| Clone Name | bags22g05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF475102.1| Triticum aestivum tat binding protein mRNA, partial cds Length = 564 Score = 771 bits (389), Expect = 0.0 Identities = 428/437 (97%), Gaps = 3/437 (0%) Strand = Plus / Plus Query: 229 aacttgttgaagctatagtgttgccaatgacacacaaggagcaatttcagaagttgggaa 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 aacttgttgaagctatagtgttgccaatgacacacaaggagcaatttcagaagttgggaa 67 Query: 289 tccgtcccccgaaaggagttcttctatatggaccacctgggacgggaaagacgttgatgg 348 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 68 tccgtcccccgaaaggagttctcttatatggaccacctgggacgggaaagacgttgatgg 127 Query: 349 ctcgtgcatgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctag 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 ctcgtgcatgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctag 187 Query: 409 ttcagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaagg 468 | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 188 tccagatgttcatcggtgacggggcaaagcttgtccgagatgcctttgagctggcaaagg 247 Query: 469 agaaggccccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttg 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 agaaggccccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttg 307 Query: 529 acagtgaagttagtggtgacaggagaagtgcaacgaactatgttggagttgctgaatcag 588 |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 308 acagtgaagtgagtggtgaca-gagaagtgcaacgaactatgttggagttgctgaatcag 366 Query: 589 ctagatggatttagcagtgatgagaggattaaaggtgatagctgcaacccaatcgtgcag 648 |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 367 ctagatggatttagcagtgatgagagga-taaaggtgatagctgcaa-ccaatcgtgcag 424 Query: 649 atattcttgatcctgct 665 ||||||| ||||||||| Sbjct: 425 atattctcgatcctgct 441
>dbj|AK103936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G01, full insert sequence Length = 1450 Score = 712 bits (359), Expect = 0.0 Identities = 590/663 (88%), Gaps = 3/663 (0%) Strand = Plus / Plus Query: 3 gttgttcttaagacatccacaagacagactatattccttcctgtgatcgggctagttgac 62 |||||| | ||||||||||||||||| || |||||||||||||| |||||||| |||||| Sbjct: 389 gttgttttgaagacatccacaagacaaacaatattccttcctgtaatcgggcttgttgac 448 Query: 63 cctgacaacctcaagcctggtgatttggttggagtcaacaaggacagctacttgatatta 122 ||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||| || Sbjct: 449 cctgaaaagctcaagcctggggatttggttggagtcaacaaagacagctacttgatacta 508 Query: 123 gacacgctaccttcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacct 182 ||||||||||||||||| ||||| || || || ||||||||||||||||||||||| ||| Sbjct: 509 gacacgctaccttcagaatatgattcacgggttaaggcaatggaggtagatgaaaagcct 568 Query: 183 acggaggattataatgacattggtggcctggagaaagagattcaggaacttgttgaagct 242 || |||||||| ||||||||||||||||| |||||| ||||||| || ||||||||||| Sbjct: 569 acagaggattacaatgacattggtggccttgagaaacagattcaagagcttgttgaagca 628 Query: 243 atagtgttgccaatgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaa 302 ||||| ||||| ||||| |||||||| | ||||||||||||||||| || ||||||||| Sbjct: 629 atagtattgcccatgactcacaaggaccggtttcagaagttgggaattcgccccccgaaa 688 Query: 303 ggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgcatgtgct 362 || |||||| | || ||||||||||| || |||||||| | |||||||||||||||||| Sbjct: 689 ggtgttcttttgtacggaccacctggcactggaaagaccctaatggctcgtgcatgtgct 748 Query: 363 gcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatgttcatc 422 || ||||| || || || |||||||||||||||||||| ||||| || |||||||||||| Sbjct: 749 gcccaaactaacgccacatttctgaaacttgctggtccacagcttgtccagatgttcatc 808 Query: 423 ggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggccccctgc 482 ||||| || |||||||| ||||| ||||||||| |||| ||||||||||| |||||||| Sbjct: 809 ggtgatggtgcaaagcttgtccgtgatgcctttcagcttgcaaaggagaaatccccctgc 868 Query: 483 atcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaagttagt 542 ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 869 atcatttttattgatgaaattgacgcaattggaacaaagcgttttgatagtgaagttagt 928 Query: 543 ggtgacaggagaagtgcaacgaactatgttggagttgctgaatcagctagatggatttag 602 ||||||| |||||||||| || || |||||||||||||||||||||||||||||||| || Sbjct: 929 ggtgaca-gagaagtgcagcgcacaatgttggagttgctgaatcagctagatggattcag 987 Query: 603 cagtgatgagaggattaaaggtgatagctgcaacccaatcgtgcagatattcttgatcct 662 ||||| ||||||| |||||||||||||||||| | ||||| || || |||||||||||| Sbjct: 988 tagtgacgagagga-taaaggtgatagctgcaa-ctaatcgcgcggacattcttgatcct 1045 Query: 663 gct 665 ||| Sbjct: 1046 gct 1048
>dbj|AK062185.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E03, full insert sequence Length = 1497 Score = 712 bits (359), Expect = 0.0 Identities = 590/663 (88%), Gaps = 3/663 (0%) Strand = Plus / Plus Query: 3 gttgttcttaagacatccacaagacagactatattccttcctgtgatcgggctagttgac 62 |||||| | ||||||||||||||||| || |||||||||||||| |||||||| |||||| Sbjct: 376 gttgttttgaagacatccacaagacaaacaatattccttcctgtaatcgggcttgttgac 435 Query: 63 cctgacaacctcaagcctggtgatttggttggagtcaacaaggacagctacttgatatta 122 ||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||| || Sbjct: 436 cctgaaaagctcaagcctggggatttggttggagtcaacaaagacagctacttgatacta 495 Query: 123 gacacgctaccttcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacct 182 ||||||||||||||||| ||||| || || || ||||||||||||||||||||||| ||| Sbjct: 496 gacacgctaccttcagaatatgattcacgggttaaggcaatggaggtagatgaaaagcct 555 Query: 183 acggaggattataatgacattggtggcctggagaaagagattcaggaacttgttgaagct 242 || |||||||| ||||||||||||||||| |||||| ||||||| || ||||||||||| Sbjct: 556 acagaggattacaatgacattggtggccttgagaaacagattcaagagcttgttgaagca 615 Query: 243 atagtgttgccaatgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaa 302 ||||| ||||| ||||| |||||||| | ||||||||||||||||| || ||||||||| Sbjct: 616 atagtattgcccatgactcacaaggaccggtttcagaagttgggaattcgccccccgaaa 675 Query: 303 ggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgcatgtgct 362 || |||||| | || ||||||||||| || |||||||| | |||||||||||||||||| Sbjct: 676 ggtgttcttttgtacggaccacctggcactggaaagaccctaatggctcgtgcatgtgct 735 Query: 363 gcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatgttcatc 422 || ||||| || || || |||||||||||||||||||| ||||| || |||||||||||| Sbjct: 736 gcccaaactaacgccacatttctgaaacttgctggtccacagcttgtccagatgttcatc 795 Query: 423 ggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggccccctgc 482 ||||| || |||||||| ||||| ||||||||| |||| ||||||||||| |||||||| Sbjct: 796 ggtgatggtgcaaagcttgtccgtgatgcctttcagcttgcaaaggagaaatccccctgc 855 Query: 483 atcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaagttagt 542 ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 856 atcatttttattgatgaaattgacgcaattggaacaaagcgttttgatagtgaagttagt 915 Query: 543 ggtgacaggagaagtgcaacgaactatgttggagttgctgaatcagctagatggatttag 602 ||||||| |||||||||| || || |||||||||||||||||||||||||||||||| || Sbjct: 916 ggtgaca-gagaagtgcagcgcacaatgttggagttgctgaatcagctagatggattcag 974 Query: 603 cagtgatgagaggattaaaggtgatagctgcaacccaatcgtgcagatattcttgatcct 662 ||||| ||||||| |||||||||||||||||| | ||||| || || |||||||||||| Sbjct: 975 tagtgacgagagga-taaaggtgatagctgcaa-ctaatcgcgcggacattcttgatcct 1032 Query: 663 gct 665 ||| Sbjct: 1033 gct 1035
>dbj|D17788.1|RICHTNP1 Oryza sativa (japonica cultivar-group) mRNA for homologue of Tat binding protein, complete cds Length = 1473 Score = 712 bits (359), Expect = 0.0 Identities = 590/663 (88%), Gaps = 3/663 (0%) Strand = Plus / Plus Query: 3 gttgttcttaagacatccacaagacagactatattccttcctgtgatcgggctagttgac 62 |||||| | ||||||||||||||||| || |||||||||||||| |||||||| |||||| Sbjct: 359 gttgttttgaagacatccacaagacaaacaatattccttcctgtaatcgggcttgttgac 418 Query: 63 cctgacaacctcaagcctggtgatttggttggagtcaacaaggacagctacttgatatta 122 ||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||| || Sbjct: 419 cctgaaaagctcaagcctggggatttggttggagtcaacaaagacagctacttgatacta 478 Query: 123 gacacgctaccttcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacct 182 ||||||||||||||||| ||||| || || || ||||||||||||||||||||||| ||| Sbjct: 479 gacacgctaccttcagaatatgattcacgggttaaggcaatggaggtagatgaaaagcct 538 Query: 183 acggaggattataatgacattggtggcctggagaaagagattcaggaacttgttgaagct 242 || |||||||| ||||||||||||||||| |||||| ||||||| || ||||||||||| Sbjct: 539 acagaggattacaatgacattggtggccttgagaaacagattcaagagcttgttgaagca 598 Query: 243 atagtgttgccaatgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaa 302 ||||| ||||| ||||| |||||||| | ||||||||||||||||| || ||||||||| Sbjct: 599 atagtattgcccatgactcacaaggaccggtttcagaagttgggaattcgccccccgaaa 658 Query: 303 ggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgcatgtgct 362 || |||||| | || ||||||||||| || |||||||| | |||||||||||||||||| Sbjct: 659 ggtgttcttttgtacggaccacctggcactggaaagaccctaatggctcgtgcatgtgct 718 Query: 363 gcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatgttcatc 422 || ||||| || || || |||||||||||||||||||| ||||| || |||||||||||| Sbjct: 719 gcccaaactaacgccacatttctgaaacttgctggtccacagcttgtccagatgttcatc 778 Query: 423 ggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggccccctgc 482 ||||| || |||||||| ||||| ||||||||| |||| ||||||||||| |||||||| Sbjct: 779 ggtgatggtgcaaagcttgtccgtgatgcctttcagcttgcaaaggagaaatccccctgc 838 Query: 483 atcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaagttagt 542 ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 839 atcatttttattgatgaaattgacgcaattggaacaaagcgttttgatagtgaagttagt 898 Query: 543 ggtgacaggagaagtgcaacgaactatgttggagttgctgaatcagctagatggatttag 602 ||||||| |||||||||| || || |||||||||||||||||||||||||||||||| || Sbjct: 899 ggtgaca-gagaagtgcagcgcacaatgttggagttgctgaatcagctagatggattcag 957 Query: 603 cagtgatgagaggattaaaggtgatagctgcaacccaatcgtgcagatattcttgatcct 662 ||||| ||||||| |||||||||||||||||| | ||||| || || |||||||||||| Sbjct: 958 tagtgacgagagga-taaaggtgatagctgcaa-ctaatcgcgcggacattcttgatcct 1015 Query: 663 gct 665 ||| Sbjct: 1016 gct 1018
>dbj|AB037155.1| Oryza sativa (japonica cultivar-group) OsRPT5a mRNA for 26S proteasome regulatory particle triple-A ATPase subunit5a, complete cds Length = 1510 Score = 712 bits (359), Expect = 0.0 Identities = 590/663 (88%), Gaps = 3/663 (0%) Strand = Plus / Plus Query: 3 gttgttcttaagacatccacaagacagactatattccttcctgtgatcgggctagttgac 62 |||||| | ||||||||||||||||| || |||||||||||||| |||||||| |||||| Sbjct: 360 gttgttttgaagacatccacaagacaaacaatattccttcctgtaatcgggcttgttgac 419 Query: 63 cctgacaacctcaagcctggtgatttggttggagtcaacaaggacagctacttgatatta 122 ||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||| || Sbjct: 420 cctgaaaagctcaagcctggggatttggttggagtcaacaaagacagctacttgatacta 479 Query: 123 gacacgctaccttcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacct 182 ||||||||||||||||| ||||| || || || ||||||||||||||||||||||| ||| Sbjct: 480 gacacgctaccttcagaatatgattcacgggttaaggcaatggaggtagatgaaaagcct 539 Query: 183 acggaggattataatgacattggtggcctggagaaagagattcaggaacttgttgaagct 242 || |||||||| ||||||||||||||||| |||||| ||||||| || ||||||||||| Sbjct: 540 acagaggattacaatgacattggtggccttgagaaacagattcaagagcttgttgaagca 599 Query: 243 atagtgttgccaatgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaa 302 ||||| ||||| ||||| |||||||| | ||||||||||||||||| || ||||||||| Sbjct: 600 atagtattgcccatgactcacaaggaccggtttcagaagttgggaattcgccccccgaaa 659 Query: 303 ggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgcatgtgct 362 || |||||| | || ||||||||||| || |||||||| | |||||||||||||||||| Sbjct: 660 ggtgttcttttgtacggaccacctggcactggaaagaccctaatggctcgtgcatgtgct 719 Query: 363 gcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatgttcatc 422 || ||||| || || || |||||||||||||||||||| ||||| || |||||||||||| Sbjct: 720 gcccaaactaacgccacatttctgaaacttgctggtccacagcttgtccagatgttcatc 779 Query: 423 ggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggccccctgc 482 ||||| || |||||||| ||||| ||||||||| |||| ||||||||||| |||||||| Sbjct: 780 ggtgatggtgcaaagcttgtccgtgatgcctttcagcttgcaaaggagaaatccccctgc 839 Query: 483 atcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaagttagt 542 ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 840 atcatttttattgatgaaattgacgcaattggaacaaagcgttttgatagtgaagttagt 899 Query: 543 ggtgacaggagaagtgcaacgaactatgttggagttgctgaatcagctagatggatttag 602 ||||||| |||||||||| || || |||||||||||||||||||||||||||||||| || Sbjct: 900 ggtgaca-gagaagtgcagcgcacaatgttggagttgctgaatcagctagatggattcag 958 Query: 603 cagtgatgagaggattaaaggtgatagctgcaacccaatcgtgcagatattcttgatcct 662 ||||| ||||||| |||||||||||||||||| | ||||| || || |||||||||||| Sbjct: 959 tagtgacgagagga-taaaggtgatagctgcaa-ctaatcgcgcggacattcttgatcct 1016 Query: 663 gct 665 ||| Sbjct: 1017 gct 1019
>dbj|AK101474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040L18, full insert sequence Length = 1520 Score = 704 bits (355), Expect = 0.0 Identities = 589/663 (88%), Gaps = 3/663 (0%) Strand = Plus / Plus Query: 3 gttgttcttaagacatccacaagacagactatattccttcctgtgatcgggctagttgac 62 |||||| | ||||||||||||||||| || |||||||||||||| |||||||| |||||| Sbjct: 403 gttgttttgaagacatccacaagacaaacaatattccttcctgtaatcgggcttgttgac 462 Query: 63 cctgacaacctcaagcctggtgatttggttggagtcaacaaggacagctacttgatatta 122 ||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||| || Sbjct: 463 cctgaaaagctcaagcctggggatttggttggagtcaacaaagacagctacttgatacta 522 Query: 123 gacacgctaccttcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacct 182 ||||||||||||||||| ||||| || || || ||||||||||||||||||||||| ||| Sbjct: 523 gacacgctaccttcagaatatgattcacgggttaaggcaatggaggtagatgaaaagcct 582 Query: 183 acggaggattataatgacattggtggcctggagaaagagattcaggaacttgttgaagct 242 || |||||||| ||||||||||||||||| |||||| ||||||| || ||||||||||| Sbjct: 583 acagaggattacaatgacattggtggccttgagaaacagattcaagagcttgttgaagca 642 Query: 243 atagtgttgccaatgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaa 302 ||||| ||||| ||||| |||||||| | ||||||||||||||||| || ||||||||| Sbjct: 643 atagtattgcccatgactcacaaggaccggtttcagaagttgggaattcgccccccgaaa 702 Query: 303 ggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgcatgtgct 362 || |||||| | || ||||||||||| || |||||||| | |||||||||||||||||| Sbjct: 703 ggtgttcttttgtacggaccacctggcactggaaagaccctaatggctcgtgcatgtgct 762 Query: 363 gcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatgttcatc 422 || ||||| || || || |||||||||||||||||||| ||||| || |||||||||||| Sbjct: 763 gcccaaactaacgccacatttctgaaacttgctggtccacagcttgtccagatgttcatc 822 Query: 423 ggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggccccctgc 482 ||||| || |||||||| ||||| ||||||||| |||| ||||||||||| |||||||| Sbjct: 823 ggtgatggtgcaaagcttgtccgtgatgcctttcagcttgcaaaggagaaatccccctgc 882 Query: 483 atcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaagttagt 542 ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 883 atcatttttattgatgaaattgacgcaattggaacaaagcgttttgatagtgaagttagt 942 Query: 543 ggtgacaggagaagtgcaacgaactatgttggagttgctgaatcagctagatggatttag 602 ||||||| |||||||||| || || |||||||||||||||||||||||||||||||| || Sbjct: 943 ggtgaca-gagaagtgcagcgcacaatgttggagttgctgaatcagctagatggattcag 1001 Query: 603 cagtgatgagaggattaaaggtgatagctgcaacccaatcgtgcagatattcttgatcct 662 ||||| ||||||| |||||||||||||||||| | | ||| || || |||||||||||| Sbjct: 1002 tagtgacgagagga-taaaggtgatagctgcaa-ctagtcgcgcggacattcttgatcct 1059 Query: 663 gct 665 ||| Sbjct: 1060 gct 1062
>dbj|AK067051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093O11, full insert sequence Length = 1397 Score = 624 bits (315), Expect = e-176 Identities = 522/587 (88%), Gaps = 3/587 (0%) Strand = Plus / Plus Query: 79 ctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctaccttcag 138 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 352 ctggggatttggttggagtcaacaaagacagctacttgatactagacacgctaccttcag 411 Query: 139 agtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataatg 198 | ||||| || || || ||||||||||||||||||||||| ||||| |||||||| |||| Sbjct: 412 aatatgattcacgggttaaggcaatggaggtagatgaaaagcctacagaggattacaatg 471 Query: 199 acattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaatga 258 ||||||||||||| |||||| ||||||| || ||||||||||| ||||| ||||| |||| Sbjct: 472 acattggtggccttgagaaacagattcaagagcttgttgaagcaatagtattgcccatga 531 Query: 259 cacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctatatg 318 | |||||||| | ||||||||||||||||| || ||||||||||| |||||| | || | Sbjct: 532 ctcacaaggaccggtttcagaagttgggaattcgccccccgaaaggtgttcttttgtacg 591 Query: 319 gaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgcaa 378 |||||||||| || |||||||| | |||||||||||||||||||| ||||| || || | Sbjct: 592 gaccacctggcactggaaagaccctaatggctcgtgcatgtgctgcccaaactaacgcca 651 Query: 379 cctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaagc 438 | |||||||||||||||||||| ||||| || ||||||||||||||||| || ||||||| Sbjct: 652 catttctgaaacttgctggtccacagcttgtccagatgttcatcggtgatggtgcaaagc 711 Query: 439 tcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgatg 498 | ||||| ||||||||| |||| ||||||||||| |||||||||||||||||||||||| Sbjct: 712 ttgtccgtgatgcctttcagcttgcaaaggagaaatccccctgcatcatttttattgatg 771 Query: 499 agattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggagaagtg 558 | ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 772 aaattgacgcaattggaacaaagcgttttgatagtgaagttagtggtgaca-gagaagtg 830 Query: 559 caacgaactatgttggagttgctgaatcagctagatggatttagcagtgatgagaggatt 618 || || || |||||||||||||||||||||||||||||||| || ||||| ||||||| | Sbjct: 831 cagcgcacaatgttggagttgctgaatcagctagatggattcagtagtgacgagagga-t 889 Query: 619 aaaggtgatagctgcaacccaatcgtgcagatattcttgatcctgct 665 ||||||||||||||||| | ||||| || || ||||||||||||||| Sbjct: 890 aaaggtgatagctgcaa-ctaatcgcgcggacattcttgatcctgct 935
>gb|AY105910.1| Zea mays PCO106969 mRNA sequence Length = 1671 Score = 573 bits (289), Expect = e-160 Identities = 574/665 (86%), Gaps = 3/665 (0%) Strand = Plus / Plus Query: 1 gtgttgttcttaagacatccacaagacagactatattccttcctgtgatcgggctagttg 60 |||||||||| ||||||||||| ||||| || |||||||||||||| || ||| |||||| Sbjct: 443 gtgttgttctgaagacatccaccagacaaaccatattccttcctgtaattgggttagttg 502 Query: 61 accctgacaacctcaagcctggtgatttggttggagtcaacaaggacagctacttgatat 120 |||| || || || |||||||| ||||| |||||||| ||||| ||||||||||||||| Sbjct: 503 accccgataagctaaagcctggcgatttagttggagttaacaaagacagctacttgatac 562 Query: 121 tagacacgctaccttcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaac 180 |||| || | ||||||||||||||||| || || ||||||||||| |||||||| |||| Sbjct: 563 tagatacattgccttcagagtatgactcacgggttaaggcaatggaagtagatgagaaac 622 Query: 181 ctacggaggattataatgacattggtggcctggagaaagagattcaggaacttgttgaag 240 |||| |||||||| ||||||||||| || || |||||| ||||||| || ||||| |||| Sbjct: 623 ctactgaggattacaatgacattggcggacttgagaaacagattcaagagcttgtggaag 682 Query: 241 ctatagtgttgccaatgacacacaaggagcaatttcagaagttgggaatccgtcccccga 300 | |||||||| ||||||||||||||||| | |||||| || ||||| || |||||||| | Sbjct: 683 caatagtgttaccaatgacacacaaggaccgatttcaaaaattgggcattcgtcccccca 742 Query: 301 aaggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgcatgtg 360 |||| |||||| | |||||||| |||||||| || || ||| | |||||||||||||| | Sbjct: 743 aaggggttcttttgtatggaccccctgggactgggaaaacgctcatggctcgtgcatgcg 802 Query: 361 ctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatgttca 420 ||||||| || |||||||| ||||||||| | |||||||| || || || |||||||||| Sbjct: 803 ctgcacagacaaatgcaacatttctgaaattggctggtccacaacttgtccagatgttca 862 Query: 421 tcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggccccct 480 | ||||| || || ||||| || ||||||| ||| |||| || |||||||| ||||| | Sbjct: 863 ttggtgatggagctaagcttgttagagatgcttttcagcttgctaaggagaaagccccgt 922 Query: 481 gcatcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaagtta 540 ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 923 gcatcatctttattgatgaaattgatgccattggaacaaagcgttttgacagtgaagtta 982 Query: 541 gtggtgacaggagaagtgcaacgaactatgttggagttgctgaatcagctagatggattt 600 ||||||| | ||||||||||| | || |||||||| |||||||| ||||| ||||||||| Sbjct: 983 gtggtgata-gagaagtgcaaaggacaatgttggaattgctgaaccagcttgatggattt 1041 Query: 601 agcagtgatgagaggattaaaggtgatagctgcaacccaatcgtgcagatattcttgatc 660 ||||| |||||||||| |||||||||||||||||| | |||||||| ||||||||||||| Sbjct: 1042 agcagcgatgagagga-taaaggtgatagctgcaa-caaatcgtgctgatattcttgatc 1099 Query: 661 ctgct 665 ||||| Sbjct: 1100 ctgct 1104
>gb|BT016782.1| Zea mays clone Contig615 mRNA sequence Length = 1660 Score = 565 bits (285), Expect = e-158 Identities = 573/665 (86%), Gaps = 3/665 (0%) Strand = Plus / Plus Query: 1 gtgttgttcttaagacatccacaagacagactatattccttcctgtgatcgggctagttg 60 |||||||||| ||||||||||| ||||| || |||||||||||||| || ||| |||||| Sbjct: 485 gtgttgttctgaagacatccaccagacaaaccatattccttcctgtaattgggttagttg 544 Query: 61 accctgacaacctcaagcctggtgatttggttggagtcaacaaggacagctacttgatat 120 |||| || || || |||||||| ||||| |||||||| ||||| ||||||||||||||| Sbjct: 545 accccgataagctaaagcctggcgatttagttggagttaacaaagacagctacttgatac 604 Query: 121 tagacacgctaccttcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaac 180 |||| || | ||||||||||||||||| || || ||||||||||| |||||||| |||| Sbjct: 605 tagatacattgccttcagagtatgactcacgggttaaggcaatggaagtagatgagaaac 664 Query: 181 ctacggaggattataatgacattggtggcctggagaaagagattcaggaacttgttgaag 240 |||| |||||||| ||||||||||| || || |||||| ||||||| || ||||| |||| Sbjct: 665 ctactgaggattacaatgacattggcggacttgagaaacagattcaagagcttgtggaag 724 Query: 241 ctatagtgttgccaatgacacacaaggagcaatttcagaagttgggaatccgtcccccga 300 | |||||||| ||||||||||||||||| | |||||| || ||||| || |||||||| | Sbjct: 725 caatagtgttaccaatgacacacaaggaccgatttcaaaaattgggcattcgtcccccca 784 Query: 301 aaggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgcatgtg 360 |||| |||||| | |||||||| |||||||| || || || | |||||||||||||| | Sbjct: 785 aaggggttcttttgtatggaccccctgggaccgggaaaacactcatggctcgtgcatgcg 844 Query: 361 ctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatgttca 420 ||||||| || |||||||| ||||||||| | |||||||| || || || |||||||||| Sbjct: 845 ctgcacagactaatgcaacatttctgaaattggctggtccacaacttgtccagatgttca 904 Query: 421 tcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggccccct 480 | ||||| || || ||||| || ||||||| ||| |||| || |||||||| ||||| | Sbjct: 905 ttggtgatggagctaagcttgttagagatgcttttcagcttgctaaggagaaagccccgt 964 Query: 481 gcatcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaagtta 540 ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 965 gcatcatctttattgatgaaattgatgccattggaacaaagcgttttgacagtgaagtta 1024 Query: 541 gtggtgacaggagaagtgcaacgaactatgttggagttgctgaatcagctagatggattt 600 |||| || | ||||||||||| | || |||||||| |||||||||||||| ||||||||| Sbjct: 1025 gtggcgata-gagaagtgcaaaggacaatgttggaattgctgaatcagcttgatggattt 1083 Query: 601 agcagtgatgagaggattaaaggtgatagctgcaacccaatcgtgcagatattcttgatc 660 ||||| |||||||||| |||||||||||||||||| | |||||||| ||||||||||||| Sbjct: 1084 agcagcgatgagagga-taaaggtgatagctgcaa-caaatcgtgctgatattcttgatc 1141 Query: 661 ctgct 665 ||||| Sbjct: 1142 ctgct 1146
