0.53
245	CLPB_NITEU (Q82SD8) Chaperone clpB	32	1.5
246	TRMB_BURPS (Q63RN0) tRNA (guanine-N(7)-)-methyltransferase (EC 2...	32	1.5
247	TRMB_BURP1 (Q3JPL2) tRNA (guanine-N(7)-)-methyltransferase (EC 2...	32	1.5
248	TRMB_BURMA (Q62HT7) tRNA (guanine-N(7)-)-methyltransferase (EC 2...	32	1.5
249	CCC1_YEAST (P47818) Protein CCC1	31	2.0
250	YOBD_ECOLI (P67601) UPF0266 membrane protein yobD	31	2.6
251	YOBD_ECOL6 (P67602) UPF0266 membrane protein yobD	31	2.6
252	YOBD_ECO57 (Q8XCP5) UPF0266 membrane protein yobD	31	2.6
253	VE1_HPV61 (Q80950) Replication protein E1 (EC 3.6.1.-) (ATP-depe...	31	2.6
254	YOBD_SHIFL (Q83L78) UPF0266 membrane protein yobD	31	2.6
255	CLPB_BORPE (Q7VYV6) Chaperone clpB	30	4.5
256	CBLB_XENTR (Q6DFR2) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2....	30	5.9
257	CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3...	30	5.9
258	CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3...	30	5.9
259	CEBP_DROME (Q02637) CCAAT/enhancer-binding protein (C/EBP) (Slow...	29	10.0
260	VHS_HHV2H (P68340) Virion host shutoff protein	29	10.0
261	VHS_HHV2G (P68339) Virion host shutoff protein	29	10.0
262	DNAK_COXBU (O87712) Chaperone protein dnaK (Heat shock protein 7...	29	10.0

---

>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 978

 Score =  193 bits (491), Expect = 2e-49
 Identities = 93/148 (62%), Positives = 120/148 (81%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
            +F +AR+A PC+IFFDELDSLAP+RG S DSGGVMDRVVSQLL E+DGL  ++QD+F+IG
Sbjct: 786  VFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-STQDVFVIG 844

Query: 221  ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
            ATNRPDLLD ALLRPGRFDKL+++G + + + + R+L A TRK+KL  +VSL+++   CP
Sbjct: 845  ATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCP 904

Query: 401  PNFTGADIYALCADAWFHAAKRSVKTLE 484
            P  TGAD+Y+LC+DA   A KR V+ LE
Sbjct: 905  PQLTGADLYSLCSDAMMTALKRRVRDLE 932

---

>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 980

 Score =  193 bits (491), Expect = 2e-49
 Identities = 97/168 (57%), Positives = 127/168 (75%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
            +F +AR+A PC+IFFDELDSLAP+RG S DSGGVMDRVVSQLL E+DGL  ++QD+F+IG
Sbjct: 788  VFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-STQDVFVIG 846

Query: 221  ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
            ATNRPDLLD ALLRPGRFDKL+++G N + + + R+L A TRK+KL  +VSL+++   CP
Sbjct: 847  ATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCP 906

Query: 401  PNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETED 544
            P  TGAD+Y+LC+DA   A KR V  LE       + G+  +++  ED
Sbjct: 907  PQLTGADLYSLCSDAMTAALKRRVHDLE----EGLEPGSSALMLTMED 950

---

>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS8)
          Length = 1030

 Score =  193 bits (490), Expect = 3e-49
 Identities = 91/162 (56%), Positives = 123/162 (75%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
            +F+KAR A+PCVIFFDE+DS+AP RG+  DSGGVMDR+VSQLL E+DG+S ++  +F+IG
Sbjct: 816  VFQKAREAKPCVIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVIG 875

Query: 221  ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
            ATNRPDLLD ALLRPGRFDKLLY+G+    + +  IL+A TRK+ L  +V L+ +A+ CP
Sbjct: 876  ATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCP 935

Query: 401  PNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEV 526
             N+TGAD YALC+DA  +A  R  + +E   S++N+   E +
Sbjct: 936  FNYTGADFYALCSDAMLNAMSRIARMVEKKVSQHNELTGENI 977

---

>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 981

 Score =  192 bits (488), Expect = 5e-49
 Identities = 93/148 (62%), Positives = 119/148 (80%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
            +F +AR+A PC+IFFDELDSLAP+RG S DSGGVMDRVVSQLL E+DGL  ++QD+F+IG
Sbjct: 789  VFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-STQDVFVIG 847

Query: 221  ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
            ATNRPDLLD ALLRPGRFDKL+++G + + + + R+L A TRK+KL  +VSL ++   CP
Sbjct: 848  ATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCP 907

Query: 401  PNFTGADIYALCADAWFHAAKRSVKTLE 484
            P  TGAD+Y+LC+DA   A KR V+ LE
Sbjct: 908  PQLTGADLYSLCSDAMMTALKRRVRDLE 935

---

>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 948

 Score =  189 bits (481), Expect = 3e-48
 Identities = 98/172 (56%), Positives = 126/172 (73%), Gaps = 4/172 (2%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLS-DNSQDLFII 217
            +FEKAR++ PCVIFFDELDS+AP RG+S+DSG VMDRVVSQLL E+D +S DN++ +F+I
Sbjct: 739  VFEKARNSSPCVIFFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVI 798

Query: 218  GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            GATNRPDLLD +LLRPGRFDKL+Y+G+N     +  +L+A T+ +KL E + L  IA++C
Sbjct: 799  GATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNC 858

Query: 398  PPNFTGADIYALCADAWFHAAKRSVKTLEAD---PSRNNDAGAEEVIVETED 544
             PNFTGAD+YALC+DA   A KR  KT E D    +   D   EE     E+
Sbjct: 859  HPNFTGADMYALCSDAVLSAIKR--KTNEIDLLIQASGTDLSTEEFFKRNEN 908

---

>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1000

 Score =  188 bits (477), Expect = 1e-47
 Identities = 87/142 (61%), Positives = 110/142 (77%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
            +F+KAR A+PCVIFFDELDS+AP RG+  DSGGVMDR+VSQLL E+DG+S     +F+IG
Sbjct: 786  VFQKARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSGGDGVFVIG 845

Query: 221  ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
            ATNRPDLLD ALLRPGRFDK+LY+G++     +  I+KA TRK+ L   + +L IA+ CP
Sbjct: 846  ATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLESGIDILDIAKKCP 905

Query: 401  PNFTGADIYALCADAWFHAAKR 466
             N+TGAD YALC+DA  +A  R
Sbjct: 906  FNYTGADFYALCSDALLNAMTR 927

---

>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)|
          Length = 1388

 Score =  187 bits (475), Expect = 2e-47
 Identities = 92/152 (60%), Positives = 117/152 (76%), Gaps = 3/152 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLS---DNSQDLF 211
            +F++AR ARPCV+FFDELDS+AP RG+  DSGGVMDR+VSQLL E+DG+S   D S  +F
Sbjct: 1078 VFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGDDTSGGVF 1137

Query: 212  IIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQ 391
            +IGATNRPDLLD ALLRPGRFDK+LY+GV+     + +IL+A TRK+ LH +VSL S+AQ
Sbjct: 1138 VIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLHPSVSLHSVAQ 1197

Query: 392  HCPPNFTGADIYALCADAWFHAAKRSVKTLEA 487
              P  +TGAD YALC+DA   A  R   +++A
Sbjct: 1198 QLPFTYTGADFYALCSDAMLKAVTRQAASVDA 1229

---

>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1198

 Score =  187 bits (474), Expect = 2e-47
 Identities = 92/170 (54%), Positives = 124/170 (72%), Gaps = 8/170 (4%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQD----L 208
            +F+KAR A+PCVIFFDELDS+AP RG+  DSGGVMDR+VSQLL E+DG+S  ++     +
Sbjct: 923  VFQKARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGAEGGGDGV 982

Query: 209  FIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIA 388
            F++GATNRPDLLD ALLRPGRFDK+LY+G++     + +IL+A TRK+KL +NV L  IA
Sbjct: 983  FVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQSKILEALTRKFKLADNVDLYEIA 1042

Query: 389  QHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNND----AGAEEV 526
            + C   FTGAD YALC+D+  +A  R+   ++A   + N+     G EE+
Sbjct: 1043 KRCSFTFTGADFYALCSDSMLNAMTRTANEVDAKIKKLNEELTSQGKEEI 1092

---

>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAY4)
          Length = 1024

 Score =  185 bits (470), Expect = 6e-47
 Identities = 89/167 (53%), Positives = 125/167 (74%), Gaps = 4/167 (2%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSD-NSQDLFII 217
            +F+KAR A+PCV+FFDELDS+AP RG+  DSGGVMDR+VSQLL E+DG+S    + +F++
Sbjct: 803  VFQKARDAKPCVVFFDELDSVAPQRGNQGDSGGVMDRIVSQLLAELDGMSTAGGEGVFVV 862

Query: 218  GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            GATNRPDLLD ALLRPGRFDK+LY+G++     ++ I++A TRK++L  +VSL +I++ C
Sbjct: 863  GATNRPDLLDEALLRPGRFDKMLYLGISDTHEKQQTIMEALTRKFRLAADVSLEAISKRC 922

Query: 398  PPNFTGADIYALCADAWFHAAKRSVKTLEAD---PSRNNDAGAEEVI 529
            P  FTGAD YALC+DA  +A  R+   ++A     ++N +   EE +
Sbjct: 923  PFTFTGADFYALCSDAMLNAMTRTANEVDAKIKLLNKNREEAGEEPV 969

---

>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS5)
          Length = 1165

 Score =  185 bits (470), Expect = 6e-47
 Identities = 90/168 (53%), Positives = 121/168 (72%), Gaps = 2/168 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLS--DNSQDLFI 214
            +F++AR A+PCV+FFDELDS+AP RG+  DS GVMDR+VSQLL E+DG+S  D    +F+
Sbjct: 903  VFQRARDAKPCVVFFDELDSVAPKRGNQGDSEGVMDRIVSQLLAELDGMSGGDGGDGVFV 962

Query: 215  IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
            +GATNRPDLLD ALLRPGRFDK+LY+GV+     + +I++A +RK+ LH +V L  +A+ 
Sbjct: 963  VGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDLDKVAES 1022

Query: 395  CPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVET 538
            CP  FTGAD YALC+DA  +A  R   T++    R N+   E+  V T
Sbjct: 1023 CPFTFTGADFYALCSDAMLNAMTRIANTVDEKIKRYNEELPEKSQVST 1070

---

>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1021

 Score =  185 bits (469), Expect = 8e-47
 Identities = 91/157 (57%), Positives = 114/157 (72%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
            +F++AR A+PCVIFFDELDS+AP RG+  DSGGVMDR+VSQLL E+DGLS     LF+IG
Sbjct: 807  VFQRARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGLSTGGDGLFVIG 866

Query: 221  ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
            ATNRPDLLD ALLRPGRFDKLLY+G++     +  IL+A TRK+ L  +VSL  +A  CP
Sbjct: 867  ATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPDVSLDDLAASCP 926

Query: 401  PNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDA 511
              +TGAD YALC+DA  +A  R    ++   +  N A
Sbjct: 927  FTYTGADFYALCSDAMLNAMTRIAGNVDEKVASYNRA 963

---

>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1459

 Score =  182 bits (462), Expect = 5e-46
 Identities = 88/151 (58%), Positives = 116/151 (76%), Gaps = 3/151 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLS---DNSQDLF 211
            +F++AR ARPCV+FFDELDS+AP RG+  DSGGVMDR+VSQLL E+DG++   +NS  +F
Sbjct: 1114 VFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVF 1173

Query: 212  IIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQ 391
            +IGATNRPDLLD+ALLRPGRFDK+LY+GV+     +  IL+A TRK+ LH +VSL  +A+
Sbjct: 1174 VIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPDVSLDRVAE 1233

Query: 392  HCPPNFTGADIYALCADAWFHAAKRSVKTLE 484
              P  +TGAD+YALC+DA   A  R    ++
Sbjct: 1234 QLPLTYTGADLYALCSDAMLKAITRKATAVD 1264

---

>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1135

 Score =  179 bits (455), Expect = 4e-45
 Identities = 86/150 (57%), Positives = 114/150 (76%), Gaps = 2/150 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLS--DNSQDLFI 214
            +F+KAR A+PCVIFFDELDS+AP RG+  DSGGVMDR+VSQLL E+DG+S  +    +F+
Sbjct: 897  VFQKARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGAEGGDGVFV 956

Query: 215  IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
            +GATNRPDLLD ALLRPGRFDK+LY+G+      + +I++A TRK++L  +V L  IA+ 
Sbjct: 957  VGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQLDPSVDLGRIAET 1016

Query: 395  CPPNFTGADIYALCADAWFHAAKRSVKTLE 484
            CP  +TGAD YALC+DA  +A  R+   +E
Sbjct: 1017 CPFTYTGADFYALCSDAMLNAMTRTAGAVE 1046

---

>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1381

 Score =  179 bits (455), Expect = 4e-45
 Identities = 90/164 (54%), Positives = 114/164 (69%), Gaps = 3/164 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQD---LF 211
            +F++AR ARPCV+FFDELDS+AP RG+  DSGGVMDR+VSQLL E+DG+S        +F
Sbjct: 1075 VFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGEGGGGGVF 1134

Query: 212  IIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQ 391
            +IGATNRPDLLD ALLRPGRFDK+LY+GV+     +  I++A TRK+ LH  VSL S+A+
Sbjct: 1135 VIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRKFTLHPTVSLRSVAE 1194

Query: 392  HCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEE 523
              P  +TGAD YALC+DA   A  R    ++      N A   E
Sbjct: 1195 RLPFTYTGADFYALCSDAMLKAVTRQATLVDTKIRELNAAAGPE 1238

---

>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1017

 Score =  178 bits (451), Expect = 1e-44
 Identities = 91/186 (48%), Positives = 122/186 (65%), Gaps = 17/186 (9%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
            +F+KAR A+PCVIFFDE+DS+AP RG+  DSGGVMDR+VSQLL E+DG+S +   +FIIG
Sbjct: 802  VFQKARDAKPCVIFFDEVDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSDGDGVFIIG 861

Query: 221  ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
            ATNRPDLLD ALLRPGRFDKL+Y+G+      +  I++A TRK+K+  +++   +    P
Sbjct: 862  ATNRPDLLDEALLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSDINFDELVSDFP 921

Query: 401  PNFTGADIYALCADAWFHAAKRSVKTLEADPSR-NNDAGAE----------------EVI 529
             ++TGAD YALC+DA   A  R  K ++    + N D G                  +VI
Sbjct: 922  FSYTGADFYALCSDAMLKAMTRISKEIDEKVDKYNQDNGTSISIRYWFDHVCSDEDTDVI 981

Query: 530  VETEDF 547
            V+ EDF
Sbjct: 982  VKKEDF 987

---

>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
            protein homolog) (VCP)
          Length = 807

 Score =  142 bits (358), Expect = 6e-34
 Identities = 84/170 (49%), Positives = 116/170 (68%), Gaps = 3/170 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSA-DSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
            IF+KAR + PCV+FFDELDS+A  RGSS  D+GG  DRV++QLL E+DG+S   + +FII
Sbjct: 566  IFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAK-KTVFII 624

Query: 218  GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            GATNRPD++D ALLRPGR D+L+YI +  E S R +I KA  RK  + +NV L ++A+H 
Sbjct: 625  GATNRPDIIDPALLRPGRLDQLIYIPLPDEDS-RHQIFKACLRKSPIAKNVDLRALARH- 682

Query: 398  PPNFTGADIYALCADAWFHAAKRSV-KTLEAD-PSRNNDAGAEEVIVETE 541
               F+GADI  +C  A  +A + ++ K +E +  SR N    +E  V+ E
Sbjct: 683  TQGFSGADITEICQRACKYAIRENIEKDIERERKSRENPEAMDEDTVDDE 732



 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 62/168 (36%), Positives = 92/168 (54%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           FE+A    P +IF DE+DS+AP R  +   G V  R+VSQLL  +DGL   +  + +IGA
Sbjct: 294 FEEAEKNAPSIIFIDEIDSIAPKREKT--HGEVERRIVSQLLTLMDGLKSRAH-VIVIGA 350

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRP+ +D AL R GRFD+ + IGV  E   R  +L+  T+  KL ++V L  IA+    
Sbjct: 351 TNRPNSIDPALRRFGRFDREIDIGVPDEVG-RLEVLRIHTKNMKLSDDVDLERIAKD-TH 408

Query: 404 NFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
            + GAD+ ALC +A     +  +  ++ +    +      + V  E F
Sbjct: 409 GYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHF 456

---

>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score =  138 bits (347), Expect = 1e-32
 Identities = 80/166 (48%), Positives = 116/166 (69%), Gaps = 4/166 (2%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSA-DSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
            IF+KAR + PCV+FFDELDS+A  RGSS+ D+GG  DRV++QLL E+DG++   + +FII
Sbjct: 566  IFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAK-KTVFII 624

Query: 218  GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            GATNRPD++D ALLRPGR D+L+YI +  E S R +I KA  RK  L +++ L ++A+H 
Sbjct: 625  GATNRPDIIDPALLRPGRLDQLIYIPLPDEDS-RHQIFKACLRKSPLSKDIDLRALAKH- 682

Query: 398  PPNFTGADIYALCADAWFHAAKRSV-KTLEADPSR--NNDAGAEEV 526
               F+GAD+  +C  A  +A + ++ K +E +  R  N D+  E+V
Sbjct: 683  TQGFSGADVTEICQRACKYAIRENIEKDIEREKRRQENPDSMDEDV 728



 Score = 95.5 bits (236), Expect = 9e-20
 Identities = 62/168 (36%), Positives = 90/168 (53%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           FE+A    P +IF DE+DS+AP R  +   G V  R+VSQLL  +DGL   +  + ++GA
Sbjct: 294 FEEAEKNAPSIIFIDEIDSIAPKREKT--HGEVERRIVSQLLTLMDGLKSRAH-VIVMGA 350

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRP+ +D AL R GRFD+ + IGV  E   R  +L   T+  KL E V L  I++    
Sbjct: 351 TNRPNSIDPALRRFGRFDREIDIGVPDEVG-RLEVLGIHTKNMKLAEEVDLERISKD-TH 408

Query: 404 NFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
            + GAD+ ALC +A     +  +  L+ +    +      + V  E F
Sbjct: 409 GYVGADLAALCTEAALQCIREKMDVLDLEDDTIDAEVLNSMAVTNEHF 456

---

>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
            (p97/CDC48 homolog 1)
          Length = 809

 Score =  136 bits (343), Expect = 3e-32
 Identities = 77/170 (45%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSA--DSGGVMDRVVSQLLVEIDGLSDNSQDLFI 214
            +F+KAR+A PCV+FFDELDS+A ARG  A  D GG  DRV++Q+L E+DG++   +++FI
Sbjct: 568  VFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAK-KNVFI 626

Query: 215  IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
            IGATNRPD++D A+LRPGR D+L+YI +  EAS R +ILKA  RK  L +++ L  +A++
Sbjct: 627  IGATNRPDIIDPAVLRPGRLDQLIYIPLPDEAS-RHQILKASLRKTPLSKDLDLTFLAKN 685

Query: 395  CPPNFTGADIYALCADAWFHAAKRSV-KTLEADPSRNNDAGAEEVIVETE 541
                F+GAD+  +C  A   A + S+ K +  +  R +     E ++E +
Sbjct: 686  -TVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDD 734



 Score =  100 bits (248), Expect = 4e-21
 Identities = 60/168 (35%), Positives = 98/168 (58%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           FE+    +P ++F DE+D++AP R  +  +G V  R+VSQLL  +DG+   S +L +I A
Sbjct: 296 FEECEKNQPAILFIDEIDAIAPKREKT--NGEVERRIVSQLLTLMDGVKGRS-NLVVIAA 352

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRP+ +D AL R GRFD+ + IG+  +A  R  IL+  T+  KL ++V L  IA  C  
Sbjct: 353 TNRPNSIDGALRRFGRFDREIDIGI-PDAVGRLEILRIHTKNMKLADDVDLEQIANEC-H 410

Query: 404 NFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
            F GAD+ +LC++A     +  ++ ++ +  + +      + V  E+F
Sbjct: 411 GFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTMENF 458

---

>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
            (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score =  136 bits (342), Expect = 4e-32
 Identities = 81/170 (47%), Positives = 118/170 (69%), Gaps = 3/170 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSA-DSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
            IF+KAR + PCV+FFDELDS+A  RG+SA D+GG  DRV++QLL E+DG++   + +FII
Sbjct: 565  IFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAK-KTVFII 623

Query: 218  GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            GATNRPD++DSALLRPGR D+L+YI +  E S R  I KA  RK  + ++V + ++A++ 
Sbjct: 624  GATNRPDIIDSALLRPGRLDQLIYIPLPDEDS-RLNIFKACLRKSPVAKDVDVTALAKY- 681

Query: 398  PPNFTGADIYALCADAWFHAAKRSV-KTLEADPSRN-NDAGAEEVIVETE 541
               F+GADI  +C  A  +A + ++ K +E +  R+ N    EE +V+ E
Sbjct: 682  TQGFSGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDE 731



 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 61/168 (36%), Positives = 93/168 (55%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           FE+A    P +IF DE+DS+AP R  +  +G V  R+VSQLL  +DGL   +  + ++GA
Sbjct: 293 FEEAEKNAPSIIFIDEIDSIAPKREKT--NGEVERRIVSQLLTLMDGLKSRAH-VIVMGA 349

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRP+ +D AL R GRFD+ + IGV  E   R  +L+  T+  KL E+V L  I++    
Sbjct: 350 TNRPNSIDPALRRFGRFDREIDIGVPDEIG-RLEVLRIHTKNMKLAEDVDLERISKD-TH 407

Query: 404 NFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
            + GAD+ ALC +A     +  +  ++ +    +      + V  E F
Sbjct: 408 GYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHF 455

---

>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
            (p97/CDC48 homolog 2)
          Length = 810

 Score =  134 bits (336), Expect = 2e-31
 Identities = 76/169 (44%), Positives = 115/169 (68%), Gaps = 2/169 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSA-DSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
            +F+KAR+A PCV+FFDELDS+A ARG S  D+GG  DRV++Q+L E+DG++   +++FII
Sbjct: 567  VFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAK-KNVFII 625

Query: 218  GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            GATNRPD++D A+LRPGR D+L+YI +  EAS R +I KA  RK  L  ++ L  +A++ 
Sbjct: 626  GATNRPDIIDPAVLRPGRLDQLIYIPLPDEAS-RLQIFKASLRKTPLSADLDLNFLAKN- 683

Query: 398  PPNFTGADIYALCADAWFHAAKRSV-KTLEADPSRNNDAGAEEVIVETE 541
               F+GAD+  +C  A   A + S+ + +  +  R + +   E ++E E
Sbjct: 684  TVGFSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDE 732



 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 58/168 (34%), Positives = 93/168 (55%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           F +     P ++F DE+D++AP R  +   G V  R+VSQLL  +DGL   +  + +I A
Sbjct: 295 FAECEKNSPAILFIDEIDAIAPKREKA--HGEVEKRIVSQLLTLMDGLKTRAH-VVVIAA 351

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRP+ +D AL R GRFD+ + IG+  +A  R  IL+  T+  KL E+V L  +A  C  
Sbjct: 352 TNRPNSIDGALRRFGRFDREIDIGI-PDAVGRLEILRIHTKNMKLGEDVDLEQVANEC-H 409

Query: 404 NFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
            F GAD+ +LC++A     +  ++ ++ +    +      + V  E+F
Sbjct: 410 GFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENF 457

---

>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  133 bits (335), Expect = 3e-31
 Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSS-ADSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
            IF+KAR A PCV+FFDELDS+A ARG +  D GG  DRV++Q+L E+DG+S   +++FII
Sbjct: 561  IFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFII 619

Query: 218  GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            GATNRPD++D A+LRPGR D+L+YI +  E S R  ILKA  RK  + ++V L  +A+  
Sbjct: 620  GATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLEFLAK-M 677

Query: 398  PPNFTGADIYALCADAWFHAAKRSVKT-LEADPSRNNDAGAEEV 526
               F+GAD+  +C  A   A + S+++ +  +  R  +  A EV
Sbjct: 678  TNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEV 721



 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 60/168 (35%), Positives = 95/168 (56%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           FE+A    P +IF DELD++AP R  +   G V  R+VSQLL  +DGL   +  + ++ A
Sbjct: 289 FEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQLLTLMDGLKQRAH-VIVMAA 345

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRP+ +D AL R GRFD+ + IG+  +A+ R  IL+  T+  KL ++V L  +A     
Sbjct: 346 TNRPNSIDPALRRFGRFDREVDIGI-PDATGRLEILQIHTKNMKLADDVDLEQVANE-TH 403

Query: 404 NFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
              GAD+ ALC++A   A ++ +  ++ +    +      + V  +DF
Sbjct: 404 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDF 451

---

>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  133 bits (335), Expect = 3e-31
 Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSS-ADSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
            IF+KAR A PCV+FFDELDS+A ARG +  D GG  DRV++Q+L E+DG+S   +++FII
Sbjct: 561  IFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFII 619

Query: 218  GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            GATNRPD++D A+LRPGR D+L+YI +  E S R  ILKA  RK  + ++V L  +A+  
Sbjct: 620  GATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLEFLAK-M 677

Query: 398  PPNFTGADIYALCADAWFHAAKRSVKT-LEADPSRNNDAGAEEV 526
               F+GAD+  +C  A   A + S+++ +  +  R  +  A EV
Sbjct: 678  TNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEV 721



 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 60/168 (35%), Positives = 95/168 (56%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           FE+A    P +IF DELD++AP R  +   G V  R+VSQLL  +DGL   +  + ++ A
Sbjct: 289 FEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQLLTLMDGLKQRAH-VIVMAA 345

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRP+ +D AL R GRFD+ + IG+  +A+ R  IL+  T+  KL ++V L  +A     
Sbjct: 346 TNRPNSIDPALRRFGRFDREVDIGI-PDATGRLEILQIHTKNMKLADDVDLEQVANE-TH 403

Query: 404 NFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
              GAD+ ALC++A   A ++ +  ++ +    +      + V  +DF
Sbjct: 404 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDF 451

---

>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  133 bits (335), Expect = 3e-31
 Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSS-ADSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
            IF+KAR A PCV+FFDELDS+A ARG +  D GG  DRV++Q+L E+DG+S   +++FII
Sbjct: 561  IFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFII 619

Query: 218  GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            GATNRPD++D A+LRPGR D+L+YI +  E S R  ILKA  RK  + ++V L  +A+  
Sbjct: 620  GATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLEFLAK-M 677

Query: 398  PPNFTGADIYALCADAWFHAAKRSVKT-LEADPSRNNDAGAEEV 526
               F+GAD+  +C  A   A + S+++ +  +  R  +  A EV
Sbjct: 678  TNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEV 721



 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 60/168 (35%), Positives = 95/168 (56%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           FE+A    P +IF DELD++AP R  +   G V  R+VSQLL  +DGL   +  + ++ A
Sbjct: 289 FEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQLLTLMDGLKQRAH-VIVMAA 345

