Clone Information

BLAST Search Result

Clone Name	bags22f01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RUVB1_ASPFU (Q4WPW8) RuvB-like helicase 1 (EC 3.6.1.-)	165	2e-41
2	RUVB1_EMENI (Q5BBV9) RuvB-like helicase 1 (EC 3.6.1.-)	165	2e-41
3	RUVB1_KLULA (Q6CQA9) RuvB-like helicase 1 (EC 3.6.1.-)	161	5e-40
4	RUVB1_DEBHA (Q6BI60) RuvB-like helicase 1 (EC 3.6.1.-)	160	8e-40
5	RUVB1_HUMAN (Q9Y265) RuvB-like 1 (EC 3.6.1.-) (49-kDa TATA box-b...	160	1e-39
6	RUVB1_RAT (P60123) RuvB-like 1 (EC 3.6.1.-) (49-kDa TATA box-bin...	159	1e-39
7	RUVB1_MOUSE (P60122) RuvB-like 1 (EC 3.6.1.-) (49-kDa TATA box-b...	159	1e-39
8	RUVB1_ASHGO (Q750R1) RuvB-like helicase 1 (EC 3.6.1.-)	159	1e-39
9	RUVB1_BRARE (Q8AWW7) RuvB-like 1 (EC 3.6.1.-) (Pontin) (zPontin)	159	2e-39
10	RUVB1_YEAST (Q03940) RuvB-like protein 1 (EC 3.6.1.-) (RUVBL1) (...	159	2e-39
11	RUVB1_SCHPO (Q9C0X6) RuvB-like helicase 1 (EC 3.6.1.-)	158	3e-39
12	RUVB1_CANGA (Q6FU78) RuvB-like helicase 1 (EC 3.6.1.-)	157	5e-39
13	RUVB1_NEUCR (Q8WZS3) RuvB-like helicase 1 (EC 3.6.1.-)	157	5e-39
14	RUVB1_CANAL (Q5A0W7) RuvB-like helicase 1 (EC 3.6.1.-)	157	5e-39
15	RUVB1_XENLA (Q9DE26) RuvB-like 1 (EC 3.6.1.-) (Pontin)	157	9e-39
16	RUVB1_GIBZE (Q4ICA8) RuvB-like helicase 1 (EC 3.6.1.-)	155	2e-38
17	RUVB1_YARLI (Q6CB52) RuvB-like helicase 1 (EC 3.6.1.-)	153	1e-37
18	RUVB1_CRYNE (Q5KPZ8) RuvB-like helicase 1 (EC 3.6.1.-)	149	2e-36
19	RUVB1_USTMA (Q4P112) RuvB-like helicase 1 (EC 3.6.1.-)	148	3e-36
20	RUVB2_SCHPO (O94692) RuvB-like helicase 2 (EC 3.6.1.-)	57	1e-08
21	RUVB2_BRARE (P83571) RuvB-like 2 (EC 3.6.1.-) (Reptin) (zReptin)	55	6e-08
22	RUVB2_DEBHA (Q6BSB8) RuvB-like helicase 2 (EC 3.6.1.-)	54	8e-08
23	RUVB2_CANAL (Q5AGZ9) RuvB-like helicase 2 (EC 3.6.1.-)	54	1e-07
24	RUVB2_XENLA (Q9DE27) RuvB-like 2 (EC 3.6.1.-) (Reptin)	53	2e-07
25	RUVB2_MOUSE (Q9WTM5) RuvB-like 2 (EC 3.6.1.-) (p47 protein)	53	2e-07
26	RUVB2_HUMAN (Q9Y230) RuvB-like 2 (EC 3.6.1.-) (48-kDa TATA box-b...	53	2e-07
27	RUVB2_GIBZE (Q4I948) RuvB-like helicase 2 (EC 3.6.1.-)	53	2e-07
28	RUVB2_NEUCR (Q873C7) RuvB-like helicase 2 (EC 3.6.1.-)	52	3e-07
29	RUVB2_USTMA (Q4P6N7) RuvB-like helicase 2 (EC 3.6.1.-)	52	4e-07
30	RUVB2_YARLI (Q6C3X6) RuvB-like helicase 2 (EC 3.6.1.-)	52	4e-07
31	RUVB2_CANGA (Q6FSF1) RuvB-like helicase 2 (EC 3.6.1.-)	50	1e-06
32	RUVB2_KLULA (Q6CT29) RuvB-like helicase 2 (EC 3.6.1.-)	50	1e-06
33	RUVB2_YEAST (Q12464) RuvB-like protein 2 (EC 3.6.1.-) (RUVBL2) (...	50	2e-06
34	RUVB2_ASPFU (Q4WKH9) RuvB-like helicase 2 (EC 3.6.1.-)	50	2e-06
35	RUVB2_CRYNE (Q5KND8) RuvB-like helicase 2 (EC 3.6.1.-)	50	2e-06
36	RUVB2_EMENI (Q5BGK3) RuvB-like helicase 2 (EC 3.6.1.-)	49	3e-06
37	RUVB2_ASHGO (Q755G5) RuvB-like helicase 2 (EC 3.6.1.-)	49	3e-06
38	ICAC_STAAW (Q79ZV2) Biofilm PIA synthesis protein icaC (Intercel...	31	0.72
39	ICAC_STAAU (Q9RQP6) Biofilm PIA synthesis protein icaC (Intercel...	31	0.72
40	ICAC_STAAS (Q6G605) Biofilm PIA synthesis protein icaC (Intercel...	31	0.72
41	ICAC_STAAR (Q6GDD5) Biofilm PIA synthesis protein icaC (Intercel...	31	0.72
42	ICAC_STAAN (Q7A348) Biofilm PIA synthesis protein icaC (Intercel...	31	0.72
43	ICAC_STAAM (Q931E4) Biofilm PIA synthesis protein icaC (Intercel...	31	0.72
44	MATK_OXYPI (Q5D1B9) Maturase K (Intron maturase)	30	1.6
45	OR1L1_HUMAN (Q8NH94) Olfactory receptor 1L1 (Olfactory receptor ...	30	2.1
46	GPA1_SOYBN (P49084) Guanine nucleotide-binding protein alpha-1 s...	29	2.7
47	ICAC_STAEQ (Q5HKP7) Biofilm PIA synthesis protein icaC (Intercel...	29	2.7
48	ICAC_STAEP (P69518) Biofilm PIA synthesis protein icaC (Intercel...	29	2.7
49	CKLF6_MOUSE (Q9CZ69) CKLF-like MARVEL transmembrane domain-conta...	29	2.7
50	CNIH4_PONPY (Q5R9M4) Cornichon homolog 4	29	3.6
51	CNIH4_MOUSE (Q9CX13) Cornichon homolog 4	29	3.6
52	CNIH4_HUMAN (Q9P003) Cornichon homolog 4	29	3.6
53	MBP_HETFR (P20939) Myelin basic protein (MBP)	29	3.6
54	SODM_STRAI (O33603) Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) (...	28	4.7
55	SODM_STRAG (P0A4J5) Superoxide dismutase [Mn/Fe] (EC 1.15.1.1)	28	4.7
56	SODM_STRA5 (P0A4J4) Superoxide dismutase [Mn/Fe] (EC 1.15.1.1)	28	4.7
57	SODM_STRA3 (P0A4J3) Superoxide dismutase [Mn/Fe] (EC 1.15.1.1)	28	4.7
58	VGLG_SYNV (P27277) Spike glycoprotein precursor	28	4.7
59	YP6A_CAEEL (Q09219) Hypothetical protein B0495.10	28	4.7
60	MATK_TRIUN (Q9XPP8) Maturase K (Intron maturase)	28	4.7
61	ERCC5_XENLA (P14629) DNA-repair protein complementing XP-G cells...	28	6.1
62	IF2_STAS1 (Q49X54) Translation initiation factor IF-2	28	6.1
63	MATK_PARTT (Q9XR19) Maturase K (Intron maturase)	28	6.1
64	UT2_HUMAN (Q15849) Urea transporter, kidney	28	6.1
65	CNIH4_XENTR (Q6P3N5) Cornichon homolog 4	28	8.0
66	ATE_VIBPA (Q87QY2) Putative arginyl-tRNA--protein transferase (E...	28	8.0
67	YNE2_CAEEL (P30641) Hypothetical protein R08D7.2	28	8.0
68	TM86B_HUMAN (Q8N661) Transmembrane protein 86B	28	8.0
69	UT2_RAT (Q62668) Urea transporter, kidney	28	8.0
70	TBX32_CAEEL (O61764) Putative T-box protein 32	28	8.0

