ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags22g05 |
|---|---|
| Clone Library Name | barley_pub |
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 358 bits (918), Expect = 1e-98 Identities = 186/221 (84%), Positives = 196/221 (88%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 VVLKTSTRQTIFLPV+GLVDPD+LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP Sbjct: 107 VVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 166 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 TEDYNDIGGLEK+IQELVEAIVLPMTHKE+F+KLG+RPPKGVLLYGPPGTGKTLMARACA Sbjct: 167 TEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACA 226 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVS 542 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAF+LAKEKAPCIIFIDEIDAIGTKRFDSEVS Sbjct: 227 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVS 286 Query: 543 GDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 GDR + + E + NRADILDPA Sbjct: 287 GDREVQRTMLELLNQLDGF-SSDERIKVIAATNRADILDPA 326 Score = 47.8 bits (112), Expect = 3e-05 Identities = 23/23 (100%), Positives = 23/23 (100%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLELLNQLDGFSSDERIK Sbjct: 290 EVQRTMLELLNQLDGFSSDERIK 312
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 355 bits (912), Expect = 5e-98 Identities = 186/221 (84%), Positives = 195/221 (88%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 VVLKTSTRQTIFLPVIGLVDP+ LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP Sbjct: 112 VVLKTSTRQTIFLPVIGLVDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 171 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 TEDYNDIGGLEK+IQELVEAIVLPMTHK++FQKLGIRPPKGVLLYGPPGTGKTLMARACA Sbjct: 172 TEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACA 231 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVS 542 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAF+LAKEK+PCIIFIDEIDAIGTKRFDSEVS Sbjct: 232 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 291 Query: 543 GDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 GDR + + E + NRADILDPA Sbjct: 292 GDREVQRTMLELLNQLDGF-SSDERIKVIAATNRADILDPA 331 Score = 47.8 bits (112), Expect = 3e-05 Identities = 23/23 (100%), Positives = 23/23 (100%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLELLNQLDGFSSDERIK Sbjct: 295 EVQRTMLELLNQLDGFSSDERIK 317
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 355 bits (911), Expect = 7e-98 Identities = 184/221 (83%), Positives = 196/221 (88%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 VVLKTSTRQTIFLPV+GLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP Sbjct: 106 VVLKTSTRQTIFLPVVGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 165 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 TEDY+DIGGLEK+IQELVEAIVLPMTH+E+FQKLG+RPPKGVLLYGPPGTGKTLMARACA Sbjct: 166 TEDYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 225 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVS 542 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAF+LAKEK+PCIIFIDEIDAIGTKRFDSEVS Sbjct: 226 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 285 Query: 543 GDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 GDR + + + + NRADILDPA Sbjct: 286 GDREVQRTMLELLNQLDGF-SSDDRIKVIAATNRADILDPA 325 Score = 46.6 bits (109), Expect = 7e-05 Identities = 22/23 (95%), Positives = 23/23 (100%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLELLNQLDGFSSD+RIK Sbjct: 289 EVQRTMLELLNQLDGFSSDDRIK 311
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 355 bits (911), Expect = 7e-98 Identities = 186/221 (84%), Positives = 194/221 (87%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 VVLKTSTRQTIFLPV+GLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP Sbjct: 102 VVLKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 161 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 TEDYNDIGGLEK+IQELVEAIVLPMTHKEQF+KLGIRPPKGVLLYGPPGTGKTLMARACA Sbjct: 162 TEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACA 221 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVS 542 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAF LAKEK+PCIIFIDEIDAIGTKRFDSEVS Sbjct: 222 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVS 281 Query: 543 GDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 GDR + + + + NRADILDPA Sbjct: 282 GDREVQRTMLELLNQLDGF-SSDDRIKVIAATNRADILDPA 321 Score = 46.6 bits (109), Expect = 7e-05 Identities = 22/23 (95%), Positives = 23/23 (100%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLELLNQLDGFSSD+RIK Sbjct: 285 EVQRTMLELLNQLDGFSSDDRIK 307
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 307 bits (786), Expect(2) = 1e-90 Identities = 149/182 (81%), Positives = 169/182 (92%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 V+KTS+RQT+FLP++GLVDPD LKP DLVGVNKDSYLILDTLPSE+DSRVKAMEVDEKPT Sbjct: 118 VVKTSSRQTVFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPT 177 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y+D+GGL+K+I+ELVEAIVLPM ++F+ +GIR PKG L+YGPPGTGKTL+ARACAA Sbjct: 178 ETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAA 237 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 QTNATFLKLA PQLVQM+IG+GAKLVRDAF LAKEKAP IIFIDE+DAIGTKRFDSE SG Sbjct: 238 QTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSG 297 Query: 546 DR 551 DR Sbjct: 298 DR 299 Score = 46.2 bits (108), Expect(2) = 1e-90 Identities = 21/23 (91%), Positives = 23/23 (100%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLELLNQLDGFSSD+R+K Sbjct: 300 EVQRTMLELLNQLDGFSSDDRVK 322
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 304 bits (778), Expect(2) = 1e-89 Identities = 147/182 (80%), Positives = 168/182 (92%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 V+KTSTRQTIFLP+IGLV+P+ L PGDL+GVNKDSYLI+D LPSEYDSRVKAMEVDEKPT Sbjct: 122 VIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPT 181 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y+DIGGL K+I+EL EAIVLPM ++F+KLG++PPKG L++GPPGTGKTL+ARACAA Sbjct: 182 ERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAA 241 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 Q+NATFLKLA PQLVQMFIGDGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +G Sbjct: 242 QSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAG 301 Query: 546 DR 551 DR Sbjct: 302 DR 303 Score = 46.2 bits (108), Expect(2) = 1e-89 Identities = 21/23 (91%), Positives = 23/23 (100%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLELLNQLDGFSSD+R+K Sbjct: 304 EVQRTMLELLNQLDGFSSDDRVK 326
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 320 bits (820), Expect = 2e-87 Identities = 166/220 (75%), Positives = 184/220 (83%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 V+KTSTRQT FLPVIGLVD + LKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PT Sbjct: 123 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPT 182 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y+DIGGL+K+IQELVEAIVLPM HKE+F+ LGI+PPKGVL+YGPPGTGKTL+ARACAA Sbjct: 183 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAA 242 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 QT ATFLKLAGPQLVQMFIGDGAKLVRDAF LAKEKAP IIFIDE+DAIGTKRFDSE +G Sbjct: 243 QTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG 302 Query: 546 DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + Q + NR DILDPA Sbjct: 303 DREVQRTMLELLNQLDGF-QPNTQVKVIAATNRVDILDPA 341 Score = 38.1 bits (87), Expect = 0.024 Identities = 17/23 (73%), Positives = 20/23 (86%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLELLNQLDGF + ++K Sbjct: 305 EVQRTMLELLNQLDGFQPNTQVK 327
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 320 bits (820), Expect = 2e-87 Identities = 166/220 (75%), Positives = 184/220 (83%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 V+KTSTRQT FLPVIGLVD + LKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PT Sbjct: 123 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPT 182 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y+DIGGL+K+IQELVEAIVLPM HKE+F+ LGI+PPKGVL+YGPPGTGKTL+ARACAA Sbjct: 183 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAA 242 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 QT ATFLKLAGPQLVQMFIGDGAKLVRDAF LAKEKAP IIFIDE+DAIGTKRFDSE +G Sbjct: 243 QTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG 302 Query: 546 DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + Q + NR DILDPA Sbjct: 303 DREVQRTMLELLNQLDGF-QPNTQVKVIAATNRVDILDPA 341 Score = 38.1 bits (87), Expect = 0.024 Identities = 17/23 (73%), Positives = 20/23 (86%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLELLNQLDGF + ++K Sbjct: 305 EVQRTMLELLNQLDGFQPNTQVK 327
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 320 bits (819), Expect = 3e-87 Identities = 166/220 (75%), Positives = 184/220 (83%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 V+KTSTRQT FLPVIGLVD + LKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PT Sbjct: 107 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPT 166 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y+DIGGL+K+IQELVEAIVLPM HKE+F+ LGI+PPKGVL+YGPPGTGKTL+ARACAA Sbjct: 167 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAA 226 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 QT ATFLKLAGPQLVQMFIGDGAKLVRDAF LAKEKAP IIFIDE+DAIGTKRFDSE +G Sbjct: 227 QTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG 286 Query: 546 DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + Q + NR DILDPA Sbjct: 287 DREVQRTMLELLNQLDGF-QPNMQVKVIAATNRVDILDPA 325 Score = 37.7 bits (86), Expect = 0.031 Identities = 17/23 (73%), Positives = 20/23 (86%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLELLNQLDGF + ++K Sbjct: 289 EVQRTMLELLNQLDGFQPNMQVK 311
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 319 bits (817), Expect = 5e-87 Identities = 165/220 (75%), Positives = 184/220 (83%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 V+KTSTRQT FLPVIGLVD + LKPGDLVGVNKDSYLIL+TLP++YDSRVKAMEVDE+PT Sbjct: 126 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTDYDSRVKAMEVDERPT 185 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y+DIGGL+K+IQELVEAIVLPM HKE+F+ LGI+PPKGVL+YGPPGTGKTL+ARACAA Sbjct: 186 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAA 245 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 QT ATFLKLAGPQLVQMFIGDGAKLVRDAF LAKEKAP IIFIDE+DAIGTKRFDSE +G Sbjct: 246 QTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAG 305 Query: 546 DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + Q + NR DILDPA Sbjct: 306 DREVQRTMLELLNQLDGF-QPNTQVKVIAATNRVDILDPA 344 Score = 38.1 bits (87), Expect = 0.024 Identities = 17/23 (73%), Positives = 20/23 (86%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLELLNQLDGF + ++K Sbjct: 308 EVQRTMLELLNQLDGFQPNTQVK 330
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 318 bits (816), Expect = 7e-87 Identities = 165/220 (75%), Positives = 183/220 (83%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 V+KTSTRQT FLPVIGLVD + LKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PT Sbjct: 88 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPT 147 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y+DIGGL+K+IQELVEAIVLPM HKE+F+ LGI+PPKGVL+YGPPGTGKTL+ARACAA Sbjct: 148 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAA 207 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 QT ATFLKLAGPQLVQMFIGDGAKLVRDAF LAKEKAP IIFIDE+DAIG KRFDSE +G Sbjct: 208 QTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAG 267 Query: 546 DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + Q + NR DILDPA Sbjct: 268 DREVQRTMLELLNQLDGF-QPTTQVKVIAATNRVDILDPA 306 Score = 37.4 bits (85), Expect = 0.041 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLELLNQLDGF ++K Sbjct: 270 EVQRTMLELLNQLDGFQPTTQVK 292
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 216 bits (551), Expect(2) = 4e-58 Identities = 105/183 (57%), Positives = 137/183 (74%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 VV+K+ST + + V V+PD+L PG V +N+ + ++D LP D R KAMEVDE+P Sbjct: 106 VVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERP 165 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y DIGGLEK++QE+ E + LP+ H E F+K+GI PPKG+LLYGPPGTGKTL+A+A A Sbjct: 166 NVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVA 225 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVS 542 +TNATF+++ G +LV+ FIG+GA LV+D F+LAKEKAP IIFIDEIDAI KR D+ Sbjct: 226 TETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTG 285 Query: 543 GDR 551 GDR Sbjct: 286 GDR 288 Score = 28.5 bits (62), Expect(2) = 4e-58 Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 2/31 (6%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSS--DERIKGDSCNP 639 EVQRT+++LL ++DGF + D +I G + P Sbjct: 289 EVQRTLMQLLAEMDGFDARGDVKIIGATNRP 319
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 205 bits (522), Expect(2) = 1e-55 Identities = 101/183 (55%), Positives = 136/183 (74%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 VV+K+ST + + V VD +LKPG +V +N I+D LP YD VKAMEV+E+P Sbjct: 75 VVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERP 134 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 + D+GGLE++I+E+ EA+VLP+ + F++LGI PPKGVLL+GPPGTGKTL+A+A A Sbjct: 135 KVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVA 194 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVS 542 +T ATF+++ G +LV FIG+GA+LVR+ F LA+EKAP I+FIDEIDAI +KR D S Sbjct: 195 GETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTS 254 Query: 543 GDR 551 GDR Sbjct: 255 GDR 257 Score = 31.6 bits (70), Expect(2) = 1e-55 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTML+LL +LDGF + +K Sbjct: 258 EVQRTMLQLLAELDGFDPLDNVK 280
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 213 bits (542), Expect = 4e-55 Identities = 115/224 (51%), Positives = 152/224 (67%), Gaps = 3/224 (1%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 V++K+ST V VD + L+PG V +N+ S ++D LPSE DSRV AMEVDE P Sbjct: 115 VIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESP 174 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y+DIGGL+++I+E+ E + P+ E F+K+G+ PPKGVLLYGPPGTGKTL+A+A A Sbjct: 175 DVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVA 234 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVS 542 +ATF++LA P+LVQ FIG+GA+LVR+ FELA+EKAP IIFIDEIDAIG +R S Sbjct: 235 NHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATS 294 Query: 543 GDR---RSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 GDR R+ T + + + +D + NR DILDPA Sbjct: 295 GDREVQRTLTQLLAEMDGFDPL----DDIKVIAATNRKDILDPA 334
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 196 bits (498), Expect(2) = 1e-54 Identities = 91/182 (50%), Positives = 133/182 (73%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y DIGGL+ +IQE+ E++ LP+TH E ++++GI+PPKGV+LYGPPGTGKTL+A+A A Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 QT+ATFL++ G +L+Q ++GDG KLVR+ F +A+E AP I+FIDEIDAIGTKR+DS G Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301 Query: 546 DR 551 +R Sbjct: 302 ER 303 Score = 37.0 bits (84), Expect(2) = 1e-54 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 E+QRTMLELLNQLDGF S +K Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVK 326
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 196 bits (498), Expect(2) = 1e-54 Identities = 91/182 (50%), Positives = 133/182 (73%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y DIGGL+ +IQE+ E++ LP+TH E ++++GI+PPKGV+LYGPPGTGKTL+A+A A Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 QT+ATFL++ G +L+Q ++GDG KLVR+ F +A+E AP I+FIDEIDAIGTKR+DS G Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301 Query: 546 DR 551 +R Sbjct: 302 ER 303 Score = 37.0 bits (84), Expect(2) = 1e-54 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 E+QRTMLELLNQLDGF S +K Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVK 326
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 196 bits (498), Expect(2) = 1e-54 Identities = 91/182 (50%), Positives = 133/182 (73%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y DIGGL+ +IQE+ E++ LP+TH E ++++GI+PPKGV+LYGPPGTGKTL+A+A A Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 QT+ATFL++ G +L+Q ++GDG KLVR+ F +A+E AP I+FIDEIDAIGTKR+DS G Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301 Query: 546 DR 551 +R Sbjct: 302 ER 303 Score = 37.0 bits (84), Expect(2) = 1e-54 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 E+QRTMLELLNQLDGF S +K Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVK 326
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 196 bits (497), Expect(2) = 2e-54 Identities = 89/182 (48%), Positives = 133/182 (73%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ TS ++ ++ VD D L+PG V +N + ++ L + D V M++++ P Sbjct: 121 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQ 180 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y DIGGL+ +IQE+ E++ LP+TH E ++++GI+PPKGV+LYGPPGTGKTL+A+A A Sbjct: 181 ETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 240 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 QT+ATFL++ G +L+Q ++GDG KLVR+ F +A+E AP I+FIDEIDA+GTKR+DS G Sbjct: 241 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGG 300 Query: 546 DR 551 +R Sbjct: 301 ER 302 Score = 37.0 bits (84), Expect(2) = 2e-54 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 E+QRTMLELLNQLDGF S +K Sbjct: 303 EIQRTMLELLNQLDGFDSRGDVK 325
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 193 bits (491), Expect(2) = 9e-54 Identities = 89/182 (48%), Positives = 132/182 (72%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ TS ++ ++ VD D L+PG V +N + ++ L + D V M++++ P Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQ 181 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y DIGGL+ +IQE+ E++ LP+TH E ++++GI+PPKGV+LYGPPGTGKTL+A+A A Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 QT+ATFL++ G +L+Q ++GDG KLVR+ F +A+E P I+FIDEIDAIGTKR+DS G Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGG 301 Query: 546 DR 551 +R Sbjct: 302 ER 303 Score = 37.0 bits (84), Expect(2) = 9e-54 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 E+QRTMLELLNQLDGF S +K Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVK 326
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 193 bits (490), Expect(2) = 1e-53 Identities = 86/182 (47%), Positives = 134/182 (73%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ T+ ++ ++ VD + L+PG V +N ++ ++ L + D V M++++ P Sbjct: 125 IVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQ 184 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y D+GGL+++IQE+ EA+ LP+TH E ++++GIRPPKGV+LYG PGTGKTL+A+A A Sbjct: 185 ETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVAN 244 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 QT+ATFL++ G +L+Q ++GDG K+VR+ F +A+E AP I+FIDEIDA+GTKR+DS G Sbjct: 245 QTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGG 304 Query: 546 DR 551 +R Sbjct: 305 ER 306 Score = 37.0 bits (84), Expect(2) = 1e-53 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 E+QRTMLELLNQLDGF S +K Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVK 329
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 197 bits (501), Expect(2) = 1e-52 Identities = 96/183 (52%), Positives = 129/183 (70%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 V +K++T + +D L+PG V +N+ ++ I+D LPSE D V MEV+EKP Sbjct: 87 VAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKP 146 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y IGGLE++++E+ E + LP+ E F+K+GI PPKGVLLYGPPGTGKTL+A+A A Sbjct: 147 DVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVA 206 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVS 542 +TNATF+K+ + V+ +IG+GA+LVR FELAKEK+P IIFIDEIDA+ KR S S Sbjct: 207 HETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTS 266 Query: 543 GDR 551 GDR Sbjct: 267 GDR 269 Score = 29.3 bits (64), Expect(2) = 1e-52 Identities = 12/18 (66%), Positives = 16/18 (88%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSS 606 EVQRT+++LL +LDGF S Sbjct: 270 EVQRTLMQLLAELDGFES 287
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 191 bits (484), Expect(2) = 2e-52 Identities = 88/182 (48%), Positives = 132/182 (72%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ + T ++ ++ VD + L+PG V ++ + I+ L + D V M++D+ PT Sbjct: 119 IVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPT 178 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y+DIGGLE +IQE+ E++ LP+TH E ++++GI+PPKGV+LYG PGTGKTL+A+A A Sbjct: 179 ESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 238 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 QT+ATFL++ G +L+Q ++GDG +L R F++A E AP I+FIDEIDAIGTKR+DS G Sbjct: 239 QTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGG 298 Query: 546 DR 551 +R Sbjct: 299 ER 300 Score = 35.4 bits (80), Expect(2) = 2e-52 Identities = 16/23 (69%), Positives = 18/23 (78%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 E+QRTMLELLNQLDGF +K Sbjct: 301 EIQRTMLELLNQLDGFDDRGDVK 323
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 192 bits (487), Expect(2) = 3e-52 Identities = 89/182 (48%), Positives = 132/182 (72%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ ++T ++ V+ ++D + LKPG V ++K S ++D LP E DS ++ + DEKP Sbjct: 98 IVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPD 157 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 Y DIGGL+ + QE+ EA+ LP+TH E +Q++GI PP+GVL+YGPPG GKT++A+A AA Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAA 217 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 T A+F+++ G + VQ ++G+G ++VRD F LAKE +P IIFIDEIDAI TKRFD++ Sbjct: 218 NTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGA 277 Query: 546 DR 551 DR Sbjct: 278 DR 279 Score = 33.5 bits (75), Expect(2) = 3e-52 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQR +LELLNQ+DGF +K Sbjct: 280 EVQRILLELLNQMDGFDQSTNVK 302
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 203 bits (517), Expect = 3e-52 Identities = 109/221 (49%), Positives = 152/221 (68%), Gaps = 1/221 (0%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 V+K+ST + + VDP+++ PG V +N+ + I++ LP E D R AME++EKP Sbjct: 85 VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPD 144 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 + DIGGL +I+++ E + LP+ + E F+K+GI PPKGVLLYGPPGTGKTL+A+A A Sbjct: 145 ISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAY 204 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 +TNA+F+++ G +LV+ FIG+GAKLVRD F+LAKEK+PCIIFIDEIDA+ +KR +S G Sbjct: 205 ETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGG 264 Query: 546 DRR-SATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR T +AE + + D + NR DILDPA Sbjct: 265 DREVQRTLMQLLAEMDGFDSR--GDVKIIAATNRPDILDPA 303
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 198 bits (504), Expect(2) = 5e-52 Identities = 98/165 (59%), Positives = 123/165 (74%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 ++ D LKPG V +++ + I++ LPSE D V EV E+P YNDIGGLEK++QEL Sbjct: 92 IERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELR 151 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 EAI LP+ H E F+++GI PPKGVLLYGPPG GKTLMA+A A NATF+++ G +LV+ Sbjct: 152 EAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRK 211 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 FIG+GA+LV + FELAKEKAP IIFIDEIDAIG KR D G+R Sbjct: 212 FIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGER 256 Score = 26.2 bits (56), Expect(2) = 5e-52 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EV RT+++LL ++DGF +K Sbjct: 257 EVNRTLMQLLAEMDGFDPRGNVK 279
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 186 bits (472), Expect(2) = 8e-52 Identities = 86/172 (50%), Positives = 127/172 (73%) Frame = +3 Query: 36 FLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 215 ++ ++ VD D L+PG V ++ + I+ L + D + M++D+ PTE Y DIGGLE Sbjct: 138 YVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLE 197 Query: 216 KEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 395 +IQE+ EA+ LP+TH E ++++GI+PPKGV+LYG PGTGKTL+A+A A QT+ATFL++ Sbjct: 198 SQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVV 257 Query: 396 GPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 G +L+Q ++GDG +LVR F A+E +P I+FIDEIDAIGTKR+D++ +R Sbjct: 258 GSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAER 309 Score = 37.7 bits (86), Expect(2) = 8e-52 Identities = 16/21 (76%), Positives = 19/21 (90%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDER 615 E+QRTMLELLNQLDGF + +R Sbjct: 310 EIQRTMLELLNQLDGFDTSQR 330
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 186 bits (473), Expect(2) = 1e-51 Identities = 86/182 (47%), Positives = 128/182 (70%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ +S ++ ++ VD D L+PG + ++ ++ L E D V M+V++ P Sbjct: 130 IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPL 189 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y DIGGL+ +IQE+ EA+ LP+TH E ++ +GIRPPKGV+LYG PGTGKTL+A+A A Sbjct: 190 ESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVAN 249 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 T+ATFL++ G +L+Q ++GDG KLVR+ F +A E +P I+FIDEIDA+GTKR+D+ G Sbjct: 250 STSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGG 309 Query: 546 DR 551 +R Sbjct: 310 ER 311 Score = 37.0 bits (84), Expect(2) = 1e-51 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 E+QRTMLELLNQLDGF S +K Sbjct: 312 EIQRTMLELLNQLDGFDSRGDVK 334