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRP+ +D AL R GRFD+ + IG+  +A+ R  IL+  T+  KL ++V L  +A     
Sbjct: 346 TNRPNSIDPALRRFGRFDREVDIGI-PDATGRLEILQIHTKNMKLADDVDLEQVANE-TH 403

Query: 404 NFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
              GAD+ ALC++A   A ++ +  ++ +    +      + V  +DF
Sbjct: 404 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDF 451

---

>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  133 bits (335), Expect = 3e-31
 Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSS-ADSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
            IF+KAR A PCV+FFDELDS+A ARG +  D GG  DRV++Q+L E+DG+S   +++FII
Sbjct: 561  IFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFII 619

Query: 218  GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            GATNRPD++D A+LRPGR D+L+YI +  E S R  ILKA  RK  + ++V L  +A+  
Sbjct: 620  GATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLEFLAK-M 677

Query: 398  PPNFTGADIYALCADAWFHAAKRSVKT-LEADPSRNNDAGAEEV 526
               F+GAD+  +C  A   A + S+++ +  +  R  +  A EV
Sbjct: 678  TNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEV 721



 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 60/168 (35%), Positives = 95/168 (56%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           FE+A    P +IF DELD++AP R  +   G V  R+VSQLL  +DGL   +  + ++ A
Sbjct: 289 FEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQLLTLMDGLKQRAH-VIVMAA 345

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRP+ +D AL R GRFD+ + IG+  +A+ R  IL+  T+  KL ++V L  +A     
Sbjct: 346 TNRPNSIDPALRRFGRFDREVDIGI-PDATGRLEILQIHTKNMKLADDVDLEQVANE-TH 403

Query: 404 NFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
              GAD+ ALC++A   A ++ +  ++ +    +      + V  +DF
Sbjct: 404 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDF 451

---

>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score =  133 bits (334), Expect = 4e-31
 Identities = 77/164 (46%), Positives = 111/164 (67%), Gaps = 3/164 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARG--SSADSGGVMDRVVSQLLVEIDGLSDNSQDLFI 214
            IF+KAR + PCV+FFDELDS+A  RG  S  D GG  DRV++QLL E+DG++   + +FI
Sbjct: 565  IFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAK-KTVFI 623

Query: 215  IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
            IGATNRPD++DSALLRPGR D+L+YI +  E S R  I KA  RK  + ++V + ++A++
Sbjct: 624  IGATNRPDIIDSALLRPGRLDQLIYIPLPDEDS-RLNIFKAALRKSPIAKDVDIGALAKY 682

Query: 395  CPPNFTGADIYALCADAWFHAAKRSV-KTLEADPSRNNDAGAEE 523
                F+GADI  +C  A  +A + ++ K +E +  R+ +  A E
Sbjct: 683  -TQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEAME 725



 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 61/168 (36%), Positives = 93/168 (55%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           FE+A    P +IF DE+DS+AP R  +  +G V  R+VSQLL  +DGL   +  + ++GA
Sbjct: 293 FEEAEKNAPSIIFIDEIDSIAPKREKT--NGEVERRIVSQLLTLMDGLKSRAH-VIVMGA 349

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRP+ +D AL R GRFD+ + IGV  E   R  +L+  T+  KL E+V L  I++    
Sbjct: 350 TNRPNSIDPALRRFGRFDREIDIGVPDEIG-RLEVLRIHTKNMKLAEDVDLERISKD-TH 407

Query: 404 NFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
            + GAD+ ALC +A     +  +  ++ +    +      + V  E F
Sbjct: 408 GYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHF 455

---

>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score =  130 bits (328), Expect = 2e-30
 Identities = 77/169 (45%), Positives = 110/169 (65%), Gaps = 1/169 (0%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSS-ADSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
            IF+KAR A PCV+FFDELDS+A ARG +  D GG  DRV++Q+L E+DG+S   +++FII
Sbjct: 562  IFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIK-KNVFII 620

Query: 218  GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            GATNRPD++D A+LRPGR D+L+YI +  E S R  ILKA  RK  + ++V +  +A+  
Sbjct: 621  GATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RMAILKANLRKSPVAKDVDVDFLAK-M 678

Query: 398  PPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETED 544
               F+GAD+  +C  A   A + S++  E    R+       + VE +D
Sbjct: 679  TNGFSGADLTEICQRACKLAIRESIEN-EIRRERDRQTNPSAMEVEEDD 726



 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 59/168 (35%), Positives = 95/168 (56%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           FE+A    P +IF DELD++AP R  +   G V  R+VSQLL  +DGL   +  + ++ A
Sbjct: 290 FEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQLLTLMDGLKQRAH-VIVMAA 346

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRP+ +D AL R GRFD+ + IG+  +++ R  IL+  T+  KL ++V L  +A     
Sbjct: 347 TNRPNSIDPALRRFGRFDREVDIGI-PDSTGRLEILQIHTKNMKLSDDVDLEQVANE-TH 404

Query: 404 NFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
              GAD+ ALC++A   A ++ +  ++ +    +      + V  +DF
Sbjct: 405 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDF 452

---

>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
            (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score =  130 bits (327), Expect = 2e-30
 Identities = 77/170 (45%), Positives = 116/170 (68%), Gaps = 2/170 (1%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSA-DSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
            IF+KAR + PCV+FFDELDS+A  RG+S  D+GG  DRV++QLL E+DG++   + +FII
Sbjct: 566  IFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAK-KTVFII 624

Query: 218  GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            GATNRPD++D ALLRPGR D+L+YI +  E S R +I K+  RK  + ++V L ++A++ 
Sbjct: 625  GATNRPDIIDPALLRPGRLDQLIYIPLPDEES-RYQIFKSCLRKSPVAKDVDLRALAKY- 682

Query: 398  PPNFTGADIYALCADAWFHAAKRSV-KTLEADPSRNNDAGAEEVIVETED 544
               F+GADI  +C  +  +A + ++ K +E +  R   A + E + E E+
Sbjct: 683  TQGFSGADITEICQRSCKYAIRENIEKDIEKERKR---AESPEAMEEDEE 729



 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 58/149 (38%), Positives = 87/149 (58%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           FE+A    P +IF DE+DS+AP R  +   G V  R+VSQLL  +DGL   +  + ++GA
Sbjct: 294 FEEAEKNAPSIIFIDEIDSIAPKREKT--HGEVERRIVSQLLTLMDGLKSRAH-VIVMGA 350

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRP+ +D AL R GRFD+ + IGV  E   R  +L+  T+  KL E+V L  +++    
Sbjct: 351 TNRPNSIDPALRRFGRFDREIDIGVPDEIG-RLEVLRIHTKNMKLAEDVDLERVSKD-TH 408

Query: 404 NFTGADIYALCADAWFHAAKRSVKTLEAD 490
            + GAD+ ALC +A     +  +  ++ D
Sbjct: 409 GYVGADLAALCTEAALQCIREKMDVIDLD 437

---

>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score =  128 bits (322), Expect = 9e-30
 Identities = 75/171 (43%), Positives = 116/171 (67%), Gaps = 4/171 (2%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
            IF+KAR+A PCV+F DELDS+A ARG+SA   G  DRVV+QLL E+DG+ ++ +++F+IG
Sbjct: 582  IFDKARAAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGV-NSKKNVFVIG 640

Query: 221  ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
            ATNRPD +D AL+RPGR D+L+Y+ +  E + R  IL+ Q R   + E+V L ++A+   
Sbjct: 641  ATNRPDQIDPALMRPGRLDQLIYVPLPDEEA-RFSILQTQLRHTPVAEDVDLRAVAK-AT 698

Query: 401  PNFTGADIYALCADAWFHAAKRSVK-TLEADPSRNNDAG---AEEVIVETE 541
              F+GAD+  +       A K ++K ++E D  R N+ G   A++V+++ +
Sbjct: 699  HGFSGADLEFVVQ----RAVKLAIKDSIEEDIKRENETGEAPADDVVMDED 745



 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 55/149 (36%), Positives = 89/149 (59%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           FE+A    P +IF DE+DS+AP R  +  +G V  RVVSQLL  +DG+   S ++ ++ A
Sbjct: 310 FEEAEKNSPAIIFIDEIDSIAPKREKT--NGEVERRVVSQLLTLMDGMKARS-NVVVMAA 366

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRP+ +D AL R GRFD+ + +G+  + + R  IL+  T+  KL ++V L  IA     
Sbjct: 367 TNRPNSIDPALRRFGRFDREVDVGI-PDPTGRLEILRIHTKNMKLADDVDLEQIAAE-TH 424

Query: 404 NFTGADIYALCADAWFHAAKRSVKTLEAD 490
            + G+D+ +LC++A     +  +  ++ D
Sbjct: 425 GYVGSDLASLCSEAAMQQIREKMDMIDLD 453

---

>SAV_SULAC (Q07590) SAV protein|
          Length = 780

 Score =  126 bits (317), Expect = 4e-29
 Identities = 79/161 (49%), Positives = 106/161 (65%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
            IF KAR A P VIFFDE+DS+AP RG S DSG V +R+V+QLL E+DG+   ++ + II 
Sbjct: 572  IFRKARQAAPTVIFFDEIDSIAPIRGLSTDSG-VTERIVNQLLAEMDGIVPLNK-VVIIA 629

Query: 221  ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
            ATNRPD+LD ALLRPGRFD+L+Y+    + + R  ILK  T+   L E+VSL  IA+   
Sbjct: 630  ATNRPDILDPALLRPGRFDRLIYV-PPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKA- 687

Query: 401  PNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEE 523
              +TGAD+ AL  +A  + A RS+ ++    SR+   G  E
Sbjct: 688  EGYTGADLEALVREATIN-AMRSIYSMCDKQSRDECKGNME 727



 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 67/180 (37%), Positives = 102/180 (56%), Gaps = 2/180 (1%)
 Frame = +2

Query: 14  ENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSD 193
           E+++R+   IF++A    P +IF DE+D++AP R     +G V  RVV+QLL  +DG+  
Sbjct: 289 ESEQRIR-EIFKEAEENAPSIIFIDEIDAIAPKREDV--TGEVEKRVVAQLLTLMDGIKG 345

Query: 194 NSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVS 373
             + + +IGATNRPD +D AL RPGRFD+ + I    +   R+ IL+  TR   + ++V 
Sbjct: 346 RGR-VIVIGATNRPDAIDPALRRPGRFDREIEIR-PPDTKGRKDILQVHTRNMPITDDVD 403

Query: 374 LLSIAQHCPPNFTGADIYALCADAWFHAAKRSV--KTLEADPSRNNDAGAEEVIVETEDF 547
           L  +A+     +TGAD+ AL  +A  +A +R V  K L  D         +E+ V   DF
Sbjct: 404 LDKLAE-MTYGYTGADLAALAKEAAIYALRRFVDEKKLNLDQPTIPAEIIKELKVSMNDF 462

---

>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score =  126 bits (316), Expect = 5e-29
 Identities = 79/169 (46%), Positives = 111/169 (65%), Gaps = 1/169 (0%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSS-ADSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
            IF+KAR+A P V+F DELDS+A ARG S  D+GG  DRVV+QLL E+DG++   +++F+I
Sbjct: 572  IFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAK-KNVFVI 630

Query: 218  GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            GATNRPD +D A+LRPGR D+L+Y+ +  E + R  IL AQ RK  L   + L +IA+  
Sbjct: 631  GATNRPDQIDPAILRPGRLDQLIYVPLPDE-NARLSILNAQLRKTPLEPGLELTAIAK-A 688

Query: 398  PPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETED 544
               F+GAD+  +   A  +A K S+     +  R ++A  +EV VE ED
Sbjct: 689  TQGFSGADLLYIVQRAAKYAIKDSI-----EAHRQHEA-EKEVKVEGED 731



 Score = 96.3 bits (238), Expect = 5e-20
 Identities = 58/149 (38%), Positives = 91/149 (61%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           FE+A    P +IF DE+DS+AP R  +  +G V  RVVSQLL  +DG+   S ++ +I A
Sbjct: 300 FEEAEKNAPAIIFIDEIDSIAPKRDKT--NGEVERRVVSQLLTLMDGMKARS-NVVVIAA 356

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRP+ +D AL R GRFD+ + IG+  +A+ R  +L+  T+  KL ++V L ++A     
Sbjct: 357 TNRPNSIDPALRRFGRFDREVDIGI-PDATGRLEVLRIHTKNMKLADDVDLEALAAE-TH 414

Query: 404 NFTGADIYALCADAWFHAAKRSVKTLEAD 490
            + GADI +LC++A     +  +  ++ D
Sbjct: 415 GYVGADIASLCSEAAMQQIREKMDLIDLD 443

---

>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score =  123 bits (309), Expect = 3e-28
 Identities = 68/144 (47%), Positives = 96/144 (66%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           IF KAR + PC+IFFDE+D++AP RG    S  V D+VV+QLL E+DG+ +  +D+ +I 
Sbjct: 537 IFRKARQSAPCIIFFDEIDAIAPKRGRDLSSA-VTDKVVNQLLTELDGMEE-PKDVVVIA 594

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNRPD++D ALLRPGR D+++ + V  E + R  I K  TR   L E+V+L  +A+   
Sbjct: 595 ATNRPDIIDPALLRPGRLDRVILVPVPDEKA-RLDIFKIHTRSMNLAEDVNLEELAKK-T 652

Query: 401 PNFTGADIYALCADAWFHAAKRSV 472
             +TGADI ALC +A   A + S+
Sbjct: 653 EGYTGADIEALCREAAMLAVRESI 676



 Score =  107 bits (266), Expect = 3e-23
 Identities = 70/178 (39%), Positives = 102/178 (57%)
 Frame = +2

Query: 14  ENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSD 193
           EN R+    IFE+A    P +IF DE+D++AP R  +  +G V  R+V+QLL  +DGL  
Sbjct: 259 ENLRK----IFEEAEENAPSIIFIDEIDAIAPKRDEA--TGEVERRLVAQLLTLMDGLKG 312

Query: 194 NSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVS 373
             Q + +IGATNRP+ LD AL RPGRFD+ + IGV  +   R+ IL+  TR   L E+V 
Sbjct: 313 RGQ-VVVIGATNRPNALDPALRRPGRFDREIVIGV-PDREGRKEILQIHTRNMPLAEDVD 370

Query: 374 LLSIAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
           L  +A      F GAD+ ALC +A   A +R + +++ +         + + V  +DF
Sbjct: 371 LDYLAD-VTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDF 427

---

>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase|
          Length = 1229

 Score =  121 bits (303), Expect = 1e-27
 Identities = 68/147 (46%), Positives = 97/147 (65%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
            +F+KAR+A PC+IFFDE+DSLA  R S+ ++    DRV++Q+L EIDG+++  + +FII 
Sbjct: 1019 LFDKARAASPCIIFFDEIDSLAKERNSNTNNDA-SDRVINQILTEIDGINEK-KTIFIIA 1076

Query: 221  ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
            ATNRPD+LD AL RPGR DKL+YI +  +   R  I KA  +   L+E+V +  +A+   
Sbjct: 1077 ATNRPDILDKALTRPGRLDKLIYISL-PDLKSRYSIFKAILKNTPLNEDVDIHDMAKR-T 1134

Query: 401  PNFTGADIYALCADAWFHAAKRSVKTL 481
              F+GADI  LC  A   A K ++  L
Sbjct: 1135 EGFSGADITNLCQSAVNEAIKETIHLL 1161



 Score =  103 bits (256), Expect = 4e-22
 Identities = 65/163 (39%), Positives = 97/163 (59%)
 Frame = +2

Query: 2    RHEVENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEID 181
            +H  E+++++   IF+KA    PC+IF DE+DS+A  R  S +   +  RVVSQLL  +D
Sbjct: 600  KHIGESEQKLR-KIFKKASEKTPCIIFIDEIDSIANKRSKSNNE--LEKRVVSQLLTLMD 656

Query: 182  GLSDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLH 361
            GL  N+ ++ ++ ATNRP+ +D AL R GRFD+ + I V  E   R  IL  +T+K KL 
Sbjct: 657  GLKKNN-NVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQG-RYEILLTKTKKMKLD 714

Query: 362  ENVSLLSIAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEAD 490
             +V+L  IA+ C   + GAD+  LC +A     K  +  L+ D
Sbjct: 715  PDVNLRKIAKEC-HGYVGADLAQLCFEAAIQCIKEHIHFLDLD 756

---

>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1157

 Score =  117 bits (292), Expect = 3e-26
 Identities = 63/139 (45%), Positives = 97/139 (69%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
            +FE+A++A+PC++FFDE DS+AP RG   DS GV DRVV+Q+L ++DG ++    ++++ 
Sbjct: 884  LFERAQAAKPCILFFDEFDSIAPKRGH--DSTGVTDRVVNQMLTQMDG-AEGLDGVYVLA 940

Query: 221  ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
            AT+RPDL+DSALLRPGR DK +   +  +   R  IL++ TR   + ++V+L S+A  C 
Sbjct: 941  ATSRPDLIDSALLRPGRLDKSVICDM-PDFDDRLDILQSVTRNMNVSKSVNLSSVAGEC- 998

Query: 401  PNFTGADIYALCADAWFHA 457
              F+GAD+ AL  +A+  A
Sbjct: 999  SGFSGADLQALAYNAYLKA 1017

---

>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1043

 Score =  116 bits (291), Expect = 4e-26
 Identities = 68/151 (45%), Positives = 97/151 (64%), Gaps = 9/151 (5%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
            +FE+A+S +PC++FFDE DS+AP RG   DS GV DRVV+QLL ++DG ++    ++I+ 
Sbjct: 782  LFERAQSVKPCILFFDEFDSIAPKRGH--DSTGVTDRVVNQLLTQMDG-AEGLDGVYILA 838

Query: 221  ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKA---------QTRKYKLHENVS 373
            AT+RPDL+DSALLRPGR DK +   + TE S R  IL+A           +K+ L +N  
Sbjct: 839  ATSRPDLIDSALLRPGRLDKSVICNIPTE-SERLDILQAIVNSKDKDTGQKKFALEKNAD 897

Query: 374  LLSIAQHCPPNFTGADIYALCADAWFHAAKR 466
            L  IA+     F+GAD+  LC +A+  +  R
Sbjct: 898  LKLIAEK-TAGFSGADLQGLCYNAYLKSVHR 927

---

>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score =  116 bits (290), Expect = 5e-26
 Identities = 67/145 (46%), Positives = 93/145 (64%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           +F KAR   PCVIFFDE+DSLAP RG   DS  V +RVVSQLL E+DGL +  +D+ +I 
Sbjct: 540 MFRKARQVAPCVIFFDEIDSLAPRRGGIGDS-HVTERVVSQLLTELDGL-EELKDVVVIA 597

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNRPD++D ALLRPGR ++ +YI    +   R  I K   R   L ++V++  +A+   
Sbjct: 598 ATNRPDMIDPALLRPGRLERHIYI-PPPDKKARVEIFKIHLRGKPLADDVNIEELAEK-T 655

Query: 401 PNFTGADIYALCADAWFHAAKRSVK 475
             ++GADI A+C +A   A +  +K
Sbjct: 656 EGYSGADIEAVCREAGMLAIRELIK 680



 Score =  115 bits (289), Expect = 6e-26
 Identities = 74/178 (41%), Positives = 105/178 (58%)
 Frame = +2

Query: 14  ENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSD 193
           E+++R+   IFE+A+   P +IF DE+DS+AP R     +G V  RVV+QLL  +DGL  
Sbjct: 259 ESEQRLR-EIFEEAKENAPSIIFIDEIDSIAPKREEV--TGEVERRVVAQLLALMDGLEA 315

Query: 194 NSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVS 373
              D+ +I ATNRPD +D AL RPGRFD+ + IGV  +   R+ IL+  TRK  L E+V 
Sbjct: 316 RG-DVIVIAATNRPDAIDPALRRPGRFDREIEIGV-PDKEGRKEILEIHTRKMPLAEDVD 373

Query: 374 LLSIAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
           L  +A+     F GAD+ ALC +A  HA +R +  ++ +         E + V  EDF
Sbjct: 374 LEELAE-LTNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVIENLKVTREDF 430

---

>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like|
            protein) (NVLp)
          Length = 855

 Score =  115 bits (289), Expect = 6e-26
 Identities = 75/183 (40%), Positives = 108/183 (59%), Gaps = 4/183 (2%)
 Frame = +2

Query: 11   VENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLS 190
            V    R    +F++A+++ PCVIFFDE+D+L P R        V  RVV+QLL E+DGL 
Sbjct: 655  VGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGL- 711

Query: 191  DNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTR---KYKLH 361
            +  Q +FI+ ATNRPD++D A+LRPGR DK L++G+   A  R  ILK  T+   K  L 
Sbjct: 712  ETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RVAILKTITKNGTKPPLD 770

Query: 362  ENVSLLSIAQHCPPN-FTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVET 538
            E+V+L +IA     N +TGAD+ AL  +A   A ++ +       ++ N  GA E+ V  
Sbjct: 771  EDVNLETIANDLRCNCYTGADLTALVREASLCALRQEI------TAQKNGVGAGELKVSH 824

Query: 539  EDF 547
            + F
Sbjct: 825  KHF 827



 Score =  104 bits (259), Expect = 2e-22
 Identities = 62/155 (40%), Positives = 93/155 (60%), Gaps = 2/155 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQD--LFI 214
           +F++A S  PC++F DE+D++ P R     S  +  R+V+QLL  +D L++ +    + +
Sbjct: 348 LFDQAVSNAPCIVFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLV 405

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
           IGATNRPD LD AL R GRFD+ + +G+  EA+ RERIL+   RK +L E  +   +A H
Sbjct: 406 IGATNRPDSLDPALRRAGRFDREVCLGIPDEAA-RERILQTLCRKLRLPETFNFCHLA-H 463

Query: 395 CPPNFTGADIYALCADAWFHAAKRSVKTLEADPSR 499
             P F GAD+ ALC +A   A  R +   +A   +
Sbjct: 464 LTPGFVGADLMALCREAAMCAVNRVLMKQQAQQKK 498

---

>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score =  115 bits (287), Expect = 1e-25
 Identities = 64/143 (44%), Positives = 93/143 (65%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           IF+KA+   P ++F DE+DS+AP RG+++DSG V +R+V+QLL  +DG+ +    + +IG
Sbjct: 552 IFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSG-VTERIVNQLLTSLDGI-EVMNGVVVIG 609

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNRPD++D ALLR GRFDKL+YI    +   R  ILK  T+   L  +V L  IAQ   
Sbjct: 610 ATNRPDIMDPALLRAGRFDKLIYI-PPPDKEARLSILKVHTKNMPLAPDVDLNDIAQR-T 667

Query: 401 PNFTGADIYALCADAWFHAAKRS 469
             + GAD+  LC +A  +A + +
Sbjct: 668 EGYVGADLENLCREAGMNAYREN 690



 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 64/173 (36%), Positives = 92/173 (53%), Gaps = 4/173 (2%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           IF KA    P +IF DE+DS+AP R      G V  RVV+QLL  +DG+ +    + +IG
Sbjct: 275 IFSKAEETAPSIIFIDEIDSIAPKREEV--QGEVERRVVAQLLTLMDGMKERGH-VIVIG 331

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKL----HENVSLLSIA 388
           ATNR D +D AL RPGRFD+ + IGV  + + R+ IL   TR   L     E    L   
Sbjct: 332 ATNRIDAIDPALRRPGRFDREIEIGV-PDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEM 390

Query: 389 QHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
                 F GAD+ AL  ++  +A +R +  ++ D     +   E+++V  +DF
Sbjct: 391 ADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTEI-LEKMVVTEDDF 442

---

>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)|
          Length = 820

 Score =  114 bits (284), Expect = 2e-25
 Identities = 66/169 (39%), Positives = 104/169 (61%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
            +F++AR+  PCVIFFDE+D+L  +RG   +   V++R+++Q LVE+DG     +++++IG
Sbjct: 613  LFQRARTCAPCVIFFDEVDALTTSRGK--EGAWVVERLLNQFLVELDG--GERRNVYVIG 668

Query: 221  ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
            ATNRPD++D A LRPGRF  LLY+ +   A  R  ILKA  RK  +  +V L  IA++  
Sbjct: 669  ATNRPDVVDPAFLRPGRFGNLLYVPL-PNADERASILKAIARKKPIDPSVDLDGIAKNNC 727

Query: 401  PNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
              F+GAD+  L   A F A +  + + E+  S ++     +  ++T  F
Sbjct: 728  EGFSGADLAHLVQKATFQAVEEMIGSSES--SEDDVTDITQCTIKTRHF 774



 Score = 68.9 bits (167), Expect = 9e-12
 Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSD----NSQD- 205
           +F KA    P ++F DE+D++   R +      +  R+V+QLL  +DG  +    N+ D 
Sbjct: 318 LFSKAYRTAPSIVFIDEIDAIGSKRENQQRE--MEKRIVTQLLTCMDGPGNKGDKNAPDS 375

Query: 206 ----LFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVS 373
               + +IGATNRPD LD AL R GRF+  + +    E + R  IL    +K +L     
Sbjct: 376 SAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDA-RAEILSVVAQKLRLEGPFD 434

Query: 374 LLSIAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNND 508
              IA+   P F GAD+ ++   A   A KR + + +++ S + +
Sbjct: 435 KKRIAR-LTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDGE 478

---

>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score =  110 bits (276), Expect = 2e-24
 Identities = 61/151 (40%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FEKA+S  PC++F DE+D++   RG+    G    ++ ++QLL E+DG S NS  + ++
Sbjct: 334 LFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNS-GVIVL 392

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LDSALLRPGRFD+ + +    + + R +ILK  +R   + ++V    +A+  
Sbjct: 393 AATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVQILKVHSRGKAIGKDVDYEKVARR- 450

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTLEAD 490
            P FTGAD+  L  +A   AA+R +K +  D
Sbjct: 451 TPGFTGADLQNLMNEAAILAARRELKEISKD 481

---

>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score =  110 bits (275), Expect = 3e-24
 Identities = 61/151 (40%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FEKA+S  PC++F DE+D++   RG+    G    ++ ++QLL E+DG S NS  + ++
Sbjct: 346 LFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNS-GVIVL 404

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LDSALLRPGRFD+ + +    + + R +IL+  +R   L ++V    +A+  
Sbjct: 405 AATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVKILQVHSRGKALGKDVDFDKVARR- 462

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTLEAD 490
            P FTGAD+  L  +A   AA+R +K +  D
Sbjct: 463 TPGFTGADLQNLMNEAAILAARRELKEISKD 493

---

>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score =  110 bits (274), Expect = 3e-24
 Identities = 76/180 (42%), Positives = 102/180 (56%)
 Frame = +2

Query: 8   EVENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL 187
           E E Q R    IFE A+   P +IF DELDS+AP R     +G V  RVV+QLL  +DGL
Sbjct: 266 ESEQQLR---EIFEDAKDDSPSIIFIDELDSIAPKREDV--TGEVERRVVAQLLTMMDGL 320