>dbj|AK065612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026E01, full insert sequence Length = 1571 Score = 486 bits (245), Expect = e-134 Identities = 563/665 (84%), Gaps = 3/665 (0%) Strand = Plus / Plus Query: 1 gtgttgttcttaagacatccacaagacagactatattccttcctgtgatcgggctagttg 60 |||||||||| ||||| ||||||||||| |||||||||||||||||| | |||||||||| Sbjct: 421 gtgttgttctgaagacttccacaagacaaactatattccttcctgtggttgggctagttg 480 Query: 61 accctgacaacctcaagcctggtgatttggttggagtcaacaaggacagctacttgatat 120 ||||||| || |||||||||||||||||||||||||| ||||| ||||||||| | ||| Sbjct: 481 accctgataaactcaagcctggtgatttggttggagtaaacaaagacagctaccttatac 540 Query: 121 tagacacgctaccttcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaac 180 | ||||| || || ||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 541 tggacacactgccatcagagtatgattcacgagtaaaggcaatggaggtggatgaaaaac 600 Query: 181 ctacggaggattataatgacattggtggcctggagaaagagattcaggaacttgttgaag 240 | || ||||| || ||||| ||||| || || || || ||||||| || ||||| || | Sbjct: 601 ccacagaggactacaatgatattggaggtcttgaaaagcagattcaagagcttgtggagg 660 Query: 241 ctatagtgttgccaatgacacacaaggagcaatttcagaagttgggaatccgtcccccga 300 | || || ||||||||||||||||| || | || || |||||||| || || ||||| | Sbjct: 661 caattgttttgccaatgacacacaaagatcggttccaaaagttgggcattcgccccccca 720 Query: 301 aaggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgcatgtg 360 ||||||||||| | |||||||||||||| || || ||||| ||||||||||||||||||| Sbjct: 721 aaggagttcttttgtatggaccacctggaactgggaagacattgatggctcgtgcatgtg 780 Query: 361 ctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatgttca 420 ||||||| || ||||| || || |||||| | |||||||| || |||| |||||||| | Sbjct: 781 ctgcacagacaaatgcgacgttcctgaaattagctggtccacaattagtccagatgttta 840 Query: 421 tcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggccccct 480 ||||||| || |||||||| || || ||||| ||| |||| || |||||||| || |||| Sbjct: 841 tcggtgatggagcaaagctggttcgggatgcttttcagcttgctaaggagaaagctccct 900 Query: 481 gcatcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaagtta 540 |||||||||| ||||||||||||||||| ||||| || ||| | ||||||||||| |||| Sbjct: 901 gcatcattttcattgatgagattgatgccattgggactaagaggtttgacagtgaggtta 960 Query: 541 gtggtgacaggagaagtgcaacgaactatgttggagttgctgaatcagctagatggattt 600 ||||||||| ||||||| || | ||||||||||| |||||||| || || ||||||||| Sbjct: 961 gtggtgaca-gagaagttcagaggactatgttggaattgctgaaccaactcgatggattt 1019 Query: 601 agcagtgatgagaggattaaaggtgatagctgcaacccaatcgtgcagatattcttgatc 660 || ||||| ||| ||| ||||||| ||||| |||| | |||||||| || |||||||||| Sbjct: 1020 agtagtgacgagcgga-taaaggtcatagcggcaa-cgaatcgtgctgacattcttgatc 1077 Query: 661 ctgct 665 ||||| Sbjct: 1078 ctgct 1082
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 246 bits (124), Expect = 8e-62 Identities = 175/192 (91%) Strand = Plus / Minus Query: 27 cagactatattccttcctgtgatcgggctagttgaccctgacaacctcaagcctggtgat 86 ||||| |||||||||||||| |||||||| ||||||||||| || ||||||||||| ||| Sbjct: 34286996 cagacaatattccttcctgtaatcgggcttgttgaccctgaaaagctcaagcctggggat 34286937 Query: 87 ttggttggagtcaacaaggacagctacttgatattagacacgctaccttcagagtatgac 146 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 34286936 ttggttggagtcaacaaagacagctacttgatactagacacgctaccttcagaatatgat 34286877 Query: 147 tctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataatgacattggt 206 || || || ||||||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 34286876 tcacgggttaaggcaatggaggtagatgaaaagcctacagaggattacaatgacattggt 34286817 Query: 207 ggcctggagaaa 218 ||||| |||||| Sbjct: 34286816 ggccttgagaaa 34286805 Score = 165 bits (83), Expect = 2e-37 Identities = 161/187 (86%) Strand = Plus / Minus Query: 220 agattcaggaacttgttgaagctatagtgttgccaatgacacacaaggagcaatttcaga 279 ||||||| || ||||||||||| ||||| ||||| ||||| |||||||| | ||||||| Sbjct: 34286630 agattcaagagcttgttgaagcaatagtattgcccatgactcacaaggaccggtttcaga 34286571 Query: 280 agttgggaatccgtcccccgaaaggagttcttctatatggaccacctgggacgggaaaga 339 |||||||||| || ||||||||||| |||||| | || ||||||||||| || ||||||| Sbjct: 34286570 agttgggaattcgccccccgaaaggtgttcttttgtacggaccacctggcactggaaaga 34286511 Query: 340 cgttgatggctcgtgcatgtgctgcacaaaccaatgcaacctttctgaaacttgctggtc 399 | | |||||||||||||||||||| ||||| || || || ||||||||||||||||||| Sbjct: 34286510 ccctaatggctcgtgcatgtgctgcccaaactaacgccacatttctgaaacttgctggtc 34286451 Query: 400 cgcagct 406 | ||||| Sbjct: 34286450 cacagct 34286444 Score = 157 bits (79), Expect = 6e-35 Identities = 109/119 (91%) Strand = Plus / Minus Query: 411 cagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggag 470 ||||||||||||||||| || |||||||| ||||| ||||||||| |||| ||||||||| Sbjct: 34286083 cagatgttcatcggtgatggtgcaaagcttgtccgtgatgcctttcagcttgcaaaggag 34286024 Query: 471 aaggccccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttga 529 || ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 34286023 aaatccccctgcatcatttttattgatgaaattgacgcaattggaacaaagcgttttga 34285965 Score = 113 bits (57), Expect = 8e-22 Identities = 82/89 (92%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 529 acagtgaagttagtggtgacaggagaagtgcaacgaactatgttggagttgctgaatcag 588 |||||||||||||||||||||| ||||||||| || || ||||||||||||||||||||| Sbjct: 34285878 acagtgaagttagtggtgacag-agaagtgcagcgcacaatgttggagttgctgaatcag 34285820 Query: 589 ctagatggatttagcagtgatgagaggat 617 ||||||||||| || ||||| |||||||| Sbjct: 34285819 ctagatggattcagtagtgacgagaggat 34285791 Score = 42.1 bits (21), Expect = 2.3 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 621 aggtgatagctgcaacccaatcgtgcagatattcttgatcctgct 665 ||||||||||||||| | ||||| || || ||||||||||||||| Sbjct: 34285545 aggtgatagctgcaa-ctaatcgcgcggacattcttgatcctgct 34285502
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 246 bits (124), Expect = 8e-62 Identities = 175/192 (91%) Strand = Plus / Minus Query: 27 cagactatattccttcctgtgatcgggctagttgaccctgacaacctcaagcctggtgat 86 ||||| |||||||||||||| |||||||| ||||||||||| || ||||||||||| ||| Sbjct: 122269 cagacaatattccttcctgtaatcgggcttgttgaccctgaaaagctcaagcctggggat 122210 Query: 87 ttggttggagtcaacaaggacagctacttgatattagacacgctaccttcagagtatgac 146 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 122209 ttggttggagtcaacaaagacagctacttgatactagacacgctaccttcagaatatgat 122150 Query: 147 tctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataatgacattggt 206 || || || ||||||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 122149 tcacgggttaaggcaatggaggtagatgaaaagcctacagaggattacaatgacattggt 122090 Query: 207 ggcctggagaaa 218 ||||| |||||| Sbjct: 122089 ggccttgagaaa 122078 Score = 165 bits (83), Expect = 2e-37 Identities = 161/187 (86%) Strand = Plus / Minus Query: 220 agattcaggaacttgttgaagctatagtgttgccaatgacacacaaggagcaatttcaga 279 ||||||| || ||||||||||| ||||| ||||| ||||| |||||||| | ||||||| Sbjct: 121903 agattcaagagcttgttgaagcaatagtattgcccatgactcacaaggaccggtttcaga 121844 Query: 280 agttgggaatccgtcccccgaaaggagttcttctatatggaccacctgggacgggaaaga 339 |||||||||| || ||||||||||| |||||| | || ||||||||||| || ||||||| Sbjct: 121843 agttgggaattcgccccccgaaaggtgttcttttgtacggaccacctggcactggaaaga 121784 Query: 340 cgttgatggctcgtgcatgtgctgcacaaaccaatgcaacctttctgaaacttgctggtc 399 | | |||||||||||||||||||| ||||| || || || ||||||||||||||||||| Sbjct: 121783 ccctaatggctcgtgcatgtgctgcccaaactaacgccacatttctgaaacttgctggtc 121724 Query: 400 cgcagct 406 | ||||| Sbjct: 121723 cacagct 121717 Score = 157 bits (79), Expect = 6e-35 Identities = 109/119 (91%) Strand = Plus / Minus Query: 411 cagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggag 470 ||||||||||||||||| || |||||||| ||||| ||||||||| |||| ||||||||| Sbjct: 121356 cagatgttcatcggtgatggtgcaaagcttgtccgtgatgcctttcagcttgcaaaggag 121297 Query: 471 aaggccccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttga 529 || ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 121296 aaatccccctgcatcatttttattgatgaaattgacgcaattggaacaaagcgttttga 121238 Score = 113 bits (57), Expect = 8e-22 Identities = 82/89 (92%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 529 acagtgaagttagtggtgacaggagaagtgcaacgaactatgttggagttgctgaatcag 588 |||||||||||||||||||||| ||||||||| || || ||||||||||||||||||||| Sbjct: 121151 acagtgaagttagtggtgacag-agaagtgcagcgcacaatgttggagttgctgaatcag 121093 Query: 589 ctagatggatttagcagtgatgagaggat 617 ||||||||||| || ||||| |||||||| Sbjct: 121092 ctagatggattcagtagtgacgagaggat 121064 Score = 42.1 bits (21), Expect = 2.3 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 621 aggtgatagctgcaacccaatcgtgcagatattcttgatcctgct 665 ||||||||||||||| | ||||| || || ||||||||||||||| Sbjct: 120818 aggtgatagctgcaa-ctaatcgcgcggacattcttgatcctgct 120775
>ref|NM_100781.3| Arabidopsis thaliana ATPase/ calmodulin binding AT1G09100 mRNA, complete cds Length = 1474 Score = 192 bits (97), Expect = 1e-45 Identities = 428/537 (79%), Gaps = 1/537 (0%) Strand = Plus / Plus Query: 75 aagcctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctacct 134 |||||||| || || |||||||| ||||| || || |||||||| | || || ||||| Sbjct: 444 aagcctggggacttagttggagttaacaaagatagttacttgattctggatactttacct 503 Query: 135 tcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattat 194 || |||||||| || ||||||| ||||||||||| || ||||||||||| || || || Sbjct: 504 tctgagtatgattcaagagtaaaagcaatggaggtcgacgaaaaacctactgaagactac 563 Query: 195 aatgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgcca 254 ||||| || || || || || ||| |||| || |||||||||||||| || ||||||||| Sbjct: 564 aatgatatagggggactagaaaaacagatacaagaacttgttgaagccattgtgttgcca 623 Query: 255 atgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttcta 314 ||||| || || ||||| || | |||||||| |||||||| || ||||| || || | Sbjct: 624 atgactcataaagagcagttcgaaaagttgggtatccgtccaccaaaaggtgtactcttg 683 Query: 315 tatggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaat 374 ||||| || ||||| || ||||||||||||||||| || || ||||| ||||| || ||| Sbjct: 684 tatggtcctcctggaaccggaaagacgttgatggcccgagcttgtgcagcacagacaaat 743 Query: 375 gcaacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggca 434 ||||| || || ||||| || || || || || ||||||||||||||||| || || ||| Sbjct: 744 gcaactttcctcaaactagcagggccacaacttgttcagatgttcatcggagatggagca 803 Query: 435 aagctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttatt 494 || || ||||| ||||| || ||| ||||| ||||| |||| || || || || || Sbjct: 804 aaacttgtccgtgatgctttcctgcttgcaaaagagaaatccccttgtattatattcata 863 Query: 495 gatgagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggaga 554 ||||||||||| ||||| || |||||||||||||| || ||||||||||| ||| | || Sbjct: 864 gatgagattgacgcaatagggacaaagcgttttgatagcgaagttagtggagac-cgtga 922 Query: 555 agtgcaacgaactatgttggagttgctgaatcagctagatggatttagcagtgatga 611 || ||| | || ||||||||| |||| || ||||| |||||||| ||||| ||||| Sbjct: 923 ggtacaaaggacaatgttggagctgctcaaccagcttgatggattcagcagcgatga 979
>gb|AY124813.1| Arabidopsis thaliana At1g09100/F7G19_2 mRNA, complete cds Length = 1272 Score = 192 bits (97), Expect = 1e-45 Identities = 428/537 (79%), Gaps = 1/537 (0%) Strand = Plus / Plus Query: 75 aagcctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctacct 134 |||||||| || || |||||||| ||||| || || |||||||| | || || ||||| Sbjct: 388 aagcctggggacttagttggagttaacaaagatagttacttgattctggatactttacct 447 Query: 135 tcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattat 194 || |||||||| || ||||||| ||||||||||| || ||||||||||| || || || Sbjct: 448 tctgagtatgattcaagagtaaaagcaatggaggtcgacgaaaaacctactgaagactac 507 Query: 195 aatgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgcca 254 ||||| || || || || || ||| |||| || |||||||||||||| || ||||||||| Sbjct: 508 aatgatatagggggactagaaaaacagatacaagaacttgttgaagccattgtgttgcca 567 Query: 255 atgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttcta 314 ||||| || || ||||| || | |||||||| |||||||| || ||||| || || | Sbjct: 568 atgactcataaagagcagttcgaaaagttgggtatccgtccaccaaaaggtgtactcttg 627 Query: 315 tatggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaat 374 ||||| || ||||| || ||||||||||||||||| || || ||||| ||||| || ||| Sbjct: 628 tatggtcctcctggaaccggaaagacgttgatggcccgagcttgtgcagcacagacaaat 687 Query: 375 gcaacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggca 434 ||||| || || ||||| || || || || || ||||||||||||||||| || || ||| Sbjct: 688 gcaactttcctcaaactagcagggccacaacttgttcagatgttcatcggagatggagca 747 Query: 435 aagctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttatt 494 || || ||||| ||||| || ||| ||||| ||||| |||| || || || || || Sbjct: 748 aaacttgtccgtgatgctttcctgcttgcaaaagagaaatccccttgtattatattcata 807 Query: 495 gatgagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggaga 554 ||||||||||| ||||| || |||||||||||||| || ||||||||||| ||| | || Sbjct: 808 gatgagattgacgcaatagggacaaagcgttttgatagcgaagttagtggagac-cgtga 866 Query: 555 agtgcaacgaactatgttggagttgctgaatcagctagatggatttagcagtgatga 611 || ||| | || ||||||||| |||| || ||||| |||||||| ||||| ||||| Sbjct: 867 ggtacaaaggacaatgttggagctgctcaaccagcttgatggattcagcagcgatga 923
>gb|AF412095.1|AF412095 Arabidopsis thaliana At1g09100/F7G19_2 mRNA, complete cds Length = 1448 Score = 192 bits (97), Expect = 1e-45 Identities = 428/537 (79%), Gaps = 1/537 (0%) Strand = Plus / Plus Query: 75 aagcctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctacct 134 |||||||| || || |||||||| ||||| || || |||||||| | || || ||||| Sbjct: 417 aagcctggggacttagttggagttaacaaagatagttacttgattctggatactttacct 476 Query: 135 tcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattat 194 || |||||||| || ||||||| ||||||||||| || ||||||||||| || || || Sbjct: 477 tctgagtatgattcaagagtaaaagcaatggaggtcgacgaaaaacctactgaagactac 536 Query: 195 aatgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgcca 254 ||||| || || || || || ||| |||| || |||||||||||||| || ||||||||| Sbjct: 537 aatgatatagggggactagaaaaacagatacaagaacttgttgaagccattgtgttgcca 596 Query: 255 atgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttcta 314 ||||| || || ||||| || | |||||||| |||||||| || ||||| || || | Sbjct: 597 atgactcataaagagcagttcgaaaagttgggtatccgtccaccaaaaggtgtactcttg 656 Query: 315 tatggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaat 374 ||||| || ||||| || ||||||||||||||||| || || ||||| ||||| || ||| Sbjct: 657 tatggtcctcctggaaccggaaagacgttgatggcccgagcttgtgcagcacagacaaat 716 Query: 375 gcaacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggca 434 ||||| || || ||||| || || || || || ||||||||||||||||| || || ||| Sbjct: 717 gcaactttcctcaaactagcagggccacaacttgttcagatgttcatcggagatggagca 776 Query: 435 aagctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttatt 494 || || ||||| ||||| || ||| ||||| ||||| |||| || || || || || Sbjct: 777 aaacttgtccgtgatgctttcctgcttgcaaaagagaaatccccttgtattatattcata 836 Query: 495 gatgagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggaga 554 ||||||||||| ||||| || |||||||||||||| || ||||||||||| ||| | || Sbjct: 837 gatgagattgacgcaatagggacaaagcgttttgatagcgaagttagtggagac-cgtga 895 Query: 555 agtgcaacgaactatgttggagttgctgaatcagctagatggatttagcagtgatga 611 || ||| | || ||||||||| |||| || ||||| |||||||| ||||| ||||| Sbjct: 896 ggtacaaaggacaatgttggagctgctcaaccagcttgatggattcagcagcgatga 952
>gb|AY050423.1| Arabidopsis thaliana At1g09100/F7G19_2 mRNA, complete cds Length = 1415 Score = 192 bits (97), Expect = 1e-45 Identities = 428/537 (79%), Gaps = 1/537 (0%) Strand = Plus / Plus Query: 75 aagcctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctacct 134 |||||||| || || |||||||| ||||| || || |||||||| | || || ||||| Sbjct: 417 aagcctggggacttagttggagttaacaaagatagttacttgattctggatactttacct 476 Query: 135 tcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattat 194 || |||||||| || ||||||| ||||||||||| || ||||||||||| || || || Sbjct: 477 tctgagtatgattcaagagtaaaagcaatggaggtcgacgaaaaacctactgaagactac 536 Query: 195 aatgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgcca 254 ||||| || || || || || ||| |||| || |||||||||||||| || ||||||||| Sbjct: 537 aatgatatagggggactagaaaaacagatacaagaacttgttgaagccattgtgttgcca 596 Query: 255 atgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttcta 314 ||||| || || ||||| || | |||||||| |||||||| || ||||| || || | Sbjct: 597 atgactcataaagagcagttcgaaaagttgggtatccgtccaccaaaaggtgtactcttg 656 Query: 315 tatggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaat 374 ||||| || ||||| || ||||||||||||||||| || || ||||| ||||| || ||| Sbjct: 657 tatggtcctcctggaaccggaaagacgttgatggcccgagcttgtgcagcacagacaaat 716 Query: 375 gcaacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggca 434 ||||| || || ||||| || || || || || ||||||||||||||||| || || ||| Sbjct: 717 gcaactttcctcaaactagcagggccacaacttgttcagatgttcatcggagatggagca 776 Query: 435 aagctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttatt 494 || || ||||| ||||| || ||| ||||| ||||| |||| || || || || || Sbjct: 777 aaacttgtccgtgatgctttcctgcttgcaaaagagaaatccccttgtattatattcata 836 Query: 495 gatgagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggaga 554 ||||||||||| ||||| || |||||||||||||| || ||||||||||| ||| | || Sbjct: 837 gatgagattgacgcaatagggacaaagcgttttgatagcgaagttagtggagac-cgtga 895 Query: 555 agtgcaacgaactatgttggagttgctgaatcagctagatggatttagcagtgatga 611 || ||| | || ||||||||| |||| || ||||| |||||||| ||||| ||||| Sbjct: 896 ggtacaaaggacaatgttggagctgctcaaccagcttgatggattcagcagcgatga 952
>emb|BX815750.1|CNS0AAOB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZA12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 192 bits (97), Expect = 1e-45 Identities = 428/537 (79%), Gaps = 1/537 (0%) Strand = Plus / Plus Query: 75 aagcctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctacct 134 |||||||| || || |||||||| ||||| || || |||||||| | || || ||||| Sbjct: 444 aagcctggggacttagttggagttaacaaagatagttacttgattctggatactttacct 503 Query: 135 tcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattat 194 || |||||||| || ||||||| ||||||||||| || ||||||||||| || || || Sbjct: 504 tctgagtatgattcaagagtaaaagcaatggaggtcgacgaaaaacctactgaagactac 563 Query: 195 aatgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgcca 254 ||||| || || || || || ||| |||| || |||||||||||||| || ||||||||| Sbjct: 564 aatgatatagggggactagaaaaacagatacaagaacttgttgaagccattgtgttgcca 623 Query: 255 atgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttcta 314 ||||| || || ||||| || | |||||||| |||||||| || ||||| || || | Sbjct: 624 atgactcataaagagcagttcgaaaagttgggtatccgtccaccaaaaggtgtactcttg 683 Query: 315 tatggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaat 374 ||||| || ||||| || ||||||||||||||||| || || ||||| ||||| || ||| Sbjct: 684 tatggtcctcctggaaccggaaagacgttgatggcccgagcttgtgcagcacagacaaat 743 Query: 375 gcaacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggca 434 ||||| || || ||||| || || || || || ||||||||||||||||| || || ||| Sbjct: 744 gcaactttcctcaaactagcagggccacaacttgttcagatgttcatcggagatggagca 803 Query: 435 aagctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttatt 494 || || ||||| ||||| || ||| ||||| ||||| |||| || || || || || Sbjct: 804 aaacttgtccgtgatgctttcctgcttgcaaaagagaaatccccttgtattatattcata 863 Query: 495 gatgagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggaga 554 ||||||||||| ||||| || |||||||||||||| || ||||||||||| ||| | || Sbjct: 864 gatgagattgacgcaatagggacaaagcgttttgatagcgaagttagtggagac-cgtga 922 Query: 555 agtgcaacgaactatgttggagttgctgaatcagctagatggatttagcagtgatga 611 || ||| | || ||||||||| |||| || ||||| |||||||| ||||| ||||| Sbjct: 923 ggtacaaaggacaatgttggagctgctcaaccagcttgatggattcagcagcgatga 979
>emb|X74426.1|LEMA1 L.esculentum LeMA-1 mRNA for putatve Mg-dependent ATPase 1 Length = 1611 Score = 190 bits (96), Expect = 4e-45 Identities = 461/580 (79%), Gaps = 2/580 (0%) Strand = Plus / Plus Query: 57 gttgaccctgacaacctcaagcctggtgatttggttggagtcaacaaggacagctacttg 116 ||||| ||||||||| | || ||||||||| |||||||||| || || ||||| || ||| Sbjct: 408 gttgatcctgacaacttaaaacctggtgatctggttggagtaaataaagacagttatttg 467 Query: 117 atattagacacgctaccttcagagtatgactctcgagtaaaggcaatggaggtagatgaa 176 ||||| ||||| | || || || ||||| ||||| |||||||||||||| || |||||| Sbjct: 468 atattggacaccttgccatctgaatatgattctcgggtaaaggcaatggaagttgatgaa 527 Query: 177 aaacctacggaggattataatgacattggtggcctggagaaagagattcaggaacttgtt 236 || || || || || || |||| ||||| ||| |||||||| ||||||| |||||||| Sbjct: 528 aagccaactgaagactaccatgatattggaggcttggagaaacagattcaagaacttgtc 587 Query: 237 gaagctatagtgttgccaatgacacacaaggagcaatttcagaagttgggaatccgtccc 296 || || || ||| |||| ||||||||| | || | || ||||| || || | ||||| Sbjct: 588 gaggcaattgtgctgcctatgacacaccaagaacggttccagaaattaggtgttcgtcct 647 Query: 297 ccgaaaggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgca 356 || || ||||| ||| | ||||| || |||||||| || || || ||||||| | || Sbjct: 648 ccaaagggagtccttttgtatgggcctcctgggactgggaaaaccctgatggccagagcc 707 Query: 357 tgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatg 416 |||||||||||||| ||||| || ||||| || | || || || ||||| || |||||| Sbjct: 708 tgtgctgcacaaacaaatgctacttttctcaagttagcgggacctcagcttgtgcagatg 767 Query: 417 ttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggcc 476 ||||| || || || ||||| || || || ||||| || |||||||||| ||||| | Sbjct: 768 ttcattggagatggagcaaaacttgttcgtgatgctttccagctggcaaaagagaaatca 827 Query: 477 ccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaa 536 || ||||| ||||| |||||||| |||||||| || || |||||||||||||| || ||| Sbjct: 828 ccttgcataattttcattgatgaaattgatgctataggcacaaagcgttttgatagcgaa 887 Query: 537 gttagtggtgacaggagaagtgcaacgaactatgttggagttgctgaatcagctagatgg 596 |||||||| || |||| || |||||||||||||||||||| || || ||||| ||||| Sbjct: 888 gttagtgggga-tcgagaggtccaacgaactatgttggagttacttaaccagctcgatgg 946 Query: 597 atttagcagtgatgagaggattaaaggtgatagctgcaac 636 |||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 947 ttttagcagcgatgatcggatt-aaggtgatagcagcaac 985
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 188 bits (95), Expect = 2e-44 Identities = 158/179 (88%) Strand = Plus / Plus Query: 27 cagactatattccttcctgtgatcgggctagttgaccctgacaacctcaagcctggtgat 86 ||||||||||||||||||||| | ||||||||||||||||| || ||||||||||||||| Sbjct: 3690631 cagactatattccttcctgtggttgggctagttgaccctgataaactcaagcctggtgat 3690690 Query: 87 ttggttggagtcaacaaggacagctacttgatattagacacgctaccttcagagtatgac 146 ||||||||||| ||||| ||||||||| | ||| | ||||| || || ||||||||||| Sbjct: 3690691 ttggttggagtaaacaaagacagctaccttatactggacacactgccatcagagtatgat 3690750 Query: 147 tctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataatgacattgg 205 || |||||||||||||||||||| ||||||||||| || ||||| || ||||| ||||| Sbjct: 3690751 tcacgagtaaaggcaatggaggtggatgaaaaacccacagaggactacaatgatattgg 3690809 Score = 121 bits (61), Expect = 3e-24 Identities = 151/181 (83%) Strand = Plus / Plus Query: 220 agattcaggaacttgttgaagctatagtgttgccaatgacacacaaggagcaatttcaga 279 ||||||| || ||||| || || || || ||||||||||||||||| || | || || | Sbjct: 3691008 agattcaagagcttgtggaggcaattgttttgccaatgacacacaaagatcggttccaaa 3691067 Query: 280 agttgggaatccgtcccccgaaaggagttcttctatatggaccacctgggacgggaaaga 339 ||||||| || || ||||| |||||||||||| | |||||||||||||| || || |||| Sbjct: 3691068 agttgggcattcgcccccccaaaggagttcttttgtatggaccacctggaactgggaaga 3691127 Query: 340 cgttgatggctcgtgcatgtgctgcacaaaccaatgcaacctttctgaaacttgctggtc 399 | |||||||||||||||||||||||||| || ||||| || || |||||| | ||||||| Sbjct: 3691128 cattgatggctcgtgcatgtgctgcacagacaaatgcgacgttcctgaaattagctggtc 3691187 Query: 400 c 400 | Sbjct: 3691188 c 3691188 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Plus Query: 411 cagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggag 470 |||||||| |||||||| || |||||||| || || ||||| ||| |||| || |||||| Sbjct: 3691481 cagatgtttatcggtgatggagcaaagctggttcgggatgcttttcagcttgctaaggag 3691540 Query: 471 aaggccccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttgac 530 || || |||||||||||||| ||||||||||||||||| ||||| || ||| | |||||| Sbjct: 3691541 aaagctccctgcatcattttcattgatgagattgatgccattgggactaagaggtttgac 3691600 Query: 531 ag 532 || Sbjct: 3691601 ag 3691602 Score = 69.9 bits (35), Expect = 1e-08 Identities = 78/91 (85%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 527 tgacagtgaagttagtggtgacaggagaagtgcaacgaactatgttggagttgctgaatc 586 ||||||||| |||||||||||||| |||||| || | ||||||||||| |||||||| | Sbjct: 3691734 tgacagtgaggttagtggtgacag-agaagttcagaggactatgttggaattgctgaacc 3691792 Query: 587 agctagatggatttagcagtgatgagaggat 617 | || ||||||||||| ||||| ||| |||| Sbjct: 3691793 aactcgatggatttagtagtgacgagcggat 3691823 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 gtgttgttcttaagacatccacaagaca 28 |||||||||| ||||| ||||||||||| Sbjct: 3690038 gtgttgttctgaagacttccacaagaca 3690065