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 194 bits (493), Expect(2) = 1e-51 Identities = 95/183 (51%), Positives = 131/183 (71%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 VV+K+ST + ++ + LKPG V +N+ + I++ LP+ D V EV+EKP Sbjct: 77 VVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKP 136 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y DIGGL+ +I+E+ EA+ LP+ E F ++GI PPKGVLLYGPPGTGKTL+A+A A Sbjct: 137 EVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVA 196 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVS 542 QT ATF+++ G + VQ +IG+GA+LVR+ F+LAKEKAP IIFIDE+DAI +R +S+ S Sbjct: 197 NQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTS 256 Query: 543 GDR 551 GDR Sbjct: 257 GDR 259 Score = 29.3 bits (64), Expect(2) = 1e-51 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTM++LL +LDGF +K Sbjct: 260 EVQRTMMQLLAELDGFDPRGDVK 282
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 189 bits (481), Expect(2) = 5e-51 Identities = 86/182 (47%), Positives = 132/182 (72%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++++++ T+ + ++ +D + LKP V + + S ++DTLP E DS + + DEKP+ Sbjct: 87 IVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPS 146 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 E Y+DIGG + + QE+ EA+ LP+TH ++++GI PP+GVLLYGPPGTGKT++A+A A Sbjct: 147 ESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAH 206 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 T+A F+++ G + VQ ++G+G +LVRD F LA+E +P IIFIDEIDAI TKRFD++ Sbjct: 207 HTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGA 266 Query: 546 DR 551 DR Sbjct: 267 DR 268 Score = 31.6 bits (70), Expect(2) = 5e-51 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQR ++ELLNQ+DGF +K Sbjct: 269 EVQRILMELLNQMDGFDVSVNVK 291
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 193 bits (491), Expect(2) = 1e-50 Identities = 94/165 (56%), Positives = 123/165 (74%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 ++ D L+PG V +++ + I++ LPS D V EV E+P YNDIGGL+K++QEL Sbjct: 94 IERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELR 153 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 EAI LP+ H E F+++GI PPKGVLLYGPPG GKTLMA+A A + NATF+++ G +LV+ Sbjct: 154 EAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRK 213 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 +IG+GA+LV + FELAKEKAP IIFIDEIDAIG KR D G+R Sbjct: 214 YIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGER 258 Score = 26.2 bits (56), Expect(2) = 1e-50 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EV RT+++LL ++DGF +K Sbjct: 259 EVNRTLMQLLAEMDGFDPRGNVK 281
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 192 bits (488), Expect(2) = 3e-50 Identities = 93/165 (56%), Positives = 122/165 (73%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 +D L+PG V +++ + I++ LP+ D V EV E+P YNDIGGL+K++QEL Sbjct: 91 IDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELR 150 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 EAI LP+ H E F+++GI PPKGVLLYGPPG GKTLMA+A A + NATF+++ G +LV+ Sbjct: 151 EAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRK 210 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 +IG+GA+LV + FELAKEKAP IIFIDEIDAIG KR D G+R Sbjct: 211 YIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGER 255 Score = 26.2 bits (56), Expect(2) = 3e-50 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EV RT+++LL ++DGF +K Sbjct: 256 EVNRTLMQLLAEMDGFDPRGNVK 278
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 182 bits (461), Expect(2) = 7e-50 Identities = 87/171 (50%), Positives = 123/171 (71%), Gaps = 3/171 (1%) Frame = +3 Query: 45 VIGL---VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 215 V+GL V P +++ G VGV+++ Y I LP + D V M V+EKP YND+GG + Sbjct: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174 Query: 216 KEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 395 ++I+++ E + LPM H E+F KLGI PPKGVL YGPPGTGKTL+ARA A +T+A F+++ Sbjct: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234 Query: 396 GPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 G +LVQ ++G+GA++VR+ F++A+ K CI+F DE+DAIG RFD V GD Sbjct: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD 285 Score = 35.4 bits (80), Expect(2) = 7e-50 Identities = 16/23 (69%), Positives = 19/23 (82%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLE++NQLDGF + IK Sbjct: 287 EVQRTMLEIVNQLDGFDARGNIK 309
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 182 bits (461), Expect(2) = 7e-50 Identities = 87/171 (50%), Positives = 123/171 (71%), Gaps = 3/171 (1%) Frame = +3 Query: 45 VIGL---VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 215 V+GL V P +++ G VGV+++ Y I LP + D V M V+EKP YND+GG + Sbjct: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174 Query: 216 KEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 395 ++I+++ E + LPM H E+F KLGI PPKGVL YGPPGTGKTL+ARA A +T+A F+++ Sbjct: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234 Query: 396 GPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 G +LVQ ++G+GA++VR+ F++A+ K CI+F DE+DAIG RFD V GD Sbjct: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD 285 Score = 35.4 bits (80), Expect(2) = 7e-50 Identities = 16/23 (69%), Positives = 19/23 (82%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLE++NQLDGF + IK Sbjct: 287 EVQRTMLEIVNQLDGFDARGNIK 309
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 182 bits (461), Expect(2) = 7e-50 Identities = 87/171 (50%), Positives = 123/171 (71%), Gaps = 3/171 (1%) Frame = +3 Query: 45 VIGL---VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 215 V+GL V P +++ G VGV+++ Y I LP + D V M V+EKP YND+GG + Sbjct: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174 Query: 216 KEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 395 ++I+++ E + LPM H E+F KLGI PPKGVL YGPPGTGKTL+ARA A +T+A F+++ Sbjct: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234 Query: 396 GPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 G +LVQ ++G+GA++VR+ F++A+ K CI+F DE+DAIG RFD V GD Sbjct: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD 285 Score = 35.4 bits (80), Expect(2) = 7e-50 Identities = 16/23 (69%), Positives = 19/23 (82%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLE++NQLDGF + IK Sbjct: 287 EVQRTMLEIVNQLDGFDARGNIK 309
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 182 bits (461), Expect(2) = 7e-50 Identities = 87/171 (50%), Positives = 123/171 (71%), Gaps = 3/171 (1%) Frame = +3 Query: 45 VIGL---VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 215 V+GL V P +++ G VGV+++ Y I LP + D V M V+EKP YND+GG + Sbjct: 114 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 173 Query: 216 KEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 395 ++I+++ E + LPM H E+F KLGI PPKGVL YGPPGTGKTL+ARA A +T+A F+++ Sbjct: 174 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 233 Query: 396 GPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 G +LVQ ++G+GA++VR+ F++A+ K CI+F DE+DAIG RFD V GD Sbjct: 234 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD 284 Score = 35.4 bits (80), Expect(2) = 7e-50 Identities = 16/23 (69%), Positives = 19/23 (82%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLE++NQLDGF + IK Sbjct: 286 EVQRTMLEIVNQLDGFDARGNIK 308
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 191 bits (484), Expect(2) = 1e-49 Identities = 92/165 (55%), Positives = 122/165 (73%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 +D L+PG V +++ + +++ LP+ D V EV E+P YNDIGGL+K++QEL Sbjct: 94 IDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELR 153 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 EAI LP+ H E F+++GI PPKGVLLYGPPG GKTLMA+A A + NATF+++ G +LV+ Sbjct: 154 EAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRK 213 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 +IG+GA+LV + FELAKEKAP IIFIDEIDAIG KR D G+R Sbjct: 214 YIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGER 258 Score = 26.2 bits (56), Expect(2) = 1e-49 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EV RT+++LL ++DGF +K Sbjct: 259 EVNRTLMQLLAEMDGFDPRGNVK 281
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 185 bits (470), Expect(2) = 5e-49 Identities = 87/183 (47%), Positives = 130/183 (71%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 V++++S+ + + + +D +KPG V +N+ IL+ LP + D VK ME+ E+P Sbjct: 70 VLVRSSSGPNLVVNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIVKTMEIIERP 129 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y++IGGLE++I+EL E + LP+ + E F+++G+ PPKGVLLYGPPGTGKT++A+A A Sbjct: 130 NVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVA 189 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVS 542 ++NA F+ + + Q F+G+GA++VR+ FE+AK KAP IIFIDEIDAIG KR D S Sbjct: 190 TESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTS 249 Query: 543 GDR 551 G+R Sbjct: 250 GER 252 Score = 29.3 bits (64), Expect(2) = 5e-49 Identities = 11/23 (47%), Positives = 18/23 (78%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 E+QRT+++LL +LDGF + +K Sbjct: 253 EIQRTLMQLLAELDGFDPLDNVK 275
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 191 bits (486), Expect = 1e-48 Identities = 100/224 (44%), Positives = 147/224 (65%), Gaps = 3/224 (1%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 V++++S+ + + V +D LKPG LV + + I++ LP D+ VK+ EV EKP Sbjct: 70 VIVRSSSGPNLIVNVSSNIDIKKLKPGSLVALTQRGSTIVEVLPEREDAYVKSFEVIEKP 129 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y+DIGGL ++I E+ E I LP+ + E F+++GI PPKGVLLYGPPGTGKTL+A+A A Sbjct: 130 NVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVA 189 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVS 542 ++NATF+++ + Q F+G+GA++VR+ FELA+ KAP I+FIDEIDAIG KR D S Sbjct: 190 TESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGTS 249 Query: 543 GDR---RSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 G+R R+ + + + + ++ + NR DILDPA Sbjct: 250 GEREIQRTLMQLLAEIDGFKPL----DNVKIIAATNRLDILDPA 289
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 182 bits (463), Expect(2) = 1e-48 Identities = 88/161 (54%), Positives = 123/161 (76%) Frame = +3 Query: 66 DNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAI 245 D L+ GD V +N DS+ + L E D+R +AMEVDE P+ Y DIGGL+ +++E+ EA+ Sbjct: 110 DTLEVGDRVAIN-DSFSVQRVLDDETDARAQAMEVDESPSVTYADIGGLDDQLREVREAV 168 Query: 246 VLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 425 P+ + E+F +G+ PP GVLL+GPPGTGKT++A+A A QT+A+F+K+AG +LV+ FIG Sbjct: 169 EDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIG 228 Query: 426 DGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 +G++LVRD FELA++K P IIFIDEIDA+ KR DS+ SGD Sbjct: 229 EGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKTSGD 269 Score = 30.4 bits (67), Expect(2) = 1e-48 Identities = 14/21 (66%), Positives = 19/21 (90%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDER 615 EVQRTM++LL+++DGF DER Sbjct: 271 EVQRTMMQLLSEMDGF--DER 289
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 189 bits (480), Expect = 6e-48 Identities = 93/220 (42%), Positives = 142/220 (64%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + ++ DEKP Sbjct: 99 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPD 158 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 Y+DIGG++ + QE+ EA+ LP+TH E ++++GI PP+GVL+YGPPG GKT++A A A Sbjct: 159 VQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAH 218 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 T A F+++ G + VQ ++G+G ++VRD F LAKE +P IIFIDEIDAI TKRFD++ Sbjct: 219 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGA 278 Query: 546 DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + Q + + + NRAD LDPA Sbjct: 279 DREVQRILLELLNQMDGFDQ-TTNVKVIMATNRADTLDPA 317 Score = 33.1 bits (74), Expect = 0.77 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQR +LELLNQ+DGF +K Sbjct: 281 EVQRILLELLNQMDGFDQTTNVK 303
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 174 bits (440), Expect(2) = 1e-47 Identities = 82/164 (50%), Positives = 117/164 (71%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 V P +++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG +++I++L Sbjct: 129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 188 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E + P+ H E+F LGI PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ Sbjct: 189 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 248 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 ++G+GA++VR+ FE+A+ K C+IF DEIDAIG RFD GD Sbjct: 249 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGD 292 Score = 35.8 bits (81), Expect(2) = 1e-47 Identities = 17/23 (73%), Positives = 18/23 (78%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLEL+NQLDGF IK Sbjct: 294 EVQRTMLELINQLDGFDPRGNIK 316
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 174 bits (440), Expect(2) = 1e-47 Identities = 82/164 (50%), Positives = 117/164 (71%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 V P +++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG +++I++L Sbjct: 128 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 187 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E + P+ H E+F LGI PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ Sbjct: 188 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 247 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 ++G+GA++VR+ FE+A+ K C+IF DEIDAIG RFD GD Sbjct: 248 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGD 291 Score = 35.8 bits (81), Expect(2) = 1e-47 Identities = 17/23 (73%), Positives = 18/23 (78%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLEL+NQLDGF IK Sbjct: 293 EVQRTMLELINQLDGFDPRGNIK 315
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 174 bits (440), Expect(2) = 1e-47 Identities = 82/164 (50%), Positives = 117/164 (71%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 V P +++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG +++I++L Sbjct: 128 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 187 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E + P+ H E+F LGI PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ Sbjct: 188 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 247 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 ++G+GA++VR+ FE+A+ K C+IF DEIDAIG RFD GD Sbjct: 248 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGD 291 Score = 35.8 bits (81), Expect(2) = 1e-47 Identities = 17/23 (73%), Positives = 18/23 (78%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLEL+NQLDGF IK Sbjct: 293 EVQRTMLELINQLDGFDPRGNIK 315
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 175 bits (444), Expect(2) = 2e-47 Identities = 83/164 (50%), Positives = 116/164 (70%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 V P +++ G VG +++ Y I LP + D V M+V+EKP Y D+GG +++I+ L Sbjct: 133 VSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLR 192 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E + LP+ E+F KLGI PPKG++LYGPPGTGKTL ARA A +T+ATF+++ G +LVQ Sbjct: 193 EVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQK 252 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 ++G+GA++VR+ FE+A+ K CIIF DEIDAIG RFD GD Sbjct: 253 YVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGD 296 Score = 33.5 bits (75), Expect(2) = 2e-47 Identities = 16/23 (69%), Positives = 17/23 (73%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLEL+ QLDGF IK Sbjct: 298 EVQRTMLELITQLDGFDPRGNIK 320
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 172 bits (437), Expect(2) = 3e-47 Identities = 81/164 (49%), Positives = 117/164 (71%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 V P +++ G VGV+++ Y I LP++ D V M+V+EKP Y+D+GG + +I++L Sbjct: 131 VAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLR 190 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E + P+ H E++ LGI PPKGVLLYGPPGTGKTL ARA A +T+A F+++ G +LVQ Sbjct: 191 EVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 250 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 ++G+GA++VR+ FE+A+ K C+IF DEIDA+G RFD GD Sbjct: 251 YVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGD 294 Score = 35.8 bits (81), Expect(2) = 3e-47 Identities = 17/23 (73%), Positives = 18/23 (78%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLEL+NQLDGF IK Sbjct: 296 EVQRTMLELINQLDGFDPRGNIK 318
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 172 bits (437), Expect(2) = 3e-47 Identities = 82/164 (50%), Positives = 116/164 (70%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 V P +++ G VGV+++ Y I LP + D V M+V+EKP Y+D+GG +++I++L Sbjct: 128 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLR 187 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E + P+ H E+F LGI PPKGVLL+GPPGTGKTL ARA A +T+A F+ + G +LVQ Sbjct: 188 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQK 247 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 ++G+GA++VR+ FE+A+ K C+IF DEIDAIG RFD GD Sbjct: 248 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGD 291 Score = 35.8 bits (81), Expect(2) = 3e-47 Identities = 17/23 (73%), Positives = 18/23 (78%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLEL+NQLDGF IK Sbjct: 293 EVQRTMLELINQLDGFDPRGNIK 315
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 176 bits (446), Expect(2) = 4e-47 Identities = 80/169 (47%), Positives = 118/169 (69%) Frame = +3 Query: 45 VIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEI 224 ++ VD + LKP V +++ S I+ LP E DS + M EKP+ Y D+GGL+ + Sbjct: 84 ILSTVDRELLKPNTTVALHRHSSAIVGVLPPEVDSTIPVMGESEKPSVTYGDVGGLDVQK 143 Query: 225 QELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 404 QE+ E + LP+ + ++++GI PP+GVLLYGPPGTGKT++ +A A T ATF+++ G + Sbjct: 144 QEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVANHTKATFIRVNGSE 203 Query: 405 LVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 VQ ++G+G ++VRD F LA+EKAP I+FIDE+D+I TKRFD+ S DR Sbjct: 204 FVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSADR 252 Score = 32.0 bits (71), Expect(2) = 4e-47 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQR ++ELLNQ+DGF +K Sbjct: 253 EVQRVLIELLNQMDGFDPAANVK 275
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 186 bits (471), Expect = 7e-47 Identities = 93/220 (42%), Positives = 141/220 (64%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ ++T ++ ++ ++ + LKP VG+++ S ++D LP E DS + + EKP Sbjct: 97 IVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPD 156 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 YNDIGG + + QE+ EA+ LP+TH E ++++GI PP+GVLLYGPPGTGKT++A+A A Sbjct: 157 VTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAH 216 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 T A F+++ G + VQ ++G+G ++VRD F LAKE AP IIFIDE+DAI T RFD++ Sbjct: 217 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA 276 Query: 546 DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + Q + + + NRAD LDPA Sbjct: 277 DREVQRILMELLNQMDGFDQ-TVNVKVIMATNRADTLDPA 315 Score = 32.0 bits (71), Expect = 1.7 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQR ++ELLNQ+DGF +K Sbjct: 279 EVQRILMELLNQMDGFDQTVNVK 301
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 174 bits (440), Expect(2) = 7e-47 Identities = 86/171 (50%), Positives = 118/171 (69%), Gaps = 3/171 (1%) Frame = +3 Query: 45 VIGL---VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 215 V+GL V P +++ G VGV++ Y I LP D V M V+EKP Y+D+GG + Sbjct: 156 VVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCK 215 Query: 216 KEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 395 +I++L E + LP+ E+F LGI PPKG+LLYGPPGTGKTL ARA A +T+ATF+++ Sbjct: 216 DQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVI 275 Query: 396 GPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 G +LVQ ++G+GA++VR+ FE+A+ K CIIF DEIDA+G RFD GD Sbjct: 276 GSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGD 326 Score = 33.5 bits (75), Expect(2) = 7e-47 Identities = 16/23 (69%), Positives = 17/23 (73%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQRTMLEL+ QLDGF IK Sbjct: 328 EVQRTMLELITQLDGFDPRGNIK 350
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 176 bits (445), Expect(2) = 2e-46 Identities = 86/159 (54%), Positives = 117/159 (73%) Frame = +3 Query: 72 LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVL 251 L+PG V VN +S ++ L E D R + MEVD+ P Y DIGGL+ +++E+ E + L Sbjct: 109 LEPGSRVAVN-NSLSVVRQLDDEADVRARVMEVDDSPDVGYEDIGGLDDQLREVRETVEL 167 Query: 252 PMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDG 431 PM F+ +GI PP GVLL+GPPGTGKTLMA+A A+QT+A+F+K+AG +LV FIG+G Sbjct: 168 PMKDPGLFETVGINPPSGVLLHGPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEG 227 Query: 432 AKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 AKLVRD F++A++ P ++FIDEIDAI +KR DS+ SGD Sbjct: 228 AKLVRDLFQVARDHEPAVVFIDEIDAIASKRTDSKTSGD 266 Score = 30.4 bits (67), Expect(2) = 2e-46 Identities = 14/21 (66%), Positives = 19/21 (90%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDER 615 EVQRTM++LL+++DGF DER Sbjct: 268 EVQRTMMQLLSEMDGF--DER 286
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 184 bits (466), Expect = 3e-46 Identities = 92/220 (41%), Positives = 140/220 (63%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ ++T ++ ++ ++ + LKP V +++ S ++D LP E DS + + EKP Sbjct: 92 IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPD 151 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 YNDIGG + + QE+ EA+ LP+TH E ++++GI PP+GVLLYGPPGTGKT++A+A A Sbjct: 152 VSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAN 211 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 T A F+++ G + VQ ++G+G ++VRD F LAKE AP IIFIDE+DAI T RFD++ Sbjct: 212 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA 271 Query: 546 DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + Q + + + NRAD LDPA Sbjct: 272 DREVQRILMELLNQMDGFDQ-TVNVKVIMATNRADTLDPA 310 Score = 32.0 bits (71), Expect = 1.7 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQR ++ELLNQ+DGF +K Sbjct: 274 EVQRILMELLNQMDGFDQTVNVK 296
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 182 bits (463), Expect = 6e-46 Identities = 97/221 (43%), Positives = 142/221 (64%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 +++++S + V +D L PG V +N+ + I + +PS + V AMEV E Sbjct: 95 IIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESV 154 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 DY+ IGGL+++IQEL EA+ LP+T E+F ++GI PPKGVLLYG PGTGKTL+A+A A Sbjct: 155 EVDYDQIGGLDEQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVA 214 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVS 542 +TNATF+++ G +LVQ +IGDG+KLVR+ FE+A++KAP IIFIDE+D+I +R + Sbjct: 215 HRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTG 274 Query: 543 GDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + + ++ R NR D+LDPA Sbjct: 275 ADREVQRTLMQLLAEMDGFDK-RKNIRIIAATNRPDVLDPA 314 Score = 30.4 bits (67), Expect = 5.0 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = +1 Query: 466 RRRPPASFLLMRLMQLEQSVLTVKLVVTGEVQRTMLELLNQLDGFSSDERIK 621 R++ P+ + L + L EVQRT+++LL ++DGF + I+ Sbjct: 249 RKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIR 300
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 182 bits (463), Expect = 6e-46 Identities = 93/220 (42%), Positives = 141/220 (64%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + + D+KP Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 Y DIGG++ + QE+ EA+ LP+TH E ++++GI PP+GVL+YGPPG GKT++A+A A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 T A F+++ G + VQ ++G+G ++VRD F LAKE AP IIFIDEIDAI TKRFD++ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 546 DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + Q + + + NRAD LDPA Sbjct: 282 DREVQRILLELLNQMDGFDQ-NVNVKVIMATNRADTLDPA 320 Score = 33.5 bits (75), Expect = 0.59 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQR +LELLNQ+DGF + +K Sbjct: 284 EVQRILLELLNQMDGFDQNVNVK 306
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 182 bits (463), Expect = 6e-46 Identities = 93/220 (42%), Positives = 141/220 (64%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + + D+KP Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 Y DIGG++ + QE+ EA+ LP+TH E ++++GI PP+GVL+YGPPG GKT++A+A A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 T A F+++ G + VQ ++G+G ++VRD F LAKE AP IIFIDEIDAI TKRFD++ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 546 DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + Q + + + NRAD LDPA Sbjct: 282 DREVQRILLELLNQMDGFDQ-NVNVKVIMATNRADTLDPA 320 Score = 33.5 bits (75), Expect = 0.59 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQR +LELLNQ+DGF + +K Sbjct: 284 EVQRILLELLNQMDGFDQNVNVK 306