Query: 188 SDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHEN 367
               Q + +I ATNR D +D AL RPGRFD+ + IGV  E   RE ILK  TR   L ++
Sbjct: 321 EGRGQ-VIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIG-REEILKIHTRGMPLSDD 378

Query: 368 VSLLSIAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
           V+L ++A      F GADI +L  +A   A +R +  ++ D      +  + +IV+ EDF
Sbjct: 379 VNLSTLADD-THGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLIDRMIVKREDF 437



 Score =  108 bits (271), Expect = 8e-24
 Identities = 62/140 (44%), Positives = 89/140 (63%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           F KAR   P VIFFDELDSLAP RG +  +  V +RVV+QLL E+DGL +  +++ +I A
Sbjct: 548 FRKARQVAPTVIFFDELDSLAPGRGQTGGNN-VSERVVNQLLTELDGLEE-MEEVMVIAA 605

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TNRPD++D AL+R GRFD+L+ +G       RE+ILK  T+   L  +VSL  +A+    
Sbjct: 606 TNRPDIIDPALIRSGRFDRLVQVG-QPGIEGREQILKIHTQDTPLAADVSLRELAERA-D 663

Query: 404 NFTGADIYALCADAWFHAAK 463
            + G+D+  +  +A   A +
Sbjct: 664 GYVGSDLANIAREAAIEALR 683

---

>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score =  109 bits (273), Expect = 4e-24
 Identities = 61/151 (40%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FEKA+S  PC++F DE+D++   RG+    G    ++ ++QLL E+DG S NS  + ++
Sbjct: 337 LFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNS-GVIVL 395

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LDSALLRPGRFD+ + +    + + R +IL+  +R   L ++V    IA+  
Sbjct: 396 AATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRIKILQVHSRGKALTKDVDFEKIARR- 453

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTLEAD 490
            P +TGAD+  L  +A   AA+R +K +  D
Sbjct: 454 TPGYTGADLQNLMNEAAILAARRELKEISKD 484

---

>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score =  109 bits (272), Expect = 6e-24
 Identities = 61/151 (40%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FEKA+S  PC++F DE+D++   RG+    G    ++ ++QLL E+DG S NS  + ++
Sbjct: 337 LFEKAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNS-GVIVL 395

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LDSALLRPGRFD+ + +    + + R +IL+  +R   L ++V    IA+  
Sbjct: 396 AATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVKILQVHSRGKALAKDVDFDKIARR- 453

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTLEAD 490
            P FTG D+  L  +A   AA+R +K +  D
Sbjct: 454 TPGFTGVDLQNLMNEAAILAARRDLKEISKD 484

---

>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score =  108 bits (271), Expect = 8e-24
 Identities = 61/151 (40%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE A+S  PC++F DE+D++   RG+    G    ++ ++QLL E+DG S NS  + ++
Sbjct: 314 LFENAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNS-GVIVL 372

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LDSALLRPG+FD+ + +    + + R RIL+  +R   L ++V    IA+  
Sbjct: 373 AATNRPDVLDSALLRPGKFDRQVTVD-RPDVAGRVRILQVHSRGKALAKDVDFDKIARR- 430

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTLEAD 490
            P FTGAD+  L  +A   AA+R +K +  D
Sbjct: 431 TPGFTGADLQNLMNEAAILAARRDLKEISKD 461

---

>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome|
            biogenesis disorder protein 1)
          Length = 1283

 Score =  108 bits (270), Expect = 1e-23
 Identities = 62/139 (44%), Positives = 91/139 (65%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
            IF +A++A+PC++FFDE +S+AP RG   D+ GV DRVV+QLL ++DG+ +  Q ++++ 
Sbjct: 925  IFIRAQAAKPCILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGV-EGLQGVYVLA 981

Query: 221  ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
            AT+RPDL+D ALLRPGR DK +Y     + S R  IL   +    L ++V L  +A    
Sbjct: 982  ATSRPDLIDPALLRPGRLDKCVYCPPPDQVS-RLEILNVLSDSLPLADDVDLQHVAS-VT 1039

Query: 401  PNFTGADIYALCADAWFHA 457
             +FTGAD+ AL  +A   A
Sbjct: 1040 DSFTGADLKALLYNAQLEA 1058

---

>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score =  108 bits (270), Expect = 1e-23
 Identities = 64/144 (44%), Positives = 90/144 (62%), Gaps = 2/144 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDR--VVSQLLVEIDGLSDNSQDLFI 214
           +FE A+   PC+IF DE+D++  ARG+    GG  +R   ++QLLVE+DG  D S  + +
Sbjct: 239 LFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGF-DTSDGIIV 297

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
           I ATNRPD+LD ALLRPGRFD+ ++I    +   R  ILK   R  KL ++V L  +A+ 
Sbjct: 298 IAATNRPDILDPALLRPGRFDRQIFI-PKPDVRGRYEILKVHARNKKLAKDVDLEFVAR- 355

Query: 395 CPPNFTGADIYALCADAWFHAAKR 466
             P FTGAD+  L  +A   AA++
Sbjct: 356 ATPGFTGADLENLLNEAALLAARK 379

---

>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7|
          Length = 837

 Score =  108 bits (270), Expect = 1e-23
 Identities = 78/196 (39%), Positives = 110/196 (56%), Gaps = 17/196 (8%)
 Frame = +2

Query: 11   VENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLS 190
            V    R    +F +AR++ PCVIFFDELD+L P R +S        RVV+ LL E+DGL+
Sbjct: 608  VGESERSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESS--SRVVNTLLTELDGLN 665

Query: 191  DNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGV-NTEASYRERILKAQTRKY--KLH 361
            D  + +F+IGATNRPD++D A+LRPGR DK L+I + NTE   +  I+K  T+ +   L 
Sbjct: 666  DR-RGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEE--KLDIIKTLTKSHGTPLS 722

Query: 362  ENVSLLSIAQH--CPPNFTGADIYALCADAWFHAAKRS-VKTLEADPSRNND-------- 508
             +V    I ++  C  NF+GAD+ AL  ++   A KR   ++ E     +ND        
Sbjct: 723  SDVDFEEIIRNEKC-NNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDL 781

Query: 509  ---AGAEEVIVETEDF 547
                  EE+IV   DF
Sbjct: 782  SVGVSGEEIIVTMSDF 797



 Score =  100 bits (250), Expect = 2e-21
 Identities = 63/171 (36%), Positives = 98/171 (57%), Gaps = 6/171 (3%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLS---DNSQDLF 211
           +F++ARS  PC++FFDE+D++ P R   A    +  R+V+QLL  +D L+    N + + 
Sbjct: 290 LFDEARSLAPCLVFFDEIDAITPKRDGGAQRE-MERRIVAQLLTSMDELTMEKTNGKPVI 348

Query: 212 IIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQ 391
           IIGATNRPD LD+AL R GRFD+ + + V  E S R  ILK  +   K+   +    +A+
Sbjct: 349 IIGATNRPDSLDAALRRAGRFDREICLNVPNEVS-RLHILKKMSDNLKIDGAIDFAKLAK 407

Query: 392 HCPPNFTGADIYALCADAWFHAAKRSVKT---LEADPSRNNDAGAEEVIVE 535
              P F GAD+ AL   A   A KR  +T   +++ P+   D+  + + ++
Sbjct: 408 -LTPGFVGADLKALVTAAGTCAIKRIFQTYANIKSTPTTATDSSEDNMEID 457

---

>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  108 bits (269), Expect = 1e-23
 Identities = 67/164 (40%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE A+   PC+IF DE+D++   RG+    G    ++ ++QLLVE+DG S N + + II
Sbjct: 245 LFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSAN-EGIIII 303

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNR D+LD ALLRPGRFD+ + +    +   RE +LK   R   L E V+L SIA   
Sbjct: 304 AATNRADILDPALLRPGRFDRQITVD-RPDVIGREAVLKVHARNKPLDETVNLKSIAMR- 361

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVI 529
            P F+GAD+  L  +A   AA+++ K ++A   R+ D   + VI
Sbjct: 362 TPGFSGADLENLLNEAALVAARQNKKKIDA---RDIDEATDRVI 402

---

>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like|
           protein) (NVLp)
          Length = 856

 Score =  107 bits (268), Expect = 2e-23
 Identities = 65/156 (41%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQD--LFI 214
           +FE+A S  PC+IF DE+D++ P R     S  +  R+V+QLL  +D L++ +    + +
Sbjct: 349 LFEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLV 406

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
           IGATNRPD LD AL R GRFD+ + +G+  EAS RERIL+   RK +L +      +A H
Sbjct: 407 IGATNRPDSLDPALRRAGRFDREICLGIPDEAS-RERILQTLCRKLRLPQAFDFCHLA-H 464

Query: 395 CPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRN 502
             P F GAD+ ALC +A   A  R +  L+    +N
Sbjct: 465 LTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKN 500



 Score =  105 bits (262), Expect = 8e-23
 Identities = 67/158 (42%), Positives = 97/158 (61%), Gaps = 4/158 (2%)
 Frame = +2

Query: 11   VENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLS 190
            V    R    +F++A+++ PCVIFFDE+D+L P R        V  RVV+QLL E+DGL 
Sbjct: 656  VGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGL- 712

Query: 191  DNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTR---KYKLH 361
            +  Q +FI+ ATNRPD++D A+LRPGR DK L++G+   A  R  ILK  T+   K  L 
Sbjct: 713  EARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RLAILKTITKNGTKPPLD 771

Query: 362  ENVSLLSIAQHCPPN-FTGADIYALCADAWFHAAKRSV 472
             +V+L +IA     + +TGAD+ AL  +A   A ++ +
Sbjct: 772  ADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEM 809

---

>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  105 bits (263), Expect = 6e-23
 Identities = 62/158 (39%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE+A+ A PC+IF DE+D++   RG+    G    ++ ++Q+LVE+DG   N + + +I
Sbjct: 236 MFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGN-EGIIVI 294

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD ALLRPGRFD+ + +G+  +   RE+ILK   R+  L  ++    IA+  
Sbjct: 295 AATNRPDVLDPALLRPGRFDRQVVVGL-PDVRGREQILKVHMRRVPLAPDIDAAIIARG- 352

Query: 398 PPNFTGADIYALCADAWFHAA---KRSVKTLEADPSRN 502
            P F+GAD+  L  +A   AA   KR V  +E + +++
Sbjct: 353 TPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKD 390

---

>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  105 bits (263), Expect = 6e-23
 Identities = 62/158 (39%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE+A+ A PC+IF DE+D++   RG+    G    ++ ++Q+LVE+DG   N + + +I
Sbjct: 236 MFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGN-EGIIVI 294

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD ALLRPGRFD+ + +G+  +   RE+ILK   R+  L  ++    IA+  
Sbjct: 295 AATNRPDVLDPALLRPGRFDRQVVVGL-PDVRGREQILKVHMRRVPLATDIDAAIIARG- 352

Query: 398 PPNFTGADIYALCADAWFHAA---KRSVKTLEADPSRN 502
            P F+GAD+  L  +A   AA   KR V  +E + +++
Sbjct: 353 TPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKD 390

---

>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  105 bits (263), Expect = 6e-23
 Identities = 62/158 (39%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE+A+ A PC+IF DE+D++   RG+    G    ++ ++Q+LVE+DG   N + + +I
Sbjct: 236 MFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGN-EGIIVI 294

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD ALLRPGRFD+ + +G+  +   RE+ILK   R+  L  ++    IA+  
Sbjct: 295 AATNRPDVLDPALLRPGRFDRQVVVGL-PDVRGREQILKVHMRRVPLATDIDAAIIARG- 352

Query: 398 PPNFTGADIYALCADAWFHAA---KRSVKTLEADPSRN 502
            P F+GAD+  L  +A   AA   KR V  +E + +++
Sbjct: 353 TPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKD 390

---

>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  105 bits (263), Expect = 6e-23
 Identities = 62/158 (39%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE+A+ A PC+IF DE+D++   RG+    G    ++ ++Q+LVE+DG   N + + +I
Sbjct: 236 MFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGN-EGIIVI 294

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD ALLRPGRFD+ + +G+  +   RE+ILK   R+  L  ++    IA+  
Sbjct: 295 AATNRPDVLDPALLRPGRFDRQVVVGL-PDVRGREQILKVHMRRVPLAPDIDAAIIARG- 352

Query: 398 PPNFTGADIYALCADAWFHAA---KRSVKTLEADPSRN 502
            P F+GAD+  L  +A   AA   KR V  +E + +++
Sbjct: 353 TPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKD 390

---

>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  105 bits (263), Expect = 6e-23
 Identities = 62/158 (39%), Positives = 98/158 (62%), Gaps = 4/158 (2%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE+A+ A PC+IF DE+D++   RG+    G    ++ ++Q+LVE+DG   N + + +I
Sbjct: 236 MFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGN-EGIIVI 294

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD ALLRPGRFD+ + +G+  +   RE+ILK   R+  L  ++    IA+  
Sbjct: 295 AATNRPDVLDPALLRPGRFDRQVVVGL-PDVRGREQILKVHMRRVPLAPDIDAAIIARG- 352

Query: 398 PPNFTGADIYALCADAWFHAA---KRSVKTLEADPSRN 502
            P F+GAD+  L  +A   AA   KR V  +E + +++
Sbjct: 353 TPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKD 390

---

>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score =  105 bits (263), Expect = 6e-23
 Identities = 61/158 (38%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE+A+   PC+IF DE+D++   RG+    G    ++ ++Q+LVE+DG S N   + +I
Sbjct: 235 MFEQAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGND-GVIVI 293

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD AL RPGRFD+ + +G+  +   RE+ILK   RK  + ++V  +++A+  
Sbjct: 294 AATNRPDVLDPALTRPGRFDRQVVVGL-PDVKGREQILKVHMRKVSVAQDVDAMTLARG- 351

Query: 398 PPNFTGADIYALCADAWFHAA---KRSVKTLEADPSRN 502
            P ++GAD+  L  +A   AA   KR+V  LE + +++
Sbjct: 352 TPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKD 389

---

>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score =  105 bits (263), Expect = 6e-23
 Identities = 67/174 (38%), Positives = 105/174 (60%), Gaps = 5/174 (2%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE +R + PC+IF DE+D++   RG+    G    ++ ++Q+LVE+DG  D ++ + +I
Sbjct: 236 MFEHSRKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGF-DGNEGIILI 294

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD ALLRPGRFD+ + + +  +   RE+ILK   RK  L ++V  + IA+  
Sbjct: 295 AATNRPDVLDPALLRPGRFDRQVIVAL-PDIRGREQILKVHMRKVPLSKDVDPMIIARG- 352

Query: 398 PPNFTGADIYALCADAWFHAA---KRSVKTLEADPSRNN-DAGAEEVIVETEDF 547
            P F+GAD+  L  +A   AA   KR V  LE + +++    G+E   +   DF
Sbjct: 353 TPGFSGADLANLVNEAALFAARLDKRVVSMLEFERAKDKMMMGSERRSMVMSDF 406

---

>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score =  104 bits (259), Expect = 2e-22
 Identities = 59/142 (41%), Positives = 91/142 (64%), Gaps = 1/142 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE AR + PC+IF DE+D++   RG+    G    ++ ++Q+LVE+DG  D ++ + +I
Sbjct: 236 MFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGF-DGNEGVILI 294

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD ALLRPGRFD+ + + +  +   R++ILK   RK  L E+V  + IA+  
Sbjct: 295 AATNRPDVLDPALLRPGRFDRQVIVAL-PDVRGRKQILKVHMRKVPLSEDVDPMIIARG- 352

Query: 398 PPNFTGADIYALCADAWFHAAK 463
            P F+GAD+  L  +A   AA+
Sbjct: 353 TPGFSGADLANLVNEAALFAAR 374

---

>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score =  104 bits (259), Expect = 2e-22
 Identities = 60/151 (39%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE+A++  PC++F DE+D++   RG+    G    ++ ++QLL E+DG   N+  + I+
Sbjct: 245 LFEQAKANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNT-GIIIV 303

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LDSAL+RPGRFD+ + +     A  RE IL    R   L ++V L  IA+  
Sbjct: 304 AATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRRE-ILNVHARGKTLSQDVDLDKIARR- 361

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTLEAD 490
            P FTGAD+  L  +A   AA+R++  +  D
Sbjct: 362 TPGFTGADLSNLLNEAAILAARRNLTEISMD 392

---

>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score =  103 bits (257), Expect = 3e-22
 Identities = 59/142 (41%), Positives = 89/142 (62%), Gaps = 1/142 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE A+   PC+IF DE+D++   RG+    G    ++ ++QLLVE+DG S N + + II
Sbjct: 250 LFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSAN-EGIIII 308

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNR D+LD ALLRPGRFD+ + +    + + RE +LK   R   L+++V+L +IA   
Sbjct: 309 AATNRADILDPALLRPGRFDRQIQVN-RPDVNGREEVLKVHARNKPLNDDVNLKTIATR- 366

Query: 398 PPNFTGADIYALCADAWFHAAK 463
            P F+GAD+  L  +A   AA+
Sbjct: 367 TPGFSGADLENLLNEAALVAAR 388

---

>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score =  103 bits (257), Expect = 3e-22
 Identities = 63/154 (40%), Positives = 94/154 (61%), Gaps = 4/154 (2%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F+KA+   PC+IF DE+D++   RG+    G    ++ ++QLL E+DG   N+  + II
Sbjct: 256 LFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNT-GIIII 314

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LDSAL+RPGRFD+ + +    + S R+ IL+   R  KL   VS+ SIA+  
Sbjct: 315 AATNRPDVLDSALMRPGRFDRQVMVDA-PDYSGRKEILEVHARNKKLAPEVSIDSIARR- 372

Query: 398 PPNFTGADIYALCADAWFHAAKR---SVKTLEAD 490
            P F+GAD+  L  +A    A+R   ++  LE D
Sbjct: 373 TPGFSGADLANLLNEAAILTARRRKSAITLLEID 406

---

>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score =  103 bits (256), Expect = 4e-22
 Identities = 59/143 (41%), Positives = 86/143 (60%), Gaps = 1/143 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F+KA+   PC++F DE+D++   RG     G    ++ ++QLL E+DG   NS  + +I
Sbjct: 295 LFKKAKENAPCLVFIDEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNS-GIIVI 353

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD ALLRPGRFD+ + +    +   RE IL    +  KLHE V L +IA+  
Sbjct: 354 AATNRPDVLDLALLRPGRFDRQVTVDY-PDVQGRELILAIHAQNKKLHEEVQLAAIARR- 411

Query: 398 PPNFTGADIYALCADAWFHAAKR 466
            P FTGAD+  +  +A    A+R
Sbjct: 412 TPGFTGADLANVLNEAAIFTARR 434

---

>TBP7_YEAST (P40340) TAT-binding homolog 7|
          Length = 1379

 Score =  103 bits (256), Expect = 4e-22
 Identities = 66/183 (36%), Positives = 101/183 (55%), Gaps = 3/183 (1%)
 Frame = +2

Query: 8    EVENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL 187
            E E Q R+   +FE+A+  +P +IFFDE+D LAP R S  +   +   +VS LL  +DG+
Sbjct: 495  EAERQLRL---LFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQ--IHASIVSTLLALMDGM 549

Query: 188  SDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHEN 367
             DN   + +IGATNRPD +D AL RPGRFD+  Y  +  +   R +IL+ QTRK+    +
Sbjct: 550  -DNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPL-PDVKARFKILQIQTRKWSSPLS 607

Query: 368  VSLLSIAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNND---AGAEEVIVET 538
             + +         + GAD+ +LC +A   + +RS   +     R+ND       ++ V+ 
Sbjct: 608  TNFIDKLAFLTKGYGGADLRSLCTEAALISIQRSFPQI----YRSNDKLLVDPSKIKVKV 663

Query: 539  EDF 547
             DF
Sbjct: 664  SDF 666

---

>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score =  103 bits (256), Expect = 4e-22
 Identities = 56/144 (38%), Positives = 91/144 (63%), Gaps = 1/144 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE +R   PC+IF DE+D++   RG+    G    ++ ++Q+LVE+DG  D ++ + +I
Sbjct: 236 MFEHSRKVAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGF-DGNEGIILI 294

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD ALLRPGRFD+ +++ +  +   RE+I++   +K  L  NV  + IA+  
Sbjct: 295 AATNRPDVLDPALLRPGRFDRQIFVAL-PDIRGREKIIQVHMKKVPLGNNVDPMIIARG- 352

Query: 398 PPNFTGADIYALCADAWFHAAKRS 469
            P F+GAD+  L  +A   AA+ +
Sbjct: 353 TPGFSGADLANLVNEAALFAARNN 376

---

>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score =  102 bits (255), Expect = 5e-22
 Identities = 61/153 (39%), Positives = 92/153 (60%), Gaps = 3/153 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDR--VVSQLLVEIDGLSDNSQDLFI 214
           +FE+A+   PC++F DELD++  +R S A  GG  +R   ++QLL E+DG S     + +
Sbjct: 258 LFEQAKKQAPCIVFIDELDAIGKSRASGAFMGGNDEREQTLNQLLTEMDGFSAAGATVIV 317

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
           + ATNRP+ LD ALLRPGRFD+ + +    + + R +IL+   +K KL + V L +IA  
Sbjct: 318 LAATNRPETLDPALLRPGRFDRQVLVD-RPDLAGRLKILEIYAKKIKLDKEVELKNIATR 376

Query: 395 CPPNFTGADIYALCADAWFHAAKRSVKTL-EAD 490
             P F GAD+  L  +A   AA+    ++ EAD
Sbjct: 377 -TPGFAGADLANLVNEAALLAARNKQDSVTEAD 408

---

>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score =  102 bits (254), Expect = 7e-22
 Identities = 59/150 (39%), Positives = 89/150 (59%), Gaps = 1/150 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE A+ A P +IF DE+D++   RG     G    ++ ++QLL+E+DG   N + + +I
Sbjct: 271 LFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGN-EGIIVI 329

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNR D+LD ALLRPGRFD+ + +G   +   RE ILK   +   L E+V L  +AQ  
Sbjct: 330 AATNRSDVLDPALLRPGRFDRKVLVG-RPDVKGREAILKVHAKNKPLAEDVDLKLVAQQ- 387

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTLEA 487
            P F GAD+  +  +A   AA+R+   ++A
Sbjct: 388 TPGFVGADLENVLNEAALVAARRNKSIIDA 417

---

>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score =  102 bits (254), Expect = 7e-22
 Identities = 59/150 (39%), Positives = 89/150 (59%), Gaps = 1/150 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE A+ A P +IF DE+D++   RG     G    ++ ++QLL+E+DG   N + + +I
Sbjct: 271 LFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGN-EGIIVI 329

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNR D+LD ALLRPGRFD+ + +G   +   RE ILK   +   L E+V L  +AQ  
Sbjct: 330 AATNRSDVLDPALLRPGRFDRKVLVG-RPDVKGREAILKVHAKNKPLAEDVDLKLVAQQ- 387

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTLEA 487
            P F GAD+  +  +A   AA+R+   ++A
Sbjct: 388 TPGFVGADLENVLNEAALVAARRNKSIIDA 417

---

>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score =  101 bits (252), Expect = 1e-21
 Identities = 55/150 (36%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE A+   P +IF DE+D++   RG+    G    ++ ++QLLVE+DG  D+   + +I
Sbjct: 277 LFENAKKTAPSIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVI 336

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNR D+LD ALLRPGRFD+ + +G   +   RE +LK   +   L  +V L ++A   
Sbjct: 337 AATNRSDVLDPALLRPGRFDRKVLVGA-PDVKGREAVLKVHAKNKPLASDVDLHNVATQ- 394

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTLEA 487
            P + GAD+  +  +A   AA+++ K + A
Sbjct: 395 TPGYVGADLENVLNEAALVAARQNKKEINA 424

---

>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 407

 Score =  101 bits (252), Expect = 1e-21
 Identities = 62/154 (40%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F+ A+   PC+IF DE+D++A  R  S   G   + R + QLL E+DG  D+  D+ II
Sbjct: 233 VFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGF-DSRGDVKII 291

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD A+LRPGRFD+++ I +  E   R  ILK  T K  L + V L  +A+  
Sbjct: 292 AATNRPDILDPAILRPGRFDRIIEISMPDEDG-RLEILKIHTEKMNL-KGVDLREVAK-I 348

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTLEADPSR 499
             N  GAD+ A+C +A   A +   + ++ D  R
Sbjct: 349 AENMVGADLKAVCTEAGMFAIREEREFIKMDDFR 382

---

>AFG2_YEAST (P32794) Protein AFG2|
          Length = 780

 Score =  100 bits (249), Expect = 3e-21
 Identities = 61/146 (41%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
 Frame = +2

Query: 11   VENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLS 190
            V    R    IF KARSA P +IFFDE+D+L+P R  S+ S    + V++ LL EIDG+ 
Sbjct: 591  VGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAA--NHVLTSLLNEIDGVE 648

Query: 191  DNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHEN- 367
            +  + + I+ ATNRPD +D+ALLRPGR D+ +Y+G   + + R  ILK  T+K+   E+ 
Sbjct: 649  E-LKGVVIVAATNRPDEIDAALLRPGRLDRHIYVG-PPDVNARLEILKKCTKKFNTEESG 706

Query: 368  VSLLSIAQHCPPNFTGADIYALCADA 445
            V L  +A      ++GA++  LC +A
Sbjct: 707  VDLHELADR-TEGYSGAEVVLLCQEA 731



 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 3/149 (2%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           IF +AR  +P +IF DE+DS+AP R +  DSG V  RVV+ LL  +DG+    + + +I 
Sbjct: 330 IFNEARKYQPSIIFIDEIDSIAPNRAND-DSGEVESRVVATLLTLMDGMGAAGK-VVVIA 387

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENV---SLLSIAQ 391
           ATNRP+ +D AL RPGRFD+ + IG+  +   R  IL  Q  +     +V     +    
Sbjct: 388 ATNRPNSVDPALRRPGRFDQEVEIGI-PDVDARFDILTKQFSRMSSDRHVLDSEAIKYIA 446

Query: 392 HCPPNFTGADIYALCADAWFHAAKRSVKT 478
                + GAD+ ALC ++     +R + T
Sbjct: 447 SKTHGYVGADLTALCRESVMKTIQRGLGT 475

---

>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score =  100 bits (248), Expect = 4e-21
 Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 1/147 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQ 202
           R+   +F+ A+   P +IF DELD++A  R +S  SG   + R + QLL E+DG  D   
Sbjct: 221 RLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGF-DPRG 279

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           D+ +IGATNR D+LD A+LRPGRFD+++ + + T    R +I K  TRK KL E+V    
Sbjct: 280 DVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEG-RIQIFKIHTRKMKLAEDVDFKE 338

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAK 463
           +A+      +GADI A+C +A   A +
Sbjct: 339 LAR-ITEGASGADIKAICTEAGMFAIR 364

---

>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 430

 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 60/142 (42%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           IF+ A+   P +IF DE+D++A  R  +   G   + R + QLL E+DG  D   D+ II
Sbjct: 255 IFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGF-DARGDVKII 313