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 188 bits (95), Expect = 2e-44 Identities = 158/179 (88%) Strand = Plus / Plus Query: 27 cagactatattccttcctgtgatcgggctagttgaccctgacaacctcaagcctggtgat 86 ||||||||||||||||||||| | ||||||||||||||||| || ||||||||||||||| Sbjct: 84859 cagactatattccttcctgtggttgggctagttgaccctgataaactcaagcctggtgat 84918 Query: 87 ttggttggagtcaacaaggacagctacttgatattagacacgctaccttcagagtatgac 146 ||||||||||| ||||| ||||||||| | ||| | ||||| || || ||||||||||| Sbjct: 84919 ttggttggagtaaacaaagacagctaccttatactggacacactgccatcagagtatgat 84978 Query: 147 tctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataatgacattgg 205 || |||||||||||||||||||| ||||||||||| || ||||| || ||||| ||||| Sbjct: 84979 tcacgagtaaaggcaatggaggtggatgaaaaacccacagaggactacaatgatattgg 85037 Score = 121 bits (61), Expect = 3e-24 Identities = 151/181 (83%) Strand = Plus / Plus Query: 220 agattcaggaacttgttgaagctatagtgttgccaatgacacacaaggagcaatttcaga 279 ||||||| || ||||| || || || || ||||||||||||||||| || | || || | Sbjct: 85236 agattcaagagcttgtggaggcaattgttttgccaatgacacacaaagatcggttccaaa 85295 Query: 280 agttgggaatccgtcccccgaaaggagttcttctatatggaccacctgggacgggaaaga 339 ||||||| || || ||||| |||||||||||| | |||||||||||||| || || |||| Sbjct: 85296 agttgggcattcgcccccccaaaggagttcttttgtatggaccacctggaactgggaaga 85355 Query: 340 cgttgatggctcgtgcatgtgctgcacaaaccaatgcaacctttctgaaacttgctggtc 399 | |||||||||||||||||||||||||| || ||||| || || |||||| | ||||||| Sbjct: 85356 cattgatggctcgtgcatgtgctgcacagacaaatgcgacgttcctgaaattagctggtc 85415 Query: 400 c 400 | Sbjct: 85416 c 85416 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Plus Query: 411 cagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggag 470 |||||||| |||||||| || |||||||| || || ||||| ||| |||| || |||||| Sbjct: 85709 cagatgtttatcggtgatggagcaaagctggttcgggatgcttttcagcttgctaaggag 85768 Query: 471 aaggccccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttgac 530 || || |||||||||||||| ||||||||||||||||| ||||| || ||| | |||||| Sbjct: 85769 aaagctccctgcatcattttcattgatgagattgatgccattgggactaagaggtttgac 85828 Query: 531 ag 532 || Sbjct: 85829 ag 85830 Score = 69.9 bits (35), Expect = 1e-08 Identities = 78/91 (85%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 527 tgacagtgaagttagtggtgacaggagaagtgcaacgaactatgttggagttgctgaatc 586 ||||||||| |||||||||||||| |||||| || | ||||||||||| |||||||| | Sbjct: 85962 tgacagtgaggttagtggtgacag-agaagttcagaggactatgttggaattgctgaacc 86020 Query: 587 agctagatggatttagcagtgatgagaggat 617 | || ||||||||||| ||||| ||| |||| Sbjct: 86021 aactcgatggatttagtagtgacgagcggat 86051 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 gtgttgttcttaagacatccacaagaca 28 |||||||||| ||||| ||||||||||| Sbjct: 84266 gtgttgttctgaagacttccacaagaca 84293
>dbj|AB071016.1| Oryza sativa (japonica cultivar-group) OsRPT5b mRNA for 26S proteasome regulatory particle triple-A ATPase subunit5b, partial cds Length = 758 Score = 186 bits (94), Expect = 6e-44 Identities = 238/282 (84%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 384 ctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaagctcgtc 443 |||||| | |||||||| || |||| |||||||| |||||||| || |||||||| || Sbjct: 10 ctgaaattagctggtccacaattagtccagatgtttatcggtgatggagcaaagctggtt 69 Query: 444 cgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgatgagatt 503 || ||||| ||| |||| || |||||||| || |||||||||||||| |||||||||||| Sbjct: 70 cgggatgcttttcagcttgctaaggagaaagctccctgcatcattttcattgatgagatt 129 Query: 504 gatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggagaagtgcaacg 563 ||||| ||||| || ||| | ||||||||||| ||||||||||||| ||||||| || | Sbjct: 130 gatgccattgggactaagaggtttgacagtgaggttagtggtgaca-gagaagttcagag 188 Query: 564 aactatgttggagttgctgaatcagctagatggatttagcagtgatgagaggattaaagg 623 ||||||||||| |||||||| || || ||||||||||| ||||| ||| ||| |||||| Sbjct: 189 gactatgttggaattgctgaaccaactcgatggatttagtagtgacgagcgga-taaagg 247 Query: 624 tgatagctgcaacccaatcgtgcagatattcttgatcctgct 665 | ||||| |||| | |||||||| || ||||||||||||||| Sbjct: 248 tcatagcggcaa-cgaatcgtgctgacattcttgatcctgct 288
>ref|NM_111426.2| Arabidopsis thaliana RPT5A; ATPase/ calmodulin binding AT3G05530 (RPT5A) mRNA, complete cds Length = 1621 Score = 155 bits (78), Expect = 2e-34 Identities = 403/510 (79%), Gaps = 1/510 (0%) Strand = Plus / Plus Query: 78 cctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctaccttca 137 |||||||| ||||||||||| ||||| || ||||||||||| || || || | || || Sbjct: 502 cctggtgacttggttggagttaacaaagatagctacttgattttggataccttgccatcc 561 Query: 138 gagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataat 197 |||||||||||| | || || || |||||||| ||||||||||| || || ||||| ||| Sbjct: 562 gagtatgactctagggttaaagccatggaggtcgatgaaaaaccaactgaagattacaat 621 Query: 198 gacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaatg 257 |||||||| || || ||||| |||| || || ||||| || || || ||| | || ||| Sbjct: 622 gacattggaggactagagaagcagatccaagagcttgtagaggcaattgtgcttcccatg 681 Query: 258 acacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctatat 317 || |||||||| | ||| ||||| |||| | ||||| || || ||||| || | ||| Sbjct: 682 acgcacaaggaacgttttgagaagctgggtgttcgtccaccaaagggagtgctcttgtat 741 Query: 318 ggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgca 377 || || || ||||| || || || || ||||||||||| || || ||||| |||||||| Sbjct: 742 ggtcccccagggactggtaaaactttaatggctcgtgcctgcgcagcacagaccaatgcc 801 Query: 378 acctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaag 437 ||||| || ||| | || || || || | || ||||||||||| || ||||| |||||| Sbjct: 802 accttccttaaattggcaggccctcaattggtccagatgttcattggagacggagcaaag 861 Query: 438 ctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgat 497 || ||||| ||||||||| | || || || ||||| || || ||||| || || || ||| Sbjct: 862 cttgtccgtgatgcctttcaacttgccaaagagaaagctccgtgcattatcttcatagat 921 Query: 498 gagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggagaagt 557 || || ||||| ||||| ||||||||||| ||||||||||| || || |||||| ||||| Sbjct: 922 gaaatcgatgccattggtacaaagcgtttcgacagtgaagtcagcggagacagg-gaagt 980 Query: 558 gcaacgaactatgttggagttgctgaatca 587 ||| | ||||||||||||||||| ||||| Sbjct: 981 gcagaggactatgttggagttgctcaatca 1010
>gb|AY062705.1| Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT5a (At3g05530; F22F7.1) mRNA, complete cds Length = 1520 Score = 155 bits (78), Expect = 2e-34 Identities = 403/510 (79%), Gaps = 1/510 (0%) Strand = Plus / Plus Query: 78 cctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctaccttca 137 |||||||| ||||||||||| ||||| || ||||||||||| || || || | || || Sbjct: 501 cctggtgacttggttggagttaacaaagatagctacttgattttggataccttgccatcc 560 Query: 138 gagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataat 197 |||||||||||| | || || || |||||||| ||||||||||| || || ||||| ||| Sbjct: 561 gagtatgactctagggttaaagccatggaggtcgatgaaaaaccaactgaagattacaat 620 Query: 198 gacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaatg 257 |||||||| || || ||||| |||| || || ||||| || || || ||| | || ||| Sbjct: 621 gacattggaggactagagaagcagatccaagagcttgtagaggcaattgtgcttcccatg 680 Query: 258 acacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctatat 317 || |||||||| | ||| ||||| |||| | ||||| || || ||||| || | ||| Sbjct: 681 acgcacaaggaacgttttgagaagctgggtgttcgtccaccaaagggagtgctcttgtat 740 Query: 318 ggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgca 377 || || || ||||| || || || || ||||||||||| || || ||||| |||||||| Sbjct: 741 ggtcccccagggactggtaaaactttaatggctcgtgcctgcgcagcacagaccaatgcc 800 Query: 378 acctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaag 437 ||||| || ||| | || || || || | || ||||||||||| || ||||| |||||| Sbjct: 801 accttccttaaattggcaggccctcaattggtccagatgttcattggagacggagcaaag 860 Query: 438 ctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgat 497 || ||||| ||||||||| | || || || ||||| || || ||||| || || || ||| Sbjct: 861 cttgtccgtgatgcctttcaacttgccaaagagaaagctccgtgcattatcttcatagat 920 Query: 498 gagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggagaagt 557 || || ||||| ||||| ||||||||||| ||||||||||| || || |||||| ||||| Sbjct: 921 gaaatcgatgccattggtacaaagcgtttcgacagtgaagtcagcggagacagg-gaagt 979 Query: 558 gcaacgaactatgttggagttgctgaatca 587 ||| | ||||||||||||||||| ||||| Sbjct: 980 gcagaggactatgttggagttgctcaatca 1009
>gb|AF123394.1|AF123394 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT5a (RPT5a) mRNA, complete cds Length = 1390 Score = 155 bits (78), Expect = 2e-34 Identities = 403/510 (79%), Gaps = 1/510 (0%) Strand = Plus / Plus Query: 78 cctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctaccttca 137 |||||||| ||||||||||| ||||| || ||||||||||| || || || | || || Sbjct: 430 cctggtgacttggttggagttaacaaagatagctacttgattttggataccttgccatcc 489 Query: 138 gagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataat 197 |||||||||||| | || || || |||||||| ||||||||||| || || ||||| ||| Sbjct: 490 gagtatgactctagggttaaagccatggaggtcgatgaaaaaccaactgaagattacaat 549 Query: 198 gacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaatg 257 |||||||| || || ||||| |||| || || ||||| || || || ||| | || ||| Sbjct: 550 gacattggaggactagagaagcagatccaagagcttgtagaggcaattgtgcttcccatg 609 Query: 258 acacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctatat 317 || |||||||| | ||| ||||| |||| | ||||| || || ||||| || | ||| Sbjct: 610 acgcacaaggaacgttttgagaagctgggtgttcgtccaccaaagggagtgctcttgtat 669 Query: 318 ggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgca 377 || || || ||||| || || || || ||||||||||| || || ||||| |||||||| Sbjct: 670 ggtcccccagggactggtaaaactttaatggctcgtgcctgcgcagcacagaccaatgcc 729 Query: 378 acctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaag 437 ||||| || ||| | || || || || | || ||||||||||| || ||||| |||||| Sbjct: 730 accttccttaaattggcaggccctcaattggtccagatgttcattggagacggagcaaag 789 Query: 438 ctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgat 497 || ||||| ||||||||| | || || || ||||| || || ||||| || || || ||| Sbjct: 790 cttgtccgtgatgcctttcaacttgccaaagagaaagctccgtgcattatcttcatagat 849 Query: 498 gagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggagaagt 557 || || ||||| ||||| ||||||||||| ||||||||||| || || |||||| ||||| Sbjct: 850 gaaatcgatgccattggtacaaagcgtttcgacagtgaagtcagcggagacagg-gaagt 908 Query: 558 gcaacgaactatgttggagttgctgaatca 587 ||| | ||||||||||||||||| ||||| Sbjct: 909 gcagaggactatgttggagttgctcaatca 938
>gb|AF081573.1|AF081573 Arabidopsis thaliana 19S proteasome regulatory complex subunit S6A mRNA, complete cds Length = 1275 Score = 155 bits (78), Expect = 2e-34 Identities = 403/510 (79%), Gaps = 1/510 (0%) Strand = Plus / Plus Query: 78 cctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctaccttca 137 |||||||| ||||||||||| ||||| || ||||||||||| || || || | || || Sbjct: 394 cctggtgacttggttggagttaacaaagatagctacttgattttggataccttgccatcc 453 Query: 138 gagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataat 197 |||||||||||| | || || || |||||||| ||||||||||| || || ||||| ||| Sbjct: 454 gagtatgactctagggttaaagccatggaggtcgatgaaaaaccaactgaagattacaat 513 Query: 198 gacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaatg 257 |||||||| || || ||||| |||| || || ||||| || || || ||| | || ||| Sbjct: 514 gacattggaggactagagaagcagatccaagagcttgtagaggcaattgtgcttcccatg 573 Query: 258 acacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctatat 317 || |||||||| | ||| ||||| |||| | ||||| || || ||||| || | ||| Sbjct: 574 acgcacaaggaacgttttgagaagctgggtgttcgtccaccaaagggagtgctcttgtat 633 Query: 318 ggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgca 377 || || || ||||| || || || || ||||||||||| || || ||||| |||||||| Sbjct: 634 ggtcccccagggactggtaaaactttaatggctcgtgcctgcgcagcacagaccaatgcc 693 Query: 378 acctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaag 437 ||||| || ||| | || || || || | || ||||||||||| || ||||| |||||| Sbjct: 694 accttccttaaattggcaggccctcaattggtccagatgttcattggagacggagcaaag 753 Query: 438 ctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgat 497 || ||||| ||||||||| | || || || ||||| || || ||||| || || || ||| Sbjct: 754 cttgtccgtgatgcctttcaacttgccaaagagaaagctccgtgcattatcttcatagat 813 Query: 498 gagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggagaagt 557 || || ||||| ||||| ||||||||||| ||||||||||| || || |||||| ||||| Sbjct: 814 gaaatcgatgccattggtacaaagcgtttcgacagtgaagtcagcggagacagg-gaagt 872 Query: 558 gcaacgaactatgttggagttgctgaatca 587 ||| | ||||||||||||||||| ||||| Sbjct: 873 gcagaggactatgttggagttgctcaatca 902
>dbj|D88663.1| Brassica campestris mRNA for Tat binding protein 1, complete cds Length = 1433 Score = 153 bits (77), Expect = 9e-34 Identities = 238/289 (82%), Gaps = 2/289 (0%) Strand = Plus / Plus Query: 345 atggctcgtgcatgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcag 404 ||||||||||| ||||| ||||| |||||||| ||||| || ||| | || ||||| ||| Sbjct: 720 atggctcgtgcctgtgcagcacagaccaatgccaccttcctaaaattggcaggtcctcag 779 Query: 405 ctagttcagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggca 464 | || |||||||| || || ||||| ||||| || || || ||||||||| | || ||| Sbjct: 780 ttggtccagatgtttattggagacggagcaaaacttgttcgtgatgcctttcaactagca 839 Query: 465 aaggagaaggccccctgcatcatttttattgatgagattgatgcaattggaacaaagcgt 524 || ||||| || || || ||||| ||||| |||||||| ||||||||||| ||||||||| Sbjct: 840 aaagagaaagctccgtgtatcatctttatagatgagatcgatgcaattggtacaaagcgt 899 Query: 525 tttgacagtgaagttagtggtgacaggagaagtgcaacgaactatgttggagttgctgaa 584 |||||||||||||| || || |||||| |||||||| | |||||||||||| |||| || Sbjct: 900 tttgacagtgaagtaagcggagacagg-gaagtgcagaggactatgttggagctgcttaa 958 Query: 585 tcagctagatggatttagcagtgatgagaggattaaaggtgatagctgc 633 ||||| |||||||| || || |||||| | ||| |||||||| ||||| Sbjct: 959 ccagcttgatggattcagtagcgatgagcgtatt-aaggtgattgctgc 1006 Score = 71.9 bits (36), Expect = 3e-09 Identities = 156/196 (79%) Strand = Plus / Plus Query: 75 aagcctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctacct 134 |||||||| || |||||||| || || || ||||| |||||||| || || || | || Sbjct: 450 aagcctggggacttggttggggtaaataaagacagttacttgattttggatactttgcca 509 Query: 135 tcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattat 194 || ||||||||||| |||| || || |||||||| ||||| |||||||| || ||||| Sbjct: 510 tctgagtatgactcgagagttaaagccatggaggttgatgagaaacctaccgaagattac 569 Query: 195 aatgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgcca 254 ||||||||||| || |||||||| |||| || || ||||| || || || ||| | || Sbjct: 570 aatgacattggaggactggagaagcagatccaagagcttgtggaggcaattgtgcttccc 629 Query: 255 atgacacacaaggagc 270 ||||| |||||||||| Sbjct: 630 atgacgcacaaggagc 645
>gb|BT000140.1| Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT5a (At3g05530) mRNA, complete cds Length = 1351 Score = 147 bits (74), Expect = 5e-32 Identities = 402/510 (78%), Gaps = 1/510 (0%) Strand = Plus / Plus Query: 78 cctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctaccttca 137 |||||||| ||||||||||| ||||| || ||||||||||| || || || | || || Sbjct: 394 cctggtgacttggttggagttaacaaagatagctacttgattttggataccttgccatcc 453 Query: 138 gagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataat 197 |||||||||||| | || || || |||||||| ||||||||||| || || ||||| ||| Sbjct: 454 gagtatgactctagggttaaagccatggaggtcgatgaaaaaccaactgaagattacaat 513 Query: 198 gacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaatg 257 |||||||| || || ||||| |||| || || ||||| || || || ||| | || ||| Sbjct: 514 gacattggaggactagagaagcagatccaagagcttgtagaggcaattgtgcttcccatg 573 Query: 258 acacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctatat 317 || |||||||| | ||| ||||| |||| | ||||| || || ||||| || | ||| Sbjct: 574 acgcacaaggaacgttttgagaagctgggtgttcgtccaccaaagggagtgctcttgtat 633 Query: 318 ggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgca 377 || || || ||||| || || || || ||||||||||| || || ||||| |||||||| Sbjct: 634 ggtcccccagggactggtaaaactttaatggctcgtgcctgcgcagcacagaccaatgcc 693 Query: 378 acctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaag 437 ||||| || ||| | || || || || | || ||||||||||| || ||||| |||||| Sbjct: 694 accttccttaaattggcaggccctcaattggtccagatgttcattggagacggagcaaag 753 Query: 438 ctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgat 497 || ||||| ||||||||| | || || || ||||| || || ||||| || || || || Sbjct: 754 cttgtccgtgatgcctttcaacttgccaaagagaaagctccgtgcattatcttcatatat 813 Query: 498 gagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggagaagt 557 || || ||||| ||||| ||||||||||| ||||||||||| || || |||||| ||||| Sbjct: 814 gaaatcgatgccattggtacaaagcgtttcgacagtgaagtcagcggagacagg-gaagt 872 Query: 558 gcaacgaactatgttggagttgctgaatca 587 ||| | ||||||||||||||||| ||||| Sbjct: 873 gcagaggactatgttggagttgctcaatca 902
>emb|BX823750.1|CNS0A4NL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZA09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1457 Score = 147 bits (74), Expect = 5e-32 Identities = 402/510 (78%), Gaps = 1/510 (0%) Strand = Plus / Plus Query: 78 cctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctaccttca 137 |||||||| ||||||||||| ||||| || ||||||||||| || || || | || || Sbjct: 494 cctggtgacttggttggagttaacaaagatagctacttgattttggataccttgccatcc 553 Query: 138 gagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataat 197 |||||||||||| | || || || |||||||| ||||||||||| || || ||||| ||| Sbjct: 554 gagtatgactctagggttaaagccatggaggtcgatgaaaaaccaactgaagattacaat 613 Query: 198 gacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaatg 257 |||||||| || || ||||| |||| || || ||||| || || || ||| | || ||| Sbjct: 614 gacattggaggactagagaagcagatccaagagcttgtagaggcaattgtgcttcccatg 673 Query: 258 acacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctatat 317 || |||||||| | ||| ||||| |||| | ||||| || || ||||| || | ||| Sbjct: 674 acgcacaaggaacgttttgagaagctgggtgttcgtccaccaaagggagtgctcttgtat 733 Query: 318 ggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgca 377 || || || ||||| || || || || ||||||||||| || || ||||| |||||||| Sbjct: 734 ggtcccccagggactggtaaaactttaatggctcgtgcctgcgcagcacagaccaatgcc 793 Query: 378 acctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaag 437 ||||| || ||| | || || || || | || ||||||||||| || ||||| |||||| Sbjct: 794 accttccttaaattggcaggccctcaattggtccagatgttcattggagacggagcaaag 853 Query: 438 ctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgat 497 || ||||| ||||||||| | || || || ||||| || || ||||| || || || ||| Sbjct: 854 cttgtccgtgatgcctttcaacttgccaaagagaaagctccgtgcattatcttcatagat 913 Query: 498 gagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggagaagt 557 || || ||||| ||||| ||||||||| | ||||||||||| || || |||||| ||||| Sbjct: 914 gaaatcgatgccattggtacaaagcgtctcgacagtgaagtcagcggagacagg-gaagt 972 Query: 558 gcaacgaactatgttggagttgctgaatca 587 ||| | ||||||||||||||||| ||||| Sbjct: 973 gcagaggactatgttggagttgctcaatca 1002
>emb|BX823732.1|CNS0A5FH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1467 Score = 131 bits (66), Expect = 3e-27 Identities = 402/510 (78%), Gaps = 3/510 (0%) Strand = Plus / Plus Query: 78 cctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctaccttca 137 |||||||| ||||||||||| ||||| || ||||||||||| || || || | || || Sbjct: 471 cctggtgacttggttggagttaacaaagatagctacttgattttggataccttgccatcc 530 Query: 138 gagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataat 197 |||||||||||| | || || || |||||||| ||||||||||| || || ||||| || Sbjct: 531 gagtatgactctagggttaaagccatggaggtcgatgaaaaaccaactgaagattacgat 590 Query: 198 gacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaatg 257 |||||||| || || ||||| |||| || || ||||| || || || ||| | || ||| Sbjct: 591 gacattggaggactagagaagcagatccaagagcttgtagaggcaattgtgcttcccatg 650 Query: 258 acacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctatat 317 || |||||||| | ||| ||||| |||| | ||||| || || ||||| || | ||| Sbjct: 651 acgcacaaggaacgttttgagaagctgggtgttcgtccaccaaagggagtgctcttgtat 710 Query: 318 ggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgca 377 || || || ||||| ||||| || || ||||||||||| | || ||||| |||||||| Sbjct: 711 ggtcccccagggactggaaa-actttaatggctcgtgcc-gcgcagcacagaccaatgcc 768 Query: 378 acctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaag 437 ||||| || ||| | || || || || | || ||||||||||| || ||||| |||||| Sbjct: 769 accttccttaaattggcaggccctcaattggtccagatgttcattggagacggagcaaag 828 Query: 438 ctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgat 497 || ||||| ||||||||| | || || || ||||| || || ||||| || || || ||| Sbjct: 829 cttgtccgtgatgcctttcaacttgccaaagagaaagctccgtgcattatcttcatagat 888 Query: 498 gagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggagaagt 557 || || ||||| ||||| ||||||||||| ||||||||||| || || |||||| ||||| Sbjct: 889 gaaatcgatgccattggtacaaagcgtttcgacagtgaagtcagcggagacagg-gaagt 947 Query: 558 gcaacgaactatgttggagttgctgaatca 587 ||| | ||||||||||||||||| ||||| Sbjct: 948 gcagaggactatgttggagttgctcaatca 977
>emb|BX842123.1|CNS09YBF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB9ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1435 Score = 113 bits (57), Expect = 8e-22 Identities = 403/513 (78%), Gaps = 4/513 (0%) Strand = Plus / Plus Query: 78 cctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctaccttca 137 |||||||| ||||||||||| ||||| || ||||||||||| || || || | || || Sbjct: 455 cctggtgacttggttggagttaacaaagatagctacttgattttggataccttgccatcc 514 Query: 138 gagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataat 197 |||||||||||| | || || || |||||||| ||||||||||| || || ||||| ||| Sbjct: 515 gagtatgactctagggttaaagccatggaggtcgatgaaaaaccaactgaagattacaat 574 Query: 198 gacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaatg 257 |||||||| || || ||||| |||| || || ||||| || || || ||| | || ||| Sbjct: 575 gacattggaggactagagaagcagatccaagagcttgtagaggcaattgtgcttcccatg 634 Query: 258 acacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctatat 317 || |||||||| | ||| ||||| |||| | ||||| || || ||||| || | ||| Sbjct: 635 acgcacaaggaacgttttgagaagctgggtgttcgtccaccaaagggagtgctcttgtat 694 Query: 318 ggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgca 377 || || || ||||| || || || || ||||||||||| || || ||||| |||||||| Sbjct: 695 ggtcccccagggactggtaaaactttaatggctcgtgcctgcgcagcacagaccaatgcc 754 Query: 378 acctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaag 437 ||||| || ||| | || || || || | || ||||||||||| || ||||| |||||| Sbjct: 755 accttccttaaattggcaggccctcaattggtccagatgttcattggagacggagcaaag 814 Query: 438 ctcgt-ccgagatgcctttgagctggcaaaggagaaggc-cccctgcatcat-ttttatt 494 || || ||| ||||||||| | || || || ||||| || | | ||||| || || || Sbjct: 815 cttgtcccgtgatgcctttcaacttgccaaagagaaagctcgcgtgcattatgcttcata 874 Query: 495 gatgagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgacaggaga 554 ||||| || ||||| ||||| ||||||||||| ||||||||||| || || |||||| || Sbjct: 875 gatgaaatcgatgccattggtacaaagcgtttcgacagtgaagtcagcggagacagg-ga 933 Query: 555 agtgcaacgaactatgttggagttgctgaatca 587 |||||| | ||||||||||||||||| ||||| Sbjct: 934 agtgcagaggactatgttggagttgctcaatca 966
>ref|XM_843909.1| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) (LOC607287), mRNA Length = 1316 Score = 103 bits (52), Expect = 7e-19 Identities = 313/400 (78%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| |||||||| ||||| | || ||||| | |||| Sbjct: 401 cagagtatgactcacgggtgaaggccatggaggtggatgagaggcccacggaacaatata 460 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 |||||| || |||||||| || |||||||||| || || || ||||| || ||||||| Sbjct: 461 gtgacatcgggggcctggataagcagattcaggagctggtggaggctattgtcttgccaa 520 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | || |||| ||||| |||| || || ||||| || | | | Sbjct: 521 tgaaccacaaggagaagttcgagaacttggggatccagcctccaaaaggggtgttgatgt 580 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || || || || |||||| || |||| || || || |||||||||||||| | Sbjct: 581 atggccccccaggtacagggaagacgctgctggcccgggcttgcgctgcacaaaccaagg 640 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| ||||| || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 641 ctaccttcctgaagctggctggcccccagctggtgcagatgttcattggggatggtgcca 700 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || || | ||| || || |||| Sbjct: 701 agctggtccgggatgcctttgccctggccaaggagaaagcgccatccattatcttcattg 760 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| | ||| || ||||| ||||||||||| Sbjct: 761 atgagctggatgccactggcactaagcgctttgacagtga 800