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 180 bits (457), Expect = 3e-45 Identities = 96/221 (43%), Positives = 141/221 (63%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 +++++S + V +D L PG V +N+ + I + +PS + V AMEV E Sbjct: 95 IIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESI 154 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 DY+ IGGL+++IQEL EA+ LP+ E+F ++GI PPKGVLLYG PGTGKTL+A+A A Sbjct: 155 EVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVA 214 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVS 542 +TNATF+++ G +LVQ +IGDG+KLVR+ FE+A++KAP IIFIDE+D+I +R + Sbjct: 215 HRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTG 274 Query: 543 GDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + + ++ R NR D+LDPA Sbjct: 275 ADREVQRTLMQLLAEMDGFDK-RKNIRIIAATNRPDVLDPA 314 Score = 30.4 bits (67), Expect = 5.0 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = +1 Query: 466 RRRPPASFLLMRLMQLEQSVLTVKLVVTGEVQRTMLELLNQLDGFSSDERIK 621 R++ P+ + L + L EVQRT+++LL ++DGF + I+ Sbjct: 249 RKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIR 300
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 180 bits (457), Expect = 3e-45 Identities = 92/220 (41%), Positives = 140/220 (63%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ ++T ++ ++ +D + LKP V ++K S ++D LP DS + + D+KP Sbjct: 102 IVASTTGSNYYVRMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPD 161 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 Y DIGG++ + QE+ EA+ LP+TH E ++++GI PP+GVL+YGPPG GKT++A+A A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 T A F+++ G + VQ ++G+G ++VRD F LAKE AP IIFIDEIDAI TKRFD++ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 546 DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + Q + + + NRAD LDPA Sbjct: 282 DREVQRILLELLNQMDGFDQ-NVNVKVIMATNRADTLDPA 320 Score = 33.5 bits (75), Expect = 0.59 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 EVQR +LELLNQ+DGF + +K Sbjct: 284 EVQRILLELLNQMDGFDQNVNVK 306
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 179 bits (453), Expect = 9e-45 Identities = 89/220 (40%), Positives = 141/220 (64%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++++ST + ++ +D + LKP V +++ S ++D LP E DS + + +EKP Sbjct: 103 IVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPD 162 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 Y D+GGL+ + QE+ EA+ LP+T + ++++GI PP+GVLLYGPPGTGKT++ +A A Sbjct: 163 VTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 222 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 T A+F+++ G + VQ ++G+G ++VRD F +A+E +P IIFIDEIDAI TKRFD++ Sbjct: 223 STTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGA 282 Query: 546 DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + Q + + + NRAD LDPA Sbjct: 283 DREVQRILLELLNQMDGFEQ-SSNVKVIMATNRADTLDPA 321
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 177 bits (448), Expect = 3e-44 Identities = 89/220 (40%), Positives = 138/220 (62%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ ++T + ++ +D + LKP V + + S ++D LP E DS + + DE+P Sbjct: 71 IVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPD 130 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 Y D+GGL+ + QE+ EA+ LP+T + ++++GI PP+GVLLYGPPGTGKT++ +A A Sbjct: 131 VSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 190 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 T A F+++ G + VQ ++G+G ++VRD F +A+E AP IIFIDEIDAI TKRFD++ Sbjct: 191 STAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGA 250 Query: 546 DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + Q + + + NRAD LDPA Sbjct: 251 DREVQRILIELLTQMDGFDQ-GANVKVIMATNRADTLDPA 289
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 162 bits (410), Expect(2) = 4e-44 Identities = 80/165 (48%), Positives = 110/165 (66%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 +D LKPG V ++ + I+ LP E D V M ++ Y++IGGL ++I+EL Sbjct: 87 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELR 146 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E I LP+T+ E FQ++GI PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +V Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DR Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADR 251 Score = 35.8 bits (81), Expect(2) = 4e-44 Identities = 14/23 (60%), Positives = 20/23 (86%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 E+QRT++ELLNQ+DGF + R+K Sbjct: 252 EIQRTLMELLNQMDGFDTLHRVK 274
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 162 bits (410), Expect(2) = 4e-44 Identities = 80/165 (48%), Positives = 110/165 (66%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 +D LKPG V ++ + I+ LP E D V M ++ Y++IGGL ++I+EL Sbjct: 87 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELR 146 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E I LP+T+ E FQ++GI PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +V Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DR Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADR 251 Score = 35.8 bits (81), Expect(2) = 4e-44 Identities = 14/23 (60%), Positives = 20/23 (86%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 E+QRT++ELLNQ+DGF + R+K Sbjct: 252 EIQRTLMELLNQMDGFDTLHRVK 274
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 162 bits (410), Expect(2) = 4e-44 Identities = 80/165 (48%), Positives = 110/165 (66%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 +D LKPG V ++ + I+ LP E D V M ++ Y++IGGL ++I+EL Sbjct: 87 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELR 146 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E I LP+T+ E FQ++GI PPKG LLYGPPGTGKTL+ARA A+Q + FLK+ +V Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DR Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADR 251 Score = 35.8 bits (81), Expect(2) = 4e-44 Identities = 14/23 (60%), Positives = 20/23 (86%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 E+QRT++ELLNQ+DGF + R+K Sbjct: 252 EIQRTLMELLNQMDGFDTLHRVK 274
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 173 bits (438), Expect = 5e-43 Identities = 86/220 (39%), Positives = 138/220 (62%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++ ++T + + ++ +D + LKP V +++ S ++D LP + DS + M +EKP Sbjct: 109 IVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPD 168 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 Y D+GGL+ + QE+ EA+ LP+ + ++++GI PP+GVLLYGPPGTGKT++ +A A Sbjct: 169 VTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 228 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 T A F+++ G + V ++G+G ++VRD F LA+E AP IIFIDE+D+I TKRFD++ Sbjct: 229 STKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGS 288 Query: 546 DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DR + + Q + + + NRAD LDPA Sbjct: 289 DREVQRILIELLTQMDGFDQ-STNVKVIMATNRADTLDPA 327
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 171 bits (433), Expect = 2e-42 Identities = 95/228 (41%), Positives = 140/228 (61%), Gaps = 7/228 (3%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 V++K S + + ++ +L PG V + DSY + LP++ D V M+V++ P Sbjct: 92 VLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVP 151 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y +GGL+++I+E+ E I LP+ H E F+ LGI PKGV++YGPPGTGKTL+ARA A Sbjct: 152 DATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVA 211 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF----- 527 T+ TF++++G +LVQ +IG+G+K+VR+ F +A+E AP IIF+DEID+IG+ R Sbjct: 212 HHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKG 271 Query: 528 --DSEVSGDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DSEV N + ES + I + + NR DILDPA Sbjct: 272 GGDSEVQRTMLELLNQLDGFESTQNI-------KIIMATNRIDILDPA 312
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 169 bits (428), Expect = 7e-42 Identities = 92/210 (43%), Positives = 131/210 (62%), Gaps = 7/210 (3%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 +D +KP V + DSY ++ LP++ D V M V++ P Y +GGLEK+I+E+ Sbjct: 99 IDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIK 158 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E I LP+ H E F+ LGI PKG+LLYGPPGTGKTL+ARA A T+ F++++G +LVQ Sbjct: 159 EVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQK 218 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF-------DSEVSGDRRSATNYVG 575 +IG+G+++VR+ F +A+E AP IIF+DEID+IG+ R DSEV N + Sbjct: 219 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLD 278 Query: 576 VAESARWI*Q**ED*R**LQPNRADILDPA 665 E+ + I + + NR DILDPA Sbjct: 279 GFEATKNI-------KVIMATNRIDILDPA 301
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 169 bits (428), Expect = 7e-42 Identities = 97/227 (42%), Positives = 137/227 (60%), Gaps = 6/227 (2%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 V++K + V +D +++ P V + DSY + LP++ D V M V++ P Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y IGGL+K+I+E+ E I LP+ H E F+ LGI PKGVLLYGPPGTGKTL+ARA A Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF----- 527 T+ TF++++G +LVQ FIG+GA++VR+ F +A+E AP IIF+DEID+IG+ R Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264 Query: 528 -DSEVSGDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DSEV N + E+ + I + + NR DILD A Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNI-------KVIMATNRIDILDSA 304
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 169 bits (428), Expect = 7e-42 Identities = 97/227 (42%), Positives = 137/227 (60%), Gaps = 6/227 (2%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 V++K + V +D +++ P V + DSY + LP++ D V M V++ P Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y IGGL+K+I+E+ E I LP+ H E F+ LGI PKGVLLYGPPGTGKTL+ARA A Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF----- 527 T+ TF++++G +LVQ FIG+GA++VR+ F +A+E AP IIF+DEID+IG+ R Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264 Query: 528 -DSEVSGDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DSEV N + E+ + I + + NR DILD A Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNI-------KVIMATNRIDILDSA 304
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 169 bits (428), Expect = 7e-42 Identities = 97/227 (42%), Positives = 137/227 (60%), Gaps = 6/227 (2%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 V++K + V +D +++ P V + DSY + LP++ D V M V++ P Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y IGGL+K+I+E+ E I LP+ H E F+ LGI PKGVLLYGPPGTGKTL+ARA A Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF----- 527 T+ TF++++G +LVQ FIG+GA++VR+ F +A+E AP IIF+DEID+IG+ R Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264 Query: 528 -DSEVSGDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DSEV N + E+ + I + + NR DILD A Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNI-------KVIMATNRIDILDSA 304
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 169 bits (428), Expect = 7e-42 Identities = 97/227 (42%), Positives = 137/227 (60%), Gaps = 6/227 (2%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 V++K + V +D +++ P V + DSY + LP++ D V M V++ P Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y IGGL+K+I+E+ E I LP+ H E F+ LGI PKGVLLYGPPGTGKTL+ARA A Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF----- 527 T+ TF++++G +LVQ FIG+GA++VR+ F +A+E AP IIF+DEID+IG+ R Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264 Query: 528 -DSEVSGDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DSEV N + E+ + I + + NR DILD A Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNI-------KVIMATNRIDILDSA 304
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 169 bits (428), Expect = 7e-42 Identities = 97/227 (42%), Positives = 137/227 (60%), Gaps = 6/227 (2%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 V++K + V +D +++ P V + DSY + LP++ D V M V++ P Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y IGGL+K+I+E+ E I LP+ H E F+ LGI PKGVLLYGPPGTGKTL+ARA A Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF----- 527 T+ TF++++G +LVQ FIG+GA++VR+ F +A+E AP IIF+DEID+IG+ R Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264 Query: 528 -DSEVSGDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DSEV N + E+ + I + + NR DILD A Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNI-------KVIMATNRIDILDSA 304
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 153 bits (387), Expect(2) = 2e-41 Identities = 72/165 (43%), Positives = 109/165 (66%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 ++ + LK G V ++ + I+ LP E D V M ++ Y+D+GGL ++I+EL Sbjct: 104 INKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELR 163 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E + LP+ + E F+++GI PPKG LL+GPPGTGKTL+ARA A+Q + FLK+ +V Sbjct: 164 EVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDK 223 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 +IG+ A+++R+ F A++ PCI+F+DEIDAIG +RF S DR Sbjct: 224 YIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADR 268 Score = 35.8 bits (81), Expect(2) = 2e-41 Identities = 15/23 (65%), Positives = 20/23 (86%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSSDERIK 621 E+QRT++ELLNQLDGF S ++K Sbjct: 269 EIQRTLMELLNQLDGFDSLGKVK 291
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 167 bits (424), Expect = 2e-41 Identities = 92/209 (44%), Positives = 130/209 (62%), Gaps = 6/209 (2%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 +D +++ P V + +SY + LP++ D V M V++ P Y +GGL+K+I+E+ Sbjct: 102 IDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIK 161 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E I LP+ H E F LGI PKGVLLYGPPGTGKTL+ARA A T TF++++G +LVQ Sbjct: 162 EVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK 221 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF------DSEVSGDRRSATNYVGV 578 FIG+G+++VR+ F +A+E AP IIF+DEID+IG+ R DSEV N + Sbjct: 222 FIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDG 281 Query: 579 AESARWI*Q**ED*R**LQPNRADILDPA 665 E+ + I + + NR DILDPA Sbjct: 282 FEATKNI-------KVIMATNRIDILDPA 303
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 167 bits (424), Expect = 2e-41 Identities = 95/228 (41%), Positives = 138/228 (60%), Gaps = 7/228 (3%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 V++K + + + VD L P + +SY + LP++ D V M+V++ P Sbjct: 67 VLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIP 126 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y+ +GGL+K+I+E+ E I LP+ H E F+ LGI PKGVLLYGPPGTGKTL+ARA A Sbjct: 127 DSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 186 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR------ 524 T+ TF++++G +LVQ +IG+G+++VR+ F +A+E AP IIF+DEID+IG+ R Sbjct: 187 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSG 246 Query: 525 -FDSEVSGDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DSEV N + ES + I + + NR DILDPA Sbjct: 247 GGDSEVQRTMLELLNQLDGFESTKNI-------KVLMCTNRIDILDPA 287
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 167 bits (423), Expect = 3e-41 Identities = 96/226 (42%), Positives = 137/226 (60%), Gaps = 5/226 (2%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 V++K + V +D +++ P V + DSY + LP++ D V M V++ P Sbjct: 80 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 139 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y IGGL+K+I+E+ E I LP+ H E F+ LGI PKGVLLYGPPGTGKTL+ARA A Sbjct: 140 DSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVA 199 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTK-----RF 527 T+ TF++++G +LVQ FIG+GA++VR+ F +A+E AP IIF+DEID+IG++ Sbjct: 200 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGG 259 Query: 528 DSEVSGDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DSEV N + E+ + I + + NR DILD A Sbjct: 260 DSEVQRTMLELLNQLDGFEATKNI-------KVIMATNRIDILDSA 298
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 165 bits (417), Expect = 1e-40 Identities = 92/209 (44%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 VD +++ V + +SY + LP++ D V M V++ P Y +GGL+K+I+E+ Sbjct: 99 VDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIK 158 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E I LP+ H E F LGI PKGVLLYGPPGTGKTL+ARA A T TF++++G +LVQ Sbjct: 159 EVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK 218 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF------DSEVSGDRRSATNYVGV 578 FIG+G+++VR+ F +A+E AP IIF+DEID+IG+ R DSEV N + Sbjct: 219 FIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDG 278 Query: 579 AESARWI*Q**ED*R**LQPNRADILDPA 665 E+ + I + + NR DILDPA Sbjct: 279 FEATKNI-------KVIMATNRIDILDPA 300
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 162 bits (411), Expect = 6e-40 Identities = 92/227 (40%), Positives = 137/227 (60%), Gaps = 6/227 (2%) Frame = +3 Query: 3 VVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 182 V++K + V ++ +LK V + DSY++ L ++ D V M V++ P Sbjct: 84 VLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVP 143 Query: 183 TEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 Y+ +GGL K+I+E+ E I LP+ H E F+ LGI PKGV+LYGPPGTGKTL+ARA A Sbjct: 144 DSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 203 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF----- 527 T+ F++++G +LVQ +IG+G+++VR+ F +A+E AP IIF+DEID+IG+ R Sbjct: 204 HHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGG 263 Query: 528 -DSEVSGDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 DSEV N + E+++ I + + NR DILDPA Sbjct: 264 GDSEVQRTMLELLNQLDGFETSKNI-------KIIMATNRLDILDPA 303
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 150 bits (380), Expect(2) = 6e-39 Identities = 81/182 (44%), Positives = 113/182 (62%) Frame = +3 Query: 6 VLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 185 ++K S+ + V VD LK G V ++ + I+ LP E D V M E+ Sbjct: 118 IVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGE 177 Query: 186 EDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAA 365 ++ IGGL ++I+EL E I LP+ + E FQ++GI+PPKGVLLYGPPGTGKTL+A+A AA Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237 Query: 366 QTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 A F+ +V +IG+ A+++R+ F AKE PCIIF+DE+DAIG +RF S Sbjct: 238 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 297 Query: 546 DR 551 DR Sbjct: 298 DR 299 Score = 30.0 bits (66), Expect(2) = 6e-39 Identities = 11/18 (61%), Positives = 16/18 (88%) Frame = +1 Query: 553 EVQRTMLELLNQLDGFSS 606 E+QRT++ELL Q+DGF + Sbjct: 300 EIQRTLMELLTQMDGFDN 317
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 153 bits (386), Expect = 5e-37 Identities = 85/206 (41%), Positives = 122/206 (59%), Gaps = 3/206 (1%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELV 236 VD +L G V ++ + I+ LP E D V M +++ + +GGL ++I+EL Sbjct: 86 VDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELR 145 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E I LP+ + E F ++GI+PPKGVLLYGPPGTGKTL+ARA AA FLK+ +V Sbjct: 146 EVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDK 205 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR---RSATNYVGVAES 587 +IG+ A+++R+ F AKE PC+IF+DEIDAIG +RF S DR R+ + + Sbjct: 206 YIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 265 Query: 588 ARWI*Q**ED*R**LQPNRADILDPA 665 ++ Q + + NR D LDPA Sbjct: 266 FDYLGQ----TKIIMATNRPDTLDPA 287
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 141 bits (355), Expect = 2e-33 Identities = 76/158 (48%), Positives = 108/158 (68%), Gaps = 11/158 (6%) Frame = +3 Query: 108 SYLILDTLPSEYD--SRVKAMEVDEKPTED---------YNDIGGLEKEIQELVEAIVLP 254 +++I T PS +R A+E+ EKP E+ Y DIGGL++E++ + E I LP Sbjct: 142 TFVITATRPSGVVVVTRNTAIELKEKPAEEVKRAVPDVTYEDIGGLKRELRLVREMIELP 201 Query: 255 MTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGA 434 + H E FQ+LGI PPKGVLLYGPPGTGKTL+A+A A + +A F+ ++GP+++ + G+ Sbjct: 202 LKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESE 261 Query: 435 KLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 + +R+ FE AKE AP IIFIDEID+I KR EV+G+ Sbjct: 262 QRLREIFEEAKENAPSIIFIDEIDSIAPKR--EEVTGE 297 Score = 126 bits (317), Expect = 5e-29 Identities = 56/117 (47%), Positives = 84/117 (71%) Frame = +3 Query: 174 EKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMAR 353 E P + DIGGLE QEL+EA+ P+ + E F+ I+PP+G+LL+GPPGTGKTL+A+ Sbjct: 448 EVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAK 507 Query: 354 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 A A ++NA F+ + GP+L+ ++G+ K VR+ F A++ APC+IF DEID++ +R Sbjct: 508 AVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRR 564
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 137 bits (345), Expect = 3e-32 Identities = 65/121 (53%), Positives = 89/121 (73%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 371 Y DIGGLE EIQ + E + LPM H + FQKLGI PP+GVLL+GPPGTGKTL+A+A A +T Sbjct: 188 YEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANET 247 Query: 372 NATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 +A+F +AGP+++ + G+ + +R+ FE AK+ +P IIFIDE+D+I KR D +R Sbjct: 248 SASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTGEVER 307 Query: 552 R 554 R Sbjct: 308 R 308 Score = 119 bits (298), Expect = 8e-27 Identities = 62/165 (37%), Positives = 99/165 (60%), Gaps = 2/165 (1%) Frame = +3 Query: 36 FLPVIGLVDPDNLKPG--DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGG 209 +LP I L D +++ P D + V ++ + SE + + E P ++D+GG Sbjct: 411 YLPEIDL-DEEDIPPSLIDRMIVKREDF---KGALSEVEPSAMREVLVELPKITWDDVGG 466 Query: 210 LEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLK 389 L + + E++ P+ E+F ++G+ PP GVLLYGPPGTGKTLMA+A A +TNA F+ Sbjct: 467 LTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFIS 526 Query: 390 LAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 + GPQL+ ++G+ K +R F A++ AP +IF DE+D++ R Sbjct: 527 VRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSLAPGR 571
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 135 bits (340), Expect = 1e-31 Identities = 62/117 (52%), Positives = 85/117 (72%) Frame = +3 Query: 174 EKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMAR 353 E P + DIGGLE+ QEL EA+ P+ KE F+K+G+RPPKGVLL+GPPGTGKTL+A+ Sbjct: 445 EVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAK 504 Query: 354 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 A A ++ A F+ + GP++ ++G+ K +R+ F A++ APCIIF DEIDAI KR Sbjct: 505 AVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKR 561 Score = 133 bits (335), Expect = 4e-31 Identities = 70/142 (49%), Positives = 95/142 (66%) Frame = +3 Query: 129 LPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGV 308 L E S +K +V P Y DIGGL++E++++ E I LPM H E F+KLGI PPKGV Sbjct: 160 LKEEPVSEIKETKV---PDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGV 216 Query: 309 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCII 488 LL GPPGTGKTL+A+A A + A F + GP+++ ++G+ + +R FE A+E AP II Sbjct: 217 LLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSII 276 Query: 489 FIDEIDAIGTKRFDSEVSGDRR 554 FIDEIDAI KR ++ +RR Sbjct: 277 FIDEIDAIAPKRDEATGEVERR 298
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 135 bits (339), Expect = 1e-31 Identities = 74/181 (40%), Positives = 112/181 (61%), Gaps = 14/181 (7%) Frame = +3 Query: 54 LVDPDNLK-PG-DLVGVNKDSYLILDTLPSEYDSRV---KAMEVDEKPTED--------- 191 +++ DN+ PG L G + ++ TLPS+ + +E+ E+P + Sbjct: 129 MLEQDNISVPGLTLAGQTGLLFKVVKTLPSKVPVEIGEETKIEIREEPASEVLEEVSRIS 188 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 371 Y DIGGL +++ ++ E I LP+ H E F++LGI PPKGV+LYGPPGTGKTL+ARA A ++ Sbjct: 189 YEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANES 248 Query: 372 NATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 A FL + GP+++ + G + +R+ F A+E AP IIFIDEID+I KR + + +R Sbjct: 249 GANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVER 308 Query: 552 R 554 R Sbjct: 309 R 309 Score = 127 bits (320), Expect = 2e-29 Identities = 68/170 (40%), Positives = 108/170 (63%) Frame = +3 Query: 36 FLPVIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 215 +LP I L P + + + V +D + + L S S ++ + V E P ++DIGGLE Sbjct: 417 YLPEIDLDKPIPTEILEKMVVTEDDFK--NALKSIEPSSLREVMV-EVPNVHWDDIGGLE 473 Query: 216 KEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 395 +E+ E + LP+ + F++LGIRP KG LLYGPPG GKTL+A+A A ++NA F+ + Sbjct: 474 DVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIK 533 Query: 396 GPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 GP+++ ++G+ K +R+ F+ AK+ AP I+F+DEID+I +R + SG Sbjct: 534 GPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSG 583
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 131 bits (329), Expect = 2e-30 Identities = 71/141 (50%), Positives = 93/141 (65%), Gaps = 2/141 (1%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 SR K ++EKP + D+ G+E E++E V+ I+ + +FQKLG RPPKGVLLYG P Sbjct: 140 SRAKVY-IEEKPKVTFKDVAGIE-EVKEEVKEIIEYLKDPVKFQKLGGRPPKGVLLYGEP 197 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 G GKTL+A+A A + + F+ ++G V+MF+G GA VRD FE AK+ APCIIFIDEID Sbjct: 198 GVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEID 257 Query: 507 AIGTKRFDSEVSG--DRRSAT 563 A+G R V G D R T Sbjct: 258 AVGRARGAIPVGGGHDEREQT 278