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
           GATNRPD+LD A+LRPGRFD+++ +    E   R  ILK  TRK  L E+V+L  IA+  
Sbjct: 314 GATNRPDILDPAILRPGRFDRIIEVPAPDEKG-RLEILKIHTRKMNLAEDVNLEEIAK-M 371

Query: 398 PPNFTGADIYALCADAWFHAAK 463
                GA++ A+C +A  +A +
Sbjct: 372 TEGCVGAELKAICTEAGMNAIR 393

---

>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score = 99.4 bits (246), Expect = 6e-21
 Identities = 56/148 (37%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F+KA+   PC++F DE+D++   RG+    G    ++ ++QLL E+DG   N+  + +I
Sbjct: 238 LFKKAKQNAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNT-GVIVI 296

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNR D+LD+ALLRPGRFD+ + + +  +   R  ILK    + KLH  VSL ++A+  
Sbjct: 297 AATNRVDVLDAALLRPGRFDRQIMVSM-PDVKSRIAILKVHANQKKLHPQVSLEAVARR- 354

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTL 481
              F GAD+  L  +A   A +R +K +
Sbjct: 355 TAGFAGADLANLLNEAAILAVRRGLKQI 382

---

>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2|
          Length = 1040

 Score = 99.4 bits (246), Expect = 6e-21
 Identities = 63/154 (40%), Positives = 92/154 (59%), Gaps = 1/154 (0%)
 Frame = +2

Query: 8   EVENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL 187
           E E Q R+   +F++A   RP +IFFDE+D LAP R S  D   +   +VS LL  +DGL
Sbjct: 163 ESERQLRL---LFDQAYQMRPAIIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGL 217

Query: 188 SDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHE- 364
            D+  ++ +IGATNR D +D AL RPGRFD+     +  + + R+ ILK  TR +     
Sbjct: 218 -DSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSL-PDKNARKEILKIHTRDWNPKPV 275

Query: 365 NVSLLSIAQHCPPNFTGADIYALCADAWFHAAKR 466
           ++ L  +A+HC   + GADI ++CA+A   A +R
Sbjct: 276 DMFLEELAEHC-VGYCGADIKSICAEAALCALRR 308

---

>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)|
          Length = 603

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 58/136 (42%), Positives = 88/136 (64%), Gaps = 2/136 (1%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARG--SSADSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
           F++AR A P +IFFDE D +A  RG  SS++S  V +R++S LL E+DGL + ++ + ++
Sbjct: 372 FQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEE-AKGILVL 430

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRP  +D+AL+RPGRFD +LY+    +   R  IL+  TR   L ++V L  IA+  
Sbjct: 431 AATNRPYAIDAALMRPGRFDLVLYV-PPPDLEARFEILQVHTRNMTLGDDVDLRKIAEE- 488

Query: 398 PPNFTGADIYALCADA 445
              FTGA++  LC ++
Sbjct: 489 TDLFTGAELEGLCRES 504



 Score = 82.4 bits (202), Expect = 8e-16
 Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
 Frame = +2

Query: 53  ARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL--SDNSQDLFIIGAT 226
           A S +P VIF DE+D L P R +  +      R+ SQL   +D    S ++  + ++ +T
Sbjct: 115 AVSDKPSVIFIDEIDVLCPRRDARREQDV---RIASQLFTLMDSNKPSSSAPRVVVVAST 171

Query: 227 NRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPPN 406
           NR D +D AL R GRFD L+ +    E   R +IL+  T+K  L  +V L +IA  C   
Sbjct: 172 NRVDAIDPALRRAGRFDALVEVSTPNEED-RLKILQLYTKKVNLDPSVDLQAIAISC-NG 229

Query: 407 FTGADIYALCADAWFHAAKRSVKTL 481
           + GAD+ ALC +A   A+KRS  +L
Sbjct: 230 YVGADLEALCREATISASKRSSDSL 254

---

>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 54/136 (39%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F+KA    PC++F DE+D++   RG+    G    ++ ++QLL E+DG  +N + + ++
Sbjct: 270 LFKKASENAPCIVFIDEIDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKEN-KGVIVV 328

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
           GATNR D+LD+ALLRPGRFD+ + + +      R  ILK   R   L E+VSL+ +A   
Sbjct: 329 GATNRADILDAALLRPGRFDRQVTVNLPDRLG-RVGILKVHARNKPLGEDVSLVQLANR- 386

Query: 398 PPNFTGADIYALCADA 445
            P F+GAD+  L  +A
Sbjct: 387 TPGFSGADLANLLNEA 402

---

>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 58/149 (38%), Positives = 89/149 (59%), Gaps = 1/149 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE+ +   PC+IF DE+D++   RG     G    ++ ++Q+LVE+DG   N + + II
Sbjct: 239 MFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEAN-EGVVII 297

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD ALLRPGRFD+ + +  N + + RE+ILK   +K K +  V L  I    
Sbjct: 298 AATNRPDVLDRALLRPGRFDRQIAV-ANPDINGREQILKVHLKKIKYNSTV-LARIIARG 355

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTLE 484
            P F+GA++  L  +A   AA+   K ++
Sbjct: 356 TPGFSGAELANLVNEAALIAARLGKKEVD 384

---

>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 58/149 (38%), Positives = 89/149 (59%), Gaps = 1/149 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE+ +   PC+IF DE+D++   RG     G    ++ ++Q+LVE+DG   N + + II
Sbjct: 239 MFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEAN-EGVVII 297

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD ALLRPGRFD+ + +  N + + RE+ILK   +K K +  V L  I    
Sbjct: 298 AATNRPDVLDRALLRPGRFDRQIAV-ANPDINGREQILKVHLKKIKYNSTV-LARIIARG 355

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTLE 484
            P F+GA++  L  +A   AA+   K ++
Sbjct: 356 TPGFSGAELANLVNEAALIAARLGKKEVD 384

---

>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 63/168 (37%), Positives = 94/168 (55%), Gaps = 1/168 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F+KA+   PC++F DE+D++   RG+    G    ++ ++QLL E+DG   N+  + II
Sbjct: 257 LFKKAKENSPCIVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNT-GIIII 315

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNR D+LD+ALLRPGRFD+ + + V  +   R  IL    R  KL  ++SL  IA+  
Sbjct: 316 AATNRVDVLDAALLRPGRFDRQVTVDV-PDVKGRLEILNVHARNKKLDLSISLELIAKR- 373

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETE 541
            P F+GAD+  L  +A    A+R  K +        DA  + VI   E
Sbjct: 374 TPGFSGADLANLLNEAAILTARRRKKQITIS---EIDASIDRVIAGME 418

---

>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 60/152 (39%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
           IFE AR   P +IF DELDS+A  R   +  +   + R + QLL E+DG  D  +++ II
Sbjct: 244 IFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGF-DKRKNIRII 302

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGV-NTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
            ATNRPD+LD A+LRPGRFD+L+++ +   EA  R +ILK    K  L E++    +A+ 
Sbjct: 303 AATNRPDVLDPAILRPGRFDRLVHVPMPGIEA--RGKILKIHCEKMTLAEDIDFKKLAK- 359

Query: 395 CPPNFTGADIYALCADAWFHAAKRSVKTLEAD 490
                +GAD+ A+  +A   A +R  + +E +
Sbjct: 360 ATEGMSGADLKAIATEAGMFAVRRDKELVEME 391

---

>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 54/143 (37%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F+KA+   PC++F DE+D++   RG     G    ++ ++QLL E+DG S ++  + ++
Sbjct: 255 LFKKAKEKAPCIVFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDT-GVIVV 313

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNR D+LDSALLRPGRFD+ + + +    + R  ILK  ++K K+H++V LL +    
Sbjct: 314 AATNRIDVLDSALLRPGRFDRQIMVSL-PNINGRLAILKVHSKKKKIHKDV-LLEVIARR 371

Query: 398 PPNFTGADIYALCADAWFHAAKR 466
            P F+GAD+  L  +A     +R
Sbjct: 372 TPGFSGADLANLLNEAAILTVRR 394

---

>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 56/143 (39%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F+KA+   PC++F DE+D++   RG+    G    ++ ++QLL E+DG   N+  + +I
Sbjct: 257 LFKKAKDNAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNT-GVIVI 315

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNR D+LDSALLRPGRFD+ + + V  +   R  IL+   +  K+   VSL +IA+  
Sbjct: 316 AATNRADILDSALLRPGRFDRQVSVDV-PDFRGRLAILEVHAKNKKMESKVSLETIARR- 373

Query: 398 PPNFTGADIYALCADAWFHAAKR 466
            P F+GAD+  L  +A    A+R
Sbjct: 374 TPGFSGADLANLLNEAAILTARR 396

---

>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 63/156 (40%), Positives = 89/156 (57%), Gaps = 3/156 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQ 202
           R+   +FE AR   P +IF DE+D++   R   A SG   + R ++QLL E+DG  D   
Sbjct: 259 RLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGF-DPLD 317

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           D+ +I ATNR D+LD ALLRPGRFD+ + I +  E   R  I K  TR   L E+V L  
Sbjct: 318 DIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEG-RYEIFKIHTRDMNLAEDVDLQK 376

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAK--RSVKTLE 484
           +A+      +GADI A+C +A   A +  R + T++
Sbjct: 377 LAK-ITEGASGADIKAICTEAGMMAIREDRDIVTMD 411

---

>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 51/129 (39%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F++AR   P +IF DELD++  +RGS    G    ++ ++Q+LVE+DG+++N+  + I+
Sbjct: 296 MFKEARKLAPAIIFIDELDAVGRSRGSGIGGGNDEREQTLNQILVEMDGINENA-GILIM 354

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
           GATNR D+LD ALLRPGRFD+++ +G+  +   RE ILK  ++  +L + +    IA+  
Sbjct: 355 GATNRTDVLDPALLRPGRFDRIITVGL-PDIKEREEILKLHSKGKRLSKEIKFDKIAKR- 412

Query: 398 PPNFTGADI 424
            P ++GA +
Sbjct: 413 TPGYSGAQL 421

---

>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score = 96.3 bits (238), Expect = 5e-20
 Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGS-SADSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F KA+ A PC+IF DE+DS+   RG     S  V+++ ++QLL E+DG +  +  + ++
Sbjct: 315 LFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRT-GVVVM 373

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNR D+LD ALLRPGRFD+ + I +  +   RE ILK       L   +SLL +A+  
Sbjct: 374 AATNRLDVLDDALLRPGRFDRHIQINL-PDIKEREGILKVHAENKNLSSKISLLDVAKR- 431

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTL 481
            P F+GA +  +  +A   A + +  T+
Sbjct: 432 TPGFSGAQLENVINEATLLAVRDNRTTI 459

---

>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2|
          Length = 1091

 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 62/154 (40%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
 Frame = +2

Query: 8   EVENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL 187
           E E Q R+   +F++A   RP +IFFDE+D LAP R S  D   +   +VS LL  +DGL
Sbjct: 339 ESERQLRL---LFDQAYQMRPSIIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGL 393

Query: 188 SDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHE- 364
            D+  ++ +IGATNR D +D AL RPGRFD+     +  +   R+ ILK  TR +     
Sbjct: 394 -DSRGEIVVIGATNRLDAIDPALRRPGRFDREFLFSL-PDKEARKEILKIHTRDWNPKPL 451

Query: 365 NVSLLSIAQHCPPNFTGADIYALCADAWFHAAKR 466
           +  L  +A++C   + GADI ++CA+A   A +R
Sbjct: 452 DTFLEELAENC-VGYRGADIKSICAEAALCALRR 484

---

>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 425

 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 1/153 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F+ ARS + C++FFDE+D++  AR      G   + R + +++ ++DG  D   
Sbjct: 247 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGF-DARG 305

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ ++ ATNRPD LD ALLRPGR D+ +  G+  +   R +I K  TR      ++    
Sbjct: 306 NIKVLMATNRPDTLDPALLRPGRLDRKVEFGL-PDLESRTQIFKIHTRTMNCERDIRFEL 364

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSVKTL 481
           +A+ C PN TGADI ++C +A  +A +   KT+
Sbjct: 365 LARLC-PNSTGADIRSVCTEAGMYAIRARRKTV 396

---

>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory
           particle triple-A ATPase subunit 1a)
          Length = 426

 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 1/153 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F+ ARS + C++FFDE+D++  AR      G   + R + +++ ++DG  D   
Sbjct: 248 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGF-DARG 306

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ ++ ATNRPD LD ALLRPGR D+ +  G+  +   R +I K  TR      ++    
Sbjct: 307 NIKVLMATNRPDTLDPALLRPGRLDRKVEFGL-PDLESRTQIFKIHTRTMNCERDIRFEL 365

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSVKTL 481
           +A+ C PN TGADI ++C +A  +A +   KT+
Sbjct: 366 LARLC-PNSTGADIRSVCTEAGMYAIRARRKTV 397

---

>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score = 95.5 bits (236), Expect = 9e-20
 Identities = 55/148 (37%), Positives = 88/148 (59%), Gaps = 1/148 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGS-SADSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F KA+ A PC+IF DE+DS+   RG     S  V+++ ++QLL E+DG +  +  + ++
Sbjct: 312 LFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRT-GVVVM 370

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNR D+LD ALLRPGRFD+ + I +  +   RE IL+   +   L   +SLL +A+  
Sbjct: 371 AATNRLDVLDDALLRPGRFDRHIQINL-PDIKEREGILQVHAKNKNLSSKISLLDVAKR- 428

Query: 398 PPNFTGADIYALCADAWFHAAKRSVKTL 481
            P F+GA +  +  +A   A + +  T+
Sbjct: 429 TPGFSGAQLENVINEATLLAVRDNRTTI 456

---

>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 95.5 bits (236), Expect = 9e-20
 Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 1/153 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F+ ARS + C++FFDE+D++  AR      G   + R + +++ ++DG  D   
Sbjct: 248 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGF-DARG 306

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ ++ ATNRPD LD ALLRPGR D+ +  G+  +   R +I K  TR      ++    
Sbjct: 307 NIKVLMATNRPDTLDPALLRPGRLDRKVEFGL-PDLEGRTQIFKIHTRTMNCERDIRFEL 365

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSVKTL 481
           +A+ C PN TGADI ++C +A  +A +   KT+
Sbjct: 366 LARLC-PNSTGADIRSVCTEAGMYAIRARRKTV 397

---

>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 95.5 bits (236), Expect = 9e-20
 Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 1/153 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F+ ARS + C++FFDE+D++  AR      G   + R + +++ ++DG  D   
Sbjct: 248 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGF-DARG 306

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ ++ ATNRPD LD ALLRPGR D+ +  G+  +   R +I K  TR      ++    
Sbjct: 307 NIKVLMATNRPDTLDPALLRPGRLDRKVEFGL-PDLEGRTQIFKIHTRTMNCERDIRFEL 365

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSVKTL 481
           +A+ C PN TGADI ++C +A  +A +   KT+
Sbjct: 366 LARLC-PNSTGADIRSVCTEAGMYAIRARRKTV 397

---

>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2|
          Length = 1390

 Score = 95.5 bits (236), Expect = 9e-20
 Identities = 62/154 (40%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
 Frame = +2

Query: 8   EVENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL 187
           E E Q R+   +F++A   RP +IFFDE+D LAP R S  D   +   +VS LL  +DGL
Sbjct: 508 ESERQLRL---LFDQAYQMRPSIIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGL 562

Query: 188 SDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHE- 364
            D+  ++ +IGATNR D +D AL RPGRFD+     +  +   R+ ILK  TR +     
Sbjct: 563 -DSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSL-PDKEARKEILKIHTRDWNPKPL 620

Query: 365 NVSLLSIAQHCPPNFTGADIYALCADAWFHAAKR 466
           +  L  +A++C   + GADI ++CA+A   A +R
Sbjct: 621 DTFLEELAENC-VGYCGADIKSICAEAALCALRR 653

---

>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F  AR   PC++F DE+D++   RG     G    +  ++Q+LVE+DG + +S ++ ++
Sbjct: 258 MFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFN-SSTNVVVL 316

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH- 394
             TNRPD+LD AL RPGRFD+ +YIG   +   R  I K   R  KL  ++S  ++++  
Sbjct: 317 AGTNRPDILDPALTRPGRFDRQIYIG-PPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKL 375

Query: 395 --CPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVI 529
               P FTGADI  +C +A   AA+    +++    R+ +   E VI
Sbjct: 376 AALTPGFTGADISNVCNEAALIAARHLSPSVQ---ERHFEQAIERVI 419

---

>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 58/147 (39%), Positives = 85/147 (57%), Gaps = 1/147 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQ 202
           R+   +FE A+   P +IF DE+D++A  R  S+ SG   + R + QLL E+DG      
Sbjct: 231 RLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRG- 289

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ I+ ATNRPD+LD ALLRPGRFD+ + + +  E   RE ILK  T    L E V +  
Sbjct: 290 NVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRRE-ILKIHTSGMALAEEVDIEL 348

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAK 463
           +A+      +GAD+ A+C +A   A +
Sbjct: 349 LAR-ITDGASGADLKAICTEAGMFAIR 374

---

>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 92.4 bits (228), Expect = 7e-19
 Identities = 55/151 (36%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           +F++AR   P +IF DELD++  +R ++  S    ++ ++QLLVE+DG  DN+  L ++ 
Sbjct: 225 LFKQAREKAPGIIFIDELDAIGKSRLNAIHSNDEREQTLNQLLVEMDGF-DNTTGLILLA 283

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNRPD+LD ALLRPGRFD+ + +    +   RE IL+   +  KL   V L ++A+   
Sbjct: 284 ATNRPDVLDPALLRPGRFDRQVCVD-RPDLKGREAILRIHAQNVKLAPEVDLKAVAR-IT 341

Query: 401 PNFTGADIYALCADAWFHAAKRS-VKTLEAD 490
             ++GAD+  +  +A   A +    + +E D
Sbjct: 342 GGYSGADLANVVNEAALLAVRSGRAQVIETD 372

---

>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome|
           regulatory subunit 2)
          Length = 407

 Score = 92.4 bits (228), Expect = 7e-19
 Identities = 55/142 (38%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGV-MDRVVSQLLVEIDGLSDNSQDLFII 217
           +F+ AR   P V+F DE+D++A  R  S  SG   + R + QLL E+DG  D   D+ II
Sbjct: 234 LFQVARDHEPAVVFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLSEMDGF-DERGDIRII 292

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNR D+LD A+LRPGRFD+L+ +  +     RE+I +  TR   + ++V    +A   
Sbjct: 293 AATNRFDMLDRAILRPGRFDRLIEV-PHPNVGGREKIFRIHTRAMNVADSVDFGELAAD- 350

Query: 398 PPNFTGADIYALCADAWFHAAK 463
             + +GAD+ A+C +A   A +
Sbjct: 351 TGDLSGADVKAICTEAGMFAIR 372

---

>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18|
          Length = 758

 Score = 92.4 bits (228), Expect = 7e-19
 Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 4/162 (2%)
 Frame = +2

Query: 74  VIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSA 253
           +I FDELDS+   RGS  D  GV D VV+QLL ++DG+ D   ++ +IG TNR DL+DSA
Sbjct: 345 IIIFDELDSVFKQRGSRGDGTGVGDNVVNQLLAKMDGV-DQLNNILVIGMTNRKDLIDSA 403

Query: 254 LLRPGRFDKLLYIGVNTEASYRERILKAQTRKYK----LHENVSLLSIAQHCPPNFTGAD 421
           LLRPGRF+  + I +  E   R +I   QT+K +    + ++V+L  +A     NF+GA+
Sbjct: 404 LLRPGRFEVQVEIHLPDEKG-RLQIFDIQTKKMRENNMMSDDVNLAELAA-LTKNFSGAE 461

Query: 422 IYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
           I  L   A   A  ++V  +    ++ N     ++ V  EDF
Sbjct: 462 IEGLVKSASSFAINKTV-NIGKGATKLNTKDIAKLKVTREDF 502

---

>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score = 92.4 bits (228), Expect = 7e-19
 Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 1/156 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQ 202
           R+   IF  AR   P ++F DE+D++A  R     SG   + R + QLL E+DG  D   
Sbjct: 219 RLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGF-DPLD 277

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNR DL+D A+LRPGRFD+++ + + +    R  IL   TRK K+  +V L +
Sbjct: 278 NVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRG-RLEILGIHTRKAKMAPDVDLEA 336

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEAD 490
           IA+     F+GAD+ A+  +A ++A +R  + +  D
Sbjct: 337 IAK-LTEGFSGADLKAVVVEAGYNAIRRGSRVITMD 371

---

>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F  AR   PC++F DE+D++   RG     G    +  ++QLLVE+DG +  + ++ I+
Sbjct: 392 LFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTT-NVVIL 450

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQ-- 391
             TNRPD+LD ALLRPGRFD+ ++IG   +   R  I K   R  KL   +    +A+  
Sbjct: 451 AGTNRPDILDPALLRPGRFDRQIFIG-PPDIKGRASIFKVHLRPLKLDSTLEKDKLARKL 509

Query: 392 -HCPPNFTGADIYALCADAWFHAAK 463
               P F+GAD+  +C +A   AA+
Sbjct: 510 ASLTPGFSGADVANVCNEAALIAAR 534

---

>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 58/152 (38%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFII 217
           IFE AR   P +IF DELDS+A  R   +  +   + R + QLL E+DG  D  +++ II
Sbjct: 244 IFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGF-DKRKNIRII 302

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGV-NTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
            ATNRPD+LD A+LRPGRFD+L+++ +   EA  R +ILK    K  L  ++    +A+ 
Sbjct: 303 AATNRPDVLDPAILRPGRFDRLVHVPMPGIEA--RGKILKIHCGKMTLAGDIDFKKLAK- 359

Query: 395 CPPNFTGADIYALCADAWFHAAKRSVKTLEAD 490
                +GAD+ A+  +A   A ++    +E +
Sbjct: 360 VTEGMSGADLKAIATEAGMFAVRKDKALVEME 391

---

>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F  AR   PC++F DE+D++   RG     G    +  ++QLLVE+DG +  + ++ I+
Sbjct: 391 LFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTT-NVVIL 449

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQ-- 391
             TNRPD+LD ALLRPGRFD+ ++IG   +   R  I K   R  KL   +    +A+  
Sbjct: 450 AGTNRPDILDPALLRPGRFDRQIFIG-PPDIKGRASIFKVHLRPLKLDSALEKDKLARKL 508

Query: 392 -HCPPNFTGADIYALCADAWFHAAK 463
               P F+GAD+  +C +A   AA+
Sbjct: 509 ASLTPGFSGADVANVCNEAALIAAR 533

---

>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 54/153 (35%), Positives = 91/153 (59%), Gaps = 6/153 (3%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGS--SADSGGVMDRVVSQLLVEIDGLSDNSQDLFI 214
           +F++AR+  PC+++ DE+D++   R +  S  S    ++ ++QLLVE+DG+   +  + +
Sbjct: 393 LFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMG-TTDHVIV 451

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS-IAQ 391
           + +TNR D+LD AL+RPGR D+ ++I + T    RE I +   +  KL ++ +  S    
Sbjct: 452 LASTNRADILDGALMRPGRLDRHVFIDLPTLQERRE-IFEQHLKSLKLTQSSTFYSQRLA 510

Query: 392 HCPPNFTGADIYALCADAWFHAAKR---SVKTL 481
              P F+GADI  +C +A  HAA+    SV TL
Sbjct: 511 ELTPGFSGADIANICNEAALHAAREGHTSVHTL 543

---

>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7|
          Length = 435

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 55/154 (35%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +FE AR+ + C+IFFDE+D++  AR      G   + R + +L+ ++DG  D   
Sbjct: 257 RMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGF-DPRG 315

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ ++ ATNRPD LD AL+RPGR D+ +   +  + + R  ILK   ++  +  ++    
Sbjct: 316 NIKVLMATNRPDTLDPALMRPGRLDRKVEFAL-PDLAGRAHILKIHAKQMSVERDIRYDL 374

Query: 383 IAQHCPPNFTGADIYALCADAWFHA--AKRSVKT 478
           +A+ C PN TGA+I ++C +A   A  A+R V T
Sbjct: 375 LARLC-PNSTGAEIRSVCTEAGMFAIRARRKVAT 407

---

>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome|
           regulatory subunit 1)
          Length = 411

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 1/147 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGV-MDRVVSQLLVEIDGLSDNSQ 202
           R+   +FE A    P +IF DE+D++A  R  S  SG   + R + QLL E+DG  D   
Sbjct: 232 RLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKTSGDAEVQRTMMQLLSEMDGF-DERG 290

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           D+ II ATNR D+LDSA+LRPGRFD+L+ +  N     RERIL+    +  + ++V    
Sbjct: 291 DIRIIAATNRFDMLDSAILRPGRFDRLIEV-PNPNPDARERILEIHAGEMNVADSVDFSD 349

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAK 463
           +A      F+GA + +L  +A   A +
Sbjct: 350 LAAD-TAEFSGAQLASLATEAGMFAIR 375

---

>TBP7_CAEEL (P54816) TAT-binding homolog 7|
          Length = 1242

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 60/148 (40%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
 Frame = +2

Query: 8   EVENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL 187
           E E Q R+   +F++A + RP +IFFDE+D LAP R S  D   +   +VS LL  +DGL
Sbjct: 473 ESERQLRL---LFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQ--IHASIVSTLLALMDGL 527

Query: 188 SDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHEN 367
            D   ++ +IGATNR D LD AL RPGRFD+ L   +  + + R +IL   T K++ ++ 
Sbjct: 528 -DGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSL-PDLNARRQILDIHTSKWEENKP 585

Query: 368 V--SLLSIAQHCPPNFTGADIYALCADA 445
           +  +L +IA+     + GAD+  LC +A
Sbjct: 586 IPETLDAIAER-TSGYCGADLKFLCTEA 612

---

>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 433

 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 55/154 (35%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +FE AR+ + C+IFFDE+D++  AR      G   + R + +L+ ++DG  D   
Sbjct: 255 RMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGF-DPRG 313

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ ++ ATNRPD LD AL+RPGR D+ +   +  +   R  I K   R   +  ++    
Sbjct: 314 NIKVLMATNRPDTLDPALMRPGRLDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFEL 372

Query: 383 IAQHCPPNFTGADIYALCADAWFHA--AKRSVKT 478
           +A+ C PN TGA+I ++C +A   A  A+R V T
Sbjct: 373 LARLC-PNSTGAEIRSVCTEAGMFAIRARRKVAT 405

---

>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +FE AR+ + C+IFFDE+D++  AR      G   + R + +L+ ++DG  D   
Sbjct: 254 RMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGF-DPRG 312

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ ++ ATNRPD LD AL+RPGR D+ +   +  +   R  I K   R   +  ++    
Sbjct: 313 NIKVLMATNRPDTLDPALMRPGRLDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFEL 371

Query: 383 IAQHCPPNFTGADIYALCADAWFHA--AKRSVKT 478
           +A+ C PN TGA+I ++C +A   A  A+R + T
Sbjct: 372 LARLC-PNSTGAEIRSVCTEAGMFAIRARRKIAT 404