>ref|XM_855649.1| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Proteasome subunit P50), transcript variant 3 (LOC475980), mRNA Length = 1197 Score = 103 bits (52), Expect = 7e-19 Identities = 313/400 (78%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| |||||||| ||||| | || ||||| | |||| Sbjct: 300 cagagtatgactcacgggtgaaggccatggaggtggatgagaggcccacggaacaatata 359 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 |||||| || |||||||| || |||||||||| || || || ||||| || ||||||| Sbjct: 360 gtgacatcgggggcctggataagcagattcaggagctggtggaggctattgtcttgccaa 419 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | || |||| ||||| |||| || || ||||| || | | | Sbjct: 420 tgaaccacaaggagaagttcgagaacttggggatccagcctccaaaaggggtgttgatgt 479 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || || || || |||||| || |||| || || || |||||||||||||| | Sbjct: 480 atggccccccaggtacagggaagacgctgctggcccgggcttgcgctgcacaaaccaagg 539 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| ||||| || ||||| || ||||| || |||||||| || || || || || | Sbjct: 540 ctaccttcctgaagctggctggcccccagctggtgcagatgtttattggggatggtgcca 599 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || || | ||| || || |||| Sbjct: 600 agctggtccgggatgcctttgccctggccaaggagaaagcgccatccattatcttcattg 659 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| ||||| || ||||| ||||||||||| Sbjct: 660 atgagctggatgccattggcactaagcgctttgacagtga 699
>gb|AF281342.1| Oncorhynchus mykiss TAT-binding protein 1 mRNA, partial cds Length = 581 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 360 gctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatgttc 419 ||||| || ||||| || || ||||| || || ||||| || ||||| || ||||||||| Sbjct: 22 gctgcccagaccaaggccacatttctcaagctggctggcccacagctggtccagatgttc 81 Query: 420 atcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggccccc 479 || ||||| || || ||||| |||||||| ||||||| ||||| ||||||||||||||| Sbjct: 82 attggtgatggtgccaagcttgtccgagacgcctttgccctggccaaggagaaggccccc 141 Query: 480 tgcatcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtga 535 | |||||| || || |||||| | || || |||||||| || || ||||||||||| Sbjct: 142 tccatcatcttcatagatgagctagacgccattggaaccaaacggtttgacagtga 197
>gb|AY112136.1| Zea mays CL34715_1 mRNA sequence Length = 730 Score = 95.6 bits (48), Expect = 2e-16 Identities = 125/148 (84%), Gaps = 2/148 (1%) Strand = Plus / Minus Query: 489 tttattgatgagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgac 548 |||||||||||||| ||||| ||||| || || |||||||| ||||||||||| ||||| Sbjct: 647 tttattgatgagatagatgccattggcaccaaacgttttgatagtgaagttagcggtgat 588 Query: 549 aggagaagtgcaacgaactatgttggagttgctgaatcagctagatggatttagcagtga 608 | ||||||| || || || |||||||| || ||||||| || |||||||| ||||| || Sbjct: 587 a-gagaagttcagcggacaatgttggaattattgaatcaactggatggattcagcagcga 529 Query: 609 tgagaggattaaaggtgatagctgcaac 636 ||||| || ||||||| ||||||||||| Sbjct: 528 tgaga-gaataaaggtcatagctgcaac 502
>ref|XM_502605.1| Yarrowia lipolytica CLIB122, YALI0D09119g predicted mRNA Length = 1242 Score = 91.7 bits (46), Expect = 3e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 402 cagctagttcagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctg 461 ||||| |||||||||||||| |||||||| || ||||| || ||||| ||||||| ||| Sbjct: 685 cagctggttcagatgttcattggtgacggtgccaagctggtgcgagacgcctttgctctg 744 Query: 462 gcaaaggagaaggccccctgcatcatttttattgatgagattgatgcaattggaacaaag 521 || ||||||||||||||| ||||||||| || || ||| | ||||| |||||||| ||| Sbjct: 745 gccaaggagaaggcccccaccatcattttcatcgacgagctggatgccattggaacgaag 804 Query: 522 cg 523 || Sbjct: 805 cg 806
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 91.7 bits (46), Expect = 3e-15 Identities = 103/122 (84%) Strand = Plus / Minus Query: 402 cagctagttcagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctg 461 ||||| |||||||||||||| |||||||| || ||||| || ||||| ||||||| ||| Sbjct: 1160448 cagctggttcagatgttcattggtgacggtgccaagctggtgcgagacgcctttgctctg 1160389 Query: 462 gcaaaggagaaggccccctgcatcatttttattgatgagattgatgcaattggaacaaag 521 || ||||||||||||||| ||||||||| || || ||| | ||||| |||||||| ||| Sbjct: 1160388 gccaaggagaaggcccccaccatcattttcatcgacgagctggatgccattggaacgaag 1160329 Query: 522 cg 523 || Sbjct: 1160328 cg 1160327
>ref|XM_533187.2| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Proteasome subunit P50), transcript variant 1 (LOC475980), mRNA Length = 1304 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Plus Query: 360 gctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatgttc 419 |||||||||||||| || ||||| ||||| || ||||| || ||||| || |||||||| Sbjct: 631 gctgcacaaaccaaggctaccttcctgaagctggctggcccccagctggtgcagatgttt 690 Query: 420 atcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggccccc 479 || || || || || ||||| ||||| |||||||||| ||||| |||||||| || || Sbjct: 691 attggggatggtgccaagctggtccgggatgcctttgccctggccaaggagaaagcgcca 750 Query: 480 tgcatcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtga 535 | ||| || || ||||||||| | ||||| ||||| || ||||| ||||||||||| Sbjct: 751 tccattatcttcattgatgagctggatgccattggcactaagcgctttgacagtga 806
>ref|XM_855582.1| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Proteasome subunit P50), transcript variant 2 (LOC475980), mRNA Length = 1369 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Plus Query: 360 gctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatgttc 419 |||||||||||||| || ||||| ||||| || ||||| || ||||| || |||||||| Sbjct: 696 gctgcacaaaccaaggctaccttcctgaagctggctggcccccagctggtgcagatgttt 755 Query: 420 atcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggccccc 479 || || || || || ||||| ||||| |||||||||| ||||| |||||||| || || Sbjct: 756 attggggatggtgccaagctggtccgggatgcctttgccctggccaaggagaaagcgcca 815 Query: 480 tgcatcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtga 535 | ||| || || ||||||||| | ||||| ||||| || ||||| ||||||||||| Sbjct: 816 tccattatcttcattgatgagctggatgccattggcactaagcgctttgacagtga 871 Score = 44.1 bits (22), Expect = 0.58 Identities = 76/94 (80%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| |||||||| ||||| | || ||||| | |||| Sbjct: 456 cagagtatgactcacgggtgaaggccatggaggtggatgagaggcccacggaacaatata 515 Query: 196 atgacattggtggcctggagaaagagattcagga 229 |||||| || |||||||| || |||||||||| Sbjct: 516 gtgacatcgggggcctggataagcagattcagga 549
>gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete sequence Length = 125129 Score = 87.7 bits (44), Expect = 4e-14 Identities = 125/152 (82%) Strand = Plus / Minus Query: 57 gttgaccctgacaacctcaagcctggtgatttggttggagtcaacaaggacagctacttg 116 |||||||||||||| || || ||||||||| | ||||| || ||||| || || ||||| Sbjct: 7530 gttgaccctgacaagctaaaacctggtgatcttgttggtgtaaacaaagatagttactta 7471 Query: 117 atattagacacgctaccttcagagtatgactctcgagtaaaggcaatggaggtagatgaa 176 || || || || || ||||| |||||||| |||||||| ||||| ||||| || |||||| Sbjct: 7470 atcttggatactctgccttctgagtatgattctcgagttaaggccatggaagttgatgaa 7411 Query: 177 aaacctacggaggattataatgacattggtgg 208 || || || ||||| || |||||||||||||| Sbjct: 7410 aagccaacagaggactacaatgacattggtgg 7379 Score = 67.9 bits (34), Expect = 4e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 530 cagtgaagttagtggtgacaggagaagtgcaacgaactatgttggagttgctgaatcagc 589 ||||||||| ||||| |||||| || || ||| |||| ||||| |||||||| ||||||| Sbjct: 6339 cagtgaagtgagtggggacagg-gaggttcaaagaaccatgttagagttgctcaatcagc 6281 Query: 590 tagatggatttagcagtgatga 611 | ||||| |||||||||||||| Sbjct: 6280 ttgatggttttagcagtgatga 6259 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 411 cagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggag 470 ||||||||||| || ||||| ||||| || ||||| ||||| || | || ||||| || Sbjct: 6626 cagatgttcataggagacggagcaaaacttgtccgtgatgctttccaactcgcaaaagaa 6567 Query: 471 aaggccccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttga 529 ||| | || ||||| || ||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 6566 aagtcaccatgcattatatttatagatgaaatcgatgcaattggtacaaagcgttttga 6508 Score = 56.0 bits (28), Expect = 2e-04 Identities = 41/44 (93%), Gaps = 1/44 (2%) Strand = Plus / Minus Query: 621 aggtgatagctgcaacccaatcgtgcagatattcttgatcctgc 664 |||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 5941 aggtgatagcagcaaca-aatcgtgcagatattcttgatcctgc 5899
>gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete sequence Length = 110437 Score = 87.7 bits (44), Expect = 4e-14 Identities = 125/152 (82%) Strand = Plus / Plus Query: 57 gttgaccctgacaacctcaagcctggtgatttggttggagtcaacaaggacagctacttg 116 |||||||||||||| || || ||||||||| | ||||| || ||||| || || ||||| Sbjct: 18735 gttgaccctgacaagctaaaacctggtgatcttgttggtgtaaacaaagatagttactta 18794 Query: 117 atattagacacgctaccttcagagtatgactctcgagtaaaggcaatggaggtagatgaa 176 || || || || || ||||| |||||||| |||||||| ||||| ||||| || |||||| Sbjct: 18795 atcttggatactctgccttctgagtatgattctcgagttaaggccatggaagttgatgaa 18854 Query: 177 aaacctacggaggattataatgacattggtgg 208 || || || ||||| || |||||||||||||| Sbjct: 18855 aagccaacagaggactacaatgacattggtgg 18886 Score = 67.9 bits (34), Expect = 4e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 530 cagtgaagttagtggtgacaggagaagtgcaacgaactatgttggagttgctgaatcagc 589 ||||||||| ||||| |||||| || || ||| |||| ||||| |||||||| ||||||| Sbjct: 19926 cagtgaagtgagtggggacagg-gaggttcaaagaaccatgttagagttgctcaatcagc 19984 Query: 590 tagatggatttagcagtgatga 611 | ||||| |||||||||||||| Sbjct: 19985 ttgatggttttagcagtgatga 20006 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 411 cagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggag 470 ||||||||||| || ||||| ||||| || ||||| ||||| || | || ||||| || Sbjct: 19639 cagatgttcataggagacggagcaaaacttgtccgtgatgctttccaactcgcaaaagaa 19698 Query: 471 aaggccccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttga 529 ||| | || ||||| || ||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 19699 aagtcaccatgcattatatttatagatgaaatcgatgcaattggtacaaagcgttttga 19757 Score = 56.0 bits (28), Expect = 2e-04 Identities = 41/44 (93%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 621 aggtgatagctgcaacccaatcgtgcagatattcttgatcctgc 664 |||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 20324 aggtgatagcagcaaca-aatcgtgcagatattcttgatcctgc 20366
>gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete sequence Length = 129197 Score = 87.7 bits (44), Expect = 4e-14 Identities = 125/152 (82%) Strand = Plus / Plus Query: 57 gttgaccctgacaacctcaagcctggtgatttggttggagtcaacaaggacagctacttg 116 |||||||||||||| || || ||||||||| | ||||| || ||||| || || ||||| Sbjct: 28994 gttgaccctgacaagctaaaacctggtgatcttgttggtgtaaacaaagatagttactta 29053 Query: 117 atattagacacgctaccttcagagtatgactctcgagtaaaggcaatggaggtagatgaa 176 || || || || || ||||| |||||||| |||||||| ||||| ||||| || |||||| Sbjct: 29054 atcttggatactctgccttctgagtatgattctcgagttaaggccatggaagttgatgaa 29113 Query: 177 aaacctacggaggattataatgacattggtgg 208 || || || ||||| || |||||||||||||| Sbjct: 29114 aagccaacagaggactacaatgacattggtgg 29145 Score = 67.9 bits (34), Expect = 4e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 530 cagtgaagttagtggtgacaggagaagtgcaacgaactatgttggagttgctgaatcagc 589 ||||||||| ||||| |||||| || || ||| |||| ||||| |||||||| ||||||| Sbjct: 30185 cagtgaagtgagtggggacagg-gaggttcaaagaaccatgttagagttgctcaatcagc 30243 Query: 590 tagatggatttagcagtgatga 611 | ||||| |||||||||||||| Sbjct: 30244 ttgatggttttagcagtgatga 30265 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 411 cagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggag 470 ||||||||||| || ||||| ||||| || ||||| ||||| || | || ||||| || Sbjct: 29898 cagatgttcataggagacggagcaaaacttgtccgtgatgctttccaactcgcaaaagaa 29957 Query: 471 aaggccccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttga 529 ||| | || ||||| || ||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 29958 aagtcaccatgcattatatttatagatgaaatcgatgcaattggtacaaagcgttttga 30016 Score = 56.0 bits (28), Expect = 2e-04 Identities = 41/44 (93%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 621 aggtgatagctgcaacccaatcgtgcagatattcttgatcctgc 664 |||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 30583 aggtgatagcagcaaca-aatcgtgcagatattcttgatcctgc 30625
>gb|AC000106.1|F7G19 Sequence of BAC F7G19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 110514 Score = 87.7 bits (44), Expect = 4e-14 Identities = 125/152 (82%) Strand = Plus / Plus Query: 228 gaacttgttgaagctatagtgttgccaatgacacacaaggagcaatttcagaagttggga 287 |||||||||||||| || |||||||||||||| || || ||||| || | |||||||| Sbjct: 5269 gaacttgttgaagccattgtgttgccaatgactcataaagagcagttcgaaaagttgggt 5328 Query: 288 atccgtcccccgaaaggagttcttctatatggaccacctgggacgggaaagacgttgatg 347 |||||||| || ||||| || || | ||||| || ||||| || ||||||||||||||| Sbjct: 5329 atccgtccaccaaaaggtgtactcttgtatggtcctcctggaaccggaaagacgttgatg 5388 Query: 348 gctcgtgcatgtgctgcacaaaccaatgcaac 379 || || || ||||| ||||| || |||||||| Sbjct: 5389 gcccgagcttgtgcagcacagacaaatgcaac 5420 Score = 60.0 bits (30), Expect = 1e-05 Identities = 90/110 (81%) Strand = Plus / Plus Query: 75 aagcctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctacct 134 |||||||| || || |||||||| ||||| || || |||||||| | || || ||||| Sbjct: 5018 aagcctggggacttagttggagttaacaaagatagttacttgattctggatactttacct 5077 Query: 135 tcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctac 184 || |||||||| || ||||||| ||||||||||| || ||||||||||| Sbjct: 5078 tctgagtatgattcaagagtaaaagcaatggaggtcgacgaaaaacctac 5127 Score = 52.0 bits (26), Expect = 0.002 Identities = 95/118 (80%) Strand = Plus / Plus Query: 412 agatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggaga 471 ||||||||||||| || || ||||| || ||||| ||||| || ||| ||||| |||| Sbjct: 5549 agatgttcatcggagatggagcaaaacttgtccgtgatgctttcctgcttgcaaaagaga 5608 Query: 472 aggccccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttga 529 | |||| || || || || || ||||||||||| ||||| || |||||||||||||| Sbjct: 5609 aatccccttgtattatattcatagatgagattgacgcaatagggacaaagcgttttga 5666
>dbj|AB044593.1| Brassica rapa BrTBP gene for Tat binding protein like protein, complete cds Length = 4780 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 75 aagcctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctacct 134 ||||||||||||||||||||||| || || ||||| ||||||||| | || || | || Sbjct: 2599 aagcctggtgatttggttggagtgaataaagacagttacttgatactggataccttgcca 2658 Query: 135 tcagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattat 194 || |||||||||||| | || || || |||||||| ||||| |||||||| || ||||| Sbjct: 2659 tccgagtatgactctagggttaaagccatggaggtcgatgagaaacctaccgaagattac 2718 Query: 195 aatgacattgg 205 ||||||||||| Sbjct: 2719 aatgacattgg 2729 Score = 60.0 bits (30), Expect = 1e-05 Identities = 99/122 (81%) Strand = Plus / Plus Query: 411 cagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggag 470 |||||||| || || ||||| ||||| || ||||| ||||| ||| | || || || ||| Sbjct: 3113 cagatgtttattggagacggagcaaaacttgtccgtgatgcttttcaactagcgaaagag 3172 Query: 471 aaggccccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttgac 530 || || || |||||||| || |||||||| || ||||| ||||| || |||||||||||| Sbjct: 3173 aaagctccatgcatcatcttcattgatgaaatcgatgccattggtaccaagcgttttgac 3232 Query: 531 ag 532 || Sbjct: 3233 ag 3234 Score = 54.0 bits (27), Expect = 6e-04 Identities = 70/83 (84%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 530 cagtgaagttagtggtgacaggagaagtgcaacgaactatgttggagttgctgaatcagc 589 ||||||||| ||||| |||||| |||||||| | |||||||||||| | || ||||||| Sbjct: 3303 cagtgaagtaagtggagacagg-gaagtgcagaggactatgttggagctacttaatcagc 3361 Query: 590 tagatggatttagcagtgatgag 612 | |||||||| || || |||||| Sbjct: 3362 ttgatggattcagtagcgatgag 3384
>gb|BC106920.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 3, mRNA (cDNA clone MGC:126066 IMAGE:40032717), complete cds Length = 1467 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 583 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 642 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 643 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 702 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 703 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 762 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 763 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 822 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 823 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 882 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 883 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 942 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 943 atgagttggatgccatcggcaccaagcgctttgacagtga 982
>ref|NM_001031190.1| Gallus gallus proteasome (prosome, macropain) 26S subunit, ATPase, 3 (PSMC3), mRNA Length = 2158 Score = 79.8 bits (40), Expect = 1e-11 Identities = 124/152 (81%) Strand = Plus / Plus Query: 348 gctcgtgcatgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagcta 407 ||||| ||||||||||| || ||||| || || || ||||||||||| ||||| || || Sbjct: 860 gctcgagcatgtgctgcccagaccaaggctacattcctgaaacttgcaggtccacaactt 919 Query: 408 gttcagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaag 467 || ||||||||||||||||| || || ||||| || |||||||| |||| | || ||| Sbjct: 920 gtgcagatgttcatcggtgatggagccaagctggtacgagatgcttttgctttagccaag 979 Query: 468 gagaaggccccctgcatcatttttattgatga 499 || ||||| || | |||||| ||||||||||| Sbjct: 980 gaaaaggctccttccatcatctttattgatga 1011
>gb|BT019725.1| Synthetic construct Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 3 mRNA, partial cds Length = 1215 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 392 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 451 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 452 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 511 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 512 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 571 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 572 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 631 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 632 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 691 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 692 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 751 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 752 atgagttggatgccatcggcaccaagcgctttgacagtga 791
>ref|NM_002804.3| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 3 (PSMC3), mRNA Length = 1583 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 656 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 715 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 716 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 775 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 776 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 835 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 836 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 895 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 896 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 955 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 956 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 1015 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 1016 atgagttggatgccatcggcaccaagcgctttgacagtga 1055
>gb|BC073165.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 3, mRNA (cDNA clone IMAGE:6195828), partial cds Length = 1549 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 636 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 695 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 696 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 755 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 756 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 815 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 816 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 875 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 876 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 935 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 936 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 995 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 996 atgagttggatgccatcggcaccaagcgctttgacagtga 1035
>gb|DQ226970.1| Boechera divaricarpa isolate AD-26SProt mRNA sequence Length = 501 Score = 79.8 bits (40), Expect = 1e-11 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 516 acaaagcgttttgacagtgaagttagtggtgacaggagaagtgcaacgaactatgttgga 575 ||||||||||||||||||||||| || || |||||| |||||||| ||||||||||||| Sbjct: 501 acaaagcgttttgacagtgaagtcagcggagacagg-gaagtgcagagaactatgttgga 443 Query: 576 gttgctgaatca 587 |||||| ||||| Sbjct: 442 gttgctcaatca 431
>gb|DQ226751.1| Boechera divaricarpa isolate SLW-A-E11 mRNA sequence Length = 501 Score = 79.8 bits (40), Expect = 1e-11 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 516 acaaagcgttttgacagtgaagttagtggtgacaggagaagtgcaacgaactatgttgga 575 ||||||||||||||||||||||| || || |||||| |||||||| ||||||||||||| Sbjct: 501 acaaagcgttttgacagtgaagtcagcggagacagg-gaagtgcagagaactatgttgga 443 Query: 576 gttgctgaatca 587 |||||| ||||| Sbjct: 442 gttgctcaatca 431
>gb|AC009606.4|ATAC009606 Arabidopsis thaliana chromosome III BAC F22F7 genomic sequence, complete sequence Length = 91924 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 78 cctggtgatttggttggagtcaacaaggacagctacttgatattagacacgctaccttca 137 |||||||| ||||||||||| ||||| || ||||||||||| || || || | || || Sbjct: 16354 cctggtgacttggttggagttaacaaagatagctacttgattttggataccttgccatcc 16295 Query: 138 gagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataat 197 |||||||||||| | || || || |||||||| ||||||||||| || || ||||| ||| Sbjct: 16294 gagtatgactctagggttaaagccatggaggtcgatgaaaaaccaactgaagattacaat 16235 Query: 198 gacattgg 205 |||||||| Sbjct: 16234 gacattgg 16227 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 411 cagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggag 470 ||||||||||| || ||||| |||||||| ||||| ||||||||| | || || || ||| Sbjct: 15764 cagatgttcattggagacggagcaaagcttgtccgtgatgcctttcaacttgccaaagag 15705 Query: 471 aaggccccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttgac 530 || || || ||||| || || || ||||| || ||||| ||||| ||||||||||| ||| Sbjct: 15704 aaagctccgtgcattatcttcatagatgaaatcgatgccattggtacaaagcgtttcgac 15645 Query: 531 ag 532 || Sbjct: 15644 ag 15643 Score = 46.1 bits (23), Expect = 0.15 Identities = 51/59 (86%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 529 acagtgaagttagtggtgacaggagaagtgcaacgaactatgttggagttgctgaatca 587 |||||||||| || || |||||| |||||||| | ||||||||||||||||| ||||| Sbjct: 15559 acagtgaagtcagcggagacagg-gaagtgcagaggactatgttggagttgctcaatca 15502
>gb|BC008713.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 3, mRNA (cDNA clone IMAGE:2822002), partial cds Length = 1582 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 655 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 714 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 715 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 774 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 775 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 834 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 835 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 894 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 895 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 954 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 955 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 1014 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 1015 atgagttggatgccatcggcaccaagcgctttgacagtga 1054
>emb|AJ720697.1| Gallus gallus mRNA for hypothetical protein, clone 23k2 Length = 2158 Score = 79.8 bits (40), Expect = 1e-11 Identities = 124/152 (81%) Strand = Plus / Plus Query: 348 gctcgtgcatgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagcta 407 ||||| ||||||||||| || ||||| || || || ||||||||||| ||||| || || Sbjct: 860 gctcgagcatgtgctgcccagaccaaggctacattcctgaaacttgcaggtccacaactt 919 Query: 408 gttcagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaag 467 || ||||||||||||||||| || || ||||| || |||||||| |||| | || ||| Sbjct: 920 gtgcagatgttcatcggtgatggagccaagctggtacgagatgcttttgctttagccaag 979 Query: 468 gagaaggccccctgcatcatttttattgatga 499 || ||||| || | |||||| ||||||||||| Sbjct: 980 gaaaaggctccttccatcatctttattgatga 1011