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 129 bits (323), Expect = 1e-29 Identities = 68/149 (45%), Positives = 97/149 (65%), Gaps = 11/149 (7%) Frame = +3 Query: 117 ILDTLPSEYDSRVKA--MEVDEKPTED---------YNDIGGLEKEIQELVEAIVLPMTH 263 +++T PS Y + +E+ E+P ++ + DIG LE+ Q++ E + PM H Sbjct: 175 VVNTQPSNYVYVTGSTNIEIREEPVKESSLAYPKVSWEDIGDLEEAKQKIREIVEWPMRH 234 Query: 264 KEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 443 E FQ+LGI PPKG+LLYGPPGTGKTL+ARA A + A F+ + GP+++ F G+ + + Sbjct: 235 PELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRI 294 Query: 444 RDAFELAKEKAPCIIFIDEIDAIGTKRFD 530 R+ F+ A+E AP IIFIDEIDAI KR D Sbjct: 295 REIFKEAEENAPSIIFIDEIDAIAPKRED 323 Score = 122 bits (306), Expect = 1e-27 Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 5/187 (2%) Frame = +3 Query: 120 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP 299 L+ L S S ++ + V E P ++NDIGGL+ Q+L EA+ P+ E F K G+ PP Sbjct: 463 LNALKSIQPSLLREVYV-EVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPP 521 Query: 300 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAP 479 KG+LL+GPPGTGKT++A+A A ++ A F+ + GP+++ ++G+ K +R+ F A++ AP Sbjct: 522 KGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAP 581 Query: 480 CIIFIDEIDAIGTKRFDSEVSGDRRSATNYV-----GVAESARWI*Q**ED*R**LQPNR 644 +IF DEID+I R S SG N + G+ + + NR Sbjct: 582 TVIFFDEIDSIAPIRGLSTDSGVTERIVNQLLAEMDGIVPLNKVVII--------AATNR 633 Query: 645 ADILDPA 665 DILDPA Sbjct: 634 PDILDPA 640
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 128 bits (322), Expect = 1e-29 Identities = 68/177 (38%), Positives = 108/177 (61%), Gaps = 16/177 (9%) Frame = +3 Query: 72 LKPGDLV----GVNKDSYLILDTLPSEYDSRVKAMEV----------DEKPTED--YNDI 203 ++ GDL G+ + +++T P+EY E+ DE+ +D Y+D+ Sbjct: 150 VRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLDDVGYDDV 209 Query: 204 GGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATF 383 GG+ K++ ++ E + LP+ H + F+ +G++PPKG+LLYGPPG+GKTL+ARA A +T A F Sbjct: 210 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 269 Query: 384 LKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRR 554 + GP+++ G+ +R AFE A++ AP IIFIDEID+I KR + +RR Sbjct: 270 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERR 326 Score = 126 bits (316), Expect = 7e-29 Identities = 57/119 (47%), Positives = 82/119 (68%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLM 347 V E P +NDIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKTL+ Sbjct: 471 VVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530 Query: 348 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 A+A A + A F+ + GP+L+ M+ G+ VR+ F+ A++ APC++F DE+D+I T+R Sbjct: 531 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR 589
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 127 bits (318), Expect = 4e-29 Identities = 67/177 (37%), Positives = 108/177 (61%), Gaps = 16/177 (9%) Frame = +3 Query: 72 LKPGDLV----GVNKDSYLILDTLPSEYDSRVKAMEV----------DEKPTED--YNDI 203 ++ GDL G+ + +++T P+EY E+ DE+ ++ Y+D+ Sbjct: 151 VRKGDLFLVRGGMRSIEFKVIETDPAEYCVVAPDTEIFCEGEPIKREDEERLDEVGYDDV 210 Query: 204 GGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATF 383 GG+ K++ ++ E + LP+ H + F+ +G++PPKG+LLYGPPG+GKTL+ARA A +T A F Sbjct: 211 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 270 Query: 384 LKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRR 554 + GP+++ G+ +R AFE A++ AP IIFIDEID+I KR + +RR Sbjct: 271 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERR 327 Score = 125 bits (314), Expect = 1e-28 Identities = 61/135 (45%), Positives = 88/135 (65%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLM 347 V E P + DIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKTL+ Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531 Query: 348 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF 527 A+A A + A F+ + GP+L+ M+ G+ VR+ F+ A++ APC++F DE+D+I T+R Sbjct: 532 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 591 Query: 528 DSEVSGDRRSATNYV 572 +S GD A + V Sbjct: 592 NS--VGDAGGAADRV 604
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 127 bits (318), Expect = 4e-29 Identities = 76/166 (45%), Positives = 98/166 (59%), Gaps = 1/166 (0%) Frame = +3 Query: 171 DEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMA 350 +EK + D+ G ++E QELVE + + +F +LG R PKGVLL GPPGTGKTL+A Sbjct: 153 EEKKRVKFKDVAGADEEKQELVEVVEF-LKDPRKFAELGARIPKGVLLVGPPGTGKTLLA 211 Query: 351 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFD 530 +ACA + F ++G V+MF+G GA VRD FE AK+ APC+IFIDEIDA+G +R Sbjct: 212 KACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGA 271 Query: 531 SEVSG-DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 G D R T + E + E NRADILDPA Sbjct: 272 GLGGGHDEREQTLNQLLVEMDGFSAN--EGIIIIAATNRADILDPA 315
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 127 bits (318), Expect = 4e-29 Identities = 67/177 (37%), Positives = 108/177 (61%), Gaps = 16/177 (9%) Frame = +3 Query: 72 LKPGDLV----GVNKDSYLILDTLPSEYDSRVKAMEV----------DEKPTED--YNDI 203 ++ GDL G+ + +++T P+EY E+ DE+ ++ Y+D+ Sbjct: 150 VRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDV 209 Query: 204 GGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATF 383 GG+ K++ ++ E + LP+ H + F+ +G++PPKG+LLYGPPG+GKTL+ARA A +T A F Sbjct: 210 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 269 Query: 384 LKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRR 554 + GP+++ G+ +R AFE A++ AP IIFIDEID+I KR + +RR Sbjct: 270 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERR 326 Score = 126 bits (316), Expect = 7e-29 Identities = 61/135 (45%), Positives = 89/135 (65%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLM 347 V E P + DIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKTL+ Sbjct: 471 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530 Query: 348 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF 527 A+A A + A F+ + GP+L+ M+ G+ VR+ F+ A++ APC++F DE+D+I T+R Sbjct: 531 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 590 Query: 528 DSEVSGDRRSATNYV 572 +S +GD A + V Sbjct: 591 NS--AGDAGGAADRV 603
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 126 bits (316), Expect = 7e-29 Identities = 67/177 (37%), Positives = 107/177 (60%), Gaps = 16/177 (9%) Frame = +3 Query: 72 LKPGDLV----GVNKDSYLILDTLPSEYDSRVKAMEV----------DEKPTED--YNDI 203 ++ GDL G+ + +++T P EY E+ DE+ ++ Y+D+ Sbjct: 151 VRKGDLFLVRGGMRSVEFKVVETDPGEYCVVAPDTEIFCEGEPLKREDEERLDEVGYDDV 210 Query: 204 GGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATF 383 GG+ K++ ++ E + LP+ H + F+ +G++PPKG+LLYGPPG+GKTL+ARA A +T A F Sbjct: 211 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 270 Query: 384 LKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRR 554 + GP+++ G+ +R AFE A++ AP IIFIDEID+I KR + +RR Sbjct: 271 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERR 327 Score = 124 bits (312), Expect = 2e-28 Identities = 61/135 (45%), Positives = 87/135 (64%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLM 347 V E P + DIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKTL+ Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531 Query: 348 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF 527 A+A A + A F+ + GP+L+ M+ G+ VR+ F+ A++ APC++F DE+D+I T+R Sbjct: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 591 Query: 528 DSEVSGDRRSATNYV 572 S GD A + V Sbjct: 592 SS--VGDAGGAADRV 604
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 125 bits (315), Expect = 9e-29 Identities = 64/166 (38%), Positives = 102/166 (61%), Gaps = 12/166 (7%) Frame = +3 Query: 93 GVNKDSYLILDTLPSEYDSRVKAMEV----------DEKPTED--YNDIGGLEKEIQELV 236 G+ + +++T P EY E+ DE+ ++ Y+D+GG+ K++ ++ Sbjct: 162 GMRSVEFKVIETDPGEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIR 221 Query: 237 EAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 416 E + LP+ H + F+ +G++PPKG+LLYGPPG+GKTL+ARA A +T A F + GP+++ Sbjct: 222 ELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSK 281 Query: 417 FIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRR 554 G+ +R AFE A++ AP IIFIDEID+I KR + +RR Sbjct: 282 LAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERR 327 Score = 123 bits (308), Expect = 6e-28 Identities = 61/135 (45%), Positives = 87/135 (64%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLM 347 V E P + DIGGLE +EL E + P+ E+F+K G+ P KGVL YGPPG GKTL+ Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531 Query: 348 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF 527 A+A A + A F+ + GP+L+ M+ G+ VR+ F+ A++ APC++F DE+D+I T+R Sbjct: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 591 Query: 528 DSEVSGDRRSATNYV 572 S SGD A + V Sbjct: 592 SS--SGDAGGAADRV 604
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 125 bits (313), Expect = 1e-28 Identities = 67/178 (37%), Positives = 104/178 (58%), Gaps = 17/178 (9%) Frame = +3 Query: 72 LKPGDLV----GVNKDSYLILDTLPSEY------------DSRVKAMEVDEKPTE-DYND 200 ++ GD+ G+ + +++T PS Y +K + +E E Y+D Sbjct: 146 IRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDD 205 Query: 201 IGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNAT 380 IGG K++ ++ E + LP+ H F+ +G++PP+G+LLYGPPGTGKTL+ARA A +T A Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265 Query: 381 FLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRR 554 F + GP+++ G+ +R AFE A++ AP IIFIDE+DAI KR + +RR Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERR 323 Score = 116 bits (291), Expect = 5e-26 Identities = 54/119 (45%), Positives = 78/119 (65%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLM 347 V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+ Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527 Query: 348 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 A+A A + A F+ + GP+L+ M+ G+ VR+ F+ A++ APC++F DE+D+I R Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 125 bits (313), Expect = 1e-28 Identities = 67/178 (37%), Positives = 104/178 (58%), Gaps = 17/178 (9%) Frame = +3 Query: 72 LKPGDLV----GVNKDSYLILDTLPSEY------------DSRVKAMEVDEKPTE-DYND 200 ++ GD+ G+ + +++T PS Y +K + +E E Y+D Sbjct: 145 IRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDD 204 Query: 201 IGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNAT 380 IGG K++ ++ E + LP+ H F+ +G++PP+G+LLYGPPGTGKTL+ARA A +T A Sbjct: 205 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 264 Query: 381 FLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRR 554 F + GP+++ G+ +R AFE A++ AP IIFIDE+DAI KR + +RR Sbjct: 265 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERR 322 Score = 116 bits (291), Expect = 5e-26 Identities = 54/119 (45%), Positives = 78/119 (65%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLM 347 V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+ Sbjct: 467 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 526 Query: 348 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 A+A A + A F+ + GP+L+ M+ G+ VR+ F+ A++ APC++F DE+D+I R Sbjct: 527 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 585
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 125 bits (313), Expect = 1e-28 Identities = 67/178 (37%), Positives = 104/178 (58%), Gaps = 17/178 (9%) Frame = +3 Query: 72 LKPGDLV----GVNKDSYLILDTLPSEY------------DSRVKAMEVDEKPTE-DYND 200 ++ GD+ G+ + +++T PS Y +K + +E E Y+D Sbjct: 145 IRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDD 204 Query: 201 IGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNAT 380 IGG K++ ++ E + LP+ H F+ +G++PP+G+LLYGPPGTGKTL+ARA A +T A Sbjct: 205 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 264 Query: 381 FLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRR 554 F + GP+++ G+ +R AFE A++ AP IIFIDE+DAI KR + +RR Sbjct: 265 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERR 322 Score = 115 bits (288), Expect = 1e-25 Identities = 53/119 (44%), Positives = 78/119 (65%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLM 347 V E P + DIGGLE +EL + + P+ H ++F K G+ P KGVL YGPPG GKTL+ Sbjct: 467 VVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 526 Query: 348 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 A+A A + A F+ + GP+L+ M+ G+ VR+ F+ A++ APC++F DE+D+I R Sbjct: 527 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 585
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 125 bits (313), Expect = 1e-28 Identities = 67/178 (37%), Positives = 104/178 (58%), Gaps = 17/178 (9%) Frame = +3 Query: 72 LKPGDLV----GVNKDSYLILDTLPSEY------------DSRVKAMEVDEKPTE-DYND 200 ++ GD+ G+ + +++T PS Y +K + +E E Y+D Sbjct: 145 IRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDD 204 Query: 201 IGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNAT 380 IGG K++ ++ E + LP+ H F+ +G++PP+G+LLYGPPGTGKTL+ARA A +T A Sbjct: 205 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 264 Query: 381 FLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRR 554 F + GP+++ G+ +R AFE A++ AP IIFIDE+DAI KR + +RR Sbjct: 265 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERR 322 Score = 116 bits (291), Expect = 5e-26 Identities = 54/119 (45%), Positives = 78/119 (65%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLM 347 V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+ Sbjct: 467 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 526 Query: 348 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 A+A A + A F+ + GP+L+ M+ G+ VR+ F+ A++ APC++F DE+D+I R Sbjct: 527 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 585
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 125 bits (313), Expect = 1e-28 Identities = 67/167 (40%), Positives = 99/167 (59%), Gaps = 13/167 (7%) Frame = +3 Query: 93 GVNKDSYLILDTLPSEY----DSRVKAMEVDEKPTED---------YNDIGGLEKEIQEL 233 G+ + + ++D P EY + E + ED Y+DIGG K++ ++ Sbjct: 167 GMRQVEFKVVDVEPEEYAVVAQDTIIHWEGEPINREDEENNMNEVGYDDIGGCRKQMAQI 226 Query: 234 VEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQ 413 E + LP+ H + F+ +GI+PP+GVL+YGPPGTGKTLMARA A +T A F + GP+++ Sbjct: 227 REMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMS 286 Query: 414 MFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRR 554 G+ +R AFE A++ AP IIFIDEID+I KR + +RR Sbjct: 287 KMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVERR 333 Score = 118 bits (295), Expect = 2e-26 Identities = 62/163 (38%), Positives = 99/163 (60%) Frame = +3 Query: 84 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTH 263 D +GV D++ L + S ++ V E ++D+GGL++ +EL E + P+ H Sbjct: 453 DSLGVTMDNFRF--ALGNSNPSALRETVV-ESVNVTWDDVGGLDEIKEELKETVEYPVLH 509 Query: 264 KEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 443 +Q+ K G+ P KGVL YGPPGTGKTL+A+A A + +A F+ + GP+L+ M+ G+ + Sbjct: 510 PDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNI 569 Query: 444 RDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRRSATNYV 572 RD F+ A+ AP ++F+DE+D+I R S GD A++ V Sbjct: 570 RDIFDKARAAAPTVVFLDELDSIAKARGGS--LGDAGGASDRV 610
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 124 bits (312), Expect = 2e-28 Identities = 66/178 (37%), Positives = 104/178 (58%), Gaps = 17/178 (9%) Frame = +3 Query: 72 LKPGDLV----GVNKDSYLILDTLPSEY------------DSRVKAMEVDEKPTE-DYND 200 ++ GD+ G+ + +++T PS Y +K + +E E Y+D Sbjct: 145 IRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDD 204 Query: 201 IGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNAT 380 +GG K++ ++ E + LP+ H F+ +G++PP+G+LLYGPPGTGKTL+ARA A +T A Sbjct: 205 VGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 264 Query: 381 FLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRR 554 F + GP+++ G+ +R AFE A++ AP IIFIDE+DAI KR + +RR Sbjct: 265 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERR 322 Score = 116 bits (291), Expect = 5e-26 Identities = 54/119 (45%), Positives = 78/119 (65%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLM 347 V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+ Sbjct: 467 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 526 Query: 348 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 A+A A + A F+ + GP+L+ M+ G+ VR+ F+ A++ APC++F DE+D+I R Sbjct: 527 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 585
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 124 bits (312), Expect = 2e-28 Identities = 78/174 (44%), Positives = 101/174 (58%), Gaps = 1/174 (0%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 S+ K + D+K + + D+ G ++E QELVE + + +F +G R PKGVLL GPP Sbjct: 151 SKAKMVNEDKKKAK-FKDVAGADEEKQELVEVVEF-LKDPRKFSAIGARIPKGVLLVGPP 208 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 GTGKTL+ARA A + F ++G V+MF+G GA VRD FE AK+ APCIIFIDEID Sbjct: 209 GTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEID 268 Query: 507 AIGTKRFDSEVSG-DRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 A+G +R G D R T + E + E NRADILDPA Sbjct: 269 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSAN--EGIIIIAATNRADILDPA 320
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 122 bits (307), Expect = 7e-28 Identities = 56/121 (46%), Positives = 84/121 (69%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 371 Y+DIGG +++ ++ E + LP+ H + F+ +GI+PP+G+L+YGPPGTGKTLMARA A +T Sbjct: 223 YDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANET 282 Query: 372 NATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 A F + GP+++ G+ +R AFE A++ +P IIFIDEID+I KR + +R Sbjct: 283 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVER 342 Query: 552 R 554 R Sbjct: 343 R 343 Score = 122 bits (305), Expect = 1e-27 Identities = 61/147 (41%), Positives = 94/147 (63%) Frame = +3 Query: 84 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTH 263 D +GV D++ L S S ++ V E P + DIGGLE+ +EL E + +P+ + Sbjct: 463 DSLGVTMDNFRF--ALGSSNPSALRETVV-EVPNVRWEDIGGLEEVKRELRETVQMPVMY 519 Query: 264 KEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 443 E+F + G+ P KGVL +GPPGTGKTL+A+A A + +A F+ + GP+L+ M+ G+ V Sbjct: 520 AEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNV 579 Query: 444 RDAFELAKEKAPCIIFIDEIDAIGTKR 524 RD F+ A+ APC++F+DE+D+I R Sbjct: 580 RDIFDKARAAAPCVVFLDELDSIAKAR 606
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 121 bits (304), Expect = 2e-27 Identities = 61/126 (48%), Positives = 85/126 (67%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 SR K + D P + D+ G+++ ++EL E I + + ++Q LG + PKGVLLYGPP Sbjct: 148 SRAKQLSKD-MPKTTFADVAGVDEAVEELYE-IKDFLQNPSRYQALGAKIPKGVLLYGPP 205 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 GTGKTL+ARA A + F ++G V+MF+G GA VRD FE AK+ +PCIIF+DEID Sbjct: 206 GTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEID 265 Query: 507 AIGTKR 524 A+G +R Sbjct: 266 AVGRQR 271
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 121 bits (304), Expect = 2e-27 Identities = 61/126 (48%), Positives = 85/126 (67%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 SR K + D P + D+ G+++ ++EL E I + + ++Q LG + PKGVLLYGPP Sbjct: 148 SRAKQLSKD-MPKTTFADVAGVDEAVEELYE-IKDFLQNPSRYQALGAKIPKGVLLYGPP 205 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 GTGKTL+ARA A + F ++G V+MF+G GA VRD FE AK+ +PCIIF+DEID Sbjct: 206 GTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEID 265 Query: 507 AIGTKR 524 A+G +R Sbjct: 266 AVGRQR 271
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 120 bits (300), Expect = 5e-27 Identities = 58/158 (36%), Positives = 97/158 (61%), Gaps = 1/158 (0%) Frame = +3 Query: 123 DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP 299 DT+ +K E +E + Y+D+GG+ K++ ++ E + LP+ H + F+ +GI+PP Sbjct: 185 DTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPP 244 Query: 300 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAP 479 +G+LL+GPPGTGKTL+ARA A +T + F + GP+++ G+ +R AFE ++ P Sbjct: 245 RGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQP 304 Query: 480 CIIFIDEIDAIGTKRFDSEVSGDRRSATNYVGVAESAR 593 I+FIDEIDAI KR + +RR + + + + + Sbjct: 305 AILFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVK 342 Score = 118 bits (295), Expect = 2e-26 Identities = 57/135 (42%), Positives = 85/135 (62%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLM 347 V E P ++DIGGL+ +EL E + P+ H E++ K G++P +GVL YGPPG GKTL+ Sbjct: 474 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 533 Query: 348 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF 527 A+A A + A F+ + GP+L+ M+ G+ VRD F+ A+ APC++F DE+D+I R Sbjct: 534 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR- 592 Query: 528 DSEVSGDRRSATNYV 572 GD A++ V Sbjct: 593 GGGAGGDGGGASDRV 607
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 119 bits (298), Expect = 8e-27 Identities = 61/117 (52%), Positives = 81/117 (69%) Frame = +3 Query: 174 EKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMAR 353 EKP +ND+ G E+ +E+VE IV + + E++ LG + PKGVLL GPPGTGKTL+A+ Sbjct: 163 EKPNVRFNDMAGNEEAKEEVVE-IVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAK 221 Query: 354 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 A A + + F + G ++MF+G GA VRD FE AK++AP IIFIDEIDAIG R Sbjct: 222 AVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSR 278
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 119 bits (298), Expect = 8e-27 Identities = 61/117 (52%), Positives = 81/117 (69%) Frame = +3 Query: 174 EKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMAR 353 EKP +ND+ G E+ +E+VE IV + + E++ LG + PKGVLL GPPGTGKTL+A+ Sbjct: 163 EKPNVRFNDMAGNEEAKEEVVE-IVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAK 221 Query: 354 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 A A + + F + G ++MF+G GA VRD FE AK++AP IIFIDEIDAIG R Sbjct: 222 AVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSR 278
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 119 bits (297), Expect = 1e-26 Identities = 60/126 (47%), Positives = 85/126 (67%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 SR K + D P + D+ G+++ ++EL E I + + ++Q LG + PKGVLLYGPP Sbjct: 148 SRAKQLSKD-MPKTTFADVAGVDEAVEELYE-IKDFLQNPCRYQTLGAKIPKGVLLYGPP 205 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 GTGKTL+ARA A + F ++G V+MF+G GA VRD F+ AK+ +PCIIF+DEID Sbjct: 206 GTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEID 265 Query: 507 AIGTKR 524 A+G +R Sbjct: 266 AVGRQR 271
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 119 bits (297), Expect = 1e-26 Identities = 58/111 (52%), Positives = 79/111 (71%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 371 + D+ G+E+ +EL E IV + +F +G PKGVLL GPPGTGKTL+A+A A + Sbjct: 170 FEDVAGIEEAKEELQE-IVAFLKDSRKFTNVGATIPKGVLLVGPPGTGKTLLAKAIAGEA 228 Query: 372 NATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 +A F ++G + V+MF+G GA VRD F+ AKEKAPCI+FIDEIDA+G +R Sbjct: 229 SAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAVGRQR 279
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 118 bits (296), Expect = 1e-26 Identities = 56/120 (46%), Positives = 82/120 (68%) Frame = +3 Query: 165 EVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTL 344 ++D K ++D+ G+++ +EL E + + E+F +G + PKGVLL GPPGTGKTL Sbjct: 162 QMDAKTGVMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTL 220 Query: 345 MARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 +A+A A + F ++G + V+MF+G GA VRD F+ AKE APC+IFIDEIDA+G +R Sbjct: 221 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQR 280
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 118 bits (296), Expect = 1e-26 Identities = 63/169 (37%), Positives = 101/169 (59%), Gaps = 19/169 (11%) Frame = +3 Query: 63 PDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEA 242 P L+PGD + V+ + + +P + V+ + ++E P Y DIGGL ++I+++ +A Sbjct: 211 PRKLRPGDSLLVDPKAGYAFERVPK---AEVEDLVLEEVPDVSYQDIGGLTRQIEQIRDA 267 Query: 243 IVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARAC---------------AAQTNA 377 + LP HKE +++ +RPPKGVLLYGPPG GKTL+A+A A + + Sbjct: 268 VELPFLHKELYREYALRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAREAKS 327 Query: 378 TFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKA----PCIIFIDEIDAI 512 FL + GP+L+ F+G+ + +R F+ A+EKA P I+F DE+D+I Sbjct: 328 YFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSI 376
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 118 bits (296), Expect = 1e-26 Identities = 60/118 (50%), Positives = 78/118 (66%) Frame = +3 Query: 171 DEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMA 350 D+ P + D+ G+++ +EL E IV + +FQKLG + PKG LL GPPGTGKTL+A Sbjct: 147 DKGPKITFKDVAGIDEAKEELTE-IVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLA 205 Query: 351 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 +A A + N F ++G V+MF+G GA VRD FE K APCIIFIDEIDA+G R Sbjct: 206 KAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHR 263