---

>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +FE AR+ + C+IFFDE+D++  AR      G   + R + +L+ ++DG  D   
Sbjct: 254 RMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGF-DPRG 312

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ ++ ATNRPD LD AL+RPGR D+ +   +  +   R  I K   R   +  ++    
Sbjct: 313 NIKVLMATNRPDTLDPALMRPGRLDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFEL 371

Query: 383 IAQHCPPNFTGADIYALCADAWFHA--AKRSVKT 478
           +A+ C PN TGA+I ++C +A   A  A+R + T
Sbjct: 372 LARLC-PNSTGAEIRSVCTEAGMFAIRARRKIAT 404

---

>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +FE AR+ + C+IFFDE+D++  AR      G   + R + +L+ ++DG  D   
Sbjct: 254 RMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGF-DPRG 312

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ ++ ATNRPD LD AL+RPGR D+ +   +  +   R  I K   R   +  ++    
Sbjct: 313 NIKVLMATNRPDTLDPALMRPGRLDRKIEFSL-PDLEGRTHIFKIHARSMSVERDIRFEL 371

Query: 383 IAQHCPPNFTGADIYALCADAWFHA--AKRSVKT 478
           +A+ C PN TGA+I ++C +A   A  A+R + T
Sbjct: 372 LARLC-PNSTGAEIRSVCTEAGMFAIRARRKIAT 404

---

>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein) (SKD2 protein)
          Length = 744

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 63/165 (38%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
 Frame = +2

Query: 74  VIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSA 253
           +I FDE+D++   RGS A S GV D VV+QLL +IDG+ +   ++ +IG TNRPDL+D A
Sbjct: 324 IIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGV-EQLNNILVIGMTNRPDLIDEA 382

Query: 254 LLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHE----NVSLLSIAQHCPPNFTGAD 421
           LLRPGR +  + IG+  E   R +IL   T + + H+    +V +  +A     NF+GA+
Sbjct: 383 LLRPGRLEVKMEIGLPDEKG-RLQILHIHTARMRGHQLLSADVDIKELAVE-TKNFSGAE 440

Query: 422 IYALCADAWFHAAKRSVKT---LEADPSRNNDAGAEEVIVETEDF 547
           +  L   A   A  R +K    +E D  +     AE + V   DF
Sbjct: 441 LEGLVRAAQSTAMNRHIKASTKVEVDMEK-----AESLQVTRGDF 480

---

>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 63/165 (38%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
 Frame = +2

Query: 74  VIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSA 253
           +I FDE+D++   RGS A S GV D VV+QLL +IDG+ +   ++ +IG TNRPDL+D A
Sbjct: 324 IIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGV-EQLNNILVIGMTNRPDLIDEA 382

Query: 254 LLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHE----NVSLLSIAQHCPPNFTGAD 421
           LLRPGR +  + IG+  E   R +IL   T + + H+    +V +  +A     NF+GA+
Sbjct: 383 LLRPGRLEVKMEIGLPDEKG-RLQILHIHTARMRGHQLLSADVDIKELAVE-TKNFSGAE 440

Query: 422 IYALCADAWFHAAKRSVKT---LEADPSRNNDAGAEEVIVETEDF 547
           +  L   A   A  R +K    +E D  +     AE + V   DF
Sbjct: 441 LEGLVRAAQSTAMNRHIKASTKVEVDMEK-----AESLQVTRGDF 480

---

>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 63/165 (38%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
 Frame = +2

Query: 74  VIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSA 253
           +I FDE+D++   RGS A S GV D VV+QLL +IDG+ +   ++ +IG TNRPDL+D A
Sbjct: 324 IIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGV-EQLNNILVIGMTNRPDLIDEA 382

Query: 254 LLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHE----NVSLLSIAQHCPPNFTGAD 421
           LLRPGR +  + IG+  E   R +IL   T + + H+    +V +  +A     NF+GA+
Sbjct: 383 LLRPGRLEVKMEIGLPDEKG-RLQILHIHTARMRGHQLLSADVDIKELAVE-TKNFSGAE 440

Query: 422 IYALCADAWFHAAKRSVKT---LEADPSRNNDAGAEEVIVETEDF 547
           +  L   A   A  R +K    +E D  +     AE + V   DF
Sbjct: 441 LEGLVRAAQSTAMNRHIKASTKVEVDMEK-----AESLQVTRGDF 480

---

>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 1/147 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQ 202
           R+   +FE A+   P +IF DE+D++   R      G   ++R + QLL E+DG  D   
Sbjct: 220 RLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGF-DPRG 278

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNRPD+LD ALLRPGRFD+L+ + +  +   R  ILK  TR+ KL +NV L  
Sbjct: 279 NVKVIAATNRPDILDPALLRPGRFDRLIEVPL-PDFEGRLEILKVHTRRMKL-KNVDLRV 336

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAK 463
           IA+      +GAD+ A+  +A   A +
Sbjct: 337 IAE-ITEGASGADLKAIATEAGMFAIR 362

---

>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein|
           AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
          Length = 761

 Score = 89.4 bits (220), Expect = 6e-18
 Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 8/151 (5%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDR---VVSQLLVEIDGLSDNSQDLF 211
           +F +ARS  P +IF DE+D++   RG     GG  D     ++QLLVE+DG + + Q + 
Sbjct: 372 LFTQARSMAPSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQ-VV 430

Query: 212 IIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKL-----HENVSL 376
           ++  TNRPD+LD+AL+RPGRFD+ + I  + + + R++I     ++  L      +  +L
Sbjct: 431 VLAGTNRPDVLDNALMRPGRFDRHIQID-SPDVNGRQQIYLVHLKRLNLDPLLTDDMNNL 489

Query: 377 LSIAQHCPPNFTGADIYALCADAWFHAAKRS 469
                   P FTGADI   C +A   AA+ +
Sbjct: 490 SGKLATLTPGFTGADIANACNEAALIAARHN 520

---

>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog|
          Length = 438

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 53/154 (34%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +FE AR+ + C+IFFDE+D++  AR      G   + R + +L+ ++DG  D   
Sbjct: 259 RMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGF-DPRG 317

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ ++ ATNRP+ LD AL+RPGR D+ +  G+  +   R  IL+   +   + +++    
Sbjct: 318 NIKVLFATNRPNTLDEALMRPGRIDRKVEFGL-PDLEGRAHILRIHAKSMAIDKDIRWEL 376

Query: 383 IAQHCPPNFTGADIYALCADAWFHA--AKRSVKT 478
           IA+ CP   TGA++ ++C +A   A  A+R V T
Sbjct: 377 IARLCPSQ-TGAELRSVCTEAGMFAIRARRRVAT 409

---

>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive|
           fusion protein 1) (NEM-sensitive fusion protein 1)
           (dNsf-1) (Protein comatose)
          Length = 745

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 67/186 (36%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
 Frame = +2

Query: 17  NQRRMSGXIFEKARSARPC----VIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDG 184
           N RR+     E+ +   P     +I FDE+D++   RGS A + GV D VV+QLL +IDG
Sbjct: 301 NVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDTVVNQLLTKIDG 360

Query: 185 LSDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKY---- 352
           + D   ++ +IG TNR D++D ALLRPGR +  + I +  E   R +IL   T++     
Sbjct: 361 V-DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQG-RVQILNIHTKRMREFN 418

Query: 353 KLHENVSLLSIAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGA-EEVI 529
           K++++V    IA     NF+GA++  L   A   A  R +K   AD     D  A E++ 
Sbjct: 419 KINDDVDNKEIAA-LTKNFSGAELEGLVRAAQSSAMNRLIK---ADAKVTVDPEAMEKLK 474

Query: 530 VETEDF 547
           V  +DF
Sbjct: 475 VNRDDF 480

---

>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 57/147 (38%), Positives = 86/147 (58%), Gaps = 1/147 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQ 202
           R+   +FE A+   P +IF DE+D++   R      G   ++R + QLL E+DG  D   
Sbjct: 220 RLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGF-DPRG 278

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNRPD+LD ALLRPGRFD+L+ + +  +   R  ILK  TR+ KL + V L +
Sbjct: 279 NVKVIAATNRPDILDPALLRPGRFDRLIEVPL-PDFEGRLEILKVHTRRMKL-KGVDLRA 336

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAK 463
           IA+      +GAD+ A+  +A   A +
Sbjct: 337 IAE-MTEGASGADLKAIATEAGMFAIR 362

---

>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 54/147 (36%), Positives = 85/147 (57%), Gaps = 1/147 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQ 202
           R+   +FE A+   P +IF DE+D++   R     SG   + R + QLL E+DG  D   
Sbjct: 214 RIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGF-DPLD 272

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ II ATNR D+LD ALLRPGRFD+++ + +  +   R  I     +K K+ +N++L  
Sbjct: 273 NVKIIAATNRIDILDPALLRPGRFDRIIEVPL-PDFKGRTEIFNIYLKKMKIEDNINLEL 331

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAK 463
           ++Q     F+GADI  +C +A + A +
Sbjct: 332 LSQ-LTEGFSGADIKNVCVEAAYMAIR 357

---

>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 824

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 62/165 (37%), Positives = 94/165 (56%), Gaps = 7/165 (4%)
 Frame = +2

Query: 74  VIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSA 253
           +I FDE+D++   RGS A S  V D VV+QLL ++DG+ +   ++ +IG TNR D++D A
Sbjct: 401 IIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKMDGV-EQLNNILVIGMTNRRDMIDEA 459

Query: 254 LLRPGRFDKLLYIGVNTEASYRERILK---AQTRKY-KLHENVSLLSIAQHCPPNFTGAD 421
           LLRPGR +  + + +  E   R +ILK   A+ R+Y K+  NV L  I++    NF+GA+
Sbjct: 460 LLRPGRLEVQMEVSLPDETG-RLQILKIHTARMREYNKMDPNVDLEDISKR-TKNFSGAE 517

Query: 422 IYALCADAWFHAAKRSVKT---LEADPSRNNDAGAEEVIVETEDF 547
           +  L   A   A  R VK     +ADP        E++ + + DF
Sbjct: 518 LEGLVRAAQSSAMNRLVKAGGKAQADPD-----AIEKLAINSGDF 557

---

>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 49/144 (34%), Positives = 86/144 (59%), Gaps = 1/144 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +F++A+   PC+IF DE+D++   RG+    G    ++ ++QLLVE+DG  D +  + +I
Sbjct: 247 LFDQAKQNSPCIIFVDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRA-GVILI 305

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD ALLRPGRFD+ + +  N + + R  +L+  ++   + ++  L  +A+  
Sbjct: 306 AATNRPDILDPALLRPGRFDRQIPVS-NPDLAGRRAVLRVHSKGKPIADDADLDGLAKR- 363

Query: 398 PPNFTGADIYALCADAWFHAAKRS 469
               TGAD+  +  +A    A+ +
Sbjct: 364 TVGMTGADLANVVNEAALLTAREN 387

---

>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 50/144 (34%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE+A+   PC+IF DE+D++   RG+    G    ++ ++QLLVE+DG  D +  + +I
Sbjct: 247 LFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRA-GVILI 305

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD ALLRPGRFD+ + +  N + + R  +L+  ++   +  +  L  +A+  
Sbjct: 306 AATNRPDILDPALLRPGRFDRQIPVS-NPDLAGRRAVLRVHSKGKPMAADADLDGLAKR- 363

Query: 398 PPNFTGADIYALCADAWFHAAKRS 469
               TGAD+  +  +A    A+ +
Sbjct: 364 TVGMTGADLANVINEAALLTAREN 387

---

>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 50/144 (34%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFII 217
           +FE+A+   PC+IF DE+D++   RG+    G    ++ ++QLLVE+DG  D +  + +I
Sbjct: 247 LFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRA-GVILI 305

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHC 397
            ATNRPD+LD ALLRPGRFD+ + +  N + + R  +L+  ++   +  +  L  +A+  
Sbjct: 306 AATNRPDILDPALLRPGRFDRQIPVS-NPDLAGRRAVLRVHSKGKPMAADADLDGLAKR- 363

Query: 398 PPNFTGADIYALCADAWFHAAKRS 469
               TGAD+  +  +A    A+ +
Sbjct: 364 TVGMTGADLANVINEAALLTAREN 387

---

>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 424

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 52/142 (36%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           F+ A+   PC+IF DE+D++   R  S  SG   + R + +LL ++DG S + + + +I 
Sbjct: 257 FQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDER-IKVIA 315

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNR D+LD AL+R GR D+ +     TE + R RIL+  +RK  +H +V+   +A+   
Sbjct: 316 ATNRADILDPALMRSGRLDRKIEFPHPTEEA-RARILQIHSRKMNVHPDVNFEELAR-ST 373

Query: 401 PNFTGADIYALCADAWFHAAKR 466
            +F GA + A+C +A   A +R
Sbjct: 374 DDFNGAQLKAVCVEAGMLALRR 395

---

>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin) (Lipotransin)
          Length = 491

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 61/175 (34%), Positives = 97/175 (55%), Gaps = 6/175 (3%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL------SDNSQ 202
           +FE AR   P  IF DE+DS+   RG+S +      R+ ++LLV++DG+       D S+
Sbjct: 293 LFEMARFYSPATIFIDEIDSICSRRGTS-EEHEASRRMKAELLVQMDGVGGASENDDPSK 351

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
            + ++ ATN P  +D AL R  R +K +YI +   A  RE +L+   R+ +L ++V+L S
Sbjct: 352 MVMVLAATNFPWDIDEALRR--RLEKRIYIPL-PSAKGREELLRISLRELELADDVNLAS 408

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
           IA++    ++GADI  +C DA   A +R ++ L  +  RN    A  +    EDF
Sbjct: 409 IAENM-EGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSREAMHMPTTMEDF 462

---

>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome|
           regulatory particle ATPase-like protein 4)
          Length = 406

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 55/149 (36%), Positives = 84/149 (56%), Gaps = 3/149 (2%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR---GSSADSGGVMDRVVSQLLVEIDGLSDN 196
           RM   +F  AR  +PC++F DE+D++   R   G+SAD    + R + +LL ++DG  D+
Sbjct: 230 RMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADRE--IQRTLMELLNQLDGF-DS 286

Query: 197 SQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSL 376
              + +I ATNRPD LD ALLRPGR D+ + IG+  E S R  ILK  + K   H  +  
Sbjct: 287 LGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS-RLEILKIHSNKITKHGEIDF 345

Query: 377 LSIAQHCPPNFTGADIYALCADAWFHAAK 463
            ++ +     F+ AD+  +C +A   A +
Sbjct: 346 EAVVK-LSDGFSAADLRNVCTEAGMFAIR 373

---

>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 396

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 57/147 (38%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQ 202
           R+   +FE A+   P +IF DE+D++   R      G   ++R + QLL E+DG  D   
Sbjct: 217 RLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGF-DPRG 275

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNRPD+LD ALLRPGRFD+L+ + +  +   R  ILK  TR+ KL   V L  
Sbjct: 276 NVKVIAATNRPDILDPALLRPGRFDRLIEVPL-PDFEGRLEILKVHTRRMKL-RGVDLRL 333

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAK 463
           IA+      +GAD+ A+  +A   A +
Sbjct: 334 IAE-LTEGASGADLKAIATEAGMFAIR 359

---

>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 397

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 57/147 (38%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQ 202
           R+   +FE A+   P +IF DE+D++   R      G   ++R + QLL E+DG  D   
Sbjct: 218 RLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGF-DPRG 276

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNRPD+LD ALLRPGRFD+L+ + +  +   R  ILK  TRK  L + V L  
Sbjct: 277 NVKVIAATNRPDILDPALLRPGRFDRLIEVPL-PDYQGRLEILKVHTRKMNL-KGVDLRV 334

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAK 463
           IA+      +GAD+ A+  +A   A +
Sbjct: 335 IAE-ITEGASGADLKAIATEAGMFAIR 360

---

>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR---GSSADSGGVMDRVVSQLLVEIDGLSDN 196
           RM   +F  AR   P +IF DE+DS+  +R   GS  DS   + R + +LL ++DG  + 
Sbjct: 229 RMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSE--VQRTMLELLNQLDGF-EA 285

Query: 197 SQDLFIIGATNRPDLLDSALLRPGRFD-KLLYIGVNTEASYRERILKAQTRKYKLHENVS 373
           ++++ +I ATNR D+LDSALLRPGR D K+ +   N EA  R  ILK  +RK  L   ++
Sbjct: 286 TKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRGIN 343

Query: 374 LLSIAQHCPPNFTGADIYALCADAWFHAAK-RSVKTLEAD 490
           L  IA+   P  +GA++  +C +A  +A + R V   + D
Sbjct: 344 LRKIAE-LMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382

---

>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding
           protein homolog 10) (TBP10)
          Length = 406

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR---GSSADSGGVMDRVVSQLLVEIDGLSDN 196
           RM   +F  AR   P +IF DE+DS+  +R   GS  DS   + R + +LL ++DG  + 
Sbjct: 229 RMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSE--VQRTMLELLNQLDGF-EA 285

Query: 197 SQDLFIIGATNRPDLLDSALLRPGRFD-KLLYIGVNTEASYRERILKAQTRKYKLHENVS 373
           ++++ +I ATNR D+LDSALLRPGR D K+ +   N EA  R  ILK  +RK  L   ++
Sbjct: 286 TKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRGIN 343

Query: 374 LLSIAQHCPPNFTGADIYALCADAWFHAAK-RSVKTLEAD 490
           L  IA+   P  +GA++  +C +A  +A + R V   + D
Sbjct: 344 LRKIAE-LMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382

---

>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1)
          Length = 406

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR---GSSADSGGVMDRVVSQLLVEIDGLSDN 196
           RM   +F  AR   P +IF DE+DS+  +R   GS  DS   + R + +LL ++DG  + 
Sbjct: 229 RMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSE--VQRTMLELLNQLDGF-EA 285

Query: 197 SQDLFIIGATNRPDLLDSALLRPGRFD-KLLYIGVNTEASYRERILKAQTRKYKLHENVS 373
           ++++ +I ATNR D+LDSALLRPGR D K+ +   N EA  R  ILK  +RK  L   ++
Sbjct: 286 TKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRGIN 343

Query: 374 LLSIAQHCPPNFTGADIYALCADAWFHAAK-RSVKTLEAD 490
           L  IA+   P  +GA++  +C +A  +A + R V   + D
Sbjct: 344 LRKIAE-LMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382

---

>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR---GSSADSGGVMDRVVSQLLVEIDGLSDN 196
           RM   +F  AR   P +IF DE+DS+  +R   GS  DS   + R + +LL ++DG  + 
Sbjct: 229 RMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSE--VQRTMLELLNQLDGF-EA 285

Query: 197 SQDLFIIGATNRPDLLDSALLRPGRFD-KLLYIGVNTEASYRERILKAQTRKYKLHENVS 373
           ++++ +I ATNR D+LDSALLRPGR D K+ +   N EA  R  ILK  +RK  L   ++
Sbjct: 286 TKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRGIN 343

Query: 374 LLSIAQHCPPNFTGADIYALCADAWFHAAK-RSVKTLEAD 490
           L  IA+   P  +GA++  +C +A  +A + R V   + D
Sbjct: 344 LRKIAE-LMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382

---

>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5)
          Length = 406

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR---GSSADSGGVMDRVVSQLLVEIDGLSDN 196
           RM   +F  AR   P +IF DE+DS+  +R   GS  DS   + R + +LL ++DG  + 
Sbjct: 229 RMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSE--VQRTMLELLNQLDGF-EA 285

Query: 197 SQDLFIIGATNRPDLLDSALLRPGRFD-KLLYIGVNTEASYRERILKAQTRKYKLHENVS 373
           ++++ +I ATNR D+LDSALLRPGR D K+ +   N EA  R  ILK  +RK  L   ++
Sbjct: 286 TKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRGIN 343

Query: 374 LLSIAQHCPPNFTGADIYALCADAWFHAAK-RSVKTLEAD 490
           L  IA+   P  +GA++  +C +A  +A + R V   + D
Sbjct: 344 LRKIAE-LMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382

---

>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18|
          Length = 794

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 62/140 (44%), Positives = 79/140 (56%), Gaps = 6/140 (4%)
 Frame = +2

Query: 74  VIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDS 250
           VI FDELDS+   RGS    G GV D VV+QLL ++DG+ D   ++ +IG TNR DL+D+
Sbjct: 381 VIIFDELDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDGV-DQLNNILVIGMTNRLDLIDT 439

Query: 251 ALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH-----CPPNFTG 415
           ALLRPGRF+  + I +  E   R+ I    T+  KL EN  L S            NFTG
Sbjct: 440 ALLRPGRFEIQIEISLPDEKG-RKDIFLIHTK--KLTENGILSSDVNFDELSTLTKNFTG 496

Query: 416 ADIYALCADAWFHAAKRSVK 475
           A+I  LC  A  +A  R  K
Sbjct: 497 AEIEGLCNSAKSYAISRHTK 516

---

>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
          Length = 742

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 54/137 (39%), Positives = 83/137 (60%), Gaps = 4/137 (2%)
 Frame = +2

Query: 74  VIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSA 253
           VI FDE+D++  +RGS+ D  GV D +V+QLL +IDG+ +   ++ +IG TNR DLLD A
Sbjct: 321 VIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGV-EALNNVLLIGMTNRKDLLDEA 379

Query: 254 LLRPGRFDKLLYIGVNTEASYRERILKAQTRKYK----LHENVSLLSIAQHCPPNFTGAD 421
           LLRPGR +  + I +  EA  R +IL+  T K K    L  +++L  +A     N++GA+
Sbjct: 380 LLRPGRLEVQVEISLPDEAG-RLQILQIHTNKMKENSFLGTDINLQELAAR-TKNYSGAE 437

Query: 422 IYALCADAWFHAAKRSV 472
           +  +   A  +A  R +
Sbjct: 438 LEGVVKSATSYALNRQL 454

---

>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 55/148 (37%), Positives = 85/148 (57%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           +F +ARS  P +IF DELD++   R     +     + ++QLLVE+DG S  S  + IIG
Sbjct: 365 LFAQARSRAPAIIFIDELDAIGGKRNPKDQA--YAKQTLNQLLVELDGFSQTS-GIIIIG 421

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATN P+ LD AL RPGRFDK++ + +  +   R  ILK   +K  L +NV    IA+   
Sbjct: 422 ATNFPEALDKALTRPGRFDKVVNVDL-PDVRGRADILKHHMKKITLADNVDPTIIARG-T 479

Query: 401 PNFTGADIYALCADAWFHAAKRSVKTLE 484
           P  +GA++  L   A  +A +++  +++
Sbjct: 480 PGLSGAELANLVNQAAVYACQKNAVSVD 507

---

>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 61/175 (34%), Positives = 96/175 (54%), Gaps = 6/175 (3%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL------SDNSQ 202
           +FE AR   P  IF DE+DS+   RG+S +      RV ++LLV++DG+       D S+
Sbjct: 293 LFEMARFYSPATIFIDEIDSICSRRGTS-EEHEASRRVKAELLVQMDGVGGASENDDPSK 351

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
            + ++ ATN P  +D AL R  R +K +YI +   A  RE +L+   R+ +L ++V+L S
Sbjct: 352 MVMVLAATNFPWDIDEALRR--RLEKRIYIPL-PSAKGREELLRISLRELELADDVNLAS 408

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
           IA++    ++GADI  +C DA   A +R ++ L  +  RN       +    EDF
Sbjct: 409 IAENM-EGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSREEMHMPTTMEDF 462

---

>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 85.9 bits (211), Expect = 7e-17
 Identities = 61/175 (34%), Positives = 95/175 (54%), Gaps = 6/175 (3%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL------SDNSQ 202
           +FE AR   P  IF DE+DS+   RG+S +      RV ++LLV++DG+       D S+
Sbjct: 293 LFEMARFYSPATIFIDEIDSICSRRGTS-EEHEASRRVKAELLVQMDGVGGTSENDDPSK 351

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
            + ++ ATN P  +D AL R  R +K +YI +   A  RE +L+   R+ +L ++V L S
Sbjct: 352 MVMVLAATNFPWDIDEALRR--RLEKRIYIPL-PSAKGREELLRISLRELELADDVDLAS 408

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
           IA++    ++GADI  +C DA   A +R ++ L  +  RN       +    EDF
Sbjct: 409 IAENM-EGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTTMEDF 462

---

>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)|
           (TAT-binding homolog 3)
          Length = 467

 Score = 85.5 bits (210), Expect = 9e-17
 Identities = 52/154 (33%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +FE AR+ + C+IFFDE+D++  AR    A     + R + +L+ ++DG  D   
Sbjct: 289 RMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGF-DPRG 347

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ ++ ATNRP+ LD ALLRPGR D+ +   +  +   R  I +  ++   +   +    
Sbjct: 348 NIKVMFATNRPNTLDPALLRPGRIDRKVEFSL-PDLEGRANIFRIHSKSMSVERGIRWEL 406

Query: 383 IAQHCPPNFTGADIYALCADAWFHA--AKRSVKT 478
           I++ C PN TGA++ ++C +A   A  A+R V T
Sbjct: 407 ISRLC-PNSTGAELRSVCTEAGMFAIRARRKVAT 439

---

>PRS8_DROME (O18413) 26S protease regulatory subunit 8|
          Length = 405

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F  AR   P +IF DE+DS+  +R  S   G   + R + +LL ++DG  + ++
Sbjct: 228 RMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF-EATK 286

Query: 203 DLFIIGATNRPDLLDSALLRPGRFD-KLLYIGVNTEASYRERILKAQTRKYKLHENVSLL 379
           ++ +I ATNR D+LD ALLRPGR D K+ +   N EA  R  ILK  +RK  L   ++L 
Sbjct: 287 NIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRGINLR 344

Query: 380 SIAQHCPPNFTGADIYALCADAWFHAAK-RSVKTLEAD 490
            IA+   P  +GA++  +C +A  +A + R V   + D
Sbjct: 345 KIAE-LMPGASGAEVKGVCTEAGMYALRERRVHVTQED 381

---

>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)|
          Length = 402

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F  AR   P +IF DE+DS+  +R  S   G   + R + +LL ++DG  + ++
Sbjct: 225 RMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGF-EATK 283

Query: 203 DLFIIGATNRPDLLDSALLRPGRFD-KLLYIGVNTEASYRERILKAQTRKYKLHENVSLL 379
           ++ +I ATNR D+LD ALLRPGR D K+ +   N EA  R  ILK  +RK  L   ++L 
Sbjct: 284 NIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRGINLR 341

Query: 380 SIAQHCPPNFTGADIYALCADAWFHAAK-RSVKTLEAD 490
            IA+   P  +GA++  +C +A  +A + R V   + D
Sbjct: 342 KIAE-LMPGASGAEVKGVCTEAGMYALRERRVHVTQED 378

---

>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)|
          Length = 461

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 57/157 (36%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQD 205
           RM   +F  AR   P +IF DE+DS+       +     + R + +LL ++DG  + +++
Sbjct: 224 RMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGGDSEVQRTMLELLNQLDGF-EATKN 282