>emb|CR624756.1| full-length cDNA clone CS0DC028YG16 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1390 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 534 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 593 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 594 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 653 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 654 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 713 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 714 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 773 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 774 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 833 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 834 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 893 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 894 atgagttggatgccatcggcaccaagcgctttgacagtga 933
>emb|CR625636.1| full-length cDNA clone CS0DM010YJ14 of Fetal liver of Homo sapiens (human) Length = 1499 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 666 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 725 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 726 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 785 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 786 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 845 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 846 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 905 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 906 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 965 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 966 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 1025 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 1026 atgagttggatgccatcggcaccaagcgctttgacagtga 1065
>emb|CR621417.1| full-length cDNA clone CS0DC021YI09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1326 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 471 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 530 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 531 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 590 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 591 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 650 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 651 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 710 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 711 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 770 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 771 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 830 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 831 atgagttggatgccatcggcaccaagcgctttgacagtga 870
>emb|CR619701.1| full-length cDNA clone CS0DK011YL24 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1309 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 454 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 513 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 514 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 573 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 574 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 633 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 634 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 693 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 694 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 753 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 754 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 813 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 814 atgagttggatgccatcggcaccaagcgctttgacagtga 853
>emb|CR618622.1| full-length cDNA clone CS0DI015YE19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1297 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 448 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 507 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 508 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 567 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 568 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 627 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 628 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 687 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 688 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 747 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 748 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 807 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 808 atgagttggatgccatcggcaccaagcgctttgacagtga 847
>emb|CR608898.1| full-length cDNA clone CS0DK008YG21 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1247 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 424 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 483 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 484 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 543 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 544 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 603 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 604 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 663 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 664 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 723 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 724 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 783 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 784 atgagttggatgccatcggcaccaagcgctttgacagtga 823
>emb|CR608235.1| full-length cDNA clone CS0DC003YG22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1293 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 423 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 482 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 483 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 542 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 543 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 602 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 603 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 662 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 663 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 722 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 723 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 782 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 783 atgagttggatgccatcggcaccaagcgctttgacagtga 822
>emb|CR605143.1| full-length cDNA clone CS0DI032YG23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1272 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 456 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 515 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 516 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 575 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 576 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 635 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 636 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 695 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 696 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 755 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 756 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 815 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 816 atgagttggatgccatcggcaccaagcgctttgacagtga 855
>emb|CR602415.1| full-length cDNA clone CS0DE003YE13 of Placenta of Homo sapiens (human) Length = 1318 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 448 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 507 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 508 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 567 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 568 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 627 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 628 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 687 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 688 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 747 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 748 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 807 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 808 atgagttggatgccatcggcaccaagcgctttgacagtga 847
>emb|CR600512.1| full-length cDNA clone CS0DJ006YL20 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1309 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 454 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 513 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 514 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 573 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 574 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 633 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 634 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 693 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 694 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 753 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 754 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 813 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 814 atgagttggatgccatcggcaccaagcgctttgacagtga 853
>emb|CR599967.1| full-length cDNA clone CS0DC002YB17 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1530 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 658 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 717 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 718 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 777 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 778 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 837 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 838 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 897 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 898 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 957 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 958 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 1017 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 1018 atgagttggatgccatcggcaccaagcgctttgacagtga 1057
>emb|CR598917.1| full-length cDNA clone CS0DC025YP17 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1328 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 461 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 520 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 521 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 580 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 581 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 640 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 641 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 700 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 701 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 760 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 761 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 820 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 821 atgagttggatgccatcggcaccaagcgctttgacagtga 860
>emb|CR598777.1| full-length cDNA clone CS0DE005YD04 of Placenta of Homo sapiens (human) Length = 1271 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 448 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 507 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 508 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 567 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 568 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 627 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 628 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 687 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 688 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 747 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 748 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 807 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 808 atgagttggatgccatcggcaccaagcgctttgacagtga 847
>emb|CR597773.1| full-length cDNA clone CS0DI067YJ20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1274 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 445 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 504 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 505 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 564 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 565 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 624 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 625 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 684 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 685 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 744 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 745 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 804 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 805 atgagttggatgccatcggcaccaagcgctttgacagtga 844
>emb|CR591886.1| full-length cDNA clone CS0DC012YP23 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1475 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 633 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 692 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 693 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 752 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 753 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 812 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 813 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 872 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 873 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 932 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 933 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 992 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 993 atgagttggatgccatcggcaccaagcgctttgacagtga 1032
>emb|CR590340.1| full-length cDNA clone CS0DC017YM14 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1288 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 448 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 507 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 508 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 567 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 568 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 627 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 628 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 687 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 688 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 747 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 748 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 807 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 808 atgagttggatgccatcggcaccaagcgctttgacagtga 847
>emb|CR590202.1| full-length cDNA clone CS0DC012YF17 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1508 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 658 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 717 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 718 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 777 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 778 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 837 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 838 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 897 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 898 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 957 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 958 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 1017 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 1018 atgagttggatgccatcggcaccaagcgctttgacagtga 1057
>emb|CR456731.1| Homo sapiens full open reading frame cDNA clone RZPDo834C0311D for gene PSMC3, proteasome (prosome, macropain) 26S subunit, ATPase, 3; complete cds, incl. stopcodon Length = 1215 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 392 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 451 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 452 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 511 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 512 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 571 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 572 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 631 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 632 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 691 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 692 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 751 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 752 atgagttggatgccatcggcaccaagcgctttgacagtga 791
>emb|CR390353.1| Gallus gallus finished cDNA, clone ChEST947l20 Length = 950 Score = 79.8 bits (40), Expect = 1e-11 Identities = 124/152 (81%) Strand = Plus / Plus Query: 348 gctcgtgcatgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagcta 407 ||||| ||||||||||| || ||||| || || || ||||||||||| ||||| || || Sbjct: 663 gctcgagcatgtgctgcccagaccaaggctacattcctgaaacttgcaggtccacaactt 722 Query: 408 gttcagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaag 467 || ||||||||||||||||| || || ||||| || |||||||| |||| | || ||| Sbjct: 723 gtgcagatgttcatcggtgatggagccaagctggtacgagatgcttttgctttagccaag 782 Query: 468 gagaaggccccctgcatcatttttattgatga 499 || ||||| || | |||||| ||||||||||| Sbjct: 783 gaaaaggctccttccatcatctttattgatga 814
>dbj|AK222485.1| Homo sapiens mRNA for proteasome 26S ATPase subunit 3 variant, clone: adKA02547 Length = 1361 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 453 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 512 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 513 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 572 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 573 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 632 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 633 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 692 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 693 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 752 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 753 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 812 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 813 atgagttggatgccatcggcaccaagcgctttgacagtga 852
>gb|AY891323.1| Synthetic construct Homo sapiens clone FLH010314.01L proteasome 26S subunit 3 (PSMC3) mRNA, partial cds Length = 1215 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 392 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 451 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 452 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 511 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 512 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 571 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 572 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 631 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 632 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 691 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 692 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 751 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 752 atgagttggatgccatcggcaccaagcgctttgacagtga 791
>gb|BC107804.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 3, mRNA (cDNA clone IMAGE:4611035), partial cds Length = 1565 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 655 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 714 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 715 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 774 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 775 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 834 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 835 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 894 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 895 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 954 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 955 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 1014 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 1015 atgagttggatgccatcggcaccaagcgctttgacagtga 1054
>gb|M34079.1|HUMTBP1 Human immunodeficiency virus tat transactivator binding protein-1 (tbp-1) mRNA, complete cds Length = 1341 Score = 79.8 bits (40), Expect = 1e-11 Identities = 310/400 (77%) Strand = Plus / Plus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattata 195 ||||||||||||| || || ||||| ||||||||||| || | || |||||| | || | Sbjct: 454 cagagtatgactcgcgggtgaaggccatggaggtagacgagaggcccacggagcaataca 513 Query: 196 atgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaa 255 ||||||||| || |||| || |||| ||||| || || || || || || ||||||| Sbjct: 514 gtgacattgggggtttggacaagcagatccaggagctggtggaggccattgtcttgccaa 573 Query: 256 tgacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctat 315 ||| ||||||||| | ||| |||| ||||| |||| || || ||||| || || | | Sbjct: 574 tgaaccacaaggagaagtttgagaacttggggatccaacctccaaaaggggtgctgatgt 633 Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatg 375 |||| || || |||||||| ||||| | |||| || || ||||| ||||| || || | Sbjct: 634 atgggcccccagggacggggaagaccctcctggcccgggcctgtgccgcacagactaagg 693 Query: 376 caacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaa 435 | ||||| || || || ||||| || ||||| || ||||||||||| || || || || | Sbjct: 694 ccaccttcctaaagctggctggcccccagctggtgcagatgttcattggagatggtgcca 753 Query: 436 agctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattg 495 |||| ||||| |||||||||| ||||| |||||||| || |||| ||||| || |||| Sbjct: 754 agctagtccgggatgcctttgccctggccaaggagaaagcgccctctatcatcttcattg 813 Query: 496 atgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||| | ||||| || || || ||||| ||||||||||| Sbjct: 814 atgagttggatgccatcggcaccaagcgctttgacagtga 853
>ref|NM_001002064.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 3 (psmc3), mRNA Length = 1657 Score = 75.8 bits (38), Expect = 2e-10 Identities = 308/398 (77%) Strand = Plus / Plus Query: 138 gagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataat 197 |||||||||||||| || || |||||||| || ||||| | ||||| ||| | || | | Sbjct: 558 gagtatgactctcgtgtgaaagcaatggaagtggatgagaggcctacagagcagtacagt 617 Query: 198 gacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaatg 257 ||||| |||||||| || ||| | ||||| || || || || || ||||| |||| ||| Sbjct: 618 gacatcggtggccttgacaaacaaattcaagagctggtggaggcgatagttctgcccatg 677 Query: 258 acacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctatat 317 | ||||| ||| ||||| |||| |||| |||| || || || ||||||||| | || Sbjct: 678 aaccacaaagagaaatttgagaatctgggcatccagccaccaaagggagttcttatgtac 737 Query: 318 ggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgca 377 |||||||| || || |||||||| || |||| | || ||||| || |||||||| ||| Sbjct: 738 ggaccaccaggcacaggaaagaccctgctggccagagcctgtgcagcccaaaccaaggca 797 Query: 378 acctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaag 437 |||||| |||| | ||||| || || || || |||||||| || ||||| || || || Sbjct: 798 acctttttgaagttggctggccctcaactggtccagatgtttattggtgatggtgccaaa 857 Query: 438 ctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgat 497 | || || ||||| |||| |||| ||||||||||| |||| |||||| || |||||| Sbjct: 858 ttggtgcgggatgcatttgctttggctaaggagaaggctccctccatcatcttcattgat 917 Query: 498 gagattgatgcaattggaacaaagcgttttgacagtga 535 ||| | ||||| ||||| || ||||| ||||||||||| Sbjct: 918 gagttggatgctattggcaccaagcgctttgacagtga 955