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 118 bits (296), Expect = 1e-26 Identities = 60/118 (50%), Positives = 78/118 (66%) Frame = +3 Query: 171 DEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMA 350 D+ P + D+ G+++ +EL E IV + +FQKLG + PKG LL GPPGTGKTL+A Sbjct: 147 DKGPKITFKDVAGIDEAKEELTE-IVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLA 205 Query: 351 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 +A A + N F ++G V+MF+G GA VRD FE K APCIIFIDEIDA+G R Sbjct: 206 KAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHR 263
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 118 bits (295), Expect = 2e-26 Identities = 63/169 (37%), Positives = 101/169 (59%), Gaps = 19/169 (11%) Frame = +3 Query: 63 PDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEA 242 P L+PGD + V+ + + +P + V+ + ++E P Y DIGGL ++I+++ +A Sbjct: 211 PRKLRPGDSLLVDTKAGYAFERIPK---AEVEDLVLEEVPDVSYADIGGLSRQIEQIRDA 267 Query: 243 IVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARAC---------------AAQTNA 377 + LP HKE +++ +RPPKGVLLYGPPG GKTL+A+A A + + Sbjct: 268 VELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKS 327 Query: 378 TFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKA----PCIIFIDEIDAI 512 FL + GP+L+ F+G+ + +R F+ A+EKA P I+F DE+D+I Sbjct: 328 YFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSI 376
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 118 bits (295), Expect = 2e-26 Identities = 63/169 (37%), Positives = 101/169 (59%), Gaps = 19/169 (11%) Frame = +3 Query: 63 PDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEA 242 P L+PGD + V+ + + +P + V+ + ++E P Y DIGGL ++I+++ +A Sbjct: 211 PRKLRPGDSLLVDTKAGYAFERIPK---AEVEDLVLEEVPDVSYADIGGLSRQIEQIRDA 267 Query: 243 IVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARAC---------------AAQTNA 377 + LP HKE +++ +RPPKGVLLYGPPG GKTL+A+A A + + Sbjct: 268 VELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKS 327 Query: 378 TFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKA----PCIIFIDEIDAI 512 FL + GP+L+ F+G+ + +R F+ A+EKA P I+F DE+D+I Sbjct: 328 YFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSI 376
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 118 bits (295), Expect = 2e-26 Identities = 58/135 (42%), Positives = 85/135 (62%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLM 347 V E P ++DIGGL+ +EL E + P+ H E++ K G++P +GVL YGPPG GKTL+ Sbjct: 473 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 532 Query: 348 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF 527 A+A A + A F+ + GP+L+ M+ G+ VRD F+ A+ APC++F DE+D+I R Sbjct: 533 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 592 Query: 528 DSEVSGDRRSATNYV 572 S GD A + V Sbjct: 593 GS--VGDAGGAADRV 605 Score = 118 bits (295), Expect = 2e-26 Identities = 56/135 (41%), Positives = 88/135 (65%), Gaps = 1/135 (0%) Frame = +3 Query: 123 DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP 299 DT+ +K E +E E Y+D+GG+ K++ ++ E + LP+ H + F+ +G++PP Sbjct: 184 DTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPP 243 Query: 300 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAP 479 +G+LL+GPPGTGKTL+ARA A +T A F + GP+++ G+ +R AF ++ +P Sbjct: 244 RGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSP 303 Query: 480 CIIFIDEIDAIGTKR 524 I+FIDEIDAI KR Sbjct: 304 AILFIDEIDAIAPKR 318
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 117 bits (294), Expect = 2e-26 Identities = 59/117 (50%), Positives = 82/117 (70%) Frame = +3 Query: 174 EKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMAR 353 EKP +ND+ G E+ +E+VE IV + + +++ LG + PKGVLL GPPGTGKTL+A+ Sbjct: 169 EKPKVRFNDMAGNEEAKEEVVE-IVDFLKYPDRYASLGAKIPKGVLLVGPPGTGKTLLAK 227 Query: 354 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 A A + + F + G ++MF+G GA VRD F++AK++AP IIFIDEIDAIG R Sbjct: 228 AVAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEIDAIGKSR 284
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 117 bits (293), Expect = 3e-26 Identities = 54/125 (43%), Positives = 80/125 (64%) Frame = +3 Query: 180 PTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARAC 359 P + DIG LE EL+ AI+ P+ + +QF+ LG+ P G+LL GPPG GKTL+A+A Sbjct: 575 PNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAV 634 Query: 360 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEV 539 A ++ F+ + GP+L+ M++G+ + VR F+ AK APC+IF DE+DA+ +R D E Sbjct: 635 ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET 694 Query: 540 SGDRR 554 R Sbjct: 695 GASVR 699 Score = 106 bits (264), Expect = 7e-23 Identities = 52/121 (42%), Positives = 79/121 (65%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 371 + D+GG + ++E+ + ++ M H E +Q LG+ PP+GVLL+GPPG GKTL+A A A + Sbjct: 263 FEDVGGNDATLKEVCKMLI-HMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGEL 321 Query: 372 NATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 + LK+A P++V G+ + +R+ F+ A APCI+FIDEIDAI KR + +R Sbjct: 322 DLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDMER 381 Query: 552 R 554 R Sbjct: 382 R 382
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 117 bits (292), Expect = 4e-26 Identities = 56/120 (46%), Positives = 82/120 (68%) Frame = +3 Query: 165 EVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTL 344 +++ K +ND+ G++ E +E E +V + E+F +G + PKGVLL GPPGTGKTL Sbjct: 163 QMEAKTGVTFNDVAGVD-EAKEEFEEVVSFLKKPERFTAVGAKIPKGVLLVGPPGTGKTL 221 Query: 345 MARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 +A+A A + F ++G + V+MF+G GA VRD F+ AKE +PCI+FIDEIDA+G +R Sbjct: 222 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVFIDEIDAVGRQR 281
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 117 bits (292), Expect = 4e-26 Identities = 55/120 (45%), Positives = 80/120 (66%) Frame = +3 Query: 165 EVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTL 344 +++ K +ND+ G+E+ +E E + + E F +G + PKGVLL GPPGTGKTL Sbjct: 163 QMEAKTGVVFNDVAGVEEAKEEFQEVVTF-LKQPESFTAVGAKIPKGVLLVGPPGTGKTL 221 Query: 345 MARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 +A+A A + F ++G + V+MF+G GA VRD F+ AK+ APCI+FIDEIDA+G +R Sbjct: 222 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDAVGRQR 281
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 117 bits (292), Expect = 4e-26 Identities = 55/125 (44%), Positives = 80/125 (64%) Frame = +3 Query: 180 PTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARAC 359 P + DIG LE +EL AI+ P+ + +QF+ LG+ P GVLL GPPG GKTL+A+A Sbjct: 576 PNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAV 635 Query: 360 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEV 539 A ++ F+ + GP+L+ M++G+ + VR F+ AK APC+IF DE+DA+ +R D E Sbjct: 636 ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET 695 Query: 540 SGDRR 554 R Sbjct: 696 GASVR 700 Score = 105 bits (263), Expect = 9e-23 Identities = 53/121 (43%), Positives = 78/121 (64%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 371 + D+GG + ++E+ + ++ M H E + LG+ PP+GVLL+GPPG GKTL+A A A + Sbjct: 264 FEDVGGNDMTLKEVCKMLI-HMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGEL 322 Query: 372 NATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 + LK+A P++V G+ + +R+ FE A APCIIFIDEIDAI KR + +R Sbjct: 323 DLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMER 382 Query: 552 R 554 R Sbjct: 383 R 383
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 116 bits (291), Expect = 5e-26 Identities = 55/121 (45%), Positives = 82/121 (67%) Frame = +3 Query: 162 MEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKT 341 ++++ + + D+ G+E+ EL E + + + ++F +LG + PKGVLL GPPGTGKT Sbjct: 150 VQMEPQTQVTFGDVAGIEQAKLELTEVVDF-LKNADRFTELGAKIPKGVLLVGPPGTGKT 208 Query: 342 LMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTK 521 L+A+A A + F ++G + V+MF+G GA VRD FE AK APCI+FIDEIDA+G + Sbjct: 209 LLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQ 268 Query: 522 R 524 R Sbjct: 269 R 269
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 116 bits (291), Expect = 5e-26 Identities = 53/120 (44%), Positives = 82/120 (68%) Frame = +3 Query: 165 EVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTL 344 +++ K ++D+ G+++ +EL E + + E+F +G + P+GVLL GPPGTGKTL Sbjct: 201 QMEAKTGVGFDDVAGIDEAKEELQEVVTF-LKQPEKFTAIGAKIPRGVLLIGPPGTGKTL 259 Query: 345 MARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 +A+A A + F ++G + V+MF+G GA VRD F+ AKE APC++FIDEIDA+G +R Sbjct: 260 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDAVGRQR 319
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 116 bits (290), Expect = 7e-26 Identities = 60/139 (43%), Positives = 93/139 (66%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 +R A+E + K T + D+ G+++ +EL+E + + +++ ++G + P+GVLL GPP Sbjct: 126 ARSAAVE-EGKVTTRFADVAGVDEAKEELMEVVDF-LKFPKKYTEIGGKIPRGVLLVGPP 183 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 GTGKTL+ARA A + + F +++G ++MF+G GA VRD F+ A+EKAP IIFIDE+D Sbjct: 184 GTGKTLLARAVAGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELD 243 Query: 507 AIGTKRFDSEVSGDRRSAT 563 AIG R ++ S D R T Sbjct: 244 AIGKSRLNAIHSNDEREQT 262
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 116 bits (290), Expect = 7e-26 Identities = 60/160 (37%), Positives = 97/160 (60%), Gaps = 8/160 (5%) Frame = +3 Query: 93 GVNKDSYLILDTLPSEYDSRVKAMEVDEK--------PTEDYNDIGGLEKEIQELVEAIV 248 G + DS ++ + +E D V + ++ P +++DIGGLE+ L + + Sbjct: 613 GYDNDSIILSGPIITEQDVDVSINRIRKEKSNTIFTVPKVNWDDIGGLEEAKTVLRDTLQ 672 Query: 249 LPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 428 LP+ E F + G++P GVLLYGPPGTGKTL+A+A A + + F+ + GP+L+ M++G+ Sbjct: 673 LPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGE 731 Query: 429 GAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 VR+ FE A+ +PC+IF DE+D+I R +S SG+ Sbjct: 732 SEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSGN 771
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 115 bits (287), Expect = 2e-25 Identities = 61/143 (42%), Positives = 90/143 (62%) Frame = +3 Query: 126 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKG 305 TL EY R E ++ T Y D+GG++K++ ++ E I LP+ + E F +GI PKG Sbjct: 506 TLAEEYLKREDYEENNDDIT--YEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKG 563 Query: 306 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCI 485 VL++G PGTGKT +A+A A ++NA + GP+++ IG+ + +R F+ A EK PCI Sbjct: 564 VLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCI 623 Query: 486 IFIDEIDAIGTKRFDSEVSGDRR 554 IFIDEID+I KR S ++R Sbjct: 624 IFIDEIDSIANKRSKSNNELEKR 646 Score = 111 bits (278), Expect = 2e-24 Identities = 51/115 (44%), Positives = 76/115 (66%) Frame = +3 Query: 180 PTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARAC 359 PT +NDIGG+ + ++L E I+ P+ +K + K KG+LLYGPPG GKTL+A+A Sbjct: 929 PTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAI 988 Query: 360 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 A + A F+ + GP+L+ M+ G+ VRD F+ A+ +PCIIF DEID++ +R Sbjct: 989 ANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKER 1043
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 114 bits (286), Expect = 2e-25 Identities = 59/126 (46%), Positives = 84/126 (66%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 S+ + + D+ T + D+ G ++ +E+ E +V + +FQKLG + PKGVL+ GPP Sbjct: 137 SKARMLTEDQIKTT-FADVAGCDEAKEEVAE-LVEYLREPSRFQKLGGKIPKGVLMVGPP 194 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 GTGKTL+A+A A + F ++G V+MF+G GA VRD FE AK+ APCIIFIDEID Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254 Query: 507 AIGTKR 524 A+G +R Sbjct: 255 AVGRQR 260
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 114 bits (286), Expect = 2e-25 Identities = 59/126 (46%), Positives = 84/126 (66%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 S+ + + D+ T + D+ G ++ +E+ E +V + +FQKLG + PKGVL+ GPP Sbjct: 137 SKARMLTEDQIKTT-FADVAGCDEAKEEVAE-LVEYLREPSRFQKLGGKIPKGVLMVGPP 194 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 GTGKTL+A+A A + F ++G V+MF+G GA VRD FE AK+ APCIIFIDEID Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254 Query: 507 AIGTKR 524 A+G +R Sbjct: 255 AVGRQR 260
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 114 bits (286), Expect = 2e-25 Identities = 59/126 (46%), Positives = 84/126 (66%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 S+ + + D+ T + D+ G ++ +E+ E +V + +FQKLG + PKGVL+ GPP Sbjct: 137 SKARMLTEDQIKTT-FADVAGCDEAKEEVAE-LVEYLREPSRFQKLGGKIPKGVLMVGPP 194 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 GTGKTL+A+A A + F ++G V+MF+G GA VRD FE AK+ APCIIFIDEID Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254 Query: 507 AIGTKR 524 A+G +R Sbjct: 255 AVGRQR 260
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 114 bits (286), Expect = 2e-25 Identities = 59/126 (46%), Positives = 84/126 (66%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 S+ + + D+ T + D+ G ++ +E+ E +V + +FQKLG + PKGVL+ GPP Sbjct: 137 SKARMLTEDQIKTT-FADVAGCDEAKEEVAE-LVEYLREPSRFQKLGGKIPKGVLMVGPP 194 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 GTGKTL+A+A A + F ++G V+MF+G GA VRD FE AK+ APCIIFIDEID Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254 Query: 507 AIGTKR 524 A+G +R Sbjct: 255 AVGRQR 260
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 114 bits (286), Expect = 2e-25 Identities = 59/126 (46%), Positives = 84/126 (66%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 S+ + + D+ T + D+ G ++ +E+ E +V + +FQKLG + PKGVL+ GPP Sbjct: 137 SKARMLTEDQIKTT-FADVAGCDEAKEEVAE-LVEYLREPSRFQKLGGKIPKGVLMVGPP 194 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 GTGKTL+A+A A + F ++G V+MF+G GA VRD FE AK+ APCIIFIDEID Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254 Query: 507 AIGTKR 524 A+G +R Sbjct: 255 AVGRQR 260
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 114 bits (286), Expect = 2e-25 Identities = 58/111 (52%), Positives = 76/111 (68%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 371 ++D+ G E+E QELVE + + ++F KLG R P GVLL GPPGTGKTL+A+A A + Sbjct: 186 FSDVAGAEEEKQELVEVVEF-LKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEA 244 Query: 372 NATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 F ++G V+MF+G GA VR FE AK+ AP IIFIDEIDA+G +R Sbjct: 245 GVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQR 295
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 114 bits (286), Expect = 2e-25 Identities = 58/111 (52%), Positives = 76/111 (68%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 371 ++D+ G E+E QELVE + + ++F KLG R P GVLL GPPGTGKTL+A+A A + Sbjct: 186 FSDVAGAEEEKQELVEVVEF-LKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEA 244 Query: 372 NATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 F ++G V+MF+G GA VR FE AK+ AP IIFIDEIDA+G +R Sbjct: 245 GVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQR 295
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 114 bits (285), Expect = 3e-25 Identities = 57/129 (44%), Positives = 86/129 (66%) Frame = +3 Query: 138 EYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLY 317 E ++V E+D K + D+ G E+ E++E + + + +Q+Q LG + PKG +L Sbjct: 292 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 346 Query: 318 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFID 497 GPPGTGKTL+A+A A + N F+ ++G + ++MF+G G VRD F LA++ APCI+FID Sbjct: 347 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 406 Query: 498 EIDAIGTKR 524 EIDA+G KR Sbjct: 407 EIDAVGRKR 415
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 114 bits (285), Expect = 3e-25 Identities = 57/114 (50%), Positives = 80/114 (70%), Gaps = 3/114 (2%) Frame = +3 Query: 192 YNDIGGLEK---EIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 ++D+ G ++ E+QELVE + P +FQKLG + PKG+L+ GPPGTGKTL+A+A A Sbjct: 151 FSDVAGCDEAKEEVQELVEYLKEP----SRFQKLGGKIPKGILMVGPPGTGKTLLAKAIA 206 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 + F ++G V+MF+G GA VRD FE +++ APCIIFIDEIDA+G +R Sbjct: 207 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCIIFIDEIDAVGRQR 260
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 114 bits (285), Expect = 3e-25 Identities = 57/129 (44%), Positives = 86/129 (66%) Frame = +3 Query: 138 EYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLY 317 E ++V E+D K + D+ G E+ E++E + + + +Q+Q LG + PKG +L Sbjct: 293 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 347 Query: 318 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFID 497 GPPGTGKTL+A+A A + N F+ ++G + ++MF+G G VRD F LA++ APCI+FID Sbjct: 348 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 407 Query: 498 EIDAIGTKR 524 EIDA+G KR Sbjct: 408 EIDAVGRKR 416
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 114 bits (285), Expect = 3e-25 Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 3/129 (2%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEK---EIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLY 317 S+ + + D+ T + D+ G ++ E+ ELVE + P +FQKLG + PKG+L+ Sbjct: 137 SKARMLSEDQIQTT-FADVAGCDEAKEEVSELVEYLKEP----SRFQKLGGKIPKGILMV 191 Query: 318 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFID 497 GPPGTGKTL+A+A A + F ++G V+MF+G GA VRD FE A++ APCIIFID Sbjct: 192 GPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFID 251 Query: 498 EIDAIGTKR 524 EIDA+G +R Sbjct: 252 EIDAVGRQR 260
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 114 bits (285), Expect = 3e-25 Identities = 59/122 (48%), Positives = 82/122 (67%) Frame = +3 Query: 177 KPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARA 356 K T + +I GL++E EL+E IV + + ++ ++G R P+GV+LYGPPGTGKTL+A+A Sbjct: 225 KSTVKFTNIAGLQEEKHELLE-IVDYLKNPLKYAQMGARSPRGVILYGPPGTGKTLLAKA 283 Query: 357 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSE 536 A + F + G M +G GAK VRD F AK+ APCIIFIDEID++G+KR E Sbjct: 284 VAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVE 343 Query: 537 VS 542 +S Sbjct: 344 LS 345
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 114 bits (285), Expect = 3e-25 Identities = 52/111 (46%), Positives = 78/111 (70%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 371 ++D+ G+E+ +EL E + + + +F +G PKGVLL GPPGTGKTL+A+A A + Sbjct: 153 FDDVAGIEEAKEELAEVVAF-LKNPSKFLAVGASIPKGVLLVGPPGTGKTLLAKAIAGEA 211 Query: 372 NATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 + F ++G + V+MF+G GA VRD F+ AK+ APC++FIDEIDA+G +R Sbjct: 212 SVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDAVGRQR 262
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 114 bits (284), Expect = 3e-25 Identities = 60/144 (41%), Positives = 88/144 (61%), Gaps = 5/144 (3%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEK---EIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLY 317 S+ K + ++D+ G+E+ E+ E+V+ + P +++ LG + PKGVLL Sbjct: 158 SKAKVYVEGDSTKVTFDDVAGVEEAKTELSEVVDFLKFP----QRYTALGAKIPKGVLLV 213 Query: 318 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFID 497 GPPGTGKTL+A+A A + F ++G + V++F+G GA VRD FE AK++APCI+FID Sbjct: 214 GPPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFID 273 Query: 498 EIDAIGTKRFDSEVSG--DRRSAT 563 E+DAIG R G D R T Sbjct: 274 ELDAIGKSRASGAFMGGNDEREQT 297
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 113 bits (283), Expect = 4e-25 Identities = 60/142 (42%), Positives = 91/142 (64%) Frame = +3 Query: 120 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP 299 LD L + + V A ++ P+ ++D+GGL+ +E++E I LP+ H E LG+R Sbjct: 681 LDQLQTAHSQAVGAPKI---PSVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRR- 735 Query: 300 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAP 479 G+LL+GPPGTGKTL+A+A A + + TFL + GP+L+ M++G + VR+ F A+ AP Sbjct: 736 SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAP 795 Query: 480 CIIFIDEIDAIGTKRFDSEVSG 545 CIIF DE+D++ R S SG Sbjct: 796 CIIFFDELDSLAPSRGRSGDSG 817 Score = 37.4 bits (85), Expect = 0.041 Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 2/128 (1%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLG--IRPPKGVLLYG 320 SRV + P D GLE + EL + K Q G + VLL G Sbjct: 417 SRVPPLPSGRSPPWDSLSPPGLEALVNELCAVL------KPHLQPGGTLLTGTSCVLLQG 470 Query: 321 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDE 500 PPG+GKT A ++ LK+ L ++ F A+ P ++ + Sbjct: 471 PPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTA 530 Query: 501 IDAIGTKR 524 +D +G R Sbjct: 531 LDLLGRDR 538
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 113 bits (282), Expect = 6e-25 Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 3/129 (2%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEK---EIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLY 317 S+ + + D+ T + D+ G ++ E+ ELVE + P +FQKLG + PKG+L+ Sbjct: 137 SKARMLSEDQIQTT-FADVAGCDEAKEEVSELVEYLKEP----SRFQKLGGKIPKGILMV 191 Query: 318 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFID 497 GPPGTGKTL+A+A A + F ++G V+MF+G GA VRD FE +++ APCIIFID Sbjct: 192 GPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFID 251 Query: 498 EIDAIGTKR 524 EIDA+G +R Sbjct: 252 EIDAVGRQR 260
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 113 bits (282), Expect = 6e-25 Identities = 60/142 (42%), Positives = 90/142 (63%) Frame = +3 Query: 120 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP 299 LD L + + V A + P+ ++D+GGL+ +E++E I LP+ H E LG+R Sbjct: 684 LDQLQTAHSQAVGAPRI---PSVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRR- 738 Query: 300 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAP 479 G+LL+GPPGTGKTL+A+A A + + TFL + GP+L+ M++G + VR+ F A+ AP Sbjct: 739 SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAP 798 Query: 480 CIIFIDEIDAIGTKRFDSEVSG 545 CIIF DE+D++ R S SG Sbjct: 799 CIIFFDELDSLAPSRGRSGDSG 820 Score = 36.6 bits (83), Expect = 0.070 Identities = 34/126 (26%), Positives = 52/126 (41%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 S V ++ P D GLE + EL AI+ P H + L + VLL GPP Sbjct: 418 SHVPSLPSGRSPPWDSLSPPGLEALVNELC-AILKP--HLQPGGTL-LTGTSCVLLQGPP 473 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 G+GKT A ++ LK+ L ++ F A+ P ++ + +D Sbjct: 474 GSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAVLLLTAVD 533 Query: 507 AIGTKR 524 +G R Sbjct: 534 LLGRDR 539
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 112 bits (281), Expect = 8e-25 Identities = 59/142 (41%), Positives = 92/142 (64%) Frame = +3 Query: 120 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP 299 L+ L + + V A ++ P+ ++D+GGL++ +E++E I LP+ H E LG+R Sbjct: 683 LEQLQTAHSQAVGAPKI---PSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRR- 737 Query: 300 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAP 479 G+LL+GPPGTGKTL+A+A A + + TFL + GP+L+ M++G + VR+ F A+ AP Sbjct: 738 SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAP 797 Query: 480 CIIFIDEIDAIGTKRFDSEVSG 545 CIIF DE+D++ R S SG Sbjct: 798 CIIFFDELDSLAPSRGRSGDSG 819 Score = 38.1 bits (87), Expect = 0.024 Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 2/108 (1%) Frame = +3 Query: 207 GLEKEIQELVEAIVLPMTHKEQFQKLG--IRPPKGVLLYGPPGTGKTLMARACAAQTNAT 380 GLE + EL + K + Q G + VLL GPPG GKT + A + Sbjct: 437 GLEALVSELCAVL------KPRLQPGGALLTGTSSVLLRGPPGCGKTTVVAAACSHLGLH 490 Query: 381 FLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 LK+ L G ++ F A+ P ++ + +D +G R Sbjct: 491 LLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVLLLTAVDLLGRDR 538
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 112 bits (281), Expect = 8e-25 Identities = 60/124 (48%), Positives = 83/124 (66%), Gaps = 1/124 (0%) Frame = +3 Query: 156 KAMEVDEKPTE-DYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGT 332 +A + D K ++ + D+ G E+E QELVE + + + +++ LG R P GVLL GPPGT Sbjct: 179 RAKQQDGKTSKVRFADVAGSEEEKQELVEVVDF-LKNPKKYHDLGARIPAGVLLEGPPGT 237 Query: 333 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAI 512 GKTL+A+A A + F ++G V+MF+G GA VRD FE AK+ AP IIFIDEIDA+ Sbjct: 238 GKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDAV 297 Query: 513 GTKR 524 G +R Sbjct: 298 GRQR 301
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 112 bits (281), Expect = 8e-25 Identities = 58/122 (47%), Positives = 83/122 (68%) Frame = +3 Query: 177 KPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARA 356 K + +++I GL++E EL+E IV + + ++ ++G R P+GV+LYGPPGTGKTL+A+A Sbjct: 222 KSSVRFDNIAGLQEEKHELLE-IVDYLKNPLKYAQMGARSPRGVILYGPPGTGKTLLAKA 280 Query: 357 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSE 536 A + F + G M +G GAK VRD F AK+ APCIIFIDEID++G+KR E Sbjct: 281 VAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVE 340 Query: 537 VS 542 +S Sbjct: 341 LS 342
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 112 bits (281), Expect = 8e-25 Identities = 60/126 (47%), Positives = 81/126 (64%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 SR K + D+ + D+ G + E +E V IV + +FQ LG + PKG+L+ GPP Sbjct: 136 SRAKMLNQDQIKVT-FADVAGCD-EAKEEVGEIVDFLRDPNKFQNLGGKIPKGILMVGPP 193 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 GTGKTL+ARA A + F ++G V+MF+G GA VRD FE AK+ APC+IFIDEID Sbjct: 194 GTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEID 253 Query: 507 AIGTKR 524 A+G +R Sbjct: 254 AVGRQR 259