Query: 206 LFIIGATNRPDLLDSALLRPGRFD-KLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           + +I ATNR D+LDSALLRPGR D K+ +   N EA  R  ILK  +RK  L   ++L  
Sbjct: 283 IKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA--RLDILKIHSRKMNLTRGINLRK 340

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAK-RSVKTLEAD 490
           IA+   P  +GA++  +C +A  +A + R V   + D
Sbjct: 341 IAE-LMPGASGAEVKGVCTEAGMYALRERRVHVTQED 376

---

>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 50/151 (33%), Positives = 85/151 (56%), Gaps = 6/151 (3%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVM------DRVVSQLLVEIDGLSDNSQ 202
           +FE A+   P +IF DE+D++    G S  +GGV+      ++ ++QLL E+DG    + 
Sbjct: 254 LFETAKKQAPSIIFIDEIDAI----GKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENA 309

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
            + ++ ATNRP++LD AL+RPGRFD+ + +    + + R  ILK   +  KL  +V+L  
Sbjct: 310 PVIVLAATNRPEILDPALMRPGRFDRQVLVD-KPDFNGRVEILKVHIKGVKLANDVNLQE 368

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSVK 475
           +A+       GAD+  +  +A   A + + K
Sbjct: 369 VAK-LTAGLAGADLANIINEAALLAGRNNQK 398

---

>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 48/150 (32%), Positives = 84/150 (56%), Gaps = 2/150 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDR--VVSQLLVEIDGLSDNSQDLFI 214
           +FE A+   P +IF DE+D++  +R +     G  +R   ++QLL E+DG    +  + +
Sbjct: 254 LFETAKKQAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIV 313

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
           + ATNRP++LD AL+RPGRFD+ + +    + + R  ILK   +  KL  +V+L  +A+ 
Sbjct: 314 LAATNRPEILDPALMRPGRFDRQVLVD-KPDFNGRVEILKVHIKGVKLANDVNLQEVAK- 371

Query: 395 CPPNFTGADIYALCADAWFHAAKRSVKTLE 484
                 GAD+  +  +A   A + + K ++
Sbjct: 372 LTAGLAGADLANIINEAALLAGRNNQKEVK 401

---

>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive|
           fusion protein 2) (NEM-sensitive fusion protein 2)
           (dNsf-2)
          Length = 752

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 5/163 (3%)
 Frame = +2

Query: 74  VIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSA 253
           +I FDE+D++  ARGS A + GV D VV+QLL +IDG+ +   ++ +IG TNR D++D A
Sbjct: 329 IIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGV-EQLNNILVIGMTNRRDMIDEA 387

Query: 254 LLRPGRFDKLLYIGVNTEASYRERILKAQTRKY----KLHENVSLLSIAQHCPPNFTGAD 421
           LLRPGR +  + I +  E   R +IL   T++     K+  +V    IA     NF+GA+
Sbjct: 388 LLRPGRLEVQMEISLPNEQG-RVQILNIHTKRMRDFNKIASDVDNNEIAAK-TKNFSGAE 445

Query: 422 IYALCADAWFHAAKRSVKTLEADPSRNNDAGA-EEVIVETEDF 547
           +  L   A   A  R +K   AD   + D  A E++ V   DF
Sbjct: 446 LEGLVRAAQSTAMNRLIK---ADSKVHVDPEAMEKLRVTRADF 485

---

>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog|
          Length = 792

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 4/138 (2%)
 Frame = +2

Query: 74  VIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSA 253
           +I FDELD++   RGSS    GV D+VV+QLL ++DG+ D   ++ +IG TNR D++D A
Sbjct: 375 IIIFDELDAICKKRGSSGGDTGVGDQVVNQLLAKMDGV-DQLNNILVIGMTNRKDMIDEA 433

Query: 254 LLRPGRFDKLLYIGVNTEASYRERILKAQTRKYK----LHENVSLLSIAQHCPPNFTGAD 421
           LLRPGR +  + I +  E   R +ILK  T +      L  +V +  +A     NF+GA+
Sbjct: 434 LLRPGRLEVHMEISLPDEHG-RLQILKIHTSRMASNGILENDVDMEELAS-LTKNFSGAE 491

Query: 422 IYALCADAWFHAAKRSVK 475
           I  L   A   A  R +K
Sbjct: 492 IAGLIKSASSFAFYRHIK 509

---

>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
           (LEMA-1)
          Length = 423

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 51/142 (35%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           F+ A+   PC+IF DE+D++   R  S  SG   + R + +LL ++DG S + + + +I 
Sbjct: 256 FQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR-IKVIA 314

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNR D+LD AL+R GR D+ +     TE + R RIL+  +RK  ++ +V+   +A+   
Sbjct: 315 ATNRADILDPALMRSGRLDRKIEFPHPTEEA-RARILQIHSRKMNVNPDVNFEELAR-ST 372

Query: 401 PNFTGADIYALCADAWFHAAKR 466
            +F GA + A+C +A   A +R
Sbjct: 373 DDFNGAQLKAVCVEAGMLALRR 394

---

>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 638

 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDR--VVSQLLVEIDGLSDNSQDLFI 214
           +F+ A+   P +IF DE+D++  +R +     G  +R   ++QLL E+DG    +  + +
Sbjct: 260 LFDIAKKEAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIV 319

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
           + ATNRP++LD ALLRPGRFD+ + +    +   R  ILK   +  KL  +V L  IA+ 
Sbjct: 320 LAATNRPEILDPALLRPGRFDRQVLVD-KPDFKGRVEILKVHIKPVKLANDVDLQEIAK- 377

Query: 395 CPPNFTGADIYALCADAWFHAAKRSVKTLE 484
                 GAD+  +  +A   A + + K ++
Sbjct: 378 LTAGLAGADLANIINEAALLAGRNNQKEVK 407

---

>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein|
           homolog 10) (Fragment)
          Length = 389

 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 52/148 (35%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGG--VMDRVVSQLLVEIDGLSDNS 199
           RM   +F  AR   P +IF DE+DS+  +RG S   GG   + R + +LL ++DG  +++
Sbjct: 211 RMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGF-EST 269

Query: 200 QDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLL 379
           +++ ++  TNR D+LD ALLRPGR D+ +    N   + R  ILK  +RK  L   ++L 
Sbjct: 270 KNIKVLMCTNRIDILDPALLRPGRIDRKIEF-PNPGDAGRLDILKIHSRKMNLTRGINLK 328

Query: 380 SIAQHCPPNFTGADIYALCADAWFHAAK 463
            I+       +GA++ A+C +A  +A +
Sbjct: 329 KISDKM-NGASGAELKAVCTEAGMYALR 355

---

>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 392

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 56/152 (36%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQ 202
           R+   +FE AR   P ++F DE+D++   R     SG   + R + QLL EIDG      
Sbjct: 214 RIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGTSGEREIQRTLMQLLAEIDGFKP-LD 272

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGV-NTEASYRERILKAQTRKYKLHENVSLL 379
           ++ II ATNR D+LD ALLRPGRFD+L+ + + N E   R+ I +   +K K   N+   
Sbjct: 273 NVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEG--RKEIFRIYLQKMKTDGNIR-Y 329

Query: 380 SIAQHCPPNFTGADIYALCADAWFHAAKRSVK 475
            I       F+GA+I  +C +A + A +   K
Sbjct: 330 DILASMTEGFSGAEIKNVCTEAGYIAIRNGRK 361

---

>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding
           protein homolog SATA)
          Length = 439

 Score = 82.8 bits (203), Expect = 6e-16
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           F  A+   P +IF DELD++   R  S  +G   + R + +LL ++DG   N+Q + +I 
Sbjct: 272 FALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQ-VKVIA 330

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNR D+LD ALLR GR D+ +   +  E + R RI++  +RK  +  +V+   +A+ C 
Sbjct: 331 ATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMNVSPDVNYEELAR-CT 388

Query: 401 PNFTGADIYALCADAWFHAAKRSVKTL 481
            +F GA   A+C +A   A +R    L
Sbjct: 389 DDFNGAQCKAVCVEAGMIALRRGATEL 415

---

>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Proteasome subunit P50)
          Length = 439

 Score = 82.8 bits (203), Expect = 6e-16
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           F  A+   P +IF DELD++   R  S  +G   + R + +LL ++DG   N+Q + +I 
Sbjct: 272 FALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQ-VKVIA 330

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNR D+LD ALLR GR D+ +   +  E + R RI++  +RK  +  +V+   +A+ C 
Sbjct: 331 ATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMNVSPDVNYEELAR-CT 388

Query: 401 PNFTGADIYALCADAWFHAAKRSVKTL 481
            +F GA   A+C +A   A +R    L
Sbjct: 389 DDFNGAQCKAVCVEAGMIALRRGATEL 415

---

>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)|
           (CIM3 protein) (TAT-binding protein TBY1)
          Length = 405

 Score = 82.8 bits (203), Expect = 6e-16
 Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 1/147 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSG-GVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F  AR   P +IF DE+DS+   R   +  G   + R + +LL ++DG  + S+
Sbjct: 228 RMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGF-ETSK 286

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ II ATNR D+LD ALLRPGR D+ +     + A+ R  IL+  +RK  L   ++L  
Sbjct: 287 NIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAA-RAEILRIHSRKMNLTRGINLRK 345

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAK 463
           +A+      +GAD+  +C +A  +A +
Sbjct: 346 VAEKM-NGCSGADVKGVCTEAGMYALR 371

---

>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 429

 Score = 82.8 bits (203), Expect = 6e-16
 Identities = 50/142 (35%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           F+ A+   PC+IF DE+D++   R  S  SG   + R + +LL ++DG S + + + +I 
Sbjct: 262 FQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDER-IKVIA 320

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNR D+LD AL+R GR D+ +     +E + R RIL+  +RK  ++ +V+   +A+   
Sbjct: 321 ATNRADILDPALMRSGRLDRKIEFPHPSEEA-RARILQIHSRKMNVNPDVNFEELAR-ST 378

Query: 401 PNFTGADIYALCADAWFHAAKR 466
            +F GA + A+C +A   A +R
Sbjct: 379 DDFNGAQLKAVCVEAGMLALRR 400

---

>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score = 82.4 bits (202), Expect = 8e-16
 Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDR--VVSQLLVEIDGLSDNSQDLFI 214
           +F+ AR   P ++F DE+D++  AR     SG   +R   ++Q+LVE+DG +  +  + +
Sbjct: 432 LFKTARENAPSIVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTP-ADHVVV 490

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKL-HENVSLLSIAQ 391
           +  TNRPD+LD ALLRPGRFD+ + I    E   R+ I        KL  E   L +   
Sbjct: 491 LAGTNRPDILDKALLRPGRFDRHINID-KPELEGRKAIFAVHLHHLKLAGEIFDLKNRLA 549

Query: 392 HCPPNFTGADIYALCADAWFHAAK 463
              P F+GADI  +C +A   AA+
Sbjct: 550 ALTPGFSGADIANVCNEAALIAAR 573

---

>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 82.4 bits (202), Expect = 8e-16
 Identities = 48/122 (39%), Positives = 79/122 (64%), Gaps = 3/122 (2%)
 Frame = +2

Query: 146 DRVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRER 325
           ++ ++Q+LVE+DG S N   + +I ATNRPD+LD AL RPGRFD+ + +G+  +   RE+
Sbjct: 17  EQTLNQMLVEMDGFSGND-GVIVIAATNRPDVLDPALTRPGRFDRQVVVGL-PDVKGREQ 74

Query: 326 ILKAQTRKYKLHENVSLLSIAQHCPPNFTGADIYALCADAWFHAA---KRSVKTLEADPS 496
           ILK   RK  + ++V  +++A+   P ++GAD+  L  +A   AA   KR+V  LE + +
Sbjct: 75  ILKVHMRKVSVAQDVDAMTLARG-TPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKA 133

Query: 497 RN 502
           ++
Sbjct: 134 KD 135

---

>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1)
          Length = 442

 Score = 82.4 bits (202), Expect = 8e-16
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           F  A+   P +IF DELD++   R  S  +G   + R + +LL ++DG   N+Q + +I 
Sbjct: 275 FALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQ-VKVIA 333

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNR D+LD ALLR GR D+ +   +  E + R RI++  +RK  +  +V+   +A+ C 
Sbjct: 334 ATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMNVSPDVNYEELAR-CT 391

Query: 401 PNFTGADIYALCADAWFHAAKRSVKTL 481
            +F GA   A+C +A   A +R    L
Sbjct: 392 DDFNGAQSKAVCVEAGMIALRRGATEL 418

---

>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 419

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 51/142 (35%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           F  A+   PC+IF DE+D++   R  S  SG   + R + +LL ++DG S + + + +I 
Sbjct: 252 FLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR-IKVIA 310

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNR D+LD AL+R GR D+ +     TE + R RIL+  +RK  ++ +V+   +A+   
Sbjct: 311 ATNRADILDPALMRSGRLDRKIEFPHPTEEA-RGRILQIHSRKMNVNADVNFEELAR-ST 368

Query: 401 PNFTGADIYALCADAWFHAAKR 466
            +F GA + A+C +A   A +R
Sbjct: 369 DDFNGAQLKAVCVEAGMLALRR 390

---

>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Fragment)
          Length = 486

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 58/175 (33%), Positives = 95/175 (54%), Gaps = 6/175 (3%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL------SDNSQ 202
           +FE AR   P  IF DE+DS+   RG+S +      RV ++LLV++DG+       D S+
Sbjct: 290 LFEMARFYAPTTIFIDEIDSICSRRGTS-EEHEASRRVKAELLVQMDGVGGASENEDPSK 348

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
            + ++ ATN P  +D AL R  R +K +YI +   A  RE +L+   ++ +L ++V++  
Sbjct: 349 MVMVLAATNFPWDIDEALRR--RLEKRIYIPL-PSAKGREELLRINLKELELADDVNIEC 405

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETEDF 547
           IA++    ++GADI  +C DA   A +R ++ L  +  RN       +    EDF
Sbjct: 406 IAENM-DGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRDDMHMPTTMEDF 459

---

>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding|
           protein homolog)
          Length = 414

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGG--VMDRVVSQLLVEIDGLSDNS 199
           +M   +F  AR   P +IF DE+DS+   R      GG   + R + +LL ++DG  +++
Sbjct: 236 KMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGF-EST 294

Query: 200 QDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLL 379
           Q++ II ATNR D+LD ALLRPGR D+ +    N     R  ILK  +R+  L   ++L 
Sbjct: 295 QNIKIIMATNRIDILDPALLRPGRIDRKIEF-PNPNELARLDILKIHSRRMNLTRGINLR 353

Query: 380 SIAQHCPPNFTGADIYALCADA-WFHAAKRSVKTLEAD 490
            IA       +GA+I A C +A  F   +R V   + D
Sbjct: 354 KIASML-GGASGAEIKATCTEAGMFALRERRVHVTQED 390

---

>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 662

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 50/143 (34%), Positives = 79/143 (55%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           +F  A+   PC++F DE+DS+   R  S       ++ ++QLL E+DG   + + + ++G
Sbjct: 250 LFTTAKQNSPCLVFIDEIDSVGGNRTFSPHHP-FANQTINQLLAEMDGFQ-SKEGIIVLG 307

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATN+ ++LD ALLRPGRFD  +++   T    R  +L    +K K   N+ +  +A H  
Sbjct: 308 ATNQAEVLDKALLRPGRFDVQIHVSPPTYEG-RIALLNLYLKKVKTGSNIDIEKLA-HGT 365

Query: 401 PNFTGADIYALCADAWFHAAKRS 469
             +TGADI  L   A   AA R+
Sbjct: 366 VGYTGADIQNLVNQAAIAAALRN 388

---

>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR---GSSADSGGVMDRVVSQLLVEIDGLSDN 196
           R+   +F  AR  +PC+IF DE+D++   R   G+SAD    + R + +LL ++DG  D 
Sbjct: 213 RLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADRE--IQRTLMELLNQMDGF-DT 269

Query: 197 SQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSL 376
              + +I ATNRPD LD ALLRPGR D+ ++I +  E + R  ILK        H  +  
Sbjct: 270 LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEIDY 328

Query: 377 LSIAQHCPPNFTGADIYALCADAWFHAAK 463
            +I +     F GAD+  +C +A   A +
Sbjct: 329 EAIVK-LSDGFNGADLRNVCTEAGMFAIR 356

---

>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR---GSSADSGGVMDRVVSQLLVEIDGLSDN 196
           R+   +F  AR  +PC+IF DE+D++   R   G+SAD    + R + +LL ++DG  D 
Sbjct: 213 RLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADRE--IQRTLMELLNQMDGF-DT 269

Query: 197 SQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSL 376
              + +I ATNRPD LD ALLRPGR D+ ++I +  E + R  ILK        H  +  
Sbjct: 270 LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEIDY 328

Query: 377 LSIAQHCPPNFTGADIYALCADAWFHAAK 463
            +I +     F GAD+  +C +A   A +
Sbjct: 329 EAIVK-LSDGFNGADLRNVCTEAGMFAIR 356

---

>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR---GSSADSGGVMDRVVSQLLVEIDGLSDN 196
           R+   +F  AR  +PC+IF DE+D++   R   G+SAD    + R + +LL ++DG  D 
Sbjct: 213 RLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADRE--IQRTLMELLNQMDGF-DT 269

Query: 197 SQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSL 376
              + +I ATNRPD LD ALLRPGR D+ ++I +  E + R  ILK        H  +  
Sbjct: 270 LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEIDY 328

Query: 377 LSIAQHCPPNFTGADIYALCADAWFHAAK 463
            +I +     F GAD+  +C +A   A +
Sbjct: 329 EAIVK-LSDGFNGADLRNVCTEAGMFAIR 356

---

>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein|
           10) (TBP-10)
          Length = 404

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 1/147 (0%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           F  A+   P +IF DELD++   R  S  +G   + R + +LL ++DG    +Q + +I 
Sbjct: 237 FSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQ-VKVIA 295

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNR D+LD ALLR GR D+ +   +  E + R RI++  +RK  +  +V+   +A+ C 
Sbjct: 296 ATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMNVSPDVNYEELAR-CT 353

Query: 401 PNFTGADIYALCADAWFHAAKRSVKTL 481
            +F GA   A+C +A   A +R    L
Sbjct: 354 DDFNGAQCKAVCVEAGIIALRRGATEL 380

---

>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 54/160 (33%), Positives = 92/160 (57%), Gaps = 6/160 (3%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLS------DNSQ 202
           +FE AR   P  IF DE+DS+   RG+ ++      RV S+LL+++DG+S      ++S+
Sbjct: 318 LFEMARFYAPSTIFIDEIDSICSKRGTGSEH-EASRRVKSELLIQMDGVSGPSAGEESSK 376

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
            + ++ ATN P  +D AL R  R +K +YI +  E   RE++L+   ++  L +++ L S
Sbjct: 377 MVMVLAATNFPWDIDEALRR--RLEKRIYIPL-PEIDGREQLLRINLKEVPLADDIDLKS 433

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRN 502
           IA+     ++GADI  +C DA   A +R ++ L  +  R+
Sbjct: 434 IAEKM-DGYSGADITNVCRDASMMAMRRRIQGLRPEEIRH 472

---

>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 490

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 6/159 (3%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL------SDNSQ 202
           +FE AR   P  IF DE+DS+   RG+S D      RV S+LL+++DG+       D S+
Sbjct: 292 LFEMARFYAPTTIFIDEIDSICSRRGTS-DEHEASRRVKSELLIQMDGVGGALENDDPSK 350

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
            + ++ ATN P  +D AL R  R +K +YI + T A  R  +LK   R+ +L  ++ L  
Sbjct: 351 MVMVLAATNFPWDIDEALRR--RLEKRIYIPLPT-AKGRAELLKINLREVELDPDIQLED 407

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSR 499
           IA+     ++GADI  +C DA   A +R +  L  +  R
Sbjct: 408 IAEKI-EGYSGADITNVCRDASLMAMRRRINGLSPEEIR 445

---

>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 6/159 (3%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL------SDNSQ 202
           +FE AR   P  IF DE+DS+   RG+S D      RV S+LL+++DG+       D S+
Sbjct: 290 LFEMARFYAPTTIFIDEIDSICSRRGTS-DEHEASRRVKSELLIQMDGVGGALENDDPSK 348

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
            + ++ ATN P  +D AL R  R +K +YI + T A  R  +LK   R+ +L  ++ L  
Sbjct: 349 MVMVLAATNFPWDIDEALRR--RLEKRIYIPLPT-AKGRAELLKISLREVELDPDIHLED 405

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSR 499
           IA+     ++GADI  +C DA   A +R +  L  +  R
Sbjct: 406 IAEK-TEGYSGADITNICRDASLMAMRRRINGLSPEEIR 443

---

>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)|
          Length = 403

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 54/158 (34%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGG--VMDRVVSQLLVEIDGLSDNS 199
           RM   +F  AR   P +IF DE+DS+  +R  S+   G   + R + +LL ++DG  + +
Sbjct: 225 RMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGF-EAT 283

Query: 200 QDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLL 379
           +++ +I ATNR D+LD ALLRPGR D+ +       A  R  IL+  +R   L   + L 
Sbjct: 284 KNIKVIMATNRIDILDPALLRPGRIDRKIEF-PPPSAEARAEILRIHSRSMNLTRGIDLK 342

Query: 380 SIAQHCPPNFTGADIYALCADA-WFHAAKRSVKTLEAD 490
           SIA+      +GA++  +C +A  F   +R V   + D
Sbjct: 343 SIAEKM-NGASGAELKGVCTEAGMFALRERRVHVTQED 379

---

>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)|
          Length = 448

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMD--RVVSQLLVEIDGLSDNS 199
           R+   +F  A    P ++F DE+D++   R   A SG   +  R + +LL ++DG   + 
Sbjct: 271 RLVRQLFNAAEEHSPSIVFIDEIDAIGTKR-YDAQSGAEREIQRTMLELLNQLDGFDTSQ 329

Query: 200 QDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLL 379
           +D+ +I ATNR   LD AL+RPGR D+ + +  N + + + +I    T K  L E+V+L 
Sbjct: 330 RDIKVIMATNRISDLDPALIRPGRIDRKI-LFENPDEATKRKIFTIHTSKMNLGEDVNLE 388

Query: 380 SIAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDAGAEEVIVETED 544
            + Q C  + +GA+I A+ ++A   A +     +  D  R     A E +++T+D
Sbjct: 389 ELIQ-CKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQ----AREKVLKTKD 438

---

>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding|
           homolog 5)
          Length = 437

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 51/142 (35%), Positives = 84/142 (59%), Gaps = 2/142 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMD--RVVSQLLVEIDGLSDNS 199
           R+   IF+ A    P ++F DE+D++   R  S +SGG  +  R + +LL ++DG  D  
Sbjct: 262 RLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGFDDRG 320

Query: 200 QDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLL 379
            D+ +I ATN+ + LD AL+RPGR D+ + +  N + S +++IL   T K  L E+V+L 
Sbjct: 321 -DVKVIMATNKIETLDPALIRPGRIDRKI-LFENPDLSTKKKILGIHTSKMNLSEDVNLE 378

Query: 380 SIAQHCPPNFTGADIYALCADA 445
           ++      + +GADI A+C +A
Sbjct: 379 TLVT-TKDDLSGADIQAMCTEA 399

---

>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)|
           (Proteasomal cap subunit)
          Length = 437

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 58/149 (38%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR---GSSADSGGVMDRVVSQLLVEIDGLSDN 196
           R+   +F  A+   PC+IF DE+D++   R   G+SAD    + R + +LL ++DG  DN
Sbjct: 261 RIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADRE--IQRTLMELLTQMDGF-DN 317

Query: 197 SQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSL 376
                II ATNRPD LD ALLRPGR D+ + I +  EA  R  I K  T K K       
Sbjct: 318 LGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAG-RLEIFKIHTAKVKKTGEFD- 375

Query: 377 LSIAQHCPPNFTGADIYALCADAWFHAAK 463
              A      F GADI     +A F A +
Sbjct: 376 FEAAVKMSDGFNGADIRNCATEAGFFAIR 404

---

>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 6/159 (3%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL------SDNSQ 202
           +FE AR   P  IF DE+DS+   RG+S D      RV S+LL+++DG+       D S+
Sbjct: 290 LFEMARFYAPTTIFIDEIDSICSRRGTS-DEHEASRRVKSELLIQMDGVGGALENDDPSK 348

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
            + ++ ATN P  +D AL R  R +K +YI + T A  R  +LK   R+ +L  +V L  
Sbjct: 349 MVMVLAATNFPWDIDEALRR--RLEKRIYIPLPT-AKGRAELLKISLREVELDPDVHLED 405

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSR 499
           IA      ++GADI  +C DA   A +R +  L  +  R
Sbjct: 406 IADK-TEGYSGADITNICRDASLMAMRRRINGLSPEEIR 443

---

>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome|
           AAA-ATPase subunit RPT3) (Regulatory particle triple-A
           ATPase subunit 3)
          Length = 408

 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F  A+   P +IF DE+D++A AR  +   +   + R++ +LL ++DG  D + 
Sbjct: 235 RMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF-DQTV 293

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNR D LD ALLRPGR D+ +   +  +   +  + +  T K  L + V L  
Sbjct: 294 NVKVIMATNRADTLDPALLRPGRLDRKIEFPL-PDRRQKRLVFQVCTSKMNLSDEVDLED 352

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRS 469
                P   + A+I A+C +A  HA +++
Sbjct: 353 YVSR-PDKISAAEIAAICQEAGMHAVRKN 380

---

>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding|
           protein homolog 2)
          Length = 403

 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQ 202
           R+   +F  AR   P +IF DE+D++A  R  +   +   + R++ +LL ++DG  D S 
Sbjct: 230 RLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGF-DVSV 288

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNR D LD ALLRPGR D+ +   +  +   +  I +  T K  L + V L  
Sbjct: 289 NVKVIMATNRQDTLDPALLRPGRLDRKIEFPL-PDRRQKRLIFQVITSKMNLSDEVDLED 347

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRS 469
                P   +GA+I ++C +A  HA +++
Sbjct: 348 YVSR-PDKLSGAEIQSICQEAGMHAIRKN 375

---

>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)|
          Length = 415

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F  A+   P +IF DE+D++A  R  +   +   + R++ +LL ++DG  D + 
Sbjct: 242 RMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF-DQTT 300

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNR D LD ALLRPGR D+ +   +  +   +  I    T K  L E V L  
Sbjct: 301 NVKVIMATNRADTLDPALLRPGRLDRKIEFPL-PDRRQKRLIFSTITAKMNLSEEVDLEE 359

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRS 469
                P   +GADI A+C +A  +A + +
Sbjct: 360 FVAR-PDRVSGADINAICQEAGMNAVREN 387

---

>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog|
          Length = 413

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F  A+   P +IF DE+D++A AR  +   +   + R++ +LL ++DG  D + 
Sbjct: 240 RMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF-DQTV 298