>gb|BC071390.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 3, mRNA (cDNA clone MGC:86713 IMAGE:6896890), complete cds Length = 1657 Score = 75.8 bits (38), Expect = 2e-10 Identities = 308/398 (77%) Strand = Plus / Plus Query: 138 gagtatgactctcgagtaaaggcaatggaggtagatgaaaaacctacggaggattataat 197 |||||||||||||| || || |||||||| || ||||| | ||||| ||| | || | | Sbjct: 558 gagtatgactctcgtgtgaaagcaatggaagtggatgagaggcctacagagcagtacagt 617 Query: 198 gacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaatg 257 ||||| |||||||| || ||| | ||||| || || || || || ||||| |||| ||| Sbjct: 618 gacatcggtggccttgacaaacaaattcaagagctggtggaggcgatagttctgcccatg 677 Query: 258 acacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctatat 317 | ||||| ||| ||||| |||| |||| |||| || || || ||||||||| | || Sbjct: 678 aaccacaaagagaaatttgagaatctgggcatccagccaccaaagggagttcttatgtac 737 Query: 318 ggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgca 377 |||||||| || || |||||||| || |||| | || ||||| || |||||||| ||| Sbjct: 738 ggaccaccaggcacaggaaagaccctgctggccagagcctgtgcagcccaaaccaaggca 797 Query: 378 acctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaag 437 |||||| |||| | ||||| || || || || |||||||| || ||||| || || || Sbjct: 798 acctttttgaagttggctggccctcaactggtccagatgtttattggtgatggtgccaaa 857 Query: 438 ctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgat 497 | || || ||||| |||| |||| ||||||||||| |||| |||||| || |||||| Sbjct: 858 ttggtgcgggatgcatttgctttggctaaggagaaggctccctccatcatcttcattgat 917 Query: 498 gagattgatgcaattggaacaaagcgttttgacagtga 535 ||| | ||||| ||||| || ||||| ||||||||||| Sbjct: 918 gagttggatgctattggcaccaagcgctttgacagtga 955
>ref|XM_508413.1| PREDICTED: Pan troglodytes similar to PSMC3 protein (LOC451172), mRNA Length = 2865 Score = 69.9 bits (35), Expect = 1e-08 Identities = 116/143 (81%) Strand = Plus / Plus Query: 393 gctggtccgcagctagttcagatgttcatcggtgacggggcaaagctcgtccgagatgcc 452 ||||| || ||||| || ||||||||||| || || || || ||||| ||||| |||||| Sbjct: 2299 gctggcccccagctggtgcagatgttcattggagatggtgccaagctagtccgggatgcc 2358 Query: 453 tttgagctggcaaaggagaaggccccctgcatcatttttattgatgagattgatgcaatt 512 |||| ||||| |||||||| || |||| ||||| || ||||||||| | ||||| || Sbjct: 2359 tttgccctggccaaggagaaagcgccctctatcatcttcattgatgagttggatgccatc 2418 Query: 513 ggaacaaagcgttttgacagtga 535 || || ||||| ||||||||||| Sbjct: 2419 ggcaccaagcgctttgacagtga 2441
>gb|BC054164.1| Xenopus laevis proteasome (prosome, macropain) 26S subunit, ATPase 3, mRNA (cDNA clone MGC:64280 IMAGE:6873792), complete cds Length = 1454 Score = 69.9 bits (35), Expect = 1e-08 Identities = 263/339 (77%) Strand = Plus / Plus Query: 197 tgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaat 256 |||||| || || ||||| ||| |||| ||||| |||||||| || || || |||| || Sbjct: 576 tgacataggaggtctggataaacagatccaggagcttgttgaggccattgtactgcccat 635 Query: 257 gacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctata 316 || |||||||| | ||| |||| || ||||| | ||||| ||||| |||||| | || Sbjct: 636 gaaccacaaggaaaagtttgagaatttaggaattcagccccctaaaggtgttcttatgta 695 Query: 317 tggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgc 376 || || ||||| || || ||||| || ||||| | |||||||| || || || || || Sbjct: 696 cggcccccctggaactgggaagaccctgctggctagagcatgtgcagctcagactaaggc 755 Query: 377 aacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaa 436 ||||||||||| ||||| || || |||||||| |||||||| || || ||||| || || Sbjct: 756 tacctttctgaagcttgccggcccacagctagtgcagatgtttattggagacggtgccaa 815 Query: 437 gctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattga 496 || || |||||||| || | ||||| |||||||| || || | |||||||| ||||| Sbjct: 816 actggtgcgagatgctttcgctctggccaaggagaaagcaccttctatcattttcattga 875 Query: 497 tgagattgatgcaattggaacaaagcgttttgacagtga 535 ||| ||||||| ||||| ||||| | ||||||||||| Sbjct: 876 tgaacttgatgctattggcacaaaaagatttgacagtga 914
>emb|Y10461.1|XLTBP6 X.laevis TBP6 mRNA Length = 3496 Score = 69.9 bits (35), Expect = 1e-08 Identities = 263/339 (77%) Strand = Plus / Plus Query: 197 tgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaat 256 |||||| || || ||||| ||| |||| ||||| |||||||| || || || |||| || Sbjct: 560 tgacataggaggtctggataaacagatccaggagcttgttgaggccattgtactgcccat 619 Query: 257 gacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctata 316 || |||||||| | ||| |||| || ||||| | ||||| ||||| |||||| | || Sbjct: 620 gaaccacaaggaaaagtttgagaatttaggaattcagccccctaaaggtgttcttatgta 679 Query: 317 tggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgc 376 || || ||||| || || ||||| || ||||| | |||||||| || || || || || Sbjct: 680 cggcccccctggaactgggaagaccctgctggctagagcatgtgcagctcagactaaggc 739 Query: 377 aacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaa 436 ||||||||||| ||||| || || |||||||| |||||||| || || ||||| || || Sbjct: 740 tacctttctgaagcttgccggcccacagctagtgcagatgtttattggagacggtgccaa 799 Query: 437 gctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattga 496 || || |||||||| || | ||||| |||||||| || || | |||||||| ||||| Sbjct: 800 actggtgcgagatgctttcgctctggccaaggagaaagcaccttctatcattttcattga 859 Query: 497 tgagattgatgcaattggaacaaagcgttttgacagtga 535 ||| ||||||| ||||| ||||| | ||||||||||| Sbjct: 860 tgaacttgatgctattggcacaaaaagatttgacagtga 898
>ref|XM_471556.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 447 gatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgatgagattgat 506 ||||||||| |||| || || ||||| ||||| ||||| ||||| |||||||| |||||| Sbjct: 592 gatgcctttcagcttgctaaagagaaagccccatgcattattttcattgatgaaattgat 651 Query: 507 gcaattggaa 516 |||||||||| Sbjct: 652 gcaattggaa 661
>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05, complete sequence Length = 185211 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 447 gatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgatgagattgat 506 ||||||||| |||| || || ||||| ||||| ||||| ||||| |||||||| |||||| Sbjct: 132266 gatgcctttcagcttgctaaagagaaagccccatgcattattttcattgatgaaattgat 132207 Query: 507 gcaattggaa 516 |||||||||| Sbjct: 132206 gcaattggaa 132197
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 447 gatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgatgagattgat 506 ||||||||| |||| || || ||||| ||||| ||||| ||||| |||||||| |||||| Sbjct: 12307382 gatgcctttcagcttgctaaagagaaagccccatgcattattttcattgatgaaattgat 12307323 Query: 507 gcaattggaa 516 |||||||||| Sbjct: 12307322 gcaattggaa 12307313
>dbj|AK071386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092N19, full insert sequence Length = 1482 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 447 gatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgatgagattgat 506 ||||||||| |||| || || ||||| ||||| ||||| ||||| |||||||| |||||| Sbjct: 715 gatgcctttcagcttgctaaagagaaagccccatgcattattttcattgatgaaattgat 774 Query: 507 gcaattggaa 516 |||||||||| Sbjct: 775 gcaattggaa 784
>dbj|AK173395.1| Ciona intestinalis cDNA, clone:cilv028p09, full insert sequence Length = 2192 Score = 63.9 bits (32), Expect = 6e-07 Identities = 122/152 (80%) Strand = Plus / Plus Query: 318 ggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgca 377 ||||| |||||||||||||| || || |||| ||||| |||||||| ||||| || | Sbjct: 1372 ggacctcctgggacgggaaaaacattattggcgcgtgcgtgtgctgctcaaacgaagtcg 1431 Query: 378 acctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaag 437 ||||| ||||| | |||||||| ||| | || ||||||||||| || ||||| |||||| Sbjct: 1432 accttcctgaagttagctggtccccagttggtccagatgttcattggggacggagcaaag 1491 Query: 438 ctcgtccgagatgcctttgagctggcaaagga 469 | || ||||| ||||| | |||||| ||||| Sbjct: 1492 ttggtacgagacgccttcgcgctggccaagga 1523
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 477 ccctgcatcatttttattgatgagattgatgcaattggaa 516 ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 899795 ccctgcatcatttttatagatgaaattgatgcaattggaa 899756
>ref|NM_111819.3| Arabidopsis thaliana CDC48 (CELL DIVISION CYCLE 48); ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G09840 (CDC48) mRNA, complete cds Length = 2797 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 297 ccgaaaggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgc 355 ||||| ||| ||||||| ||||||||||||||| | |||||||| ||||| |||||||| Sbjct: 875 ccgaagggaattcttctttatggaccacctgggtctggaaagactttgatcgctcgtgc 933
>gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BAC F8A24 genomic sequence, complete sequence Length = 72902 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 297 ccgaaaggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgc 355 ||||| ||| ||||||| ||||||||||||||| | |||||||| ||||| |||||||| Sbjct: 45944 ccgaagggaattcttctttatggaccacctgggtctggaaagactttgatcgctcgtgc 45886
>gb|BC046948.1| Xenopus laevis hypothetical protein MGC53343, mRNA (cDNA clone MGC:53343 IMAGE:5570999), complete cds Length = 3107 Score = 61.9 bits (31), Expect = 2e-06 Identities = 214/275 (77%) Strand = Plus / Plus Query: 261 cacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctatatgga 320 ||||||||| | ||| |||| || ||||||| ||||| ||||| || ||| | || || Sbjct: 797 cacaaggagaagtttgagaacttaggaatccagccccctaaaggtgtccttatgtacggc 856 Query: 321 ccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgcaacc 380 || ||||| || |||||||| || ||||| | |||||||| || || || || |||||| Sbjct: 857 ccccctggaactggaaagactctgctggctagggcatgtgcagcgcagactaaggcaacc 916 Query: 381 tttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaagctc 440 |||||||| || ||||| || ||||| || |||||||| || || ||||| || || || Sbjct: 917 tttctgaagctggctggcccacagctggtacagatgtttattggagacggtgccaaactt 976 Query: 441 gtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattgatgag 500 || |||||||| || || || |||||||| || || | |||||||| |||||||| Sbjct: 977 gtgcgagatgctttctctctagccaaggagaaagcaccttctatcattttcattgatgaa 1036 Query: 501 attgatgcaattggaacaaagcgttttgacagtga 535 ||||||| ||||| ||||| | ||||||||||| Sbjct: 1037 cttgatgctattggcacaaaaaggtttgacagtga 1071
>gb|AY094434.1| Arabidopsis thaliana AT3g09840/F8A24_11 mRNA, complete cds Length = 2628 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 297 ccgaaaggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgc 355 ||||| ||| ||||||| ||||||||||||||| | |||||||| ||||| |||||||| Sbjct: 831 ccgaagggaattcttctttatggaccacctgggtctggaaagactttgatcgctcgtgc 889
>gb|AY065076.1| Arabidopsis thaliana putative transitional endoplasmic reticulum ATPase (F8A24.11) mRNA, complete cds Length = 2730 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 297 ccgaaaggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgc 355 ||||| ||| ||||||| ||||||||||||||| | |||||||| ||||| |||||||| Sbjct: 865 ccgaagggaattcttctttatggaccacctgggtctggaaagactttgatcgctcgtgc 923
>gb|U37587.1|ATU37587 Arabidopsis thaliana cell division cycle protein (CDC48) mRNA, complete cds Length = 2638 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 297 ccgaaaggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgc 355 ||||| ||| ||||||| ||||||||||||||| | |||||||| ||||| |||||||| Sbjct: 814 ccgaagggaattcttctttatggaccacctgggtctggaaagactttgatcgctcgtgc 872
>gb|BC075596.1| Xenopus tropicalis proteasome (prosome, macropain) 26S subunit, ATPase, 3, mRNA (cDNA clone MGC:89608 IMAGE:6995179), complete cds Length = 1468 Score = 60.0 bits (30), Expect = 1e-05 Identities = 246/318 (77%) Strand = Plus / Plus Query: 197 tgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaat 256 |||||| ||||| ||||| ||| |||| ||||| ||||| || || || || |||| || Sbjct: 585 tgacataggtggtctggataaacagatccaggagcttgtggaggccattgtactgcccat 644 Query: 257 gacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctata 316 || |||||||| | ||| |||| |||||||||| ||||| ||||| || ||| | || Sbjct: 645 gaaccacaaggaaaagtttgagaacttgggaatccagccccctaaaggtgtccttatgta 704 Query: 317 tggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgc 376 || || ||||| || || ||||| || ||||| | ||||| || || || || || || Sbjct: 705 cggcccccctggaactggcaagaccctgctggctagggcatgcgccgctcagacaaaggc 764 Query: 377 aacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaa 436 ||||||||||| ||||| || || ||||||||||||||||| || || || || || || Sbjct: 765 tacctttctgaagcttgccggcccacagctagttcagatgtttattggagatggtgccaa 824 Query: 437 gctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattga 496 ||||| |||||||| || | ||||| ||||| || || || | |||||||| ||||| Sbjct: 825 actcgtacgagatgctttcgctctggccaaggaaaaagcaccttctatcattttcattga 884 Query: 497 tgagattgatgcaattgg 514 ||| ||||||| ||||| Sbjct: 885 tgaacttgatgctattgg 902
>gb|DQ213632.1| Taeniopygia guttata clone 0058P0031F04 proteasome 26S ATPase subunit 3-like mRNA, complete sequence Length = 730 Score = 60.0 bits (30), Expect = 1e-05 Identities = 117/146 (80%) Strand = Plus / Plus Query: 354 gcatgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcag 413 ||||||||||| || ||||| || || || ||||| || || |||||||| || || ||| Sbjct: 2 gcatgtgctgcccagaccaaggccacgttcctgaagctggcgggtccgcaacttgtgcag 61 Query: 414 atgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaag 473 |||||||| || || || |||||||| || || ||||| |||| || |||||||| || Sbjct: 62 atgttcattggcgatggagcaaagctggtacgcgatgcttttgctcttgcaaaggaaaaa 121 Query: 474 gccccctgcatcatttttattgatga 499 || || | |||||| ||||||||||| Sbjct: 122 gctccttccatcatctttattgatga 147
>gb|DQ213631.1| Taeniopygia guttata clone 0058P0048B04 proteasome 26S ATPase subunit 3-like mRNA, complete sequence Length = 732 Score = 60.0 bits (30), Expect = 1e-05 Identities = 117/146 (80%) Strand = Plus / Plus Query: 354 gcatgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcag 413 ||||||||||| || ||||| || || || ||||| || || |||||||| || || ||| Sbjct: 5 gcatgtgctgcccagaccaaggccacgttcctgaagctggcgggtccgcaacttgtgcag 64 Query: 414 atgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaag 473 |||||||| || || || |||||||| || || ||||| |||| || |||||||| || Sbjct: 65 atgttcattggcgatggagcaaagctggtacgcgatgcttttgctcttgcaaaggaaaaa 124 Query: 474 gccccctgcatcatttttattgatga 499 || || | |||||| ||||||||||| Sbjct: 125 gctccttccatcatctttattgatga 150
>ref|NM_001006785.1| Xenopus tropicalis proteasome (prosome, macropain) 26S subunit, ATPase, 3 (psmc3), mRNA Length = 1468 Score = 60.0 bits (30), Expect = 1e-05 Identities = 246/318 (77%) Strand = Plus / Plus Query: 197 tgacattggtggcctggagaaagagattcaggaacttgttgaagctatagtgttgccaat 256 |||||| ||||| ||||| ||| |||| ||||| ||||| || || || || |||| || Sbjct: 585 tgacataggtggtctggataaacagatccaggagcttgtggaggccattgtactgcccat 644 Query: 257 gacacacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctata 316 || |||||||| | ||| |||| |||||||||| ||||| ||||| || ||| | || Sbjct: 645 gaaccacaaggaaaagtttgagaacttgggaatccagccccctaaaggtgtccttatgta 704 Query: 317 tggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgc 376 || || ||||| || || ||||| || ||||| | ||||| || || || || || || Sbjct: 705 cggcccccctggaactggcaagaccctgctggctagggcatgcgccgctcagacaaaggc 764 Query: 377 aacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaa 436 ||||||||||| ||||| || || ||||||||||||||||| || || || || || || Sbjct: 765 tacctttctgaagcttgccggcccacagctagttcagatgtttattggagatggtgccaa 824 Query: 437 gctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatttttattga 496 ||||| |||||||| || | ||||| ||||| || || || | |||||||| ||||| Sbjct: 825 actcgtacgagatgctttcgctctggccaaggaaaaagcaccttctatcattttcattga 884 Query: 497 tgagattgatgcaattgg 514 ||| ||||||| ||||| Sbjct: 885 tgaacttgatgctattgg 902
>gb|AY108940.1| Zea mays PCO101909 mRNA sequence Length = 961 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 563 gaactatgttggagttgctgaatcagctagatgg 596 |||||||||||||| ||||||||||||||||||| Sbjct: 319 gaactatgttggagctgctgaatcagctagatgg 352
>gb|AY105631.1| Zea mays PCO101908 mRNA sequence Length = 1272 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 563 gaactatgttggagttgctgaatcagctagatgg 596 |||||||||||||| ||||||||||||||||||| Sbjct: 588 gaactatgttggagctgctgaatcagctagatgg 621 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattggaacaaag 521 ||||||||||||||||| || ||||||||||| Sbjct: 515 tttattgatgagattgacgctgttggaacaaag 547
>ref|XM_656748.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4236.2), mRNA Length = 1398 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 357 tgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatg 416 ||||| ||| |||| || |||||||| || ||||| || || || ||||| || || ||| Sbjct: 793 tgtgcagcagaaactaacgcaaccttcctaaaactcgccggcccccagctcgtgcaaatg 852 Query: 417 ttcatcggtgacggggcaaagctcgtccg 445 |||||||||||||| || ||||||||||| Sbjct: 853 ttcatcggtgacggcgcgaagctcgtccg 881
>gb|BC054287.1| Xenopus laevis protease (prosome, macropain) 26S subunit, ATPase 1, mRNA (cDNA clone MGC:64535 IMAGE:6878698), complete cds Length = 1595 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattggaacaaag 521 |||||||||||||||||||||||||| |||||| Sbjct: 878 tttattgatgagattgatgcaattggtacaaag 910
>gb|AC084559.1|CBRG35L02 Caenorhabditis briggsae cosmid G35L02, complete sequence Length = 42112 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 300 aaaggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgca 356 |||||||| ||||| || ||||||||||| || |||||||||||| |||| |||||| Sbjct: 38955 aaaggagtgcttctctacggaccacctggaactggaaagacgttgttggcacgtgca 38899 Score = 40.1 bits (20), Expect = 9.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 553 gaagtgcaacgaactatgttggagttgctgaatcag 588 |||||||| |||| |||||||||||||| |||||| Sbjct: 38495 gaagtgcagagaacaatgttggagttgctcaatcag 38460
>emb|CT032307.1| Platynereis dumerilii EST IB0AAA41AA12EM1 Length = 921 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 492 attgatgagattgatgcaattggaacaaagcgttttgacagtgaa 536 ||||||||| | ||||| ||||||||||| ||||||||||||||| Sbjct: 854 attgatgagttagatgctattggaacaaaacgttttgacagtgaa 898
>gb|BT025458.1| Bos taurus proteasome (prosome, macropain) 26S subunit, ATPase, 3 (PSMC3), mRNA, incomplete 5' cds Length = 1337 Score = 56.0 bits (28), Expect = 2e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 357 tgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatg 416 |||||||| || ||||| || ||||| ||||| || || || || ||||| || |||||| Sbjct: 687 tgtgctgcgcagaccaaggccaccttcctgaagctggccggcccccagctggtgcagatg 746 Query: 417 ttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaa 472 ||||| || || || || ||||| ||||| || ||||||| |||||| |||||||| Sbjct: 747 ttcattggggatggtgccaagctagtccgggacgcctttgcgctggccaaggagaa 802
>ref|XM_585224.2| PREDICTED: Bos taurus similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Proteasome subunit P50) (LOC508448), mRNA Length = 1857 Score = 56.0 bits (28), Expect = 2e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 357 tgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatg 416 |||||||| || ||||| || ||||| ||||| || || || || ||||| || |||||| Sbjct: 907 tgtgctgcgcagaccaaggccaccttcctgaagctggccggcccccagctggtgcagatg 966 Query: 417 ttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaa 472 ||||| || || || || ||||| ||||| || ||||||| |||||| |||||||| Sbjct: 967 ttcattggggatggtgccaagctagtccgggacgcctttgcgctggccaaggagaa 1022
>ref|XM_540960.2| PREDICTED: Canis familiaris similar to spermatogenesis associated factor SPAF (LOC483840), mRNA Length = 2682 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 297 ccgaaaggagttcttctatatggaccacctgg 328 ||||||||||||||||| |||||||||||||| Sbjct: 1981 ccgaaaggagttcttctgtatggaccacctgg 2012
>emb|AL031798.1|SPCC576 S.pombe chromosome III cosmid c576 Length = 35566 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 486 atttttattgatgagattgatgcaattggaacaaagcgttttga 529 |||||||||||||| |||||||| |||| |||||||||||||| Sbjct: 17989 atttttattgatgaaattgatgctattgctacaaagcgttttga 17946
>gb|AC090559.7| Homo sapiens chromosome 11, clone RP11-750H9, complete sequence Length = 202539 Score = 56.0 bits (28), Expect = 2e-04 Identities = 88/108 (81%) Strand = Plus / Minus Query: 393 gctggtccgcagctagttcagatgttcatcggtgacggggcaaagctcgtccgagatgcc 452 ||||| || ||||| || ||||||||||| || || || || ||||| ||||| |||||| Sbjct: 47176 gctggcccccagctggtgcagatgttcattggagatggtgccaagctagtccgggatgcc 47117 Query: 453 tttgagctggcaaaggagaaggccccctgcatcatttttattgatgag 500 |||| ||||| |||||||| || |||| ||||| || ||||||||| Sbjct: 47116 tttgccctggccaaggagaaagcgccctctatcatcttcattgatgag 47069 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 136 cagagtatgactctcgagtaaaggcaatggaggtaga 172 ||||||||||||| || || ||||| ||||||||||| Sbjct: 48612 cagagtatgactcgcgggtgaaggccatggaggtaga 48576
>gb|BC103063.1| Bos taurus cDNA clone IMAGE:7987582, partial cds Length = 1349 Score = 56.0 bits (28), Expect = 2e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 357 tgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatg 416 |||||||| || ||||| || ||||| ||||| || || || || ||||| || |||||| Sbjct: 690 tgtgctgcgcagaccaaggccaccttcctgaagctggccggcccccagctggtgcagatg 749 Query: 417 ttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaa 472 ||||| || || || || ||||| ||||| || ||||||| |||||| |||||||| Sbjct: 750 ttcattggggatggtgccaagctagtccgggacgcctttgcgctggccaaggagaa 805
>ref|NM_001023428.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC576.10c), partial mRNA Length = 1170 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 486 atttttattgatgagattgatgcaattggaacaaagcgttttga 529 |||||||||||||| |||||||| |||| |||||||||||||| Sbjct: 691 atttttattgatgaaattgatgctattgctacaaagcgttttga 734
>ref|XM_633525.1| Dictyostelium discoideum hypothetical protein (DDB0186002), partial mRNA Length = 1266 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 171 gatgaaaaacctacggaggattataatgacattggtggcctggagaaagagattcaggaa 230 ||||||||||| || ||||| |||| ||| |||||||| | || ||| | ||||| ||| Sbjct: 478 gatgaaaaaccaacagaggaatatagtgatattggtggattagataaacaaattcaagaa 537 Query: 231 cttgttgaagctatagtgttgccaatgacacacaa 265 | |||||||| ||||||| |||||||||||||| Sbjct: 538 ttagttgaagcagtagtgttaccaatgacacacaa 572 Score = 46.1 bits (23), Expect = 0.15 Identities = 81/99 (81%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattggaacaaagcgttttgacagtgaagttagtggtgac 548 ||||||||||| | ||||| ||||| || || ||||| || ||||| ||||||||||| Sbjct: 796 tttattgatgaactcgatgctattggtaccaaacgtttcgatagtgaggttagtggtgat 855 Query: 549 aggagaagtgcaacgaactatgttggagttgctgaatca 587 | |||| |||||||| || ||||| ||||| || ||||| Sbjct: 856 a-gagaggtgcaacgtacaatgttagagttactcaatca 893
>ref|XM_755601.1| Ustilago maydis 521 hypothetical protein (UM04547.1) partial mRNA Length = 603 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 411 cagatgttcatcggtgacggggcaaagctcgtccgagatgcctttga 457 |||||||||||||||||||| || |||||||| || ||||| ||||| Sbjct: 55 cagatgttcatcggtgacggtgccaagctcgtacgcgatgcgtttga 101
>ref|XM_643135.1| Entamoeba histolytica HM-1:IMSS 26s protease regulatory subunit (507.t00004) partial mRNA Length = 864 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 300 aaaggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgcatgt 359 |||||||||||| ||||||||||||| || || ||||| || || ||||| | |||||| Sbjct: 517 aaaggagttcttttatatggaccaccaggaacaggaaaaacattaatggcaagagcatgt 576 Query: 360 gctgcacaaac 370 || |||||||| Sbjct: 577 gcagcacaaac 587 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 486 atttttattgatgagattgatgcaattggaacaaa 520 |||||||||||||| || ||||||||||| ||||| Sbjct: 703 atttttattgatgaaatagatgcaattggtacaaa 737
>ref|XM_644083.1| Entamoeba histolytica HM-1:IMSS 26S protease regulatory subunit (335.t00007) partial mRNA Length = 1269 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 300 aaaggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgcatgt 359 |||||||||||| ||||||||||||| || || ||||| || || ||||| | |||||| Sbjct: 610 aaaggagttcttttatatggaccaccaggaacaggaaaaacattaatggcaagagcatgt 669 Query: 360 gctgcacaaac 370 || |||||||| Sbjct: 670 gcagcacaaac 680 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 486 atttttattgatgagattgatgcaattggaacaaa 520 |||||||||||||| || ||||||||||| ||||| Sbjct: 796 atttttattgatgaaatagatgcaattggtacaaa 830