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 110 bits (274), Expect(2) = 1e-24 Identities = 54/142 (38%), Positives = 85/142 (59%) Frame = +3 Query: 120 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP 299 L+ + S+Y + + A + P ++D+GGL ++E I LP+ H E F G++ Sbjct: 696 LEKVRSDYSASIGAPSI---PNVTWDDVGGLSSVKDAIMETIDLPLKHPELFGS-GLKKR 751 Query: 300 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAP 479 G+L YGPPGTGKTL+A+A A + F + GP+L+ M+IG+ VR F+ A++ P Sbjct: 752 SGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKP 811 Query: 480 CIIFIDEIDAIGTKRFDSEVSG 545 C+IF DE+D++ KR + SG Sbjct: 812 CVIFFDEVDSVAPKRGNQGDSG 833 Score = 23.1 bits (48), Expect(2) = 1e-24 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +1 Query: 550 GEVQRTMLELLNQLDGFSSD 609 G + R + +LL +LDG SSD Sbjct: 834 GVMDRIVSQLLAELDGMSSD 853
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 112 bits (280), Expect = 1e-24 Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 16/174 (9%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 371 + D+ G E+ E++E + + + +Q+Q LG + PKG +L GPPGTGKTL+A+A A + Sbjct: 173 FADVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 231 Query: 372 NATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 N F+ + G + ++MF+G G VRD F +A++ APCI+FIDEIDAIG KR + G Sbjct: 232 NVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQS 291 Query: 552 ----------------RSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 S+TN V +A + NR DILDPA Sbjct: 292 EQENTLNQMLVEMDGFNSSTNVVVLAGT-----------------NRPDILDPA 328
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 111 bits (278), Expect = 2e-24 Identities = 60/129 (46%), Positives = 82/129 (63%), Gaps = 3/129 (2%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEK---EIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLY 317 S+ K EV E + D+ G ++ E+QE+V+ + P +++ LG + PKG LL Sbjct: 235 SKSKFQEVPETGVT-FGDVAGADQAKLELQEVVDFLKNP----DKYTALGAKIPKGCLLV 289 Query: 318 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFID 497 GPPGTGKTL+ARA A + F A + V++F+G GA VRD FE AK KAPCI+FID Sbjct: 290 GPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 349 Query: 498 EIDAIGTKR 524 EIDA+G +R Sbjct: 350 EIDAVGRQR 358
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 111 bits (277), Expect = 2e-24 Identities = 58/151 (38%), Positives = 91/151 (60%) Frame = +3 Query: 120 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP 299 LD+ + S + + + EKP ++DI GLE + L E ++LP+ + F G +P Sbjct: 104 LDSDAKKLRSALTSAILVEKPNVRWDDIAGLENAKEALKETVLLPIKLPQLFSH-GRKPW 162 Query: 300 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAP 479 G+LLYGPPGTGK+ +A+A A + +TF ++ LV ++G+ +LVR FE+A+E+ P Sbjct: 163 SGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKP 222 Query: 480 CIIFIDEIDAIGTKRFDSEVSGDRRSATNYV 572 IIFIDEID++ R + E RR T ++ Sbjct: 223 SIIFIDEIDSLCGSRSEGESESSRRIKTEFL 253
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 111 bits (277), Expect = 2e-24 Identities = 60/129 (46%), Positives = 82/129 (63%), Gaps = 3/129 (2%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEK---EIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLY 317 S+ K EV E + D+ G ++ E+QE+V+ + P +++ LG + PKG LL Sbjct: 247 SKSKFQEVPETGVS-FADVAGADQAKLELQEVVDFLKNP----DKYTALGAKIPKGCLLV 301 Query: 318 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFID 497 GPPGTGKTL+ARA A + F A + V++F+G GA VRD FE AK KAPCI+FID Sbjct: 302 GPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 361 Query: 498 EIDAIGTKR 524 EIDA+G +R Sbjct: 362 EIDAVGRQR 370
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 110 bits (276), Expect = 3e-24 Identities = 60/129 (46%), Positives = 82/129 (63%), Gaps = 3/129 (2%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEK---EIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLY 317 S+ K EV E + D+ G ++ E+QE+V+ + P +++ LG + PKG LL Sbjct: 238 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDFLKNP----DKYTALGAKIPKGCLLV 292 Query: 318 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFID 497 GPPGTGKTL+ARA A + F A + V++F+G GA VRD FE AK KAPCI+FID Sbjct: 293 GPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 352 Query: 498 EIDAIGTKR 524 EIDA+G +R Sbjct: 353 EIDAVGRQR 361
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 110 bits (276), Expect = 3e-24 Identities = 52/125 (41%), Positives = 74/125 (59%) Frame = +3 Query: 150 RVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPG 329 R K E P +GG++ + +L+E I LP+ H E F G+ PP+GVLL+GPPG Sbjct: 190 RQKIKEDRSPPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPG 249 Query: 330 TGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDA 509 GKT +A A A + F+ ++ P +V G+ K +RD F+ A+ APC++F DEIDA Sbjct: 250 CGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDA 309 Query: 510 IGTKR 524 I KR Sbjct: 310 ITPKR 314 Score = 105 bits (261), Expect = 2e-22 Identities = 50/129 (38%), Positives = 80/129 (62%) Frame = +3 Query: 180 PTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARAC 359 P + ++G L++ EL AIV P+ E ++K+GI P GVLL+GPPG GKTL+A+A Sbjct: 528 PDVTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAV 587 Query: 360 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEV 539 A ++ A F+ + GP+L+ ++G+ + +R F A+ PC+IF DE+DA+ +R D+ + Sbjct: 588 ANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRR-DTSL 646 Query: 540 SGDRRSATN 566 S N Sbjct: 647 SESSSRVVN 655
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 110 bits (276), Expect = 3e-24 Identities = 60/129 (46%), Positives = 82/129 (63%), Gaps = 3/129 (2%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEK---EIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLY 317 S+ K EV E + D+ G ++ E+QE+V+ + P +++ LG + PKG LL Sbjct: 238 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDFLKNP----DKYTALGAKIPKGCLLV 292 Query: 318 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFID 497 GPPGTGKTL+ARA A + F A + V++F+G GA VRD FE AK KAPCI+FID Sbjct: 293 GPPGTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 352 Query: 498 EIDAIGTKR 524 EIDA+G +R Sbjct: 353 EIDAVGRQR 361
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 110 bits (275), Expect = 4e-24 Identities = 57/133 (42%), Positives = 79/133 (59%) Frame = +3 Query: 174 EKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMAR 353 E P ++DIGG E+ ++ E I LP+ E F +LGI PKGVLLYGPPG KTL A+ Sbjct: 509 EMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAK 568 Query: 354 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDS 533 A A ++ FL + GP++ ++G+ + +R+ F A+ AP IIF DEIDA+ R Sbjct: 569 ALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDR--- 625 Query: 534 EVSGDRRSATNYV 572 G SA N+V Sbjct: 626 --DGSSTSAANHV 636 Score = 107 bits (268), Expect = 2e-23 Identities = 53/122 (43%), Positives = 77/122 (63%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 371 Y +GGL+KEI+ L AI +P+ F G+ PP+G+LL+GPPGTGKT++ R A + Sbjct: 244 YAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTS 303 Query: 372 NATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 551 NA L + GP +V ++G+ +RD F A++ P IIFIDEID+I R + + SG+ Sbjct: 304 NAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDD-SGEV 362 Query: 552 RS 557 S Sbjct: 363 ES 364
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 110 bits (274), Expect = 5e-24 Identities = 53/107 (49%), Positives = 75/107 (70%) Frame = +3 Query: 219 EIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAG 398 E++E+V+ + P E++ +LG R PKGVLL GPPGTGKTL+ARA A + F AG Sbjct: 212 EVEEIVDYLKDP----EKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAG 267 Query: 399 PQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEV 539 + ++ +G GA+ VRD F+ AK +APCIIFIDEID++G+KR + + Sbjct: 268 SEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKRVSNSI 314
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 109 bits (273), Expect = 6e-24 Identities = 55/132 (41%), Positives = 80/132 (60%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLM 347 + EKP + D+ GLE + L EA++LP+ F K +P G+LLYGPPGTGK+ + Sbjct: 124 LSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLF-KGNRKPTSGILLYGPPGTGKSYL 182 Query: 348 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRF 527 A+A A + N+TF ++ LV ++G+ KLV+ F +A+E P IIFIDE+DA+ R Sbjct: 183 AKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRG 242 Query: 528 DSEVSGDRRSAT 563 + E RR T Sbjct: 243 EGESEASRRIKT 254
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 109 bits (272), Expect = 8e-24 Identities = 54/111 (48%), Positives = 76/111 (68%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 371 + DI G+++ E E IV + +++ +G + PKG+LL GPPGTGKTL+A+A A + Sbjct: 185 FKDIAGIDEAKTEF-EEIVSFLKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKAIANEA 243 Query: 372 NATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 + F +AG + V+MFIG GA VRD F+ A E APCI+FIDEIDA+G +R Sbjct: 244 DVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFIDEIDAVGRER 294
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 109 bits (272), Expect = 8e-24 Identities = 57/136 (41%), Positives = 84/136 (61%), Gaps = 1/136 (0%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP-KGVLLYGPPGTGKTL 344 VD ++DI G E Q L E ++LP E F G+R P +G+LL+GPPG GKT+ Sbjct: 331 VDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFT--GLRAPARGLLLFGPPGNGKTM 388 Query: 345 MARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 +A+A AA++NATF ++ L ++G+G KLVR F +A+E P IIFIDE+D++ +R Sbjct: 389 LAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCER 448 Query: 525 FDSEVSGDRRSATNYV 572 + E RR T ++ Sbjct: 449 REGEHDASRRLKTEFL 464
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 108 bits (271), Expect = 1e-23 Identities = 57/141 (40%), Positives = 85/141 (60%) Frame = +3 Query: 144 DSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGP 323 DS V +++ E + ++E+QE+VE + P ++F LG + PKG+LL GP Sbjct: 267 DSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNP----QKFTVLGGKLPKGILLVGP 322 Query: 324 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEI 503 PGTGKTL+ARA A + + F +G + +MF+G GA +R+ F AK APC+IFIDE+ Sbjct: 323 PGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDEL 382 Query: 504 DAIGTKRFDSEVSGDRRSATN 566 D++G KR +S + R N Sbjct: 383 DSVGGKRIESPMHPYSRQTIN 403
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 108 bits (271), Expect = 1e-23 Identities = 55/158 (34%), Positives = 92/158 (58%) Frame = +3 Query: 72 LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVL 251 LK DL+ D +++ + + A ++ P ++DIGG++ E+++ I + Sbjct: 664 LKQNDLLIDMTDITAVINIARDRFSDSIGAPKI---PNVTWDDIGGMDVVKGEIMDTIDM 720 Query: 252 PMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDG 431 P+ H E F G++ G+L YGPPGTGKTL+A+A A+ + F + GP+L+ M+IG+ Sbjct: 721 PLKHPELFSS-GMKKRSGILFYGPPGTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGES 779 Query: 432 AKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 VR F+ A++ PC+IF DE+D++ KR + SG Sbjct: 780 EANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSG 817
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 108 bits (270), Expect = 1e-23 Identities = 59/142 (41%), Positives = 85/142 (59%), Gaps = 3/142 (2%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 SR K + + ++ G ++ QE++E + + + ++ KLG + P+G +L GPP Sbjct: 272 SRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHF-LKNPGKYTKLGAKIPRGAILSGPP 330 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 GTGKTL+A+A A + N FL ++G + V+MF+G GA VRD F A+ AP IIFIDEID Sbjct: 331 GTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEID 390 Query: 507 AIGTKRFDSEVSG---DRRSAT 563 AIG +R G D R AT Sbjct: 391 AIGKERGKGGALGGANDEREAT 412
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 108 bits (270), Expect = 1e-23 Identities = 57/141 (40%), Positives = 85/141 (60%) Frame = +3 Query: 144 DSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGP 323 DS V +++ E + ++E+QE+VE + P ++F LG + PKG+LL GP Sbjct: 325 DSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNP----QKFTILGGKLPKGILLVGP 380 Query: 324 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEI 503 PGTGKTL+ARA A + + F +G + +MF+G GA +R+ F AK APC+IFIDE+ Sbjct: 381 PGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDEL 440 Query: 504 DAIGTKRFDSEVSGDRRSATN 566 D++G KR +S + R N Sbjct: 441 DSVGGKRIESPMHPYSRQTIN 461
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 108 bits (269), Expect = 2e-23 Identities = 52/122 (42%), Positives = 77/122 (63%) Frame = +3 Query: 180 PTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARAC 359 P ++DIGG++ E+++ I +P+ H E F G++ G+L YGPPGTGKTLMA+A Sbjct: 727 PNVTWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAKAI 785 Query: 360 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEV 539 A + F + GP+L+ M+IG+ VR F+ A+E PC+IF DEID++ KR + Sbjct: 786 ATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQGD 845 Query: 540 SG 545 SG Sbjct: 846 SG 847
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 108 bits (269), Expect = 2e-23 Identities = 56/136 (41%), Positives = 84/136 (61%), Gaps = 1/136 (0%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP-KGVLLYGPPGTGKTL 344 VD ++DI G + Q L E ++LP E F G+R P +G+LL+GPPG GKT+ Sbjct: 333 VDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFT--GLRAPARGLLLFGPPGNGKTM 390 Query: 345 MARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 +A+A AA++NATF ++ L ++G+G KLVR F +A+E P IIFIDE+D++ +R Sbjct: 391 LAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCER 450 Query: 525 FDSEVSGDRRSATNYV 572 + E RR T ++ Sbjct: 451 REGEHDASRRLKTEFL 466
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 107 bits (268), Expect(2) = 2e-23 Identities = 56/175 (32%), Positives = 95/175 (54%), Gaps = 8/175 (4%) Frame = +3 Query: 45 VIGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVK--------AMEVDEKPTEDYND 200 ++GL N+ L+ V ++ +P +++ + ++ P + D Sbjct: 783 LMGLAKDSNISLEKLIKVGNGG--LITWIPEDFNKAINDARNQFSDSIGAPRIPDVKWED 840 Query: 201 IGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNAT 380 IGGL+ E+++ I +P+ H E F G++ G+L YGPPGTGKTL+A+A A + Sbjct: 841 IGGLDLVKDEIMDTIDMPLKHPELFSN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLN 899 Query: 381 FLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 F + GP+L+ M+IG+ VR F+ A++ PC+IF DE+D++ KR + SG Sbjct: 900 FFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSG 954 Score = 20.8 bits (42), Expect(2) = 2e-23 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = +1 Query: 550 GEVQRTMLELLNQLDGFSSDERIKGD 627 G + R + +LL +LDG S GD Sbjct: 955 GVMDRIVSQLLAELDGMSGGAEGGGD 980
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 107 bits (268), Expect = 2e-23 Identities = 59/129 (45%), Positives = 81/129 (62%), Gaps = 3/129 (2%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEK---EIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLY 317 S+ K EV E + D+ G ++ E+QE+V+ + P +++ LG + PKG LL Sbjct: 215 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDFLKNP----DKYTALGAKIPKGCLLV 269 Query: 318 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFID 497 GPPGTGKTL+ARA A + F A + V++F+G GA VR FE AK KAPCI+FID Sbjct: 270 GPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFID 329 Query: 498 EIDAIGTKR 524 EIDA+G +R Sbjct: 330 EIDAVGRQR 338
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 107 bits (267), Expect = 3e-23 Identities = 55/147 (37%), Positives = 86/147 (58%), Gaps = 3/147 (2%) Frame = +3 Query: 120 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP 299 ++T +++ + A + P + D+GGL+ E+++ I +PM H E F GI+ Sbjct: 797 INTARNKFSDSIGAPRI---PNVKWEDVGGLDVVKDEILDTIDMPMKHPELFSN-GIKKR 852 Query: 300 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAP 479 G+L YGPPGTGKTL+A+A A F + GP+L+ M+IG+ VR F+ A++ P Sbjct: 853 SGILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARDAKP 912 Query: 480 CIIFIDEIDAIGTKR---FDSEVSGDR 551 C++F DE+D++ KR DSE DR Sbjct: 913 CVVFFDELDSVAPKRGNQGDSEGVMDR 939
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 107 bits (267), Expect = 3e-23 Identities = 51/122 (41%), Positives = 76/122 (62%) Frame = +3 Query: 180 PTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARAC 359 P ++D+GGL LVE I LP+ E F K G++ G+L YGPPGTGKTL+A+A Sbjct: 1025 PNVGWDDVGGLTNVKDALVETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAI 1083 Query: 360 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEV 539 A + + F + GP+L+ M+IG+ VR F+ A++ PC++F DE+D++ KR + Sbjct: 1084 ATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGD 1143 Query: 540 SG 545 SG Sbjct: 1144 SG 1145
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 107 bits (267), Expect = 3e-23 Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 2/141 (1%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 S+ K + + D+ G ++ +E++E + + +++K+G + P+G +L GPP Sbjct: 332 SKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVSF-LKEPSRYEKMGAKIPRGAILSGPP 390 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 GTGKTL+A+A A + F ++G + V+MF+G GA VRD F+ A+E AP I+FIDEID Sbjct: 391 GTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEID 450 Query: 507 AIGTKRFDSEVSG--DRRSAT 563 AIG R SG D R T Sbjct: 451 AIGKARQKGNFSGANDERENT 471
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 107 bits (267), Expect = 3e-23 Identities = 50/122 (40%), Positives = 76/122 (62%) Frame = +3 Query: 180 PTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARAC 359 P + D+GGL+ E+++ I +P+ H E F K G++ G+L YGPPGTGKTL+A+A Sbjct: 808 PDVKWEDVGGLDVVKDEILDTIEMPLKHPELFSK-GMKKRSGILFYGPPGTGKTLLAKAI 866 Query: 360 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEV 539 A F + GP+L+ M+IG+ VR F+ A++ PC+IF DE+D++ KR + Sbjct: 867 ATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGD 926 Query: 540 SG 545 SG Sbjct: 927 SG 928
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 106 bits (264), Expect = 7e-23 Identities = 54/129 (41%), Positives = 81/129 (62%) Frame = +3 Query: 144 DSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGP 323 DS V +++ E + ++E+QE+VE + P ++F LG + PKG+LL GP Sbjct: 267 DSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNP----QKFTVLGGKLPKGILLVGP 322 Query: 324 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEI 503 PGTGKTL+ARA A + + F +G + +MF+G GA +R+ F AK APC+IFIDE+ Sbjct: 323 PGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDEL 382 Query: 504 DAIGTKRFD 530 D++G KR + Sbjct: 383 DSVGGKRIE 391
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 105 bits (263), Expect = 9e-23 Identities = 53/148 (35%), Positives = 85/148 (57%) Frame = +3 Query: 102 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQK 281 +D L +D + + A ++ P ++D+GGL + E I LP+ E F K Sbjct: 963 QDFELAVDAARKNFADSIGAPKI---PNVTWDDVGGLGNVKDAITETIQLPLERPELFAK 1019 Query: 282 LGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFEL 461 G++ G+L YGPPGTGKTL+A+A A + + F + GP+L+ M+IG+ VR F+ Sbjct: 1020 -GMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQR 1078 Query: 462 AKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 A++ PC++F DE+D++ KR + SG Sbjct: 1079 ARDARPCVVFFDELDSVAPKRGNQGDSG 1106
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 105 bits (263), Expect = 9e-23 Identities = 55/125 (44%), Positives = 81/125 (64%), Gaps = 1/125 (0%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP-KGVLLYGPPGTGKTLMARACAAQ 368 + DI GL L EA+V P + F+ G+R P +G+LL+GPPGTGKT++A+A A + Sbjct: 470 WEDIAGLRNAKNSLKEAVVYPFLRPDLFK--GLREPVRGMLLFGPPGTGKTMIAKAVATE 527 Query: 369 TNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 +N+TF ++ L+ ++G+ KLVR F +AK+ +P IIFIDEID++ T R D+E Sbjct: 528 SNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSDNENESS 587 Query: 549 RRSAT 563 RR T Sbjct: 588 RRIKT 592
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 105 bits (262), Expect = 1e-22 Identities = 57/152 (37%), Positives = 93/152 (61%), Gaps = 2/152 (1%) Frame = +3 Query: 123 DTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP- 299 D + ++++ V E+P ++D+ GLE + L EA++LP+ F G R P Sbjct: 110 DPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPW 167 Query: 300 KGVLLYGPPGTGKTLMARACAAQTN-ATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKA 476 +G+LL+GPPGTGK+ +A+A A + N +TF ++ LV ++G+ KLV++ F+LA+E Sbjct: 168 RGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENK 227 Query: 477 PCIIFIDEIDAIGTKRFDSEVSGDRRSATNYV 572 P IIFIDEID++ R ++E RR T ++ Sbjct: 228 PSIIFIDEIDSLCGSRSENESEAARRIKTEFL 259
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 105 bits (262), Expect = 1e-22 Identities = 57/152 (37%), Positives = 93/152 (61%), Gaps = 2/152 (1%) Frame = +3 Query: 123 DTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP- 299 D + ++++ V E+P ++D+ GLE + L EA++LP+ F G R P Sbjct: 110 DPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPW 167 Query: 300 KGVLLYGPPGTGKTLMARACAAQTN-ATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKA 476 +G+LL+GPPGTGK+ +A+A A + N +TF ++ LV ++G+ KLV++ F+LA+E Sbjct: 168 RGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENK 227 Query: 477 PCIIFIDEIDAIGTKRFDSEVSGDRRSATNYV 572 P IIFIDEID++ R ++E RR T ++ Sbjct: 228 PSIIFIDEIDSLCGSRSENESEAARRIKTEFL 259
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 105 bits (262), Expect = 1e-22 Identities = 49/134 (36%), Positives = 81/134 (60%) Frame = +3 Query: 162 MEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKT 341 +EV+ + D GG++K + EL ++ P+ + E F+K+G++PP G+L +GPPG GKT Sbjct: 222 LEVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKT 281 Query: 342 LMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTK 521 +A A A + F K++ +++ G + +R+ F A AP I+FIDEIDAIG+K Sbjct: 282 KLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSK 341 Query: 522 RFDSEVSGDRRSAT 563 R + + ++R T Sbjct: 342 RENQQREMEKRIVT 355 Score = 93.6 bits (231), Expect = 5e-19 Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%) Frame = +3 Query: 180 PTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARAC 359 P ++D+GGL+ + IV P+ + ++ G+ G LLYGPPG GKTL+A+A Sbjct: 523 PDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAA 582 Query: 360 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR----- 524 A + A F+ + G +L+ ++G+ +R F+ A+ APC+IF DE+DA+ T R Sbjct: 583 ANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGA 642 Query: 525 ---------FDSEVSGDRRSATNYVGVAESARWI*Q**ED*R**LQPNRADILDPA 665 F E+ G R +G NR D++DPA Sbjct: 643 WVVERLLNQFLVELDGGERRNVYVIGAT-------------------NRPDVVDPA 679
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 105 bits (261), Expect = 2e-22 Identities = 49/122 (40%), Positives = 75/122 (61%) Frame = +3 Query: 180 PTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARAC 359 P ++D+GGL + E I LP+ E F K G++ G+L YGPPGTGKTL+A+A Sbjct: 989 PNVTWDDVGGLNNVKDAVTETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAI 1047 Query: 360 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEV 539 A + + F + GP+L+ M+IG+ VR F+ A++ PC++F DE+D++ KR + Sbjct: 1048 ATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGD 1107 Query: 540 SG 545 SG Sbjct: 1108 SG 1109
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 104 bits (260), Expect(2) = 2e-22 Identities = 49/104 (47%), Positives = 68/104 (65%) Frame = +3 Query: 255 MTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGA 434 M + E + G PK VL YGPPGTGKTLMARA A +TN++F+ + P+L+ +GD + Sbjct: 140 MKYLENPKLFGEWAPKNVLFYGPPGTGKTLMARALATETNSSFILVKAPELIGEHVGDAS 199 Query: 435 KLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRRSATN 566 K++R+ ++ A E APCI+FIDE+DAIG R + GD N Sbjct: 200 KMIRELYQRASESAPCIVFIDELDAIGLSREYQSLRGDVSEVVN 243 Score = 20.8 bits (42), Expect(2) = 2e-22 Identities = 8/23 (34%), Positives = 13/23 (56%) Frame = +1 Query: 550 GEVQRTMLELLNQLDGFSSDERI 618 G+V + LL +LDG +E + Sbjct: 236 GDVSEVVNALLTELDGIKENEGV 258
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 104 bits (260), Expect = 2e-22 Identities = 56/137 (40%), Positives = 87/137 (63%), Gaps = 2/137 (1%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP-KGVLLYGPPGTGKTL 344 V EKP +ND+ GLE + L EA++LP+ F G R P +G+LL+GPPGTGK+ Sbjct: 118 VMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSY 175 Query: 345 MARACAAQTN-ATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTK 521 +A+A A + N +TF ++ L+ ++G+ KLV++ FELA++ P IIFIDE+D++ Sbjct: 176 LAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGS 235 Query: 522 RFDSEVSGDRRSATNYV 572 R ++E RR T ++ Sbjct: 236 RNENESEAARRIKTEFL 252
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 104 bits (260), Expect = 2e-22 Identities = 56/137 (40%), Positives = 87/137 (63%), Gaps = 2/137 (1%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP-KGVLLYGPPGTGKTL 344 V EKP +ND+ GLE + L EA++LP+ F G R P +G+LL+GPPGTGK+ Sbjct: 118 VMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSY 175 Query: 345 MARACAAQTN-ATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTK 521 +A+A A + N +TF ++ L+ ++G+ KLV++ FELA++ P IIFIDE+D++ Sbjct: 176 LAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGS 235 Query: 522 RFDSEVSGDRRSATNYV 572 R ++E RR T ++ Sbjct: 236 RNENESEAARRIKTEFL 252