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNR D LD ALLRPGR D+ +   +  +   +  + +  T K  L + V L  
Sbjct: 299 NVKVIMATNRADTLDPALLRPGRLDRKIEFPL-PDRRQKRLVFQVCTAKMNLGDEVDLED 357

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRS 469
                P   + A+I A+C +A  HA +++
Sbjct: 358 YVSR-PDKISAAEITAICQEAGMHAVRKN 385

---

>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 54/140 (38%), Positives = 77/140 (55%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           +F +A++  PCVIF DELDS+   R  S        + ++QLL E+DG   N + + IIG
Sbjct: 423 LFREAKANAPCVIFIDELDSVGGKRIESP-MHPYSRQTINQLLAEMDGFKPN-EGVIIIG 480

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATN P+ LD+AL+RPGRFD  + +    +   R  ILK    K K  ++V    IA+   
Sbjct: 481 ATNFPEALDNALIRPGRFDMQVTV-PRPDVKGRTEILKWYLNKIKFDQSVDPEIIARG-T 538

Query: 401 PNFTGADIYALCADAWFHAA 460
             F+GA++  L   A   AA
Sbjct: 539 VGFSGAELENLVNQAALKAA 558

---

>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog|
          Length = 387

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 1/149 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F  AR   P ++F DE+DS+A  R  +S  +   + RV+ +LL ++DG  D + 
Sbjct: 214 RMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSADREVQRVLIELLNQMDGF-DPAA 272

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNR D +D ALLRPGR D+ +   +  +   +  +  A T K  L+++V + S
Sbjct: 273 NVKVIMATNRADTIDPALLRPGRLDRKIEFPL-PDRRQKRLVFNAITSKMSLNDSVDIES 331

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRS 469
           +    P   + ADI ++C +A   A + S
Sbjct: 332 LVCR-PEKISCADINSICQEAGMLAVRAS 359

---

>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 54/140 (38%), Positives = 77/140 (55%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           +F +A++  PCVIF DELDS+   R  S        + ++QLL E+DG   N + + IIG
Sbjct: 365 LFREAKANAPCVIFIDELDSVGGKRIESP-MHPYSRQTINQLLAEMDGFKPN-EGVIIIG 422

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATN P+ LD+AL+RPGRFD  + +    +   R  ILK    K K  ++V    IA+   
Sbjct: 423 ATNFPEALDNALIRPGRFDMQVTV-PRPDVKGRTEILKWYLNKIKFDKSVDPEIIARG-T 480

Query: 401 PNFTGADIYALCADAWFHAA 460
             F+GA++  L   A   AA
Sbjct: 481 VGFSGAELENLVNQAALKAA 500

---

>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding|
           protein homolog 2)
          Length = 448

 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 55/153 (35%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMD--RVVSQLLVEIDGLSDNSQDLFI 214
           +F  A    P ++F DE+D++   R   A SGG  +  R + +LL ++DG  D+  D+ +
Sbjct: 278 LFRVADELSPSIVFIDEIDAVGTKR-YDAHSGGEREIQRTMLELLNQLDGF-DSRGDVKV 335

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
           I ATNR + LD ALLRPGR D+ +   +  +   R RI +  T K  L ++V+L      
Sbjct: 336 ILATNRIESLDPALLRPGRIDRKIEFPL-PDIKTRRRIFQIHTSKMTLADDVNLEEFVM- 393

Query: 395 CPPNFTGADIYALCADAWFHAAK-RSVKTLEAD 490
               F+GADI A+C +A   A + R +K   AD
Sbjct: 394 TKDEFSGADIKAICTEAGLLALRERRMKVTHAD 426

---

>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog|
          Length = 389

 Score = 76.3 bits (186), Expect = 5e-14
 Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F  AR   P +IF DE+D++A  R  +   +   + R++ +LL ++DG  D   
Sbjct: 214 RMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGF-DQGA 272

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNR D LD ALLRPGR D+ +      +   R  + +  T K  L   V L +
Sbjct: 273 NVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDT 332

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRS 469
                P   +GA I A+  DA   A ++S
Sbjct: 333 FIMR-PDASSGAQIAAIMQDAGLLAVRKS 360

---

>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)|
          Length = 439

 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 3/160 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMD--RVVSQLLVEIDGLSDNSQDLFI 214
           +F  A    P ++F DE+D++   R  S +SGG  +  R + +LL ++DG  D+  D+ +
Sbjct: 269 LFRVAEEHAPSIVFIDEIDAVGTKRYDS-NSGGEREIQRTMLELLNQLDGF-DSRGDVKV 326

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
           I ATNR + LD AL+RPGR D+ +   +  E + R RI    T +  L E+V+L  +   
Sbjct: 327 IMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKR-RIFTIHTSRMTLAEDVNLSELIM- 384

Query: 395 CPPNFTGADIYALCADAWFHAAK-RSVKTLEADPSRNNDA 511
              + +GADI A+C +A   A + R +K    D  ++ ++
Sbjct: 385 AKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKES 424

---

>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 51/159 (32%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMD--RVVSQLLVEIDGLSDNSQDLFI 214
           +F  A    P ++F DE+D++   R  S +SGG  +  R + +LL ++DG  D+  D+ +
Sbjct: 270 LFRVAEEHAPSIVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGF-DSRGDVKV 327

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
           I ATNR + LD AL+RPGR D+ +   +  E + ++RI +  T +  L ++V+L  +   
Sbjct: 328 IMATNRIETLDPALIRPGRIDRKIEFPLPDEKT-KKRIFQIHTSRMTLADDVTLDDLIM- 385

Query: 395 CPPNFTGADIYALCADAWFHAAK-RSVKTLEADPSRNND 508
              + +GADI A+C +A   A + R +K    D  ++ +
Sbjct: 386 AKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 424

---

>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 51/159 (32%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMD--RVVSQLLVEIDGLSDNSQDLFI 214
           +F  A    P ++F DE+D++   R  S +SGG  +  R + +LL ++DG  D+  D+ +
Sbjct: 270 LFRVAEEHAPSIVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGF-DSRGDVKV 327

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
           I ATNR + LD AL+RPGR D+ +   +  E + ++RI +  T +  L ++V+L  +   
Sbjct: 328 IMATNRIETLDPALIRPGRIDRKIEFPLPDEKT-KKRIFQIHTSRMTLADDVTLDDLIM- 385

Query: 395 CPPNFTGADIYALCADAWFHAAK-RSVKTLEADPSRNND 508
              + +GADI A+C +A   A + R +K    D  ++ +
Sbjct: 386 AKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 424

---

>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 51/159 (32%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMD--RVVSQLLVEIDGLSDNSQDLFI 214
           +F  A    P ++F DE+D++   R  S +SGG  +  R + +LL ++DG  D+  D+ +
Sbjct: 270 LFRVAEEHAPSIVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGF-DSRGDVKV 327

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
           I ATNR + LD AL+RPGR D+ +   +  E + ++RI +  T +  L ++V+L  +   
Sbjct: 328 IMATNRIETLDPALIRPGRIDRKIEFPLPDEKT-KKRIFQIHTSRMTLADDVTLDDLIM- 385

Query: 395 CPPNFTGADIYALCADAWFHAAK-RSVKTLEADPSRNND 508
              + +GADI A+C +A   A + R +K    D  ++ +
Sbjct: 386 AKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 424

---

>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 53/140 (37%), Positives = 75/140 (53%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           +F +A++  PCVIF DELDS+   R           + + QLL E+DG   N + + IIG
Sbjct: 365 LFREAKANAPCVIFIDELDSVGGKR-IEFPMHPYSRQTIIQLLAEMDGFKPN-EGVIIIG 422

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATN P+ LD+AL+RPGRFD  + +    +   R  ILK    K K  ++V    IA+   
Sbjct: 423 ATNFPEALDNALIRPGRFDMQVTV-PRPDVKGRTEILKWYLNKIKFDKSVDPEIIARG-T 480

Query: 401 PNFTGADIYALCADAWFHAA 460
             F+GA++  L   A   AA
Sbjct: 481 VGFSGAELENLVNQAALKAA 500

---

>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)|
           (TBP-7)
          Length = 418

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F  A+   P +IF DE+D++A  R  +   +   + R++ +LL ++DG  D + 
Sbjct: 245 RMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF-DQNV 303

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNR D LD ALLRPGR D+ +   +  +   +  I    T K  L E V L  
Sbjct: 304 NVKVIMATNRADTLDPALLRPGRLDRKIEFPL-PDRRQKRLIFSTITSKMNLSEEVDLED 362

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRS 469
                P   +GADI ++C ++   A + +
Sbjct: 363 YVAR-PDKISGADINSICQESGMLAVREN 390

---

>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7)
          Length = 418

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F  A+   P +IF DE+D++A  R  +   +   + R++ +LL ++DG  D + 
Sbjct: 245 RMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF-DQNV 303

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNR D LD ALLRPGR D+ +   +  +   +  I    T K  L E V L  
Sbjct: 304 NVKVIMATNRADTLDPALLRPGRLDRKIEFPL-PDRRQKRLIFSTITSKMNLSEEVDLED 362

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRS 469
                P   +GADI ++C ++   A + +
Sbjct: 363 YVAR-PDKISGADINSICQESGMLAVREN 390

---

>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 51/159 (32%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMD--RVVSQLLVEIDGLSDNSQDLFI 214
           +F  A    P ++F DE+D++   R  S +SGG  +  R + +LL ++DG  D+  D+ +
Sbjct: 270 LFRVAEEHGPSIVFIDEIDAIGTKRYDS-NSGGEREIQRTMLELLNQLDGF-DSRGDVKV 327

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
           I ATNR + LD AL+RPGR D+ +   +  E + ++RI +  T +  L ++V+L  +   
Sbjct: 328 IMATNRIETLDPALIRPGRIDRKIEFPLPDEKT-KKRIFQIHTSRMTLADDVTLDELIM- 385

Query: 395 CPPNFTGADIYALCADAWFHAAK-RSVKTLEADPSRNND 508
              + +GADI A+C +A   A + R +K    D  ++ +
Sbjct: 386 AKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 424

---

>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B|
          Length = 414

 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F  A+   P +IF DE+D++A  R  +   +   + R++ +LL ++DG  D S 
Sbjct: 241 RMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF-DQST 299

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNR D LD ALLRPGR D+ +   +  +   +  +      +  L ++V L  
Sbjct: 300 NVKVIMATNRQDTLDPALLRPGRLDRKIEFPL-PDRRQKRLVFSTVCSRMNLSDDVDLED 358

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRS 469
                P   +GADI ++C +A   A + +
Sbjct: 359 WVAR-PDKISGADINSICQEAGMQAVREN 386

---

>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7) (CIP21)
          Length = 418

 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F  A+   P +IF DE+D++A  R  +   +   + R++ +LL ++DG  D + 
Sbjct: 245 RMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF-DQNV 303

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNR D LD ALLRPGR D+ +   +  +   +  I    T K  L E V L  
Sbjct: 304 NVKVIMATNRADTLDPALLRPGRLDRKIEFPL-PDRRQKRLIFSTITSKMNLSEEVDLED 362

Query: 383 IAQHCPPNFTGADIYALC 436
                P   +GADI ++C
Sbjct: 363 YVAR-PDKISGADINSIC 379

---

>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog|
          Length = 423

 Score = 72.4 bits (176), Expect = 8e-13
 Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F  AR   P +IF DE+D++A  R  +   +   + R++ +LL ++DG  + S 
Sbjct: 246 RMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF-EQSS 304

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNR D LD ALLRPGR D+ +      +   R  I      K  L   V L S
Sbjct: 305 NVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDS 364

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRS 469
           +     P  +GA I A+  +A   A +++
Sbjct: 365 LIVRNEP-LSGAVIAAIMQEAGLRAVRKN 392

---

>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 53/149 (35%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR---GSSADSGGVMDRVVSQLLVEIDGLSDN 196
           R+   +F  A+   PCVIF DE+D++   R   G+SAD    + R + +LL ++DG    
Sbjct: 212 RIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADRE--IQRTLMELLNQMDGFDYL 269

Query: 197 SQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSL 376
            Q   I+ ATNRPD LD ALLRPGR D+ + I +  E   R  ILK    K      +  
Sbjct: 270 GQTKIIM-ATNRPDTLDPALLRPGRLDRKIEIPLPNEVG-RMEILKIHLEKVSKQGEIDY 327

Query: 377 LSIAQHCPPNFTGADIYALCADAWFHAAK 463
            ++ +       GAD+  +  +A F A K
Sbjct: 328 EALVK-LTDGTNGADLRNVVTEAGFIAIK 355

---

>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 37/79 (46%), Positives = 55/79 (69%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           +F+KA++  PC+IF DE+DS+   R S++      ++ ++QLL E+DG + N + + +I 
Sbjct: 285 LFDKAKARAPCIIFIDEIDSVGSKRVSNSIHP-YANQTINQLLSEMDGFTRN-EGIIVIA 342

Query: 221 ATNRPDLLDSALLRPGRFD 277
           ATNR D LD ALLRPGRFD
Sbjct: 343 ATNRVDDLDKALLRPGRFD 361

---

>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein|
           homolog 1) (TBP-1)
          Length = 434

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 47/148 (31%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           F  A+   P +IF DELD++   R  S  SG   + R + +LL ++DG S + + + ++ 
Sbjct: 267 FALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDR-VKVLA 325

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNR D+LD ALLR GR D+ +   + +E S R +IL+  +RK    ++++   +A+   
Sbjct: 326 ATNRVDVLDPALLRSGRLDRKIEFPLPSEDS-RAQILQIHSRKMTTDDDINWQELAR-ST 383

Query: 401 PNFTGADIYALCADAWFHAAKRSVKTLE 484
             F GA + A+  +A   A +    +++
Sbjct: 384 DEFNGAQLKAVTVEAGMIALRNGQSSVK 411

---

>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
 Frame = +2

Query: 23  RRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL-SDNS 199
           ++++  +F  A   +P +IF DE+DS    R SS      M +  +Q +   DGL +D+S
Sbjct: 171 QKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMK--AQFMSLWDGLDTDHS 228

Query: 200 QDLFIIGATNRPDLLDSALLR--PGRFDKLLYIGVNTEA-SYRERILKAQTRKYKLHENV 370
             + ++GATNRP  LDSA++R  P RF       +N  A   RE ILK   +   +  +V
Sbjct: 229 CQVIVMGATNRPQDLDSAIMRRMPTRFH------INQPALKQREAILKLILKNENVDRHV 282

Query: 371 SLLSIAQHCPPNFTGADIYALCADA 445
            LL +AQ     F+G+D+  +C DA
Sbjct: 283 DLLEVAQE-TDGFSGSDLKEMCRDA 306

---

>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
 Frame = +2

Query: 23  RRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL-SDNS 199
           ++++  +F  A   +P +IF DE+DS    R SS      M +  +Q +   DGL +D+S
Sbjct: 171 QKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMK--AQFMSLWDGLDTDHS 228

Query: 200 QDLFIIGATNRPDLLDSALLR--PGRFDKLLYIGVNTEA-SYRERILKAQTRKYKLHENV 370
             + ++GATNRP  LDSA++R  P RF       +N  A   RE ILK   +   +  +V
Sbjct: 229 CQVIVMGATNRPQDLDSAIMRRMPTRFH------INQPALKQREAILKLILKNENVDRHV 282

Query: 371 SLLSIAQHCPPNFTGADIYALCADA 445
            LL +AQ     F+G+D+  +C DA
Sbjct: 283 DLLEVAQE-TDGFSGSDLKEMCRDA 306

---

>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
 Frame = +2

Query: 23  RRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL-SDNS 199
           ++++  +F  A   +P +IF DE+DS    R SS      M +  +Q +   DGL +D+S
Sbjct: 171 QKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMK--AQFMSLWDGLDTDHS 228

Query: 200 QDLFIIGATNRPDLLDSALLR--PGRFDKLLYIGVNTEA-SYRERILKAQTRKYKLHENV 370
             + ++GATNRP  LDSA++R  P RF       +N  A   RE ILK   +   +  +V
Sbjct: 229 CQVIVMGATNRPQDLDSAIMRRMPTRFH------INQPALKQREAILKLILKNENVDRHV 282

Query: 371 SLLSIAQHCPPNFTGADIYALCADA 445
            LL +AQ     F+G+D+  +C DA
Sbjct: 283 DLLEVAQE-TDGFSGSDLKEMCRDA 306

---

>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c|
          Length = 609

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 37/77 (48%), Positives = 52/77 (67%)
 Frame = +2

Query: 47  EKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGAT 226
           EKA    P ++FFDE+DS+   RG+   S  V   VV QLL EIDG+ +  +++ +IGA+
Sbjct: 358 EKASEGTPVIVFFDEMDSIFRTRGTGVSSD-VETTVVPQLLSEIDGV-EGLENVIVIGAS 415

Query: 227 NRPDLLDSALLRPGRFD 277
           NR D++D A+LRPGR D
Sbjct: 416 NREDMIDPAILRPGRLD 432

---

>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175|
          Length = 609

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 37/77 (48%), Positives = 52/77 (67%)
 Frame = +2

Query: 47  EKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGAT 226
           EKA    P ++FFDE+DS+   RG+   S  V   VV QLL EIDG+ +  +++ +IGA+
Sbjct: 358 EKASEGTPVIVFFDEMDSIFRTRGTGVSSD-VETTVVPQLLSEIDGV-EGLENVIVIGAS 415

Query: 227 NRPDLLDSALLRPGRFD 277
           NR D++D A+LRPGR D
Sbjct: 416 NREDMIDPAILRPGRLD 432

---

>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316|
          Length = 609

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 37/77 (48%), Positives = 52/77 (67%)
 Frame = +2

Query: 47  EKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGAT 226
           EKA    P ++FFDE+DS+   RG+   S  V   VV QLL EIDG+ +  +++ +IGA+
Sbjct: 358 EKASEGTPVIVFFDEMDSIFRTRGTGVSSD-VETTVVPQLLSEIDGV-EGLENVIVIGAS 415

Query: 227 NRPDLLDSALLRPGRFD 277
           NR D++D A+LRPGR D
Sbjct: 416 NREDMIDPAILRPGRLD 432

---

>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)|
           (TAT-binding homolog 2)
          Length = 428

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGLSDNSQ 202
           RM   +F  AR   P +IF DE+DS+A  R  +   S   + R++ +LL ++DG  D S 
Sbjct: 252 RMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGF-DQST 310

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
           ++ +I ATNR D LD ALLRPGR D+ +      +   R  I      K  L     L S
Sbjct: 311 NVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDRRERRLIFGTIASKMSLAPEADLDS 370

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRS 469
           +      + +GA I A+  +A   A +++
Sbjct: 371 LIIR-NDSLSGAVIAAIMQEAGLRAVRKN 398

---

>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQD 205
           RM   +F+ AR+  P  IF DE+DSL  +RG S +      RV S+LLV++DG+S+ + +
Sbjct: 318 RMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGEHES-SRRVKSELLVQVDGVSNTATN 376

Query: 206 -------LFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHE 364
                  + ++ ATN P  +D AL R  R +K +YI +  +   R+ ++    R  ++  
Sbjct: 377 EDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIPL-PDFESRKALININLRTVEVAS 433

Query: 365 NVSLLSIAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRN 502
           +V++  +A+     ++G D+  +C DA  +  +R +     D  +N
Sbjct: 434 DVNIEDVARR-TEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKN 478

---

>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4|
          Length = 443

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMD--RVVSQLLVEIDGLSDNS 199
           +M   +F  A    P ++F DE+D++   R  S +SGG  +  R + +LL ++DG  D+ 
Sbjct: 268 KMVRELFRVAEENAPSIVFIDEIDAVGTKRYDS-NSGGEREIQRTMLELLNQLDGF-DSR 325

Query: 200 QDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLL 379
            D+ ++ ATNR + LD AL+RPGR D+ +   +  E + R RI +  T +  L + V+L 
Sbjct: 326 GDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKR-RIFQIHTSRMTLGKEVNLE 384

Query: 380 SIAQHCPPNFTGADIYALCADA 445
                     +GADI A+C +A
Sbjct: 385 EFIT-AKDELSGADIKAMCTEA 405

---

>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A|
          Length = 438

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           F  A+   P +IF DELD++   R  S  +G   + R + +LL ++DG S + + + +I 
Sbjct: 271 FALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDR-VKVIA 329

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNR D LD ALLR GR D+ L   +  E + R  IL+  +RK  + ++++   +A+   
Sbjct: 330 ATNRVDTLDPALLRSGRLDRKLEFPLPNEEA-RVGILRIHSRKMAIDDDINWEELAR-ST 387

Query: 401 PNFTGADIYALCADAWFHAAKR 466
             + GA + ++C +A   A ++
Sbjct: 388 DEYNGAMLKSVCVEAGMIALRQ 409

---

>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein|
           6) (TBP-6)
          Length = 405

 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGG-VMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           F  A+   P +IF DELD++   R  S  +G   + R + +LL ++DG   N Q + +I 
Sbjct: 256 FALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQ-VKVIA 314

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNR D+LD ALLR GR D+ +   +  E + R RI++  +RK  +  +V+   +A+ CP
Sbjct: 315 ATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RARIMQIHSRKMNVSPDVNYEELAR-CP 372

---

>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a|
          Length = 437

 Score = 68.9 bits (167), Expect = 9e-12
 Identities = 44/131 (33%), Positives = 72/131 (54%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           +FE AR  +P +IF DE+DSL  +R  +        R+ ++ LV++ G+ +N+    ++G
Sbjct: 212 LFELARQHKPSIIFIDEVDSLCGSRNENESEAA--RRIKTEFLVQMQGVGNNNDGTLVLG 269

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATN P +LDSA+ R  RF+K +YI +  EA        A+ + ++LH   +        P
Sbjct: 270 ATNIPWVLDSAIRR--RFEKRIYIPLPEEA--------ARAQMFRLHLGST--------P 311

Query: 401 PNFTGADIYAL 433
            N T A+I+ L
Sbjct: 312 HNLTDANIHEL 322

---

>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)|
           (VPS4-1)
          Length = 437

 Score = 68.9 bits (167), Expect = 9e-12
 Identities = 44/131 (33%), Positives = 72/131 (54%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           +FE AR  +P +IF DE+DSL  +R  +        R+ ++ LV++ G+ +N+    ++G
Sbjct: 212 LFELARQHKPSIIFIDEVDSLCGSRNENESEAA--RRIKTEFLVQMQGVGNNNDGTLVLG 269

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATN P +LDSA+ R  RF+K +YI +  EA        A+ + ++LH   +        P
Sbjct: 270 ATNIPWVLDSAIRR--RFEKRIYIPLPEEA--------ARAQMFRLHLGST--------P 311

Query: 401 PNFTGADIYAL 433
            N T A+I+ L
Sbjct: 312 HNLTDANIHEL 322

---

>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)|
           (Katanin ATPase-containing subunit)
          Length = 472

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 46/144 (31%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSD--NSQDLFI 214
           +FE AR   P +IF DE+D+L   RG+S +      RV S+ LV++DG  +  +S+ +F+
Sbjct: 277 LFELARFYAPSIIFIDEIDTLGGQRGNSGEH-EASRRVKSEFLVQMDGSQNKFDSRRVFV 335

Query: 215 IGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQH 394
           + ATN P  LD AL R  RF+K ++I +  +   R+++++         + ++   +A  
Sbjct: 336 LAATNIPWELDEALRR--RFEKRIFIPL-PDIDARKKLIEKSMEGTPKSDEINYDDLAAR 392

Query: 395 CPPNFTGADIYALCADAWFHAAKR 466
               F+GAD+ +LC  A  +  +R
Sbjct: 393 -TEGFSGADVVSLCRTAAINVLRR 415

---

>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A|
          Length = 380

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
 Frame = +2

Query: 23  RRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL--SDN 196
           ++++  +F  A   +PC+IF DE+DS    R S       M  + +Q +   DGL   +N
Sbjct: 174 QKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSMDHEATAM--MKAQFMSLWDGLDTGEN 231

Query: 197 SQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSL 376
           SQ + ++GATNRP  +D+A+LR  R     ++G+   A+ RE IL+       L   ++L
Sbjct: 232 SQ-VMVMGATNRPQDVDAAILR--RMPTAFHVGL-PNAAQREEILRLILSGENLSNAINL 287

Query: 377 LSIAQHCPPNFTGADIYALCADAWFHAAKRSVK 475
             IA      ++G+D+  LC DA  +  +  V+
Sbjct: 288 KEIASQ-SEGYSGSDLKELCRDAAMYRVRDYVR 319

---

>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants|
          Length = 432

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 43/147 (29%), Positives = 71/147 (48%)
 Frame = +2

Query: 26  RMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQD 205
           R+   +FE AR  +P +IF DE+DSL  +R           R+ ++ LV+++G+  +   
Sbjct: 208 RLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEGESESS--RRIKTEFLVQMNGVGKDESG 265

Query: 206 LFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSI 385
           + ++GATN P  LDSA+ R  RF+K +YI +   A  R R+ +    K            
Sbjct: 266 VLVLGATNIPWTLDSAIRR--RFEKRIYIPL-PNAHARARMFELNVGKIPSELTSQDFKE 322

Query: 386 AQHCPPNFTGADIYALCADAWFHAAKR 466
                  ++G+DI  +  DA     +R
Sbjct: 323 LAKMTDGYSGSDISIVVRDAIMEPVRR 349

---

>MSP1_CAEEL (P54815) Protein MSP1 homolog|
          Length = 342

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 46/150 (30%), Positives = 75/150 (50%)
 Frame = +2

Query: 23  RRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQ 202
           ++++  +F  A+  +P +IF DE+DS    R S       M +  +Q +   DG S +  
Sbjct: 162 QKLAAAVFSVAQKFQPTIIFIDEIDSFLRDRQSHDHESTAMMK--AQFMTLWDGFSSSGD 219

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLS 382
            + ++GATNRP  +D+A+LR  R      + V   A  R +IL    R  K++  V+L  
Sbjct: 220 QIIVMGATNRPRDVDAAILR--RMTARFQVPV-PNAKQRSQILNVILRNEKINNTVNLGE 276

Query: 383 IAQHCPPNFTGADIYALCADAWFHAAKRSV 472
           IAQ      +G+D+  +C  A    AK +V
Sbjct: 277 IAQ-AAEGLSGSDLKEVCRLALLARAKATV 305

---

>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)|
          Length = 362

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 47/145 (32%), Positives = 73/145 (50%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           +F  A   +PC+IF DE+DS    R S+     V   + ++ +   DGL +N + + IIG
Sbjct: 177 MFSLANKLQPCIIFIDEIDSFLRERSSTDHE--VTATLKAEFMTLWDGLLNNGR-VMIIG 233

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCP 400
           ATNR + +D A LR  R  K   + +   +  R +IL    +  KL E+   L +     
Sbjct: 234 ATNRINDIDDAFLR--RLPKRFLVSL-PGSDQRYKILSVLLKDTKLDEDEFDLQLIADNT 290