>ref|XM_652007.1| Entamoeba histolytica HM-1:IMSS 26S protease regulatory subunit (4.t00010) partial mRNA Length = 1269 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 300 aaaggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgcatgt 359 |||||||||||| ||||||||||||| || || ||||| || || ||||| | |||||| Sbjct: 610 aaaggagttcttttatatggaccaccaggaacaggaaaaacattaatggcaagagcatgt 669 Query: 360 gctgcacaaac 370 || |||||||| Sbjct: 670 gcagcacaaac 680 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 486 atttttattgatgagattgatgcaattggaacaaa 520 |||||||||||||| || ||||||||||| ||||| Sbjct: 796 atttttattgatgaaatagatgcaattggtacaaa 830
>emb|Y10460.1|XLTBP10 X.laevis TBP10 mRNA Length = 1372 Score = 54.0 bits (27), Expect = 6e-04 Identities = 150/191 (78%) Strand = Plus / Plus Query: 261 cacaaggagcaatttcagaagttgggaatccgtcccccgaaaggagttcttctatatgga 320 ||||||||| | ||| |||| || ||||||| ||||| ||||| || ||| | || || Sbjct: 568 cacaaggagaagtttgagaacttaggaatccagccccctaaaggtgtccttatgtacggc 627 Query: 321 ccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaatgcaacc 380 || ||||| || |||||||| || ||||| | |||||||| || || || || |||||| Sbjct: 628 ccccctggaactggaaagactctgctggctagggcatgtgcagcgcagactaaggcaacc 687 Query: 381 tttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaagctc 440 |||||||| || ||||| || ||||| || |||||||| || || ||||| || || || Sbjct: 688 tttctgaagctggctggcccacagctggtacagatgtttattggagacggtgccaaactt 747 Query: 441 gtccgagatgc 451 || |||||||| Sbjct: 748 gtgcgagatgc 758
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 474 gccccctgcatcatttttattgatgagattgatgc 508 |||||||| ||| |||||||||||||||||||||| Sbjct: 111984 gccccctgtatcgtttttattgatgagattgatgc 111950 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tttattgatgagattgatgc 508 |||||||||||||||||||| Sbjct: 1915036 tttattgatgagattgatgc 1915017
>gb|U43398.1|STU43398 Solanum tuberosum POTATP1 mRNA, complete cds Length = 1473 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 483 atcatttttattgatgagattgatgcaattg 513 |||||||||||||||||| |||||||||||| Sbjct: 788 atcatttttattgatgaggttgatgcaattg 818
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 52.0 bits (26), Expect = 0.002 Identities = 84/102 (82%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 483 atcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaagttagt 542 ||||||||||| || ||| | ||||| |||||||||||| | |||||||| || ||| Sbjct: 451121 atcatttttatcgacgagttggatgcgattggaacaaagaggtttgacagcgataaaagt 451180 Query: 543 ggtgacaggagaagtgcaacgaactatgttggagttgctgaa 584 ||||||||| |||||||| | || |||||||||||| |||| Sbjct: 451181 ggtgacagg-gaagtgcagaggacaatgttggagttgttgaa 451221
>ref|XM_568336.1| Cryptococcus neoformans var. neoformans JEC21 endopeptidase (CNM01550) partial mRNA Length = 1487 Score = 52.0 bits (26), Expect = 0.002 Identities = 84/102 (82%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 483 atcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaagttagt 542 ||||||||||| || ||| | ||||| |||||||||||| | |||||||| || ||| Sbjct: 950 atcatttttatcgacgagttggatgcgattggaacaaagaggtttgacagcgataaaagt 1009 Query: 543 ggtgacaggagaagtgcaacgaactatgttggagttgctgaa 584 ||||||||| |||||||| | || |||||||||||| |||| Sbjct: 1010 ggtgacagg-gaagtgcagaggacaatgttggagttgttgaa 1050
>gb|AC135467.15| Medicago truncatula clone mth2-34h12, complete sequence Length = 114945 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 489 tttattgatgagattgatgcaattgg 514 |||||||||||||||||||||||||| Sbjct: 102545 tttattgatgagattgatgcaattgg 102520
>emb|BX571658.1| Wolinella succinogenes, complete genome; segment 2/7 Length = 346792 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 483 atcatttttattgatgagattgatgc 508 |||||||||||||||||||||||||| Sbjct: 258737 atcatttttattgatgagattgatgc 258762
>ref|XM_628150.1| Cryptosporidium parvum Iowa II predicted AFG1 ATpase family AAA ATpase (cgd1_3360), partial mRNA Length = 2160 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 487 tttttattgatgagattgatgcaattggaacaaagcgt 524 ||||||||||||| ||||||||| |||||| ||||||| Sbjct: 1064 tttttattgatgaaattgatgcagttggaagaaagcgt 1101
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 52.0 bits (26), Expect = 0.002 Identities = 128/162 (79%) Strand = Plus / Plus Query: 369 accaatgcaacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgac 428 |||||||| || ||| |||| || || | ||||||| | || ||||||||||| ||||| Sbjct: 1107270 accaatgcgacttttttgaagctggccgctccgcagttggtccagatgttcataggtgaa 1107329 Query: 429 ggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatt 488 || || ||||| ||||| || ||||||| |||| ||||| ||||| || ||| || Sbjct: 1107330 ggtgcgaagctggtccgcgacgcctttgccttggcgaaggaaaaggcacctaccattatc 1107389 Query: 489 tttattgatgagattgatgcaattggaacaaagcgttttgac 530 || || |||||| | ||||| |||||||| |||||||||||| Sbjct: 1107390 ttcatcgatgagttggatgctattggaactaagcgttttgac 1107431
>gb|AF220406.1|AF220406 Vitis riparia 26S proteasome regulatory ATPase subunit S10b (Rev136-3) mRNA, complete cds Length = 680 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 477 ccctgcatcatttttattgatgagattgatgcaattgg 514 ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 432 ccctgtatcatttttatggatgagattgatgccattgg 469
>ref|XM_310465.1| Anopheles gambiae str. PEST ENSANGP00000007334 (ENSANGG00000005530), partial mRNA Length = 1284 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 378 acctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaag 437 ||||| ||||| || || || |||||||| || |||||||| |||||||||||||| ||| Sbjct: 703 accttcctgaagctggccggcccgcagctggtgcagatgtttatcggtgacggggcgaag 762 Query: 438 ct 439 || Sbjct: 763 ct 764
>ref|NM_210465.1| Eremothecium gossypii AER254Wp (AER254W), mRNA Length = 1383 Score = 52.0 bits (26), Expect = 0.002 Identities = 128/162 (79%) Strand = Plus / Plus Query: 369 accaatgcaacctttctgaaacttgctggtccgcagctagttcagatgttcatcggtgac 428 |||||||| || ||| |||| || || | ||||||| | || ||||||||||| ||||| Sbjct: 793 accaatgcgacttttttgaagctggccgctccgcagttggtccagatgttcataggtgaa 852 Query: 429 ggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggccccctgcatcatt 488 || || ||||| ||||| || ||||||| |||| ||||| ||||| || ||| || Sbjct: 853 ggtgcgaagctggtccgcgacgcctttgccttggcgaaggaaaaggcacctaccattatc 912 Query: 489 tttattgatgagattgatgcaattggaacaaagcgttttgac 530 || || |||||| | ||||| |||||||| |||||||||||| Sbjct: 913 ttcatcgatgagttggatgctattggaactaagcgttttgac 954
>gb|AF397903.1| Pisum sativum AAA-metalloprotease FtsH (FTSH) mRNA, complete cds; nuclear gene for mitochondrial product Length = 2637 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattgg 514 |||||||||||||||||||||||||| Sbjct: 1332 tttattgatgagattgatgcaattgg 1357
>ref|NM_125854.2| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/ nucleotide binding AT5G64580 mRNA, complete cds Length = 2758 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 492 attgatgagattgatgcaattggaa 516 ||||||||||||||||||||||||| Sbjct: 1240 attgatgagattgatgcaattggaa 1264
>dbj|AB010076.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUB3 Length = 82188 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 492 attgatgagattgatgcaattggaa 516 ||||||||||||||||||||||||| Sbjct: 38836 attgatgagattgatgcaattggaa 38812
>ref|XM_309949.1| Anopheles gambiae str. PEST ENSANGP00000019796 (ENSANGG00000017307), partial mRNA Length = 1296 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 399 ccgcagctagttcagatgttcatcggtgacggggcaaagct 439 |||||||| || |||||||||||||| |||||||| ||||| Sbjct: 736 ccgcagctggtgcagatgttcatcggcgacggggccaagct 776
>emb|CR942586.2| Xenopus tropicalis finished cDNA, clone TGas066b09 Length = 1561 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattggaacaaag 521 |||||||||||||||||||| ||||| |||||| Sbjct: 849 tttattgatgagattgatgcgattggtacaaag 881
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 465 aaggagaaggccccctgcatcatttttattgatgagattgatgc 508 ||||||||||||||||||||||| || || ||||| || ||||| Sbjct: 84128 aaggagaaggccccctgcatcatcttcatcgatgaaatcgatgc 84085
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 477 ccctgcatcatttttattgatgagattgatgc 508 |||||||| |||||||||||||||||||||| Sbjct: 180779 ccctgcattgtttttattgatgagattgatgc 180810
>ref|XM_524821.1| PREDICTED: Pan troglodytes similar to protease (prosome, macropain) 26S subunit, ATPase 1 (LOC469437), mRNA Length = 930 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattggaacaaa 520 ||||||||||| |||||||| ||||||||||| Sbjct: 496 tttattgatgaaattgatgccattggaacaaa 527
>gb|BC062019.1| Rattus norvegicus proteasome (prosome, macropain) 26S subunit, ATPase 3, mRNA (cDNA clone MGC:72399 IMAGE:5620971), complete cds Length = 1630 Score = 48.1 bits (24), Expect = 0.037 Identities = 141/180 (78%) Strand = Plus / Plus Query: 357 tgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatg 416 |||||||| || ||||| || ||||| |||| || || || || ||||| || |||||| Sbjct: 865 tgtgctgctcagaccaaggccaccttcttgaagctggcaggccctcagctggtgcagatg 924 Query: 417 ttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggcc 476 || || || || || || ||||| ||||| ||||| |||| ||||| ||||||||||| Sbjct: 925 tttattggagatggcgccaagctggtccgtgatgcttttgccctggccaaggagaaggca 984 Query: 477 ccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaa 536 || | || || ||||| |||||| | ||||| ||||| || ||||| || ||||||||| Sbjct: 985 ccatctattatctttatagatgagttggatgccattggcaccaagcgcttcgacagtgaa 1044
>ref|XM_745273.1| Aspergillus fumigatus Af293 proteasome regulatory particle subunit Rpt5 (Afu1g06170) partial mRNA Length = 1395 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Plus Query: 384 ctgaaacttgctggtccgcagctagttcagatgttcatcggtgacggggcaaagct 439 ||||| |||||||| || ||||| || ||||||||||| |||||||| || ||||| Sbjct: 817 ctgaagcttgctggacctcagctggtgcagatgttcattggtgacggcgccaagct 872
>ref|XM_381781.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01605.1) partial mRNA Length = 1170 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 553 gaagtgcaacgaactatgttggagttgctgaatcagctagatgg 596 |||||||| ||||| ||| ||||||||||||| ||||| ||||| Sbjct: 751 gaagtgcagcgaaccatgctggagttgctgaaccagcttgatgg 794
>gb|BC060064.1| Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast), mRNA (cDNA clone IMAGE:6418748), containing frame-shift errors Length = 2887 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 492 attgatgagattgatgcaattggaacaaagcg 523 ||||||||||||||||||||||| | |||||| Sbjct: 1199 attgatgagattgatgcaattggcagaaagcg 1230
>gb|AC158362.5| Mus musculus BAC clone RP23-214K5 from chromosome 8, complete sequence Length = 201185 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 492 attgatgagattgatgcaattggaacaaagcg 523 ||||||||||||||||||||||| | |||||| Sbjct: 38281 attgatgagattgatgcaattggcagaaagcg 38250
>emb|AL606843.16| Human DNA sequence from clone RP11-94F13 on chromosome 1 Contains a proteasome (prosome, macropain) 26S subunit ATPase 1 (PSMC10 pseudogene, complete sequence Length = 96028 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 489 tttattgatgagattgatgcaattggaacaaa 520 ||||||||||| |||||||| ||||||||||| Sbjct: 24665 tttattgatgaaattgatgccattggaacaaa 24634
>ref|NM_001015906.2| Xenopus tropicalis AFG3(ATPase family gene 3)-like 1 (yeast) (afg3l1), mRNA Length = 2845 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 480 tgcatcatttttattgatgagattgatgcaattggaacaaagcg 523 |||||| | ||||||||||||||||||||| |||| | |||||| Sbjct: 1193 tgcatcttgtttattgatgagattgatgcagttggcagaaagcg 1236
>gb|BC056978.1| Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast), mRNA (cDNA clone MGC:66836 IMAGE:6821746), complete cds Length = 4243 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 492 attgatgagattgatgcaattggaacaaagcg 523 ||||||||||||||||||||||| | |||||| Sbjct: 1199 attgatgagattgatgcaattggcagaaagcg 1230
>dbj|AK159647.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420027B15 product:AFG3(ATPase family gene 3)-like 1 (yeast), full insert sequence Length = 2983 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 492 attgatgagattgatgcaattggaacaaagcg 523 ||||||||||||||||||||||| | |||||| Sbjct: 1204 attgatgagattgatgcaattggcagaaagcg 1235
>dbj|AK168244.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730071E11 product:AFG3(ATPase family gene 3)-like 1 (yeast), full insert sequence Length = 2386 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 492 attgatgagattgatgcaattggaacaaagcg 523 ||||||||||||||||||||||| | |||||| Sbjct: 1214 attgatgagattgatgcaattggcagaaagcg 1245
>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome Length = 1072950 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 477 ccctgcatcatttttattgatgagattgatgc 508 |||||||| |||||||||||||| |||||||| Sbjct: 270599 ccctgcattatttttattgatgaaattgatgc 270630
>dbj|AK167964.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730043J12 product:AFG3(ATPase family gene 3)-like 1 (yeast), full insert sequence Length = 2503 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 492 attgatgagattgatgcaattggaacaaagcg 523 ||||||||||||||||||||||| | |||||| Sbjct: 1215 attgatgagattgatgcaattggcagaaagcg 1246
>gb|AF329695.1|AF329695 Mus musculus ATP-dependent zinc metalloprotease (Afg3l1) mRNA, complete cds; nuclear gene for mitochondrial product Length = 2479 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 492 attgatgagattgatgcaattggaacaaagcg 523 ||||||||||||||||||||||| | |||||| Sbjct: 1181 attgatgagattgatgcaattggcagaaagcg 1212
>dbj|AK006708.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700047G05 product:AFG3(ATPase family gene 3)-like 1 (yeast), full insert sequence Length = 1800 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 492 attgatgagattgatgcaattggaacaaagcg 523 ||||||||||||||||||||||| | |||||| Sbjct: 531 attgatgagattgatgcaattggcagaaagcg 562
>gb|AC141881.4| Mus musculus BAC clone RP24-226C9 from chromosome 8, complete sequence Length = 142803 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 492 attgatgagattgatgcaattggaacaaagcg 523 ||||||||||||||||||||||| | |||||| Sbjct: 130790 attgatgagattgatgcaattggcagaaagcg 130759
>gb|BC043320.1| Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast), mRNA (cDNA clone IMAGE:5365107), containing frame-shift errors Length = 1760 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 492 attgatgagattgatgcaattggaacaaagcg 523 ||||||||||||||||||||||| | |||||| Sbjct: 62 attgatgagattgatgcaattggcagaaagcg 93
>ref|XM_392722.2| PREDICTED: Apis mellifera similar to GA10280-PA (LOC409198), mRNA Length = 1683 Score = 48.1 bits (24), Expect = 0.037 Identities = 45/52 (86%) Strand = Plus / Plus Query: 551 gagaagtgcaacgaactatgttggagttgctgaatcagctagatggatttag 602 ||||||||||||| ||||||||||| || | ||||| ||||||||||||| Sbjct: 1002 gagaagtgcaacgtactatgttggaattattaaatcaattagatggatttag 1053
>ref|NM_031595.1| Rattus norvegicus proteasome (prosome, macropain) 26S subunit, ATPase 3 (Psmc3), mRNA Length = 1627 Score = 48.1 bits (24), Expect = 0.037 Identities = 141/180 (78%) Strand = Plus / Plus Query: 357 tgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatg 416 |||||||| || ||||| || ||||| |||| || || || || ||||| || |||||| Sbjct: 955 tgtgctgctcagaccaaggccaccttcttgaagctggcaggccctcagctggtgcagatg 1014 Query: 417 ttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggcc 476 || || || || || || ||||| ||||| ||||| |||| ||||| ||||||||||| Sbjct: 1015 tttattggagatggcgccaagctggtccgtgatgcttttgccctggccaaggagaaggca 1074 Query: 477 ccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaa 536 || | || || ||||| |||||| | ||||| ||||| || ||||| || ||||||||| Sbjct: 1075 ccatctattatctttatagatgagttggatgccattggcaccaagcgcttcgacagtgaa 1134
>gb|AE001439.1| Helicobacter pylori J99, complete genome Length = 1643831 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 481 gcatcatttttattgatgagattgatgc 508 ||||||||||||||||||| |||||||| Sbjct: 387935 gcatcatttttattgatgaaattgatgc 387908
>emb|CR926435.2| Xenopus tropicalis finished cDNA, clone TTpA010o23 Length = 2845 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 480 tgcatcatttttattgatgagattgatgcaattggaacaaagcg 523 |||||| | ||||||||||||||||||||| |||| | |||||| Sbjct: 1193 tgcatcttgtttattgatgagattgatgcagttggcagaaagcg 1236
>dbj|AK117044.1| Ciona intestinalis cDNA, clone:cits021n05, full insert sequence Length = 1493 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 480 tgcatcatttttattgatgagattgatgcaattgga 515 |||||||| || || ||||||||||||||||||||| Sbjct: 703 tgcatcatattcatggatgagattgatgcaattgga 738
>gb|AE000511.1| Helicobacter pylori 26695, complete genome Length = 1667867 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 481 gcatcatttttattgatgagattgatgc 508 ||||||||||||||||||| |||||||| Sbjct: 1128443 gcatcatttttattgatgaaattgatgc 1128470
>gb|U59452.1|HPU59452 Helicobacter pylori HpFtsH (ftsH) gene, complete cds Length = 2100 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 481 gcatcatttttattgatgagattgatgc 508 ||||||||||||||||||| |||||||| Sbjct: 833 gcatcatttttattgatgaaattgatgc 860
>ref|NM_054070.2| Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast) (Afg3l1), mRNA Length = 4243 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 492 attgatgagattgatgcaattggaacaaagcg 523 ||||||||||||||||||||||| | |||||| Sbjct: 1199 attgatgagattgatgcaattggcagaaagcg 1230
>gb|U77918.1|RNU77918 Rattus norvegicus spermatogenic cell/sperm-associated Tat-binding protein homolog Sata mRNA, complete cds Length = 1627 Score = 48.1 bits (24), Expect = 0.037 Identities = 141/180 (78%) Strand = Plus / Plus Query: 357 tgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatg 416 |||||||| || ||||| || ||||| |||| || || || || ||||| || |||||| Sbjct: 955 tgtgctgctcagaccaaggccaccttcttgaagctggcaggccctcagctggtgcagatg 1014 Query: 417 ttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggcc 476 || || || || || || ||||| ||||| ||||| |||| ||||| ||||||||||| Sbjct: 1015 tttattggagatggcgccaagctggtccgtgatgcttttgccctggccaaggagaaggca 1074 Query: 477 ccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaa 536 || | || || ||||| |||||| | ||||| ||||| || ||||| || ||||||||| Sbjct: 1075 ccatctattatctttatagatgagttggatgccattggcaccaagcgcttcgacagtgaa 1134
>gb|U97567.1|HPU97567 Helicobacter pylori sress responsive operon containing: chemotaxis response regulator (cheY), heat shock and methylase homolog (hsm), FtsH (ftsH), phosphatidyltransferase homolog (ptr), copper transporter ATPase (copA) and heavy metal-binding homolog (copP) genes, complete cds Length = 7157 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 481 gcatcatttttattgatgagattgatgc 508 ||||||||||||||||||| |||||||| Sbjct: 2370 gcatcatttttattgatgaaattgatgc 2397
>gb|U61844.1|BFU61844 Bacillus firmus hypoxanthine-guanine phosphoribosyltransferase (HGPRT) and cell division protein (FtsH) genes, complete cds Length = 3098 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 474 gccccctgcatcatttttattgatgagattgatgca 509 ||||| || ||||| ||||||||||||||||||||| Sbjct: 1523 gccccatgtatcatctttattgatgagattgatgca 1558
>dbj|D83522.1|RATTBP1E Rat liver mRNA for proteasomal ATPase (TBP1), complete cds Length = 1459 Score = 48.1 bits (24), Expect = 0.037 Identities = 141/180 (78%) Strand = Plus / Plus Query: 357 tgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatg 416 |||||||| || ||||| || ||||| |||| || || || || ||||| || |||||| Sbjct: 829 tgtgctgctcagaccaaggccaccttcttgaagctggcaggccctcagctggtgcagatg 888 Query: 417 ttcatcggtgacggggcaaagctcgtccgagatgcctttgagctggcaaaggagaaggcc 476 || || || || || || ||||| ||||| ||||| |||| ||||| ||||||||||| Sbjct: 889 tttattggagatggcgccaagctggtccgtgatgcttttgccctggccaaggagaaggca 948 Query: 477 ccctgcatcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaa 536 || | || || ||||| |||||| | ||||| ||||| || ||||| || ||||||||| Sbjct: 949 ccatctattatctttatagatgagttggatgccattggcaccaagcgcttcgacagtgaa 1008
>ref|XM_631330.1| Dictyostelium discoideum HIV1 TAT-binding protein (DDB0191435), partial mRNA Length = 1212 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 483 atcatttttattgatgagattgatgcaattg 513 ||||||||||||||||| |||||||| |||| Sbjct: 736 atcatttttattgatgaaattgatgctattg 766
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 486 atttttattgatgagattgatgc 508 ||||||||||||||||||||||| Sbjct: 1023581 atttttattgatgagattgatgc 1023559
>ref|XM_467061.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1242 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 486 atttttattgatgagattgatgc 508 ||||||||||||||||||||||| Sbjct: 595 atttttattgatgagattgatgc 617
>ref|XM_467060.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3060 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 486 atttttattgatgagattgatgc 508 ||||||||||||||||||||||| Sbjct: 1521 atttttattgatgagattgatgc 1543
>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete sequence Length = 249995 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Plus Query: 486 atttttattgatgagattgatgcaattggaacaaagcgttttgacagtgaa 536 |||||||||||||| | ||||| ||||||||||| | |||||||||||| Sbjct: 158320 atttttattgatgaattagatgctattggaacaaaaagatttgacagtgaa 158370
>gb|AY348234.1| Drosophila crucigera RPT4 (Rpt4) gene, partial cds Length = 483 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 480 tgcatcatttttattgatgagattgatgcaattgg 514 ||||||||||| || |||||||| ||||||||||| Sbjct: 48 tgcatcattttcatggatgagatcgatgcaattgg 82
>ref|XM_461726.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G04763g) partial mRNA Length = 1251 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 483 atcatttttattgatgagattgatgcaattg 513 ||||||||||| ||||| ||||||||||||| Sbjct: 766 atcatttttatagatgaaattgatgcaattg 796
>ref|XM_710241.1| Candida albicans SC5314 putative 26S proteasome regulatory particle ATPase Rpt3p (CaO19_5793), mRNA Length = 1236 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 483 atcatttttattgatgagattgatgcaattg 513 ||||||||||||||||| || |||||||||| Sbjct: 751 atcatttttattgatgaaatagatgcaattg 781
>ref|XM_710176.1| Candida albicans SC5314 putative 26S proteasome regulatory particle ATPase Rpt3p (CaO19.13215), mRNA Length = 1236 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 483 atcatttttattgatgagattgatgcaattg 513 ||||||||||||||||| || |||||||||| Sbjct: 751 atcatttttattgatgaaatagatgcaattg 781
>gb|AC145817.1| Pan troglodytes BAC clone RP43-6C4 from 7, complete sequence Length = 134049 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 482 catcatttttattgatgagattgatgcaattggaacaaa 520 |||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 75791 catcatgtttattgatgaaattgacgcaattgggacaaa 75753
>gb|AC108510.3| Homo sapiens chromosome 7 clone RP11-98O9, complete sequence Length = 74746 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Plus Query: 482 catcatttttattgatgagattgatgcaattggaacaaa 520 |||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 41717 catcatgtttattgatgaaattgacgcaattgggacaaa 41755
>ref|XM_794002.1| PREDICTED: Strongylocentrotus purpuratus similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Proteasome subunit P50) (LOC594566), mRNA Length = 862 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Plus Query: 357 tgtgctgcacaaaccaatgcaacctttctgaaacttgctggtccgcagctagttcagatg 416 ||||||||||| || || | ||||| ||||| | ||||| || ||||| ||||||||| Sbjct: 142 tgtgctgcacagacaaagtctaccttcctgaagttagctggcccacagctcgttcagatg 201 Query: 417 ttcatcggtgacggggcaaagct 439 |||||||| ||||| || ||||| Sbjct: 202 ttcatcggagacggagccaagct 224
>emb|Z75025.1|SCYOR117W S.cerevisiae chromosome XV reading frame ORF YOR117w Length = 2711 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 147 tctcgagtaaaggcaatggaggtagatgaaaaacc 181 ||||| ||||| || |||||||||||||||||||| Sbjct: 1376 tctcgtgtaaaagctatggaggtagatgaaaaacc 1410
>emb|Z29366.1|SPMTS2MR S.pombe(972) mts2 mRNA for 26S protease subunit Length = 1518 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Plus Query: 487 tttttattgatgagattgatgcaattggaacaaagcgtt 525 ||||||||||||| |||||||| || || |||||||||| Sbjct: 912 tttttattgatgaaattgatgctataggtacaaagcgtt 950