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 104 bits (259), Expect = 3e-22 Identities = 52/114 (45%), Positives = 76/114 (66%), Gaps = 3/114 (2%) Frame = +3 Query: 192 YNDIGGLEK---EIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA 362 + D+ G+ + E++E V+ + P E+F +LG + PKG LL GPPG GKTL+A+A A Sbjct: 308 FKDVAGMHEAKLEVREFVDYLKSP----ERFLQLGAKVPKGALLLGPPGCGKTLLAKAVA 363 Query: 363 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 + FL +AGP+ V++ G GA VR F+ A+ +APCI++IDEIDA+G KR Sbjct: 364 TEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKR 417
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 103 bits (258), Expect = 4e-22 Identities = 66/178 (37%), Positives = 101/178 (56%), Gaps = 8/178 (4%) Frame = +3 Query: 156 KAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTG 335 K V K + + DI G ++ I+E V+ +V + + +++ G R PKG+LL GPPGTG Sbjct: 199 KNQAVIVKTDKKFTDIAGNKEPIEE-VQELVDYLKNPKKYAAAGARFPKGILLGGPPGTG 257 Query: 336 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIG 515 KTL+A+A A + N F ++ V++++G GAK VR+ F+ A++ AP IIFIDE+DA+G Sbjct: 258 KTLLAKATAGEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPAIIFIDELDAVG 317 Query: 516 TKRFDSEVSG---DRRSATNYV-----GVAESARWI*Q**ED*R**LQPNRADILDPA 665 R S + G +R N + G+ E+A + NR D+LDPA Sbjct: 318 RSR-GSGIGGGNDEREQTLNQILVEMDGINENAGILIM--------GATNRTDVLDPA 366
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 103 bits (256), Expect = 6e-22 Identities = 53/129 (41%), Positives = 84/129 (65%), Gaps = 2/129 (1%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP-KGVLLYGPPGTGKTLMARACAAQ 368 ++DI GLE L EA+V P + F+ G+R P +G+LL+GPPGTGKT++ARA A + Sbjct: 604 WDDIAGLESAKYSLKEAVVYPFLRPDLFR--GLREPVRGMLLFGPPGTGKTMLARAVATE 661 Query: 369 TNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAI-GTKRFDSEVSG 545 +++TF ++ L ++G+ KLVR F +AK+ +P IIF+DEID+I G++ ++E Sbjct: 662 SHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSIMGSRNNENENES 721 Query: 546 DRRSATNYV 572 RR ++ Sbjct: 722 SRRIKNEFL 730
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 103 bits (256), Expect = 6e-22 Identities = 50/122 (40%), Positives = 75/122 (61%) Frame = +3 Query: 180 PTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARAC 359 P + DIGGLE E+++ I +P+ E F G++ G+L YGPPGTGKTL+A+A Sbjct: 718 PNVFWEDIGGLEMVKGEILDTIDMPLKFPELFAS-GMKKRSGILFYGPPGTGKTLLAKAV 776 Query: 360 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEV 539 A + F + GP+L+ M+IG+ VR F+ A++ PC+IF DE+D++ KR + Sbjct: 777 ATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGD 836 Query: 540 SG 545 SG Sbjct: 837 SG 838
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 102 bits (255), Expect(2) = 7e-22 Identities = 57/136 (41%), Positives = 86/136 (63%), Gaps = 6/136 (4%) Frame = +3 Query: 135 SEYDSRVKAMEVDEKPTE------DYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRP 296 +E + +K+ EV +K + ++D+ G ++ EL E IV + +++ LG + Sbjct: 255 TENTTLLKSSEVADKSVDVAKTNVKFDDVCGCDEARAEL-EEIVDFLKDPTKYESLGGKL 313 Query: 297 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKA 476 PKGVLL GPPGTGKTL+ARA A + F ++G + ++++G GAK +RD F A+ +A Sbjct: 314 PKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRA 373 Query: 477 PCIIFIDEIDAIGTKR 524 P IIFIDE+DAIG KR Sbjct: 374 PAIIFIDELDAIGGKR 389 Score = 20.8 bits (42), Expect(2) = 7e-22 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = +1 Query: 559 QRTMLELLNQLDGFSSDERI 618 ++T+ +LL +LDGFS I Sbjct: 398 KQTLNQLLVELDGFSQTSGI 417
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 102 bits (255), Expect = 8e-22 Identities = 49/123 (39%), Positives = 76/123 (61%) Frame = +3 Query: 174 EKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMAR 353 E P ++D+GGL+ ++L +A+ P+ H F K+GI P +G+LL+GPPG KT +A+ Sbjct: 279 EIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAK 338 Query: 354 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDS 533 A A A+F L+ +L M++G+G L+R+ F+ A+ +P IIF DE D + KR D Sbjct: 339 AAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDE 398 Query: 534 EVS 542 S Sbjct: 399 SSS 401 Score = 85.5 bits (210), Expect = 1e-16 Identities = 49/134 (36%), Positives = 78/134 (58%), Gaps = 4/134 (2%) Frame = +3 Query: 198 DIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 377 +IGG E+ +Q L E I+ P + + + LG++ P+G+LLYGPPGTGKT + RA + +A Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82 Query: 378 TFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKA----PCIIFIDEIDAIGTKRFDSEVSG 545 + L+ + + G+ K++R+AF A A P +IFIDEID + +R D+ Sbjct: 83 HLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRR-DARREQ 141 Query: 546 DRRSATNYVGVAES 587 D R A+ + +S Sbjct: 142 DVRIASQLFTLMDS 155
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 102 bits (255), Expect = 8e-22 Identities = 66/156 (42%), Positives = 92/156 (58%), Gaps = 10/156 (6%) Frame = +3 Query: 99 NKDSYLILDTLPSEYDSR------VKAMEVD---EKPTEDYNDIGGLEKEIQELVEAIVL 251 NK S + +T +D ++A+E D + P ++DI LE+ + L EA+VL Sbjct: 165 NKSSADVSETEVKRFDGSGYDKDLIEALERDIISQNPNIRWDDIADLEEAKKLLKEAVVL 224 Query: 252 PMTHKEQFQKLGIRPP-KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 428 PM E F+ GIR P KGVL+ GPPGTGKTL+A+A A + TF ++ L + G+ Sbjct: 225 PMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGE 282 Query: 429 GAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSE 536 KLVR FE+A+ AP IFIDEID+I ++R SE Sbjct: 283 SEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSE 318
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 102 bits (253), Expect = 1e-21 Identities = 51/117 (43%), Positives = 73/117 (62%), Gaps = 5/117 (4%) Frame = +3 Query: 189 DYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQ 368 +++DIGGL+ I +L E + LP+ + E +Q I PP+GVL +GPPGTGKTLMARA AA Sbjct: 411 NFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAAS 470 Query: 369 TNA-----TFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 ++ TF G ++ ++G+ + +R FE AK+ P IIF DEID + R Sbjct: 471 CSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVR 527
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 100 bits (250), Expect = 3e-21 Identities = 49/154 (31%), Positives = 87/154 (56%), Gaps = 8/154 (5%) Frame = +3 Query: 108 SYLILDTLPSEYDSRVK--------AMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTH 263 S+ L PS++D + ++ P ++D+GG+E +++++ I P+ + Sbjct: 682 SHGTLQLTPSDFDDAIADARQKYSDSIGAPRIPNVGWDDVGGMEGVKKDILDTIETPLKY 741 Query: 264 KEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 443 F G++ G+L YGPPGTGKTL+A+A A + F + GP+L+ M+IG+ V Sbjct: 742 PHWFSD-GVKKRSGILFYGPPGTGKTLLAKAIATTFSLNFFSVKGPELLNMYIGESEANV 800 Query: 444 RDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSG 545 R F+ A++ PC++F DE+D++ +R + SG Sbjct: 801 RRVFQKARDAKPCVVFFDELDSVAPQRGNQGDSG 834
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 99.8 bits (247), Expect = 7e-21 Identities = 64/156 (41%), Positives = 92/156 (58%), Gaps = 10/156 (6%) Frame = +3 Query: 99 NKDSYLILDTLPSEYDSR------VKAMEVD---EKPTEDYNDIGGLEKEIQELVEAIVL 251 NK + + +++DS V+A+E D + P ++DI L + + L EA+VL Sbjct: 168 NKSPAAVTEPETNKFDSTGYDKDLVEALERDIISQNPNVRWDDIADLVEAKKLLKEAVVL 227 Query: 252 PMTHKEQFQKLGIRPP-KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 428 PM E F+ GIR P KGVL+ GPPGTGKTL+A+A A + TF ++ L + G+ Sbjct: 228 PMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGE 285 Query: 429 GAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSE 536 KLVR FE+A+ +P IFIDEID+I ++R SE Sbjct: 286 SEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSE 321
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 99.4 bits (246), Expect = 9e-21 Identities = 48/136 (35%), Positives = 81/136 (59%) Frame = +3 Query: 117 ILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRP 296 ++ T P D + + E ++D+ G ++ +ELV+ + + + E+F ++G + Sbjct: 142 LVGTFPKFLDQNIGSFA--ENTDVSFSDVQGCDEVKKELVDVVEF-LRNPEKFNQIGAKL 198 Query: 297 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKA 476 PKGVLL GPPG GKTL+A+A + + FL +G ++ +G GA +R F AK+ + Sbjct: 199 PKGVLLVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNS 258 Query: 477 PCIIFIDEIDAIGTKR 524 PC++FIDEID++G R Sbjct: 259 PCLVFIDEIDSVGGNR 274
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 98.6 bits (244), Expect = 1e-20 Identities = 64/147 (43%), Positives = 87/147 (59%), Gaps = 6/147 (4%) Frame = +3 Query: 132 PSEYDSR-VKAME---VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP 299 P+ YD V+ +E V P + DI GL + + L EA+VLP+ + F+ GIR P Sbjct: 209 PAGYDKDLVENLERDIVQRNPNVHWADIAGLTEAKRLLEEAVVLPLWMPDYFK--GIRRP 266 Query: 300 -KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKA 476 KGVL+ GPPGTGKT++A+A A + TF ++ L + G+ KLVR FE+A+ A Sbjct: 267 WKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYA 326 Query: 477 PCIIFIDEIDAIGTKR-FDSEVSGDRR 554 P IFIDEID+I +KR SE RR Sbjct: 327 PSTIFIDEIDSICSKRGTGSEHEASRR 353
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 98.6 bits (244), Expect = 1e-20 Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 4/132 (3%) Frame = +3 Query: 153 VKAME---VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP-KGVLLYG 320 V+A+E V P+ ++DI LE+ + L EA+VLPM + F+ GIR P KGVL+ G Sbjct: 191 VEALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVG 248 Query: 321 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDE 500 PPGTGKT++A+A A + TF ++ L + G+ KLVR FE+A+ AP IFIDE Sbjct: 249 PPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDE 308 Query: 501 IDAIGTKRFDSE 536 ID+I ++R S+ Sbjct: 309 IDSICSRRGTSD 320
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 98.6 bits (244), Expect = 1e-20 Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 4/132 (3%) Frame = +3 Query: 153 VKAME---VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP-KGVLLYG 320 V+A+E V P+ ++DI LE+ + L EA+VLPM + F+ GIR P KGVL+ G Sbjct: 189 VEALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVG 246 Query: 321 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDE 500 PPGTGKT++A+A A + TF ++ L + G+ KLVR FE+A+ AP IFIDE Sbjct: 247 PPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDE 306 Query: 501 IDAIGTKRFDSE 536 ID+I ++R S+ Sbjct: 307 IDSICSRRGTSD 318
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 98.6 bits (244), Expect = 1e-20 Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 4/132 (3%) Frame = +3 Query: 153 VKAME---VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP-KGVLLYG 320 V+A+E V P+ ++DI LE+ + L EA+VLPM + F+ GIR P KGVL+ G Sbjct: 189 VEALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVG 246 Query: 321 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDE 500 PPGTGKT++A+A A + TF ++ L + G+ KLVR FE+A+ AP IFIDE Sbjct: 247 PPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDE 306 Query: 501 IDAIGTKRFDSE 536 ID+I ++R S+ Sbjct: 307 IDSICSRRGTSD 318
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 98.2 bits (243), Expect = 2e-20 Identities = 48/111 (43%), Positives = 69/111 (62%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 371 ++ IGGL + Q L++ I LP + E F L IR G+LLYGPPGTGKTL+A A ++ Sbjct: 839 WDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARES 898 Query: 372 NATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 F+ + GP+L+ +IG + VRD F A+ PCI+F DE ++I +R Sbjct: 899 RMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRR 949
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 98.2 bits (243), Expect = 2e-20 Identities = 53/120 (44%), Positives = 76/120 (63%), Gaps = 1/120 (0%) Frame = +3 Query: 168 VDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP-KGVLLYGPPGTGKTL 344 +D P ++D+ GL + + L EA+VLP+ E FQ GIR P KGVL++GPPGTGKTL Sbjct: 230 LDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTGKTL 287 Query: 345 MARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 +A+A A + TF ++ L + G+ ++VR F+LA+ AP IFIDEID++ R Sbjct: 288 LAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR 347
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 97.4 bits (241), Expect = 3e-20 Identities = 51/128 (39%), Positives = 77/128 (60%), Gaps = 3/128 (2%) Frame = +3 Query: 135 SEYDSRVKAMEVDEKPTE-DYNDIGGLEKEIQELVEAIVLPMTHKEQFQ--KLGIRPPKG 305 +EY+ + + VD + + + D+ GL++ I E+ + ++LP + F KL ++PPKG Sbjct: 73 TEYEMNIATLLVDPRSIKVTWRDVAGLDEIISEMQDTVILPFQKRHLFSGSKL-LQPPKG 131 Query: 306 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCI 485 VLLYGPPG GKTL+A+A A + F+ L L + G+ KL F LA + PCI Sbjct: 132 VLLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCI 191 Query: 486 IFIDEIDA 509 IF+DEID+ Sbjct: 192 IFLDEIDS 199
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 97.4 bits (241), Expect = 3e-20 Identities = 60/139 (43%), Positives = 86/139 (61%), Gaps = 2/139 (1%) Frame = +3 Query: 162 MEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP-KGVLLYGPPGTGK 338 M + + T +DI G+ Q L EA+ LP+ E FQ G+R P K ++L GPPGTGK Sbjct: 182 MATNTENTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGK 239 Query: 339 TLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGT 518 TL+ARA A+++++TF ++ L + GD K+VR FELA+ AP IIFIDEID +G Sbjct: 240 TLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGG 299 Query: 519 KRFDS-EVSGDRRSATNYV 572 +R +S E RR + ++ Sbjct: 300 QRGNSGEHEASRRVKSEFL 318
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 97.4 bits (241), Expect = 3e-20 Identities = 60/132 (45%), Positives = 82/132 (62%), Gaps = 4/132 (3%) Frame = +3 Query: 153 VKAMEVD---EKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP-KGVLLYG 320 V+A+E D + P + DI L + + L EA+VLPM E F+ GIR P KGVL+ G Sbjct: 192 VEALERDIISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRPWKGVLMVG 249 Query: 321 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDE 500 PPGTGKTL+A+A A + TF ++ L + G+ KLVR FE+A+ +P IFIDE Sbjct: 250 PPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDE 309 Query: 501 IDAIGTKRFDSE 536 ID+I ++R SE Sbjct: 310 IDSICSRRGTSE 321
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 97.4 bits (241), Expect = 3e-20 Identities = 60/132 (45%), Positives = 82/132 (62%), Gaps = 4/132 (3%) Frame = +3 Query: 153 VKAMEVD---EKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPP-KGVLLYG 320 V+A+E D + P + DI L + + L EA+VLPM E F+ GIR P KGVL+ G Sbjct: 192 VEALERDIISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRPWKGVLMVG 249 Query: 321 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDE 500 PPGTGKTL+A+A A + TF ++ L + G+ KLVR FE+A+ +P IFIDE Sbjct: 250 PPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDE 309 Query: 501 IDAIGTKRFDSE 536 ID+I ++R SE Sbjct: 310 IDSICSRRGTSE 321
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 96.7 bits (239), Expect = 6e-20 Identities = 55/136 (40%), Positives = 79/136 (58%), Gaps = 2/136 (1%) Frame = +3 Query: 135 SEYDSRVKAMEVDEKPTE-DYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGI-RPPKGV 308 SEY+ + A VD + ++DI GL++ I EL + ++LP+ + F+ + +PPKGV Sbjct: 74 SEYEMSIAAHLVDPLTMQITWHDIAGLDEVITELKDTVILPIQKRHLFEGSRLLQPPKGV 133 Query: 309 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCII 488 LLYGPPG GKTL+A+A A + F+ L L + G+ KL F LA + P II Sbjct: 134 LLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSII 193 Query: 489 FIDEIDAIGTKRFDSE 536 FIDEID+ R S+ Sbjct: 194 FIDEIDSFLRNRSSSD 209
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 96.3 bits (238), Expect = 7e-20 Identities = 57/163 (34%), Positives = 83/163 (50%), Gaps = 9/163 (5%) Frame = +3 Query: 63 PDNLKPGDLVGVNKDSYLI----LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQE 230 P N + +L G+ KD I D P + DS V+ ++ +GGL I Sbjct: 389 PLNFRKDELKGIYKDRMKIGASLADVDPMQLDSSVR-----------FDSVGGLSNHIAA 437 Query: 231 LVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTN-----ATFLKLA 395 L E +V P+ + E F+K I+PP+G L YGPPGTGKTL+ARA A + + F Sbjct: 438 LKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRK 497 Query: 396 GPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 G + ++G+ + +R F+ A + P IIF DEID + R Sbjct: 498 GADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVR 540
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 96.3 bits (238), Expect = 7e-20 Identities = 57/163 (34%), Positives = 83/163 (50%), Gaps = 9/163 (5%) Frame = +3 Query: 63 PDNLKPGDLVGVNKDSYLI----LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQE 230 P N + +L G+ KD I D P + DS V+ ++ +GGL I Sbjct: 220 PLNFRKDELKGIYKDRMKIGASLADVDPMQLDSSVR-----------FDSVGGLSNHIAA 268 Query: 231 LVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTN-----ATFLKLA 395 L E +V P+ + E F+K I+PP+G L YGPPGTGKTL+ARA A + + F Sbjct: 269 LKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRK 328 Query: 396 GPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 G + ++G+ + +R F+ A + P IIF DEID + R Sbjct: 329 GADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVR 371
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 96.3 bits (238), Expect = 7e-20 Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 2/136 (1%) Frame = +3 Query: 135 SEYDSRVKAMEVDEKPTE-DYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGI-RPPKGV 308 SEY+ + A VD ++DI GL+ I +L + ++LP+ K F+ + +PPKGV Sbjct: 70 SEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGV 129 Query: 309 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCII 488 LLYGPPG GKTL+A+A A + F+ L L + G+ KL F LA + P II Sbjct: 130 LLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSII 189 Query: 489 FIDEIDAIGTKRFDSE 536 FIDEID+ R S+ Sbjct: 190 FIDEIDSFLRNRSSSD 205
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 96.3 bits (238), Expect = 7e-20 Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 2/136 (1%) Frame = +3 Query: 135 SEYDSRVKAMEVDEKPTE-DYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGI-RPPKGV 308 SEY+ + A VD ++DI GL+ I +L + ++LP+ K F+ + +PPKGV Sbjct: 70 SEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGV 129 Query: 309 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCII 488 LLYGPPG GKTL+A+A A + F+ L L + G+ KL F LA + P II Sbjct: 130 LLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSII 189 Query: 489 FIDEIDAIGTKRFDSE 536 FIDEID+ R S+ Sbjct: 190 FIDEIDSFLRNRSSSD 205
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 96.3 bits (238), Expect = 7e-20 Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 2/136 (1%) Frame = +3 Query: 135 SEYDSRVKAMEVDEKPTE-DYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGI-RPPKGV 308 SEY+ + A VD ++DI GL+ I +L + ++LP+ K F+ + +PPKGV Sbjct: 70 SEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGV 129 Query: 309 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCII 488 LLYGPPG GKTL+A+A A + F+ L L + G+ KL F LA + P II Sbjct: 130 LLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSII 189 Query: 489 FIDEIDAIGTKRFDSE 536 FIDEID+ R S+ Sbjct: 190 FIDEIDSFLRNRSSSD 205
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 94.4 bits (233), Expect = 3e-19 Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 9/163 (5%) Frame = +3 Query: 63 PDNLKPGDLVGVNKDSYLI----LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQE 230 P N + ++ G+ KD I D P + D+ V+ ++ +GGL I Sbjct: 44 PLNFRKDEIRGIYKDRMKIGASLADVDPMQLDTSVR-----------FDSVGGLSSHIAA 92 Query: 231 LVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTN-----ATFLKLA 395 L E +V P+ + E F+K I+PP+G L YGPPGTGKTL+ARA A + + F Sbjct: 93 LKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSRGDKRVAFFMRK 152 Query: 396 GPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 G + ++G+ + +R F+ A + P IIF DEID + R Sbjct: 153 GADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGLAPVR 195
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 93.6 bits (231), Expect = 5e-19 Identities = 47/117 (40%), Positives = 67/117 (57%) Frame = +3 Query: 174 EKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMAR 353 +K ++DIGGL L+E + P + F +R G+LLYG PG GKTL+A Sbjct: 792 QKSDVRWDDIGGLRDAKSILLETLEWPTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLAS 851 Query: 354 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKR 524 A AAQ F+ + GP+++ +IG + VR+ FE A+ PCI+F DE D+I KR Sbjct: 852 AVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKR 908 Score = 31.2 bits (69), Expect = 2.9 Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 3/109 (2%) Frame = +3 Query: 252 PMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACA--AQTNATFLKLAG-PQLVQMFI 422 P + + L G LL+G G+GK+L+ A F+KL +++ Sbjct: 501 PTAQENLIESLSKIASGGSLLFGTSGSGKSLVISQVAQIVTNKGHFVKLLNCDKIMSESY 560 Query: 423 GDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRRSATNY 569 + + D F KAP ++ ++++D++ + S R + Y Sbjct: 561 NNLRGIFEDIFSEVSWKAPSLLILEDLDSLIPAEQEHSDSSQSRQLSEY 609
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 93.6 bits (231), Expect = 5e-19 Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 1/126 (0%) Frame = +3 Query: 135 SEYDSRVKAMEVD-EKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVL 311 SE++ R+ V E D+++IGG E+ + EL + I+LP+ Q + PP+G+L Sbjct: 62 SEHEIRIATQFVGGEDVGADWDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGIL 121 Query: 312 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIF 491 LYGPPG GKTL+A+A A F+ L L + G+ KL F +A++ P IIF Sbjct: 122 LYGPPGCGKTLLAKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIF 181 Query: 492 IDEIDA 509 IDEID+ Sbjct: 182 IDEIDS 187
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 93.2 bits (230), Expect = 6e-19 Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 5/131 (3%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 S + M VD + ++ +GGL IQ L E ++ PM + E F+K I PPKGV+ YGPP Sbjct: 377 SDIDPMSVDS--SVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPP 434 Query: 327 GTGKTLMARACAAQ-----TNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIF 491 GTGKTL+ARA A + F G + ++G+ + +R F+ A P IIF Sbjct: 435 GTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIF 494 Query: 492 IDEIDAIGTKR 524 DEID + R Sbjct: 495 FDEIDGLAPVR 505
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 92.0 bits (227), Expect = 1e-18 Identities = 45/116 (38%), Positives = 72/116 (62%), Gaps = 1/116 (0%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGI-RPPKGVLLYGPPGTGKTLMARACAAQ 368 + DIGGL+ I +L E+++ P+ E + + + P GVLLYGPPG GKT++A+A A + Sbjct: 90 FQDIGGLDPLISDLHESVIYPLMMPEVYSNSPLLQAPSGVLLYGPPGCGKTMLAKALAKE 149 Query: 369 TNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSE 536 + A F+ + ++ + G+ K+V F LA + PCIIFIDEID+ +R ++ Sbjct: 150 SGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFLRERSSTD 205
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 90.5 bits (223), Expect = 4e-18 Identities = 45/126 (35%), Positives = 71/126 (56%) Frame = +3 Query: 147 SRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPP 326 S ++ +++ ++ + DIG L L+E + P ++ F +R G+LLYG P Sbjct: 681 SALRGVKLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYP 740 Query: 327 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEID 506 G GKTL+A A A Q F+ + GP+++ FIG + +R+ FE A+ PCI+F DE D Sbjct: 741 GCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFD 800 Query: 507 AIGTKR 524 +I KR Sbjct: 801 SIAPKR 806
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 75.5 bits (184), Expect = 1e-13 Identities = 35/90 (38%), Positives = 53/90 (58%) Frame = +3 Query: 297 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKA 476 P+ VL +G PGTGKT++A++ A + + L+ +GDGA+ + + +ELA + A Sbjct: 157 PRNVLFHGSPGTGKTMLAKSLANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTA 216 Query: 477 PCIIFIDEIDAIGTKRFDSEVSGDRRSATN 566 P +IFIDE+DAIG R + GD N Sbjct: 217 PSVIFIDEMDAIGLDRRFQSLRGDVSEVVN 246
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 75.5 bits (184), Expect = 1e-13 Identities = 35/90 (38%), Positives = 53/90 (58%) Frame = +3 Query: 297 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKA 476 P+ VL +G PGTGKT++A++ A + + L+ +GDGA+ + + +ELA + A Sbjct: 157 PRNVLFHGSPGTGKTMLAKSLANELKVPLYLIKATSLIGEHVGDGARQIHELYELASKTA 216 Query: 477 PCIIFIDEIDAIGTKRFDSEVSGDRRSATN 566 P +IFIDE+DAIG R + GD N Sbjct: 217 PSVIFIDEMDAIGLDRRYQSLRGDVSEVVN 246
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 74.7 bits (182), Expect = 2e-13 Identities = 47/114 (41%), Positives = 63/114 (55%), Gaps = 10/114 (8%) Frame = +3 Query: 201 IGGLEKEIQELVE-AIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 377 IGGL+KE + A + E ++LGI+ KG+LLYGPPGTGKTLMAR NA Sbjct: 225 IGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNA 284 Query: 378 TFLKLA-GPQLVQMFIGDGAKLVRDAFELAKEKAP--------CIIFIDEIDAI 512 K+ GPQ++ ++G+ +R F A+E+ II DEIDAI Sbjct: 285 REPKIVNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAI 338 Score = 30.8 bits (68), Expect = 3.8 Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 1/98 (1%) Frame = +3 Query: 222 IQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGP 401 + EL+E +L + + + G+ VL+ G P +GK+ +A A ++ F+K+ P Sbjct: 519 VTELLEDGMLSVQQAKATESSGL---VSVLIEGAPNSGKSALAANLAQLSDFPFVKVCSP 575 Query: 402 QLVQMFIGDGAKL-VRDAFELAKEKAPCIIFIDEIDAI 512 + + F L +R F+ A I +D ++ + Sbjct: 576 EDMVGFTESAKCLHIRKIFDDAYRSTLSCIVVDNVERL 613