Query: 401 PNFTGADIYALCADAWFHAAKRSVK 475
             F+G+D+  LC +A   AAK  +K
Sbjct: 291 KGFSGSDLKELCREAALDAAKEYIK 315

---

>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQD-LFII 217
           +F  AR  +P +IF DE+DSL   R           R+ ++ L+E DG+     D + ++
Sbjct: 424 LFAVARELQPSIIFIDEVDSLLCERREGEHDAS--RRLKTEFLIEFDGVQSAGDDRVLVM 481

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQ-- 391
           GATNRP  LD A+LR  RF K +Y+ +  E +   R+L  +    K    ++   +AQ  
Sbjct: 482 GATNRPQELDEAVLR--RFIKRVYVSLPNEET---RLLLLKNLLCKQGSPLTQKELAQLA 536

Query: 392 HCPPNFTGADIYALCADAWFHAAK----RSVKTLEADPSRN 502
                ++G+D+ AL  DA     +      VK + A   RN
Sbjct: 537 RMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRN 577

---

>SPAST_HUMAN (Q9UBP0) Spastin|
          Length = 616

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQD-LFII 217
           +F  AR  +P +IF DE+DSL   R           R+ ++ L+E DG+     D + ++
Sbjct: 426 LFAVARELQPSIIFIDEVDSLLCERREGEHDAS--RRLKTEFLIEFDGVQSAGDDRVLVM 483

Query: 218 GATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQ-- 391
           GATNRP  LD A+LR  RF K +Y+ +  E +   R+L  +    K    ++   +AQ  
Sbjct: 484 GATNRPQELDEAVLR--RFIKRVYVSLPNEET---RLLLLKNLLCKQGSPLTQKELAQLA 538

Query: 392 HCPPNFTGADIYALCADAWFHAAK----RSVKTLEADPSRN 502
                ++G+D+ AL  DA     +      VK + A   RN
Sbjct: 539 RMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRN 579

---

>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)|
          Length = 890

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPAR-------------GSSADSGGV------MDRVVSQ 163
           +F++ ++  PC+++ DE+DS+A  R             G S +   +       D V+ Q
Sbjct: 429 LFKQIQNISPCILYIDEIDSIAERREEANKQLEQLKTIGDSIEGSNINIDQKPSDTVLMQ 488

Query: 164 LLVEIDGLSDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRER--ILKA 337
            L+ +DG    + DL IIGATNR + LD A++RPGRFD+ +   V +   + ER  IL+ 
Sbjct: 489 FLIYMDGYKKRN-DLIIIGATNRIETLDDAIMRPGRFDRQI---VFSPPFFEERKDILRI 544

Query: 338 QTRKYKLHENVSLLSIAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNND 508
             R  K   + +  ++         G D+  L  +    +A  S    +  P  N D
Sbjct: 545 FLRNTKALVDDTTKTMMAERSIGLNGCDLRLLADNILLLSALESRNQQKTIPVINED 601

---

>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 7/149 (4%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           +F+ AR  +P +IF DE+DSL  +R  S +      R+ ++ LV++ G+  ++  + ++G
Sbjct: 219 LFQLARENKPSIIFIDEIDSLCGSR--SENESEAARRIKTEFLVQMQGVGVDNDGILVLG 276

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQ--- 391
           ATN P +LDSA+ R  RF+K +YI +            A+   +KLH   +  S+ +   
Sbjct: 277 ATNIPWVLDSAIRR--RFEKRIYIPLPEP--------HARAAMFKLHLGTTQNSLTEADF 326

Query: 392 ----HCPPNFTGADIYALCADAWFHAAKR 466
                    ++GADI  +  DA     ++
Sbjct: 327 RELGRKTDGYSGADISIIVRDALMQPVRK 355

---

>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13|
           protein) (DOA4-independent degradation protein 6)
          Length = 437

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 33/84 (39%), Positives = 54/84 (64%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           +F  AR  +P +IF DE+D+L   RG          R+ ++LLV+++G+ ++SQ + ++G
Sbjct: 217 LFAMARENKPSIIFIDEVDALTGTRGEGESEAS--RRIKTELLVQMNGVGNDSQGVLVLG 274

Query: 221 ATNRPDLLDSALLRPGRFDKLLYI 292
           ATN P  LDSA+ R  RF++ +YI
Sbjct: 275 ATNIPWQLDSAIRR--RFERRIYI 296

---

>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           +F+ AR  +P +IF DE+DSL  +R  S +      R+ ++ LV++ G+  ++  + ++G
Sbjct: 219 LFQLARENKPSIIFIDEIDSLCGSR--SENESEAARRIKTEFLVQMQGVGVDNDGILVLG 276

Query: 221 ATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQ--- 391
           ATN P +LDSA+ R  RF+K +YI +  EA        A+   ++LH   +  S+ +   
Sbjct: 277 ATNIPWVLDSAIRR--RFEKRIYIPL-PEA-------HARAAMFRLHLGSTQNSLTEADF 326

Query: 392 ----HCPPNFTGADIYALCADAWFHAAKR 466
                    ++GADI  +  DA     ++
Sbjct: 327 QELGRKTDGYSGADISIIVRDALMQPVRK 355

---

>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B|
          Length = 362

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
 Frame = +2

Query: 23  RRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGL-SDNS 199
           ++++  +F  A   +P +IF DE+DS    R SS      M +  +Q +   DGL +D +
Sbjct: 175 QKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMK--AQFMSLWDGLDTDYN 232

Query: 200 QDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLL 379
             + I+GATNRP  LDSA+LR  R     +I        R+ ILK       +   V L 
Sbjct: 233 CQVIIMGATNRPQDLDSAILR--RMPTRFHIN-QPNVRQRKDILKLILENENVESAVELS 289

Query: 380 SIAQHCPPNFTGADIYALCADA 445
            IA+     F+G+D+  +C DA
Sbjct: 290 EIAKQ-TDGFSGSDLREMCRDA 310

---

>FTSH_CHLVU (P56369) Cell division protein ftsH homolog|
          Length = 1720

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
 Frame = +2

Query: 152  VVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERIL 331
            ++SQLL+E+DG+   +  + I GATNRP++LD ALLRPGRFDK++ +G+  +   R  IL
Sbjct: 1154 LLSQLLIELDGIQGRN-GVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKK-RVEIL 1211

Query: 332  KAQTRKYKLHENVSLLSIAQHCPPNFTGADIYALCAD----AWFHAAKRSVKTLEADPSR 499
            +   +     + +      +     FT AD+  L  +    A  + +  +++TLE    R
Sbjct: 1212 QFYGQTLGYQKTMPWAYFGER-TVGFTAADLATLMNESALKAILNQSNHTIETLEHGIER 1270

Query: 500  NNDAGAEEVIV 532
               + +E+  V
Sbjct: 1271 LTTSESEKYTV 1281



 Score = 33.5 bits (75), Expect = 0.41
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPAR 115
            +F++AR   PC++F DE+D+L+  R
Sbjct: 1057 VFQEARQLAPCIVFIDEIDTLSSKR 1081

---

>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494|
          Length = 371

 Score = 59.3 bits (142), Expect = 7e-09
 Identities = 40/138 (28%), Positives = 74/138 (53%)
 Frame = +2

Query: 11  VENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLS 190
           V +  +M   ++++A  + PC++F DELD++  +R   +  G V + VV+ LL E+DG+ 
Sbjct: 195 VGDASKMIRELYQRASESAPCIVFIDELDAIGLSREYQSLRGDVSE-VVNALLTELDGIK 253

Query: 191 DNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENV 370
           +N + +  I ATN P +LD A+    RF++ +   +  +   R +I++   +K  L    
Sbjct: 254 EN-EGVVTIAATNNPAMLDPAI--RSRFEEEIEFKLPNDEE-RLKIMELYAKKMPLPVKA 309

Query: 371 SLLSIAQHCPPNFTGADI 424
           +L    +     F+G DI
Sbjct: 310 NLKEFVEK-TKGFSGRDI 326

---

>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)|
          Length = 497

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
 Frame = +2

Query: 14  ENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSD 193
           E++ R+   I + A +  PC+++ DE+D       S  DSG   +RV++     I  LS+
Sbjct: 302 ESESRLRQMI-DVAETLSPCILWIDEMDKAFSNNDSRGDSG-TSNRVLATF---ISWLSE 356

Query: 194 NSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKY-----KL 358
            ++ +F++   N  DLL   ++R GRFD++ ++ +  E   R+ I K   +++     KL
Sbjct: 357 KTKPVFVVATANNVDLLPLEIIRKGRFDEIFFLDL-PELEERKEIFKIHIQEFRPNSWKL 415

Query: 359 HENVSLLSIAQHCPPNFTGADIYALCADAWFHA 457
            +   L  +++    +F+GA+I     +A + A
Sbjct: 416 FDYKKLAQLSE----SFSGAEIRQSIIEAMYQA 444

---

>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL|
          Length = 330

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 47/134 (35%), Positives = 71/134 (52%)
 Frame = +2

Query: 44  FEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGA 223
           FE AR  +PCV+FFDE D+LA  R  S +    + RVV+ LL+ ID +       F+I A
Sbjct: 170 FEFARK-QPCVLFFDEFDALARTRDDSGEH-NELRRVVNSLLLFIDNMQPKG---FLIAA 224

Query: 224 TNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPP 403
           TN    LD+A+ R  RFD++L+     EA+   R LK + +   +  + +  S A     
Sbjct: 225 TNLDRSLDAAIWR--RFDEVLWFD-RPEAAMIGRFLKLKFKNVPVAFDPARNSAALE--- 278

Query: 404 NFTGADIYALCADA 445
            ++ A+I  +C  A
Sbjct: 279 GYSFAEIERVCTQA 292

---

>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 449

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 36/120 (30%), Positives = 59/120 (49%)
 Frame = +2

Query: 74  VIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSA 253
           V+  +++DS    R  S + G   +   S LL  +DG++ +S +  I   TN P+ LD A
Sbjct: 297 VVLLEDVDSAFQGRERSGEVGFHANVTFSGLLNALDGVT-SSDERIIFMTTNHPEKLDPA 355

Query: 254 LLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQHCPPNFTGADIYAL 433
           L+RPGR D   Y+G  T    RE   +      ++ +++S +     CP N + A +  L
Sbjct: 356 LVRPGRVDVKAYLGNATPEQVREMFTRFYGHSPEMADDLSDIV----CPKNTSMASLQGL 411

---

>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 52.4 bits (124), Expect = 8e-07
 Identities = 30/72 (41%), Positives = 45/72 (62%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           ++E A    P VIF DE+D++   R   +  G V + VV+ LL E+DG++ N   +  IG
Sbjct: 208 LYELASKTAPSVIFIDEMDAIGLDRRFQSLRGDVSE-VVNALLTEMDGINQN-WGVVTIG 265

Query: 221 ATNRPDLLDSAL 256
           ATN P+LLD+A+
Sbjct: 266 ATNNPELLDNAI 277

---

>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 30/72 (41%), Positives = 44/72 (61%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIG 220
           ++E A    P VIF DE+D++   R   +  G V + VV+ LL E+DG++ N   +  IG
Sbjct: 208 LYELASKTAPSVIFIDEMDAIGLDRRYQSLRGDVSE-VVNALLTEMDGINQN-WGVVTIG 265

Query: 221 ATNRPDLLDSAL 256
           ATN P+LLD A+
Sbjct: 266 ATNNPELLDKAI 277

---

>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46|
          Length = 506

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 32/101 (31%), Positives = 49/101 (48%)
 Frame = +2

Query: 53  ARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGATNR 232
           A +  PC+++ DE+D        + DSG    RV       I  LS+    +F++   N 
Sbjct: 330 AETISPCILWIDEIDKAFTGSNFNNDSG-TTKRVFGTF---ITWLSEKKSPVFVVATANN 385

Query: 233 PDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYK 355
            D L   LLR GRFD++ +IG+  +   RE I K   +K +
Sbjct: 386 IDSLPPELLRKGRFDEVFFIGL-PDLKERECIFKVHLKKIR 425

---

>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)|
          Length = 754

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
 Frame = +2

Query: 41  IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSD---NSQD-- 205
           +F  A+   P +IF DE+DS+  AR  + +      R+ ++LL++   LS     S+D  
Sbjct: 555 LFYMAKKLSPSIIFIDEIDSMLTARSDNENESS--RRIKTELLIQWSSLSSATAQSEDRN 612

Query: 206 ------LFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERI--LKAQTRKYKLH 361
                 + ++GATN P  +D A  R  RF + LYI +     Y  R+  LK    K K  
Sbjct: 613 NTLDSRVLVLGATNLPWAIDDAARR--RFSRKLYIPL---PDYETRLYHLKRLMAKQKNS 667

Query: 362 ENVSLLSIAQHCPPNFTGADIYALCADA 445
                  +       F+G+D+ +L  +A
Sbjct: 668 LQDLDYELITEMTEGFSGSDLTSLAKEA 695

---

>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)|
          Length = 491

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
 Frame = +2

Query: 53  ARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGATNR 232
           A    PCV++ DE+D       S  DSG    RV       I  LS+ +  +F++   N 
Sbjct: 314 AEGLSPCVLWIDEIDKAFSNLYSQGDSG-TSARVFGTF---ITWLSEKTTPVFVVATANT 369

Query: 233 PDLLDSALLRPGRFDKLLYIGV--NTEASYRERILKAQTRKYKLHENVSLLSIAQHCPPN 406
              L S +LR GRFD++ ++ +  N E     +I  A+ R  K  +N ++  ++  C   
Sbjct: 370 IQNLPSEMLRKGRFDEIFFLDLPNNEERELIFQIHLARIRP-KSWQNYNIKQLSLLC-NK 427

Query: 407 FTGADI 424
           F+GA+I
Sbjct: 428 FSGAEI 433

---

>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1|
          Length = 456

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 23/87 (26%), Positives = 46/87 (52%)
 Frame = +2

Query: 74  VIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSA 253
           ++  +++D+    R  + + G       S LL  +DG++ +S++      TN P+ LD+A
Sbjct: 315 ILLLEDIDAAFNKRSQTGEQGFHSSVTFSGLLNALDGVT-SSEETITFMTTNHPEKLDAA 373

Query: 254 LLRPGRFDKLLYIGVNTEASYRERILK 334
           ++RPGR D  +++G  T     +  +K
Sbjct: 374 IMRPGRIDYKVFVGNATPYQVEKMFMK 400

---

>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)|
          Length = 69

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 23/60 (38%), Positives = 36/60 (60%)
 Frame = +2

Query: 212 IIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHENVSLLSIAQ 391
           ++  TNRPD+LD AL+RPGRF + +Y G       R  I K   R  KL ++++  ++A+
Sbjct: 3   VLAGTNRPDVLDPALMRPGRFHRQIYTG-PPYIKGRSSIFKVHLRPLKLDKSLNKDTLAR 61

---

>YCF2_ANTFO (Q859W7) Protein ycf2|
          Length = 2392

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
 Frame = +2

Query: 11   VENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGSS---ADSGGVMDRVVSQLLVEID 181
            +E+ +R++  I E A+   PC+I+  ++  L   R +    +D   ++  ++     E  
Sbjct: 1704 MESLQRLT-LILELAKKMSPCIIWIQDIHELNVNRSTENVESDPTFLLGILLKYFHTEF- 1761

Query: 182  GLSDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGV 298
             +S +++ + IIG+T+ P  +D AL+ P R DKL+ I +
Sbjct: 1762 -ISKSTKGIIIIGSTHLPRKVDPALISPNRLDKLMNIRI 1799

---

>YCF2_MARPO (P09975) Protein ycf2|
          Length = 2136

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 28/126 (22%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
 Frame = +2

Query: 11   VENQRRMSGXIFEKARSARPCVIFFDELDSLAPAR-GSSADSGGVMDRVVSQLLVEIDGL 187
            +E+ RR++  + + A+   PC+I+   +  L   R   + +S       +     + D  
Sbjct: 1450 IESLRRLNLTL-DFAKKMSPCIIWIQNIHQLNVNRLTQNVESDPTFLLGILLKYFQTDFS 1508

Query: 188  SDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGV-NTEASYRERILKAQTRKYKLHE 364
                 ++ +IG+T+ P  +D AL+ P R DK++ + + N     ++  L  + + ++L E
Sbjct: 1509 KTKKNNIIVIGSTHLPKKVDPALISPNRLDKIINVRLFNISQRKKQFPLLLKKKNFQLKE 1568

Query: 365  NVSLLS 382
            N+  L+
Sbjct: 1569 NLFFLN 1574

---

>YCF2_PHYPA (P61243) Protein ycf2|
          Length = 2259

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
 Frame = +2

Query: 11   VENQRRMSGXIFEKARSARPCVIFFDELDSLAPARGS-SADSGGVMDRVVSQLLVEIDGL 187
            +E+ RR++  I E A    PC+I+   +  L   R + + +S       +     +    
Sbjct: 1602 MESLRRLN-LILELAEKLSPCIIWMPNIHELNVNRSTQNVESDPTFLLGIFLKYFQTGFS 1660

Query: 188  SDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYI 292
              N+ ++ IIG+T+ P  +D AL+ P R D+L+ I
Sbjct: 1661 KKNTNNIIIIGSTHLPKKVDPALISPNRLDRLINI 1695

---

>SAP1_YEAST (P39955) Protein SAP1|
          Length = 897

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSD--------- 193
            +F  A+   P +IF DE+DS+  +R +  ++     R+ ++ LV+   LS          
Sbjct: 689  LFAIAKKLSPSIIFVDEIDSIMGSRNNENENES-SRRIKNEFLVQWSSLSSAAAGSNKSN 747

Query: 194  -NSQD---------LFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQT 343
             N+ D         + ++ ATN P  +D A  R  RF +  YI +  + +   +  K  +
Sbjct: 748  TNNSDTNGDEDDTRVLVLAATNLPWSIDEAARR--RFVRRQYIPLPEDQTRHVQFKKLLS 805

Query: 344  -RKYKLHEN--VSLLSIAQHCPPNFTGADIYALCADA 445
             +K+ L E+    L+ I +     ++G+DI +L  DA
Sbjct: 806  HQKHTLTESDFDELVKITE----GYSGSDITSLAKDA 838

---

>CLPB2_SYNPX (Q7U3T3) Chaperone clpB 2|
          Length = 900

 Score = 35.8 bits (81), Expect = 0.082
 Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
 Frame = +2

Query: 20  QRRMSGXIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDNS 199
           + R+   + E +RS    V+F DEL ++  +  SS D+G ++   +++            
Sbjct: 294 EERLRSVLEEVSRSDSGVVLFIDELHTVVGSDRSSTDAGSLLKPALAR------------ 341

Query: 200 QDLFIIGAT-----NRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILKAQTRKYKLHE 364
            DL  IGAT      R    D AL R  RF ++L    + E S    IL+    +Y+LH 
Sbjct: 342 GDLRCIGATTPEEYRRTVEKDPALNR--RFQQVLIREPDLELSL--EILRGLRERYELHH 397

Query: 365 NVSL 376
            V++
Sbjct: 398 GVTI 401

---

>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 419

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 21/59 (35%), Positives = 32/59 (54%)
 Frame = +2

Query: 158 SQLLVEIDGLSDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRERILK 334
           S LL  +DG++ +++   +   TN  D LD AL+RPGR D   Y+G  T     +  L+
Sbjct: 310 SGLLNALDGVA-STEARIVFMTTNHIDRLDPALIRPGRVDVKQYVGHCTNWQLSQMFLR 367

---

>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)|
          Length = 419

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = +2

Query: 158 SQLLVEIDGLSDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIG 295
           S LL  +DG++ +++   +   TN  D LD AL+RPGR D   Y+G
Sbjct: 310 SGLLNALDGVA-STEARIVFMTTNHVDRLDPALIRPGRVDLKEYVG 354

---

>YCF2_ADICA (Q85B60) Protein ycf2|
          Length = 2104

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 29/139 (20%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
 Frame = +2

Query: 41   IFEKARSARPCVIFFDELDSLAPARGSS---ADSGGVMDRVVSQLLVEIDGLSDNSQDLF 211
            +FE A+   PC ++  ++  L   R  +   AD   ++ +++  +  ++ G SD  +++ 
Sbjct: 1451 VFEIAKEMSPCTLWIQDIHELNICRSYNKLEADPKFLLCQILKSIGHKL-GNSDIRENV- 1508

Query: 212  IIGATNRPDLLDSALLRPGRFDKLL-YIGVNTEASYRERILKAQTRKYKLHENVSLLSIA 388
            +I  T+ P  +D AL+ P R ++L+ +   N     +E  +  + + +++  N +LL   
Sbjct: 1509 VIATTHVPARIDPALVAPNRLNQLINFRRSNGRQRQKELSILLRIKGFEVGANPTLLEST 1568

Query: 389  QHCPPNFTGADIYALCADA 445
                  ++  D+  L  +A
Sbjct: 1569 VSGTAGYSKRDLLLLANEA 1587

---

>TILS_MESFL (Q6F0E4) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 398

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 17/128 (13%)
 Frame = +2

Query: 194 NSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIGVNTEASYRE--------RILKAQTRK 349
           N Q++ I  A NR DL+++ LL+  R   + + G+N  ++Y+E         ILK++  K
Sbjct: 104 NIQNVLI--AHNRNDLVETFLLQQDRKGYVKHYGLNKTSTYKEITIVRPMLNILKSEILK 161

Query: 350 YKLHENVSLLSIAQHCPPNFTGADIYALCADAWFHAAKRSVK---------TLEADPSRN 502
               EN++ +  + +    +    I A  +++ F+  + ++K          LE +   N
Sbjct: 162 SLKEENIAFVIDSTNEDKKYKRNKIRANLSESTFNDFEETIKKLNKKLEIINLEVNWYVN 221

Query: 503 NDAGAEEV 526
           N+  A+E+
Sbjct: 222 NNMSADEL 229

---

>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 418

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = +2

Query: 158 SQLLVEIDGLSDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYIG 295
           S LL  +DG++ +++   +   TN  D LD AL+RPGR D   Y+G
Sbjct: 310 SGLLNALDGVA-STEARIVFMTTNYIDRLDPALIRPGRVDLKEYVG 354

---

>YOBD_SALTI (Q8Z671) UPF0266 membrane protein yobD|
          Length = 152

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGV 298
           D FI+   N P LL  ALLR GR D ++++G+
Sbjct: 22  DQFIMPRRNGPTLLSIALLRRGRIDSVIFVGL 53

---

>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 420

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
 Frame = +2

Query: 74  VIFFDELDS------LAPARGSSADSGGVMDRVV-SQLLVEIDGLSDNSQDLFIIGATNR 232
           +I  +++D+      L P     A  G  M R+  S LL  +DG++ +S+   +   TN 
Sbjct: 278 IILLEDVDAAFVSRELLPTENPLAYQG--MGRLTFSGLLNALDGVA-SSEARIVFMTTNF 334

Query: 233 PDLLDSALLRPGRFDKLLYIG 295
            + LD AL+RPGR D   Y+G
Sbjct: 335 IERLDPALVRPGRVDLKQYVG 355

---

>YOBD_SALTY (Q8ZP01) UPF0266 membrane protein yobD|
          Length = 156

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGV 298
           D FI+   N P LL  ALLR GR D ++++G+
Sbjct: 22  DQFIMPRRNGPTLLSIALLRRGRVDSVIFVGL 53

---

>CLPB_NITEU (Q82SD8) Chaperone clpB|
          Length = 863

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 7/132 (5%)
 Frame = +2

Query: 2   RHEVENQRRMSGXIFEKARSARPCVIFFDELDSLAPA--RGSSADSGGVMDRVVSQLLVE 175
           ++  E + R+   + E A+     ++F DEL ++  A     + D+G ++   +++    
Sbjct: 250 KYRGEFEERLKAVLKELAQDEGRTIVFIDELHTMVGAGKAEGAMDAGNMLKPALAR---- 305

Query: 176 IDGLSDNSQDLFIIGATNRPDL-----LDSALLRPGRFDKLLYIGVNTEASYRERILKAQ 340
                    +L  +GAT   +       D+AL R  RF K+L      EA+    IL+  
Sbjct: 306 --------GELHCVGATTLDEYRKYVEKDAALER--RFQKVLVDEPGVEATI--AILRGL 353

Query: 341 TRKYKLHENVSL 376
             KY+LH  V +
Sbjct: 354 QEKYELHHGVEI 365

---

>TRMB_BURPS (Q63RN0) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)|
           (tRNA(m7G46)-methyltransferase)
          Length = 265

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +2

Query: 332 KAQTRKYKLHENVSLLSIAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDA 511
           KA+  K +L +   +  +A H  P       Y  CA  W + A++ ++ L ADPS  N A
Sbjct: 174 KARHHKRRLIQPPFVAQLAAHLKPG-----AYLHCATDWQNYAEQMLEVLSADPSLENTA 228

---

>TRMB_BURP1 (Q3JPL2) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)|
           (tRNA(m7G46)-methyltransferase)
          Length = 265

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +2

Query: 332 KAQTRKYKLHENVSLLSIAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDA 511
           KA+  K +L +   +  +A H  P       Y  CA  W + A++ ++ L ADPS  N A
Sbjct: 174 KARHHKRRLIQPPFVAQLAAHLKPG-----AYLHCATDWQNYAEQMLEVLSADPSLENTA 228

---

>TRMB_BURMA (Q62HT7) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)|
           (tRNA(m7G46)-methyltransferase)
          Length = 264

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +2

Query: 332 KAQTRKYKLHENVSLLSIAQHCPPNFTGADIYALCADAWFHAAKRSVKTLEADPSRNNDA 511
           KA+  K +L +   +  +A H  P       Y  CA  W + A++ ++ L ADPS  N A
Sbjct: 173 KARHHKRRLIQPPFVAQLAAHLKPG-----AYLHCATDWQNYAEQMLEVLSADPSLENTA 227

---

>CCC1_YEAST (P47818) Protein CCC1|
          Length = 322

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
 Frame = +2

Query: 149 RVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSALLRPGRFDKLL----------YIGV 298
           RV+S L++   GLSD     F + A     L D+ L+  G F +L+          Y+G 
Sbjct: 99  RVISDLII---GLSDGLTVPFALTA-GLSSLGDAKLVITGGFAELISGAISMGLGGYLGA 154

Query: 299 NTEASYRERILKAQTRKYKLHENV---SLLSIAQHCPPNFTGADIYALCAD 442
            +E+ Y    +K + RK+  + N+    +  I     PNF+   I +   D
Sbjct: 155 KSESDYYHAEVKKEKRKFYDNSNLINREIEDILLEINPNFSDETIVSFIKD 205

---

>YOBD_ECOLI (P67601) UPF0266 membrane protein yobD|
          Length = 152

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 203 DLFIIGATNRPDLLDSALLRPGRFDKLLYIGV 298
           D FI+   N P LL   LLR GR D ++++G+
Sbjct: 22  DQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGL 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,861,875
Number of Sequences: 219361
Number of extensions: 1523840
Number of successful extensions: 5831
Number of sequences better than 10.0: 262
Number of HSP's better than 10.0 without gapping: 5151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5374
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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