>emb|X94335.1|SC130KBXV S.cerevisiae 130kb DNA fragment from chromosome XV Length = 129528 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 147 tctcgagtaaaggcaatggaggtagatgaaaaacc 181 ||||| ||||| || |||||||||||||||||||| Sbjct: 69045 tctcgtgtaaaagctatggaggtagatgaaaaacc 69079
>emb|X90518.1|SCXVORFS S.cerevisiae DNA of 51 Kb from chromosome XV right arm Length = 50984 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 147 tctcgagtaaaggcaatggaggtagatgaaaaacc 181 ||||| ||||| || |||||||||||||||||||| Sbjct: 15918 tctcgtgtaaaagctatggaggtagatgaaaaacc 15952
>emb|X73569.1|SCYTA1A S.cerevisiae YTA1 gene Length = 2877 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 147 tctcgagtaaaggcaatggaggtagatgaaaaacc 181 ||||| ||||| || |||||||||||||||||||| Sbjct: 1375 tctcgtgtaaaagctatggaggtagatgaaaaacc 1409
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 483 atcatttttattgatgagattgatgcaattg 513 ||||||||||| ||||| ||||||||||||| Sbjct: 363870 atcatttttatagatgaaattgatgcaattg 363840 Score = 40.1 bits (20), Expect = 9.1 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 540 agtggtgacaggagaagtgcaacgaactatgttgga 575 ||||||||||| |||||| ||| ||||||||||||| Sbjct: 1070752 agtggtgacag-agaagtacaaagaactatgttgga 1070718
>emb|AL121863.1|SPBC4 S.pombe chromosome II cosmid c4 Length = 16037 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 487 tttttattgatgagattgatgcaattggaacaaagcgtt 525 ||||||||||||| |||||||| || || |||||||||| Sbjct: 14351 tttttattgatgaaattgatgctataggtacaaagcgtt 14313
>dbj|AB120534.1| Nicotiana tabacum mRNA, transcriptionally up-regulated region associated with genomic hypomethylation, clone: O17 Length = 1085 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 477 ccctgcatcatttttattgatgagattgatgcaat 511 |||||||| || ||||| ||||||||||||||||| Sbjct: 675 ccctgcataatctttatggatgagattgatgcaat 641
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 489 tttattgatgagattgatgcaattggaacaa 519 ||||| ||||||||||||||||| ||||||| Sbjct: 1170993 tttatcgatgagattgatgcaatcggaacaa 1170963
>ref|NM_001021391.1| Schizosaccharomyces pombe 972h- 19S proteasome regulatory protein (SPBC4.07c), partial mRNA Length = 1347 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Plus Query: 487 tttttattgatgagattgatgcaattggaacaaagcgtt 525 ||||||||||||| |||||||| || || |||||||||| Sbjct: 863 tttttattgatgaaattgatgctataggtacaaagcgtt 901
>ref|XM_341714.2| PREDICTED: Rattus norvegicus AFG3(ATPase family gene 3)-like 1 (yeast) (predicted) (Afg3l1_predicted), mRNA Length = 2605 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 492 attgatgagattgatgcaattgg 514 ||||||||||||||||||||||| Sbjct: 1199 attgatgagattgatgcaattgg 1221
>gb|AF270040.1|AF270040 Staphylococcus epidermidis strain SR1 clone step.1043e03 genomic sequence Length = 3246 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 474 gccccctgcatcatttttattgatgagattgatgc 508 ||||| || ||||||||||||||||| |||||||| Sbjct: 2428 gccccatgtatcatttttattgatgaaattgatgc 2394
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 489 tttattgatgagattgatgcaat 511 ||||||||||||||||||||||| Sbjct: 1600239 tttattgatgagattgatgcaat 1600217 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaat 511 ||||||||||||||||||||||| Sbjct: 612043 tttattgatgagattgatgcaat 612065
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 474 gccccctgcatcatttttattgatgagattgatgc 508 ||||| || ||||||||||||||||| |||||||| Sbjct: 141440 gccccatgtatcatttttattgatgaaattgatgc 141474
>dbj|AK069509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020K03, full insert sequence Length = 3059 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 486 atttttattgatgagattgatgc 508 ||||||||||||||||||||||| Sbjct: 1521 atttttattgatgagattgatgc 1543
>dbj|AK058221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-G01, full insert sequence Length = 1242 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 486 atttttattgatgagattgatgc 508 ||||||||||||||||||||||| Sbjct: 595 atttttattgatgagattgatgc 617
>gb|DQ332139.1| Synthetic construct Saccharomyces cerevisiae clone FLH201026.01X RPT5 gene, complete sequence Length = 1305 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 147 tctcgagtaaaggcaatggaggtagatgaaaaacc 181 ||||| ||||| || |||||||||||||||||||| Sbjct: 493 tctcgtgtaaaagctatggaggtagatgaaaaacc 527
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 474 gccccctgcatcatttttattgatgagattgatgc 508 ||||| || ||||||||||||||||| |||||||| Sbjct: 2346423 gccccatgtatcatttttattgatgaaattgatgc 2346389
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 486 atttttattgatgagattgatgcaattggaa 516 |||||||||||||| |||||||| ||||||| Sbjct: 801007 atttttattgatgaaattgatgccattggaa 800977 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 486 atttttattgatgagattgatgca 509 ||||||||||| |||||||||||| Sbjct: 856326 atttttattgacgagattgatgca 856303
>gb|L16578.1|DDITATBPA Dictyostelium discoideum HIV1 TAT-binding protein homologous protein mRNA, complete cds Length = 1383 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 483 atcatttttattgatgagattgatgcaattg 513 ||||||||||||||||| |||||||| |||| Sbjct: 906 atcatttttattgatgaaattgatgctattg 936
>gb|AY750868.1| Toxoptera citricida putative 26S protease regulatory subunit 6A mRNA, complete cds Length = 1296 Score = 44.1 bits (22), Expect = 0.58 Identities = 37/42 (88%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattggaacaaagcgttttgac 530 |||||||||||| | ||||| ||||| ||||| ||||||||| Sbjct: 829 tttattgatgagctggatgctattggtacaaaacgttttgac 870 Score = 42.1 bits (21), Expect = 2.3 Identities = 81/101 (80%) Strand = Plus / Plus Query: 300 aaaggagttcttctatatggaccacctgggacgggaaagacgttgatggctcgtgcatgt 359 ||||||||||| ||||||| |||||||| || ||||| || | | ||||| |||||| Sbjct: 640 aaaggagttctgttatatggtccacctggtactggaaaaacacttttagctcgagcatgt 699 Query: 360 gctgcacaaaccaatgcaacctttctgaaacttgctggtcc 400 ||||| ||||| || | |||||| | || ||||||||||| Sbjct: 700 gctgctcaaacaaagtcgacctttttaaagcttgctggtcc 740
>gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section 7 of 9 of the complete sequence Length = 250713 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattgg 514 ||||||||||| |||||||||||||| Sbjct: 147578 tttattgatgaaattgatgcaattgg 147603
>gb|DQ191627.1| Solanum tuberosum 26S proteasome AAA-ATPase subunit RPT4a-like protein mRNA, complete cds Length = 1567 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 477 ccctgcatcatttttattgatgagattgatgcaattgg 514 ||||||||||| || || |||||||| ||||||||||| Sbjct: 763 ccctgcatcatattcatggatgagatagatgcaattgg 800
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 563 gaactatgttggagttgctgaatcagctagatgg 596 |||| |||||||||||||| |||||||| ||||| Sbjct: 10437260 gaaccatgttggagttgcttaatcagctggatgg 10437293 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattggaacaaag 521 |||||||| |||||||||||| | ||||||||| Sbjct: 10437054 tttattgacgagattgatgcagtcggaacaaag 10437086
>emb|AJ635223.1| Pisum sativum mRNA for ftsH-like protease (ftsh4 gene) Length = 2683 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattgg 514 |||||||||||||||||||| ||||| Sbjct: 1262 tttattgatgagattgatgctattgg 1287
>emb|CR932506.1|CNS0KY96 Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 44.1 bits (22), Expect = 0.58 Identities = 49/58 (84%) Strand = Plus / Minus Query: 316 atggaccacctgggacgggaaagacgttgatggctcgtgcatgtgctgcacaaaccaa 373 ||||||||||||| || || || || |||||||| | ||||||||||| |||||||| Sbjct: 273 atggaccacctggaactggtaaaactatgatggctagagcatgtgctgctcaaaccaa 216
>ref|XM_386992.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06816.1) partial mRNA Length = 2658 Score = 44.1 bits (22), Expect = 0.58 Identities = 40/46 (86%) Strand = Plus / Plus Query: 469 agaaggccccctgcatcatttttattgatgagattgatgcaattgg 514 |||| ||||| |||||||| ||||| || ||||||||||| ||||| Sbjct: 1475 agaacgccccttgcatcatctttatcgacgagattgatgccattgg 1520
>ref|XM_444885.1| Candida glabrata CBS138 hypothetical protein (CAGL0A02750g) partial mRNA Length = 1290 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 551 gagaagtgcaacgaactatgttggag 576 ||||||||||| |||||||||||||| Sbjct: 881 gagaagtgcaaagaactatgttggag 906 Score = 44.1 bits (22), Expect = 0.58 Identities = 61/74 (82%) Strand = Plus / Plus Query: 402 cagctagttcagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctg 461 ||||| || ||||||||||||||||| || ||||| | ||||| || || || | ||| Sbjct: 733 cagctggtgcagatgttcatcggtgaaggtgcaaaattagtccgtgacgcgttcgccctg 792 Query: 462 gcaaaggagaaggc 475 |||||||||||||| Sbjct: 793 gcaaaggagaaggc 806
>ref|XM_537239.2| PREDICTED: Canis familiaris similar to Nuclear valosin-containing protein-like (Nuclear VCP-like protein) (NVLp) (LOC480117), mRNA Length = 2868 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 487 tttttattgatgagattgatgcaatt 512 ||||||||||||| |||||||||||| Sbjct: 1283 tttttattgatgaaattgatgcaatt 1308
>emb|CR932959.2| Medicago truncatula chromosome 5 clone mte1-55f11, COMPLETE SEQUENCE Length = 102868 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 489 tttattgatgagattgatgcaattgg 514 |||||||||||||||||||| ||||| Sbjct: 70191 tttattgatgagattgatgctattgg 70166
>gb|BC048217.1| Homo sapiens spermatogenesis associated 5, mRNA (cDNA clone MGC:47791 IMAGE:6052305), complete cds Length = 2243 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 aaaggagttcttctatatggaccacctggg 329 |||||||||||||| ||||| ||||||||| Sbjct: 1997 aaaggagttcttctctatgggccacctggg 2026
>ref|XM_760724.1| Theileria parva strain Muguga chromosome 1 26S proteasome subunit (TP01_0290) partial mRNA Length = 1423 Score = 44.1 bits (22), Expect = 0.58 Identities = 46/54 (85%) Strand = Plus / Plus Query: 482 catcatttttattgatgagattgatgcaattggaacaaagcgttttgacagtga 535 ||||||||| || |||||||| ||||| ||||| || ||| | ||||||||||| Sbjct: 931 catcattttcatagatgagatagatgcgattggtacgaagagatttgacagtga 984
>ref|XM_721689.1| Plasmodium yoelii yoelii str. 17XNL 26S proteasome subunit 4 protein (PY00768) partial mRNA Length = 1344 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 487 tttttattgatgagattgatgcaattggaacaaa 520 ||||||||||||| ||||||||| |||| ||||| Sbjct: 866 tttttattgatgaaattgatgcagttggtacaaa 899
>ref|XM_947738.1| Theileria annulata strain Ankara 26S proteasome ATPase subunit (TA09310) partial mRNA Length = 1347 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattgg 514 |||||||||||||| ||||||||||| Sbjct: 868 tttattgatgagatagatgcaattgg 893
>ref|XM_736668.1| Plasmodium chabaudi chabaudi 26S proteasome regulatory subunit 4 (PC000434.02.0) partial mRNA Length = 882 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 487 tttttattgatgagattgatgcaattggaacaaa 520 ||||||||||||| ||||||||| |||| ||||| Sbjct: 404 tttttattgatgaaattgatgcagttggtacaaa 437
>gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete sequence Length = 108164 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattgg 514 |||||||||||||||||||| ||||| Sbjct: 29980 tttattgatgagattgatgctattgg 30005 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 489 tttattgatgagattgatgcaattgg 514 |||||||||||||||||| ||||||| Sbjct: 20484 tttattgatgagattgattcaattgg 20459
>gb|AC123575.10| Medicago truncatula clone mth1-31p6, complete sequence Length = 83007 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattgg 514 |||||||||||||||||||| ||||| Sbjct: 68791 tttattgatgagattgatgctattgg 68816
>ref|XM_791137.1| PREDICTED: Strongylocentrotus purpuratus similar to CG5289-PA (LOC591581), mRNA Length = 1396 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 492 attgatgagattgatgcaattggaacaaag 521 ||||||||||| ||||| |||||||||||| Sbjct: 923 attgatgagatcgatgctattggaacaaag 952
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 563 gaactatgttggagttgctgaatcagctagatgg 596 |||| |||||||||||||| |||||||| ||||| Sbjct: 93813 gaaccatgttggagttgcttaatcagctggatgg 93846 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattggaacaaag 521 |||||||| |||||||||||| | ||||||||| Sbjct: 93607 tttattgacgagattgatgcagtcggaacaaag 93639
>ref|XM_777098.1| PREDICTED: Strongylocentrotus purpuratus similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) (LOC576830), mRNA Length = 1164 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 402 cagctagttcagatgttcatcggtgacggggcaaagct 439 ||||| ||||||||||||||||| ||||| || ||||| Sbjct: 487 cagctcgttcagatgttcatcggggacggagccaagct 524
>ref|XM_969766.1| PREDICTED: Tribolium castaneum similar to CG5289-PA (LOC663731), mRNA Length = 1377 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 487 tttttattgatgagattgatgc 508 |||||||||||||||||||||| Sbjct: 899 tttttattgatgagattgatgc 920
>ref|XM_779351.1| PREDICTED: Strongylocentrotus purpuratus similar to Mitochondrial chaperone Bcs1l (BCS1-like protein) (LOC579223), mRNA Length = 1257 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 308 tcttctatatggaccacctggg 329 |||||||||||||||||||||| Sbjct: 678 tcttctatatggaccacctggg 699
>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence Length = 485192 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 551 gagaagtgcaacgaactatgttggag 576 ||||||||||| |||||||||||||| Sbjct: 288658 gagaagtgcaaagaactatgttggag 288683 Score = 44.1 bits (22), Expect = 0.58 Identities = 61/74 (82%) Strand = Plus / Plus Query: 402 cagctagttcagatgttcatcggtgacggggcaaagctcgtccgagatgcctttgagctg 461 ||||| || ||||||||||||||||| || ||||| | ||||| || || || | ||| Sbjct: 288510 cagctggtgcagatgttcatcggtgaaggtgcaaaattagtccgtgacgcgttcgccctg 288569 Query: 462 gcaaaggagaaggc 475 |||||||||||||| Sbjct: 288570 gcaaaggagaaggc 288583
>emb|BX571661.1| Wolinella succinogenes, complete genome; segment 5/7 Length = 346613 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 483 atcatttttattgatgagattgatgc 508 ||||| |||||||||||||||||||| Sbjct: 52622 atcatctttattgatgagattgatgc 52597
>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 226576 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 486 atttttattgatgagattgatgcaattgga 515 ||||||||||| ||||| |||||||||||| Sbjct: 194504 atttttattgacgagatagatgcaattgga 194533
>emb|AJ010592.2|GTAJ10592 Guillardia theta DNA for complete sequence of nucleomorph chromosome 2 Length = 180915 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 486 atttttattgatgagattgatgcaattggaacaa 519 |||||||| ||||| ||||||||||| ||||||| Sbjct: 100039 atttttatggatgaaattgatgcaataggaacaa 100006 Score = 40.1 bits (20), Expect = 9.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 480 tgcatcatttttattgatgagattgatgcaattgga 515 ||||| || ||||| |||||| |||||||||||||| Sbjct: 75396 tgcattatatttatcgatgaggttgatgcaattgga 75431
>dbj|AK091384.1| Homo sapiens cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to Mus musculus spermatogenesis associated factor (SPAF) mRNA Length = 3256 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 aaaggagttcttctatatggaccacctggg 329 |||||||||||||| ||||| ||||||||| Sbjct: 2012 aaaggagttcttctctatgggccacctggg 2041
>gb|AF479656.1| Homo sapiens spermatogenesis associated factor protein (SPAF) mRNA, complete cds Length = 2495 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 aaaggagttcttctatatggaccacctggg 329 |||||||||||||| ||||| ||||||||| Sbjct: 2027 aaaggagttcttctctatgggccacctggg 2056
>gb|AC109357.3| Homo sapiens BAC clone RP11-636M7 from 4, complete sequence Length = 110883 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 aaaggagttcttctatatggaccacctggg 329 |||||||||||||| ||||| ||||||||| Sbjct: 41299 aaaggagttcttctctatgggccacctggg 41328
>gb|AF361489.1| Homo sapiens spermatogenesis associated factor (SPAF) mRNA, complete cds Length = 3359 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 aaaggagttcttctatatggaccacctggg 329 |||||||||||||| ||||| ||||||||| Sbjct: 2053 aaaggagttcttctctatgggccacctggg 2082
>gb|AE010283.1| Pyrococcus furiosus DSM 3638, section 158 of 173 of the complete genome Length = 10991 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 492 attgatgagattgatgcaattg 513 |||||||||||||||||||||| Sbjct: 2708 attgatgagattgatgcaattg 2687
>ref|NM_145207.1| Homo sapiens spermatogenesis associated 5 (SPATA5), mRNA Length = 3359 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 aaaggagttcttctatatggaccacctggg 329 |||||||||||||| ||||| ||||||||| Sbjct: 2053 aaaggagttcttctctatgggccacctggg 2082
>ref|XM_625767.1| Cryptosporidium parvum Iowa II CDC48 like AAA ATpase (cgd4_1730), partial mRNA Length = 2676 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 486 atttttattgatgagattgatgcaattgga 515 |||||| ||||||| ||||||||||||||| Sbjct: 1984 attttttttgatgaaattgatgcaattgga 2013
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 563 gaactatgttggagttgctgaatcagctagatgg 596 |||| |||||||||||||| |||||||| ||||| Sbjct: 10435361 gaaccatgttggagttgcttaatcagctggatgg 10435394 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattggaacaaag 521 |||||||| |||||||||||| | ||||||||| Sbjct: 10435155 tttattgacgagattgatgcagtcggaacaaag 10435187
>gb|AY967593.1| Schmidtea mediterranea clone NBE.3.05B mRNA sequence Length = 999 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 487 tttttattgatgagattgatgcaattggaacaaa 520 ||||||||||||| || |||||| |||||||||| Sbjct: 524 tttttattgatgaaatcgatgcagttggaacaaa 491
>dbj|AB061249.1| Solanum tuberosum StRPT4a mRNA for 26S proteasome AAA-ATPase subunit RPT4a, complete cds Length = 1484 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 477 ccctgcatcatttttattgatgagattgatgcaattgg 514 ||||||||||| || || |||||||| ||||||||||| Sbjct: 751 ccctgcatcatattcatggatgagatagatgcaattgg 788
>dbj|AK069811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030D05, full insert sequence Length = 1579 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 563 gaactatgttggagttgctgaatcagctagatgg 596 |||| |||||||||||||| |||||||| ||||| Sbjct: 1028 gaaccatgttggagttgcttaatcagctggatgg 1061 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattggaacaaag 521 |||||||| |||||||||||| | ||||||||| Sbjct: 955 tttattgacgagattgatgcagtcggaacaaag 987
>dbj|AK058779.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-C01, full insert sequence Length = 651 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 563 gaactatgttggagttgctgaatcagctagatgg 596 |||| |||||||||||||| |||||||| ||||| Sbjct: 39 gaaccatgttggagttgcttaatcagctggatgg 72
>gb|AF117339.1|AF117339 Nicotiana tabacum FtsH-like protein Pftf precursor (Pftf) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2346 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 637 ccaatcgtgcagatattcttga 658 |||||||||||||||||||||| Sbjct: 1205 ccaatcgtgcagatattcttga 1226
>dbj|AK112581.1| Ciona intestinalis cDNA, clone:cicl061h02, full insert sequence Length = 1644 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattgg 514 |||||||||||||||||||| ||||| Sbjct: 914 tttattgatgagattgatgccattgg 939
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome Length = 1698955 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 481 gcatcatttttattgatgagattgat 506 ||||| |||||||||||||||||||| Sbjct: 1670266 gcatcgtttttattgatgagattgat 1670291
>emb|AL832175.1|HSM803482 Homo sapiens mRNA; cDNA DKFZp686K0316 (from clone DKFZp686K0316) Length = 3319 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 300 aaaggagttcttctatatggaccacctggg 329 |||||||||||||| ||||| ||||||||| Sbjct: 2050 aaaggagttcttctctatgggccacctggg 2079
>emb|CR956434.13| M.truncatula DNA sequence from clone MTH2-35N9 on chromosome 3, complete sequence Length = 113074 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattgg 514 |||||||||||||||||||| ||||| Sbjct: 110740 tttattgatgagattgatgctattgg 110765 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 489 tttattgatgagattgatgcaattgg 514 |||||||||||||||||| ||||||| Sbjct: 101244 tttattgatgagattgattcaattgg 101219
>dbj|AB037154.1| Oryza sativa (japonica cultivar-group) OsRPT2b mRNA for 26S proteasome regulatory particle triple-A ATPase subunit2b, complete cds Length = 1616 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 563 gaactatgttggagttgctgaatcagctagatgg 596 |||| |||||||||||||| |||||||| ||||| Sbjct: 972 gaaccatgttggagttgcttaatcagctggatgg 1005 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattggaacaaag 521 |||||||| |||||||||||| | ||||||||| Sbjct: 899 tttattgacgagattgatgcagtcggaacaaag 931
>gb|CP000013.1| Borrelia garinii PBi, complete genome Length = 904246 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 480 tgcatcatttttattgatgagattgatgc 508 ||||| ||||||||||||||| ||||||| Sbjct: 828358 tgcattatttttattgatgagcttgatgc 828386
>ref|XM_549810.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3709 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 401 gcagctagttcagatgttcat 421 ||||||||||||||||||||| Sbjct: 2764 gcagctagttcagatgttcat 2784
>ref|XM_635235.1| Dictyostelium discoideum hypothetical protein (DDB0218364), partial mRNA Length = 2604 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 483 atcatttttattgatgagattgatgcaat 511 ||||||||||| ||||| ||||||||||| Sbjct: 934 atcatttttatcgatgaaattgatgcaat 962
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 480 tgcatcatttttattgatgagattgatgc 508 ||||| |||||||||||||| |||||||| Sbjct: 454737 tgcattatttttattgatgaaattgatgc 454709 Score = 40.1 bits (20), Expect = 9.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 465 aaggagaaggccccctgcatcatttttattgatgagattgatgc 508 |||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 9106 aaggagaaagctccatgtatcatctttattgatgaaattgatgc 9149
>ref|NM_185558.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1597 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattggaacaaag 521 ||||| |||||||||||||| ||||||||||| Sbjct: 963 tttatcgatgagattgatgctgttggaacaaag 995
>ref|XM_507415.1| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA Length = 1599 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattggaacaaag 521 ||||| |||||||||||||| ||||||||||| Sbjct: 962 tttatcgatgagattgatgctgttggaacaaag 994
>ref|XM_506590.2| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA Length = 1615 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 489 tttattgatgagattgatgcaattggaacaaag 521 ||||| |||||||||||||| ||||||||||| Sbjct: 962 tttatcgatgagattgatgctgttggaacaaag 994
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 300 aaaggagttcttctatatggaccacctgggacgggaaagac 340 |||||||| ||||||||||| ||||| || || |||||||| Sbjct: 3697678 aaaggagtgcttctatatggtccaccgggaactggaaagac 3697638
>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome Length = 1111496 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 489 tttattgatgagattgatgca 509 ||||||||||||||||||||| Sbjct: 114070 tttattgatgagattgatgca 114050
>ref|XM_419391.1| PREDICTED: Gallus gallus similar to Nuclear valosin-containing protein-like (Nuclear VCP-like protein) (NVLp) (LOC421326), mRNA Length = 3651 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 487 tttttattgatgagattgatgcaat 511 |||| |||||||||||||||||||| Sbjct: 1124 ttttcattgatgagattgatgcaat 1148
>ref|XM_954509.1| Neurospora crassa OR74A hypothetical protein (NCU02420.1) partial mRNA Length = 2493 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 481 gcatcatttttattgatgagattga 505 ||||||||||| ||||||||||||| Sbjct: 2006 gcatcatttttgttgatgagattga 2030 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,741,897 Number of Sequences: 3902068 Number of extensions: 5741897 Number of successful extensions: 103595 Number of sequences better than 10.0: 434 Number of HSP's better than 10.0 without gapping: 433 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 101445 Number of HSP's gapped (non-prelim): 2070 length of query: 665 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 642 effective length of database: 17,143,297,704 effective search space: 11005997125968 effective search space used: 11005997125968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)