>RUVB1_ASPFU (Q4WPW8) RuvB-like helicase 1 (EC 3.6.1.-)|
          Length = 458

 Score =  165 bits (418), Expect = 2e-41
 Identities = 76/89 (85%), Positives = 88/89 (98%)
 Frame = +3

Query: 3   AFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A+ATE+DLEAEEYVP+PKGEVHKKKEIVQDVTLHDLD ANA+PQGGQD++S+MGQ+MKP+
Sbjct: 209 AYATEFDLEAEEYVPVPKGEVHKKKEIVQDVTLHDLDMANARPQGGQDVMSMMGQLMKPK 268

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
           KTEIT+KLRQEINKVVNRYID+G+AELVP
Sbjct: 269 KTEITDKLRQEINKVVNRYIDQGVAELVP 297

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>RUVB1_EMENI (Q5BBV9) RuvB-like helicase 1 (EC 3.6.1.-)|
          Length = 460

 Score =  165 bits (418), Expect = 2e-41
 Identities = 76/89 (85%), Positives = 88/89 (98%)
 Frame = +3

Query: 3   AFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A+ATE+DLEAEEYVP+PKGEVHKKKEIVQDVTLHDLD ANA+PQGGQD++S+MGQ+MKP+
Sbjct: 209 AYATEFDLEAEEYVPVPKGEVHKKKEIVQDVTLHDLDIANARPQGGQDVMSMMGQLMKPK 268

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
           KTEIT+KLRQEINKVVNRYID+G+AELVP
Sbjct: 269 KTEITDKLRQEINKVVNRYIDQGVAELVP 297