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 74.7 bits (182), Expect = 2e-13 Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 7/118 (5%) Frame = +3 Query: 192 YNDIGGLEKEIQELVEAIVL------PMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMAR 353 + DI G++K + EL E ++ TH E P G+LL GPPGTGKTL+ + Sbjct: 973 FTDIVGIQKVLLELYEIVLFLRNSGRNFTHSETL-------PHGILLTGPPGTGKTLLVQ 1025 Query: 354 ACAAQTNATFLKLAGPQLVQMFIGDGAKL-VRDAFELAKEKAPCIIFIDEIDAIGTKR 524 A A + + L+G L++ G+ A ++ F+ A++ APCI+FIDEID + +KR Sbjct: 1026 ALAGEAQVPVIVLSGSSLMEP--GESAAFKLQLVFQEARQLAPCIVFIDEIDTLSSKR 1081
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 74.3 bits (181), Expect = 3e-13 Identities = 48/118 (40%), Positives = 64/118 (54%), Gaps = 10/118 (8%) Frame = +3 Query: 201 IGGLEKEIQELVE-AIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 377 IGGL+KE + A + E ++LG + KG+LLYGPPGTGKTLMAR NA Sbjct: 220 IGGLDKEFNSIFRRAFASRVFPPELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNA 279 Query: 378 TFLKLA-GPQLVQMFIGDGAKLVRDAFELAKEKAP--------CIIFIDEIDAIGTKR 524 K+ GPQ++ ++G+ VR F A+E+ II DEIDAI +R Sbjct: 280 REPKIVNGPQILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQR 337 Score = 30.0 bits (66), Expect = 6.5 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = +3 Query: 306 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKL-VRDAFELAKEKAPC 482 VL+ G P +GKT +A A ++ F+K+ P+ + + L +R F+ A Sbjct: 539 VLVAGAPNSGKTALAAQLAKMSDFPFVKVCSPEDMVGYTESAKCLHIRKIFDDAYRSMLS 598 Query: 483 IIFIDEIDAI 512 I +D ++ + Sbjct: 599 CIVVDNVERL 608
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 70.9 bits (172), Expect = 3e-12 Identities = 46/121 (38%), Positives = 62/121 (51%), Gaps = 10/121 (8%) Frame = +3 Query: 201 IGGLEKEIQELVE-AIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 377 IGGL+ E + A + +KLGI KG+LLYGPPGTGKTL+AR NA Sbjct: 271 IGGLDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNA 330 Query: 378 TFLKLA-GPQLVQMFIGDGAKLVRDAF--------ELAKEKAPCIIFIDEIDAIGTKRFD 530 K+ GP+++ ++G + VR F + +E II DE+DAI KR Sbjct: 331 REPKIVNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDAICKKRGS 390 Query: 531 S 533 S Sbjct: 391 S 391 Score = 32.3 bits (72), Expect = 1.3 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = +3 Query: 306 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ-LVQMFIGDGAKLVRDAFELAKEKAPC 482 VLL GP +GKT +A A + F+KL + +V M V FE + + Sbjct: 588 VLLSGPIASGKTALAATIALGSEFPFVKLVSAESMVGMNENARVAHVNRVFEDSYKSPLS 647 Query: 483 IIFIDEIDAI 512 +I +DEI+ I Sbjct: 648 VIVVDEIERI 657
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 70.5 bits (171), Expect = 4e-12 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 10/118 (8%) Frame = +3 Query: 201 IGGLEKEIQELVEAIVLPMTHKEQF-QKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 377 IGGL+ E + +F ++LG++ +G+LL+GPPGTGKTLMAR NA Sbjct: 297 IGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNA 356 Query: 378 TFLKLA-GPQLVQMFIGDGAKLVRDAFELAKEK-APC-------IIFIDEIDAIGTKR 524 K+ GPQ++ ++G+ VR F A+E+ C II DEIDAI +R Sbjct: 357 REPKIVNGPQILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQR 414 Score = 32.7 bits (73), Expect = 1.0 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = +3 Query: 306 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK--LVRDAFELAKEKAP 479 V+L G TGKT +A A ++ F+K+ P+ F + AK ++ AFE AK Sbjct: 616 VVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGF-SESAKCMALKKAFEDAKRSKL 674 Query: 480 CIIFIDEIDAI 512 ++ ID ++ + Sbjct: 675 SVLLIDNLERL 685
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 69.7 bits (169), Expect = 7e-12 Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 10/118 (8%) Frame = +3 Query: 201 IGGLEKEIQELVE-AIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 377 +GGL+KE ++ A + +KLGI KG+LLYGPPGTGKTL+AR NA Sbjct: 241 VGGLDKEFTKIFRRAFASRIFPPSVIEKLGISHVKGLLLYGPPGTGKTLIARKIGTMLNA 300 Query: 378 TFLKLA-GPQLVQMFIGDGAKLVRDAFELA--------KEKAPCIIFIDEIDAIGTKR 524 K+ GP+++ ++G + +R+ F+ A +E + II DE+D++ +R Sbjct: 301 KEPKIVNGPEILSKYVGSSEENIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQR 358 Score = 32.7 bits (73), Expect = 1.0 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = +3 Query: 306 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKL--VRDAFELAKEKAP 479 +L++GP G+GKT +A A ++ F++L P + + + AK+ + + F A + Sbjct: 560 LLIHGPAGSGKTALAAEIALKSGFPFIRLISPNELS-GMSESAKIAYIDNTFRDAYKSPL 618 Query: 480 CIIFIDEIDAI 512 I+ ID ++ + Sbjct: 619 NILVIDSLETL 629
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 69.3 bits (168), Expect = 1e-11 Identities = 45/136 (33%), Positives = 66/136 (48%) Frame = +3 Query: 117 ILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRP 296 I + L + +D + ++ + DIGG+E QEL L + K Sbjct: 323 IKNNLKNIHDIEISTIQKFVAKAITFRDIGGMESLKQELATVAFL-LKQKNYSNSY---- 377 Query: 297 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKA 476 P G L GPPGTGKTLMA+A + + +L + G Q G V D F+ + + Sbjct: 378 PMGYLFAGPPGTGKTLMAKAMSYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNIS 437 Query: 477 PCIIFIDEIDAIGTKR 524 PCI++IDEID+I +R Sbjct: 438 PCILYIDEIDSIAERR 453
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 68.2 bits (165), Expect = 2e-11 Identities = 39/130 (30%), Positives = 66/130 (50%) Frame = +3 Query: 177 KPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARA 356 +P + NDI ++ L+ +V ++ ++ G++ +L GPPG GKTL A Sbjct: 79 EPEHNRNDIVLSAANVRVLL-GLVKEFRRADEIRQHGLKVRSKMLFCGPPGCGKTLCAEI 137 Query: 357 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSE 536 AA+ ++ +L+ ++G+ A +R FE A+ K PC++F DE DA+ R DS Sbjct: 138 FAAELGLPLFRVKLDRLISSYLGETATNIRKTFEFAR-KQPCVLFFDEFDALARTRDDSG 196 Query: 537 VSGDRRSATN 566 + R N Sbjct: 197 EHNELRRVVN 206
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 67.8 bits (164), Expect = 3e-11 Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 10/118 (8%) Frame = +3 Query: 201 IGGLEKEIQELVE-AIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 377 IGGL+KE ++ A + E +++G + KG+LLYGPPG GKTL+AR NA Sbjct: 220 IGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNA 279 Query: 378 TFLKLA-GPQLVQMFIGDGAKLVRDAFELAKEK--------APCIIFIDEIDAIGTKR 524 K+ GP+++ ++G+ +R F A+E+ II DEIDAI +R Sbjct: 280 REPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR 337 Score = 37.0 bits (84), Expect = 0.053 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +3 Query: 294 PPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDG-----AKLVRDAFE 458 P VLL GPP +GKT +A A ++N F+K+ P + F K+ DA+ Sbjct: 535 PLVSVLLEGPPHSGKTAVAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAY- 593 Query: 459 LAKEKAPCIIFIDEIDAI 512 K + C++ +D+I+ + Sbjct: 594 --KSQLSCVV-VDDIERL 608
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 67.8 bits (164), Expect = 3e-11 Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 10/118 (8%) Frame = +3 Query: 201 IGGLEKEIQELVE-AIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 377 IGGL+KE ++ A + E +++G + KG+LLYGPPG GKTL+AR NA Sbjct: 220 IGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNA 279 Query: 378 TFLKLA-GPQLVQMFIGDGAKLVRDAFELAKEK--------APCIIFIDEIDAIGTKR 524 K+ GP+++ ++G+ +R F A+E+ II DEIDAI +R Sbjct: 280 REPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR 337 Score = 37.4 bits (85), Expect = 0.041 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +3 Query: 294 PPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDG-----AKLVRDAFE 458 P VLL GPP +GKT +A A ++N F+K+ P + F K+ DA+ Sbjct: 535 PLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAY- 593 Query: 459 LAKEKAPCIIFIDEIDAI 512 K + C++ +D+I+ + Sbjct: 594 --KSQLSCVV-VDDIERL 608
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 67.4 bits (163), Expect = 4e-11 Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 10/118 (8%) Frame = +3 Query: 201 IGGLEKEIQELVE-AIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 377 IGGL E ++ A + +LGI+ KG+LL+GPPGTGKTLMAR N Sbjct: 217 IGGLGAEFADIFRRAFASRVFPPHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNG 276 Query: 378 TFLKLA-GPQLVQMFIGDGAKLVRDAFELAKEKAPC--------IIFIDEIDAIGTKR 524 K+ GP+++ F+G+ K VRD F A++ +I DEIDAI R Sbjct: 277 KDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSR 334 Score = 29.6 bits (65), Expect = 8.5 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = +3 Query: 309 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQ-LVQMFIGDGAKLVRDAFELAKEKAPCI 485 LL GP G+GKT +A ++ ++K+ + ++ + + FE A + I Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETMIGLSESTKCAHIVKVFEDAYKSPMSI 593 Query: 486 IFIDEIDAI 512 I +D+I+ + Sbjct: 594 IILDDIERL 602
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 66.6 bits (161), Expect = 6e-11 Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 10/118 (8%) Frame = +3 Query: 201 IGGLEKEIQELVE-AIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 377 IGGL+KE ++ A + E +++G KG+LLYGPPG GKTL+AR NA Sbjct: 220 IGGLDKEFSDIFRRAFAFRVFPPEIVEQMGCIHVKGILLYGPPGCGKTLLARQIGKMLNA 279 Query: 378 TFLKLA-GPQLVQMFIGDGAKLVRDAFELAKEK--------APCIIFIDEIDAIGTKR 524 K+ GP+++ ++G+ +R F A+E+ II DEIDAI +R Sbjct: 280 REPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR 337 Score = 37.4 bits (85), Expect = 0.041 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +3 Query: 294 PPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDG-----AKLVRDAFE 458 P VLL GPP +GKT +A A ++N F+K+ P + F K+ DA+ Sbjct: 535 PLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAY- 593 Query: 459 LAKEKAPCIIFIDEIDAI 512 K + C++ +D+I+ + Sbjct: 594 --KSQLSCVV-VDDIERL 608
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 63.9 bits (154), Expect = 4e-10 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 2/131 (1%) Frame = +3 Query: 120 LDTLPSEYDSRVKAMEVDE--KPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIR 293 LD + E + ++ E P +DIGGL E++ ++ + ++ ++ G+ Sbjct: 217 LDLVFKEKQQLISQTQILEFYNPVTKISDIGGLN-ELKSWLK--FRAASFSKRAEEYGLP 273 Query: 294 PPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEK 473 PKG+LL G GTGK+L A++ A + N LKL +L IG+ VR + A+ Sbjct: 274 IPKGLLLVGIQGTGKSLTAKSIANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAETI 333 Query: 474 APCIIFIDEID 506 +PCI++IDEID Sbjct: 334 SPCILWIDEID 344
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 63.5 bits (153), Expect = 5e-10 Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 13/128 (10%) Frame = +3 Query: 201 IGGLEKEIQELVEAI----VLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQ 368 IGGL+ E Q++ +LP E +KL + KG+LLYGPPGTGKTL+AR + Sbjct: 277 IGGLDAEFQDIFRRAFNSRILP---PELAEKLDYKHCKGLLLYGPPGTGKTLIARKLSKM 333 Query: 369 TNATFLKLA-GPQLVQMFIGDGAKLVRDAFELAKEKAPC--------IIFIDEIDAIGTK 521 N K+ GP+++ ++G + +R+ F+ A+ + +I DE+D++ + Sbjct: 334 LNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYKLKGEDSDLHVIIFDELDSVFKQ 393 Query: 522 RFDSEVSG 545 R + G Sbjct: 394 RGSGKSDG 401 Score = 37.0 bits (84), Expect = 0.053 Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 2/73 (2%) Frame = +3 Query: 300 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKL--VRDAFELAKEK 473 + +LLYGPPG GKT +A A ++ F+K+ + + + +G+ K+ + + F + Sbjct: 594 RSILLYGPPGVGKTSIATTLALNSDFPFIKMLSAETL-VGMGELRKIQEIDNVFRDVHKS 652 Query: 474 APCIIFIDEIDAI 512 ++ ID+I+ I Sbjct: 653 PLNVLVIDKIENI 665
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 58.9 bits (141), Expect = 1e-08 Identities = 37/124 (29%), Positives = 62/124 (50%) Frame = +3 Query: 174 EKPTEDYNDIGGLEKEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMAR 353 +K TED + L+ +++ + +Q GI PKG+LL G GTGK+L A+ Sbjct: 224 KKATEDIGGLDALKSWLKKRSRSF------SKQSFNYGIPTPKGLLLVGIQGTGKSLTAK 277 Query: 354 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDS 533 A A L+L +L +G+ +R+ +A+ +PC+++IDEID + + Sbjct: 278 AIANDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCVLWIDEIDKAFSNLYSQ 337 Query: 534 EVSG 545 SG Sbjct: 338 GDSG 341
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 58.2 bits (139), Expect = 2e-08 Identities = 36/110 (32%), Positives = 57/110 (51%) Frame = +3 Query: 270 QFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 449 Q G+ P+G+LL G GTGK+L A+A A + LKL +L +G+ +R Sbjct: 250 QASNYGLPTPRGLLLIGIQGTGKSLTAKAIATEWQLPLLKLDVGRLFGGIVGESESRLRQ 309 Query: 450 AFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRRSATNYVGVAESARWI 599 ++A+ +PCI++IDE+D K F + S +N V +A W+ Sbjct: 310 MIDVAETLSPCILWIDEMD----KAFSNNDSRGDSGTSNRV-LATFISWL 354
>ATD3B_HUMAN (Q5T9A4) ATPase family AAA domain-containing protein 3B| Length = 648 Score = 54.3 bits (129), Expect = 3e-07 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 10/124 (8%) Frame = +3 Query: 225 QELVEAIVLPMTHKEQFQKLGIRPP---------KGVLLYGPPGTGKTLMARACAAQTNA 377 Q+++E +VL + + + + + I + +LLYGPPGTGKTL A+ A + Sbjct: 312 QDVLEGVVLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFAKKLALHSGM 371 Query: 378 TFLKLAGPQLVQMFIGDGAKLVRDAFELAK-EKAPCIIFIDEIDAIGTKRFDSEVSGDRR 554 + + G + M +G + F+ A + ++F+DE DA KR E+S D R Sbjct: 372 DYAIMTGGDVAPMG-REGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRATEEISKDLR 430 Query: 555 SATN 566 + N Sbjct: 431 ATLN 434
>ATAD3_MOUSE (Q925I1) ATPase family AAA domain-containing protein 3 (AAA-ATPase| TOB3) Length = 591 Score = 53.5 bits (127), Expect = 5e-07 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Frame = +3 Query: 300 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAK-EKA 476 + VL+YGPPGTGKTL A+ A + + + G + M +G + F+ A + Sbjct: 345 RNVLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMG-REGVTAMHKVFDWASTSRR 403 Query: 477 PCIIFIDEIDAIGTKRFDSEVSGDRRSATN 566 ++F+DE DA KR ++S D R+ N Sbjct: 404 GLLLFVDEADAFLRKRATEKISEDLRATLN 433
>ATD3A_HUMAN (Q9NVI7) ATPase family AAA domain-containing protein 3A| Length = 634 Score = 52.8 bits (125), Expect = 9e-07 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Frame = +3 Query: 300 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAK-EKA 476 + +L+YGPPGTGKTL A+ A + + + G + M +G + F+ A + Sbjct: 394 RNILMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMG-REGVTAMHKLFDWANTSRR 452 Query: 477 PCIIFIDEIDAIGTKRFDSEVSGDRRSATN 566 ++F+DE DA KR ++S D R+ N Sbjct: 453 GLLLFVDEADAFLRKRATEKISEDLRATLN 482
>CLPX_TREDE (Q73M37) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 415 Score = 45.4 bits (106), Expect = 1e-04 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 6/87 (6%) Frame = +3 Query: 306 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM-FIGDGA-----KLVRDAFELAK 467 VLL GP G+GKTL+A+ A + F L + ++G+ KL+++A K Sbjct: 112 VLLLGPTGSGKTLLAKTLAQKMQVPFAIADATTLTEAGYVGEDVENILLKLIQNANGDIK 171 Query: 468 EKAPCIIFIDEIDAIGTKRFDSEVSGD 548 E IIFIDEID I K + ++ D Sbjct: 172 EAEMGIIFIDEIDKISRKSENVSITRD 198
>RUVB_EHRCJ (Q3YRD9) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 329 Score = 45.1 bits (105), Expect = 2e-04 Identities = 30/70 (42%), Positives = 36/70 (51%) Frame = +3 Query: 294 PPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEK 473 P VLLYGPPG GKT +A A + F AGP L + GD A + L + Sbjct: 50 PMDHVLLYGPPGLGKTTLAHIIAKELKVNFRSTAGPLLSK--AGDLAAI------LTNLQ 101 Query: 474 APCIIFIDEI 503 A I+FIDEI Sbjct: 102 AKDILFIDEI 111
>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2| Length = 424 Score = 44.7 bits (104), Expect = 3e-04 Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 21/193 (10%) Frame = +3 Query: 57 VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDI-------GGLE 215 ++P N+ + ++KD L + + D + ++ + P +++ I L+ Sbjct: 90 INPSNIH---VYKLHKDGPLSQNIGDDDGDESIIGSQLWQLPCVEFDSIWENLIYDSNLK 146 Query: 216 KEIQELVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQ--------- 368 E+ V A+ ++ K K+ I + +LL GPPGTGKT + + A Sbjct: 147 NEVMSYVAALAR-LSEKHVNTKI-INVNRLILLTGPPGTGKTSLCKGLAQHLSIRMNDKY 204 Query: 369 TNATFLKLAGPQLVQMFIGDGAKLVRDAF----ELAK-EKAPCIIFIDEIDAIGTKRFDS 533 + + L++ L + + KLV+ F ELA+ EK + IDE++++G R S Sbjct: 205 SKSVMLEINSHSLFSKWFSESGKLVQKMFDQIDELAEDEKCMVFVLIDEVESLGMCRESS 264 Query: 534 EVSGDRRSATNYV 572 + A V Sbjct: 265 SSRSEPSDAIRAV 277
>HSLU_BACSK (Q5WFQ1) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 463 Score = 44.7 bits (104), Expect = 3e-04 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Frame = +3 Query: 297 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM-FIG-DGAKLVRDAFE---- 458 PK +L+ GP G GKT +AR A A F+K+ + ++ ++G D +VRD E Sbjct: 51 PKNILMIGPTGVGKTEIARRLAKLVGAPFIKVEATKFTEVGYVGRDVESMVRDLVESSVR 110 Query: 459 LAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRRSATNY 569 L KE+ ++ DE + KR + + TNY Sbjct: 111 LVKEERVALV-KDEAKQLADKRLIELLVPSMKKETNY 146
>HSLU_BRAJA (Q89WN2) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 434 Score = 44.3 bits (103), Expect = 3e-04 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Frame = +3 Query: 297 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM-FIG-DGAKLVRDAFELA 464 PK +L+ GP G GKT +AR A NA FLK+ + ++ ++G D ++VRD E+A Sbjct: 50 PKNILMIGPTGVGKTEIARRLAKLANAPFLKVEATKFTEVGYVGRDVEQIVRDLVEVA 107
>CLPX_STAAW (Q8NW72) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 420 Score = 44.3 bits (103), Expect = 3e-04 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 14/128 (10%) Frame = +3 Query: 207 GLEKEIQELVEAIVLPMTHKEQFQKLGIRPP------KGVLLYGPPGTGKTLMARACAAQ 368 G EK + L A+ H ++ Q+LG + + L GP G+GKTL+A+ A Sbjct: 77 GQEKAKKSLAVAVY---NHYKRIQQLGPKEDDVELQKSNIALIGPTGSGKTLLAQTLAKT 133 Query: 369 TNATFLKLAGPQLVQM-FIGDGA-----KLVRDA-FELAK-EKAPCIIFIDEIDAIGTKR 524 N F L + ++GD +L++ A F++ K EK II++DEID I K Sbjct: 134 LNVPFAIADATSLTEAGYVGDDVENILLRLIQAADFDIDKAEKG--IIYVDEIDKIARKS 191 Query: 525 FDSEVSGD 548 ++ ++ D Sbjct: 192 ENTSITRD 199
>CLPX_STAAS (Q6G8Q1) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 420 Score = 44.3 bits (103), Expect = 3e-04 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 14/128 (10%) Frame = +3 Query: 207 GLEKEIQELVEAIVLPMTHKEQFQKLGIRPP------KGVLLYGPPGTGKTLMARACAAQ 368 G EK + L A+ H ++ Q+LG + + L GP G+GKTL+A+ A Sbjct: 77 GQEKAKKSLAVAVY---NHYKRIQQLGPKEDDVELQKSNIALIGPTGSGKTLLAQTLAKT 133 Query: 369 TNATFLKLAGPQLVQM-FIGDGA-----KLVRDA-FELAK-EKAPCIIFIDEIDAIGTKR 524 N F L + ++GD +L++ A F++ K EK II++DEID I K Sbjct: 134 LNVPFAIADATSLTEAGYVGDDVENILLRLIQAADFDIDKAEKG--IIYVDEIDKIARKS 191 Query: 525 FDSEVSGD 548 ++ ++ D Sbjct: 192 ENTSITRD 199
>CLPX_STAAR (Q6GG31) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 420 Score = 44.3 bits (103), Expect = 3e-04 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 14/128 (10%) Frame = +3 Query: 207 GLEKEIQELVEAIVLPMTHKEQFQKLGIRPP------KGVLLYGPPGTGKTLMARACAAQ 368 G EK + L A+ H ++ Q+LG + + L GP G+GKTL+A+ A Sbjct: 77 GQEKAKKSLAVAVY---NHYKRIQQLGPKEDDVELQKSNIALIGPTGSGKTLLAQTLAKT 133 Query: 369 TNATFLKLAGPQLVQM-FIGDGA-----KLVRDA-FELAK-EKAPCIIFIDEIDAIGTKR 524 N F L + ++GD +L++ A F++ K EK II++DEID I K Sbjct: 134 LNVPFAIADATSLTEAGYVGDDVENILLRLIQAADFDIDKAEKG--IIYVDEIDKIARKS 191 Query: 525 FDSEVSGD 548 ++ ++ D Sbjct: 192 ENTSITRD 199
>CLPX_STAAN (P63790) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 420 Score = 44.3 bits (103), Expect = 3e-04 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 14/128 (10%) Frame = +3 Query: 207 GLEKEIQELVEAIVLPMTHKEQFQKLGIRPP------KGVLLYGPPGTGKTLMARACAAQ 368 G EK + L A+ H ++ Q+LG + + L GP G+GKTL+A+ A Sbjct: 77 GQEKAKKSLAVAVY---NHYKRIQQLGPKEDDVELQKSNIALIGPTGSGKTLLAQTLAKT 133 Query: 369 TNATFLKLAGPQLVQM-FIGDGA-----KLVRDA-FELAK-EKAPCIIFIDEIDAIGTKR 524 N F L + ++GD +L++ A F++ K EK II++DEID I K Sbjct: 134 LNVPFAIADATSLTEAGYVGDDVENILLRLIQAADFDIDKAEKG--IIYVDEIDKIARKS 191 Query: 525 FDSEVSGD 548 ++ ++ D Sbjct: 192 ENTSITRD 199
>CLPX_STAAM (P63789) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 420 Score = 44.3 bits (103), Expect = 3e-04 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 14/128 (10%) Frame = +3 Query: 207 GLEKEIQELVEAIVLPMTHKEQFQKLGIRPP------KGVLLYGPPGTGKTLMARACAAQ 368 G EK + L A+ H ++ Q+LG + + L GP G+GKTL+A+ A Sbjct: 77 GQEKAKKSLAVAVY---NHYKRIQQLGPKEDDVELQKSNIALIGPTGSGKTLLAQTLAKT 133 Query: 369 TNATFLKLAGPQLVQM-FIGDGA-----KLVRDA-FELAK-EKAPCIIFIDEIDAIGTKR 524 N F L + ++GD +L++ A F++ K EK II++DEID I K Sbjct: 134 LNVPFAIADATSLTEAGYVGDDVENILLRLIQAADFDIDKAEKG--IIYVDEIDKIARKS 191 Query: 525 FDSEVSGD 548 ++ ++ D Sbjct: 192 ENTSITRD 199
>CLPX_STAAC (Q5HF98) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 420 Score = 44.3 bits (103), Expect = 3e-04 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 14/128 (10%) Frame = +3 Query: 207 GLEKEIQELVEAIVLPMTHKEQFQKLGIRPP------KGVLLYGPPGTGKTLMARACAAQ 368 G EK + L A+ H ++ Q+LG + + L GP G+GKTL+A+ A Sbjct: 77 GQEKAKKSLAVAVY---NHYKRIQQLGPKEDDVELQKSNIALIGPTGSGKTLLAQTLAKT 133 Query: 369 TNATFLKLAGPQLVQM-FIGDGA-----KLVRDA-FELAK-EKAPCIIFIDEIDAIGTKR 524 N F L + ++GD +L++ A F++ K EK II++DEID I K Sbjct: 134 LNVPFAIADATSLTEAGYVGDDVENILLRLIQAADFDIDKAEKG--IIYVDEIDKIARKS 191 Query: 525 FDSEVSGD 548 ++ ++ D Sbjct: 192 ENTSITRD 199
>CLPX_BORGA (Q660R1) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 430 Score = 43.9 bits (102), Expect = 4e-04 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Frame = +3 Query: 306 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM-FIGDGA-----KLVRDAFELAK 467 +LL GP G+GKTL+A+ AA+ N F L + ++G+ KL+ A Sbjct: 113 ILLVGPTGSGKTLLAKTLAAEMNVPFAIADATTLTEAGYVGEDVENILLKLIHAAHGDVS 172 Query: 468 EKAPCIIFIDEIDAIGTKRFDSEVSGD 548 II+IDEID I K + ++ D Sbjct: 173 LAEKGIIYIDEIDKIAKKNENVSITRD 199
>CLPX_BORBU (O51557) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 430 Score = 43.9 bits (102), Expect = 4e-04 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Frame = +3 Query: 306 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM-FIGDGA-----KLVRDAFELAK 467 +LL GP G+GKTL+A+ AA+ N F L + ++G+ KL+ A Sbjct: 113 ILLVGPTGSGKTLLAKTLAAEMNVPFAIADATTLTEAGYVGEDVENILLKLIHAAHGDVS 172 Query: 468 EKAPCIIFIDEIDAIGTKRFDSEVSGD 548 II+IDEID I K + ++ D Sbjct: 173 LAEKGIIYIDEIDKIAKKNENVSITRD 199
>YCAJ_ECOLI (P0AAZ4) Hypothetical protein ycaJ| Length = 447 Score = 43.9 bits (102), Expect = 4e-04 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 4/94 (4%) Frame = +3 Query: 306 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPC- 482 ++L+GPPGTGKT +A A NA +++ + G K +R+A E A++ Sbjct: 53 MILWGPPGTGKTTLAEVIARYANADVERISA-------VTSGVKEIREAIERARQNRNAG 105 Query: 483 ---IIFIDEIDAIGTKRFDSEVSGDRRSATNYVG 575 I+F+DE+ + D+ + ++G Sbjct: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIG 139
>YCAJ_ECOL6 (P0AAZ5) Hypothetical protein ycaJ| Length = 447 Score = 43.9 bits (102), Expect = 4e-04 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 4/94 (4%) Frame = +3 Query: 306 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPC- 482 ++L+GPPGTGKT +A A NA +++ + G K +R+A E A++ Sbjct: 53 MILWGPPGTGKTTLAEVIARYANADVERISA-------VTSGVKEIREAIERARQNRNAG 105 Query: 483 ---IIFIDEIDAIGTKRFDSEVSGDRRSATNYVG 575 I+F+DE+ + D+ + ++G Sbjct: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIG 139
>YCAJ_ECO57 (P0AAZ6) Hypothetical protein ycaJ| Length = 447 Score = 43.9 bits (102), Expect = 4e-04 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 4/94 (4%) Frame = +3 Query: 306 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEKAPC- 482 ++L+GPPGTGKT +A A NA +++ + G K +R+A E A++ Sbjct: 53 MILWGPPGTGKTTLAEVIARYANADVERISA-------VTSGVKEIREAIERARQNRNAG 105 Query: 483 ---IIFIDEIDAIGTKRFDSEVSGDRRSATNYVG 575 I+F+DE+ + D+ + ++G Sbjct: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIG 139
>CLPX_FRATT (Q5NH46) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 417 Score = 43.9 bits (102), Expect = 4e-04 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 7/88 (7%) Frame = +3 Query: 306 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM-FIGDG-----AKLVRDA-FELA 464 VLL GP G+GKTL A+ A N F L + ++GD +L+++A F++A Sbjct: 108 VLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVA 167 Query: 465 KEKAPCIIFIDEIDAIGTKRFDSEVSGD 548 K + II+IDEID I K + ++ D Sbjct: 168 KAQKG-IIYIDEIDKIARKSESTSITRD 194
>RUVB_EHRRW (Q5HAK4) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 331 Score = 43.5 bits (101), Expect = 6e-04 Identities = 28/70 (40%), Positives = 36/70 (51%) Frame = +3 Query: 294 PPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEK 473 P +LLYGPPG GKT +A A + F AGP L + GD A + L + Sbjct: 52 PIDHILLYGPPGLGKTTLAHIIAKELKVNFRSTAGPLLSK--AGDLAAI------LTNLQ 103 Query: 474 APCIIFIDEI 503 A ++FIDEI Sbjct: 104 ARDVLFIDEI 113
>RUVB_EHRRG (Q5FG39) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 331 Score = 43.5 bits (101), Expect = 6e-04 Identities = 28/70 (40%), Positives = 36/70 (51%) Frame = +3 Query: 294 PPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFELAKEK 473 P +LLYGPPG GKT +A A + F AGP L + GD A + L + Sbjct: 52 PIDHILLYGPPGLGKTTLAHIIAKELKVNFRSTAGPLLSK--AGDLAAI------LTNLQ 103 Query: 474 APCIIFIDEI 503 A ++FIDEI Sbjct: 104 ARDVLFIDEI 113 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,019,856 Number of Sequences: 219361 Number of extensions: 2000654 Number of successful extensions: 10484 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 9386 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10152 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