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>RUVB1_KLULA (Q6CQA9) RuvB-like helicase 1 (EC 3.6.1.-)|
          Length = 457

 Score =  161 bits (407), Expect = 5e-40
 Identities = 74/89 (83%), Positives = 86/89 (96%)
 Frame = +3

Query: 3   AFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           AFATE+DLEAEEYVP+PKGEVHKKKEIVQDVTLHDLD ANA+PQGGQD++S+MGQ+MKP+
Sbjct: 211 AFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARPQGGQDVISMMGQLMKPK 270

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
           KTEITEKLR E+NKVV +YID+G+AELVP
Sbjct: 271 KTEITEKLRHEVNKVVAKYIDQGVAELVP 299

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>RUVB1_DEBHA (Q6BI60) RuvB-like helicase 1 (EC 3.6.1.-)|
          Length = 457

 Score =  160 bits (405), Expect = 8e-40
 Identities = 72/89 (80%), Positives = 87/89 (97%)
 Frame = +3

Query: 3   AFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A+ATE+DLEAEEYVP+PKGEVHKKKEIVQDVTLHDLD ANA+PQGGQD+LS+MGQ++KPR
Sbjct: 210 AYATEFDLEAEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARPQGGQDVLSMMGQLLKPR 269

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
           KTEIT+KLR E+NKVV++YID+G+AEL+P
Sbjct: 270 KTEITDKLRSEVNKVVSKYIDQGVAELIP 298

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>RUVB1_HUMAN (Q9Y265) RuvB-like 1 (EC 3.6.1.-) (49-kDa TATA box-binding|
           protein-interacting protein) (49 kDa TBP-interacting
           protein) (TIP49a) (Pontin 52) (Nuclear matrix protein
           238) (NMP 238) (54 kDa erythrocyte cytosolic protein)
           (ECP-54) (TIP60-associ
          Length = 456

 Score =  160 bits (404), Expect = 1e-39
 Identities = 74/88 (84%), Positives = 86/88 (97%)
 Frame = +3

Query: 6   FATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPRK 185
           +ATE+DLEAEEYVP+PKG+VHKKKEI+QDVTLHDLD ANA+PQGGQDILS+MGQ+MKP+K
Sbjct: 209 YATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKK 268

Query: 186 TEITEKLRQEINKVVNRYIDEGIAELVP 269
           TEIT+KLR EINKVVN+YID+GIAELVP
Sbjct: 269 TEITDKLRGEINKVVNKYIDQGIAELVP 296

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>RUVB1_RAT (P60123) RuvB-like 1 (EC 3.6.1.-) (49-kDa TATA box-binding|
           protein-interacting protein) (49 kDa TBP-interacting
           protein) (TIP49a) (Pontin 52) (DNA helicase p50)
          Length = 456

 Score =  159 bits (403), Expect = 1e-39
 Identities = 73/88 (82%), Positives = 86/88 (97%)
 Frame = +3

Query: 6   FATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPRK 185
           +ATE+DLEAEEYVP+PKG+VHKKKEI+QDVTLHDLD ANA+PQGGQDILS+MGQ+MKP+K
Sbjct: 209 YATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKK 268

Query: 186 TEITEKLRQEINKVVNRYIDEGIAELVP 269
           TEIT+KLR EINKVVN+YID+G+AELVP
Sbjct: 269 TEITDKLRGEINKVVNKYIDQGVAELVP 296

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>RUVB1_MOUSE (P60122) RuvB-like 1 (EC 3.6.1.-) (49-kDa TATA box-binding|
           protein-interacting protein) (49 kDa TBP-interacting
           protein) (TIP49a) (Pontin 52) (DNA helicase p50)
          Length = 456

 Score =  159 bits (403), Expect = 1e-39
 Identities = 73/88 (82%), Positives = 86/88 (97%)
 Frame = +3

Query: 6   FATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPRK 185
           +ATE+DLEAEEYVP+PKG+VHKKKEI+QDVTLHDLD ANA+PQGGQDILS+MGQ+MKP+K
Sbjct: 209 YATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKK 268

Query: 186 TEITEKLRQEINKVVNRYIDEGIAELVP 269
           TEIT+KLR EINKVVN+YID+G+AELVP
Sbjct: 269 TEITDKLRGEINKVVNKYIDQGVAELVP 296

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>RUVB1_ASHGO (Q750R1) RuvB-like helicase 1 (EC 3.6.1.-)|
          Length = 459

 Score =  159 bits (403), Expect = 1e-39
 Identities = 72/89 (80%), Positives = 86/89 (96%)
 Frame = +3

Query: 3   AFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A+ATE+DLEAEEYVP+PKGEVHKKKEI+QDVTLHDLD ANA+PQGGQD++S+MGQ+MKP+
Sbjct: 213 AYATEFDLEAEEYVPLPKGEVHKKKEIIQDVTLHDLDVANARPQGGQDVISMMGQLMKPK 272

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
           KTEITEKLR E+NKVV +YID+G+AELVP
Sbjct: 273 KTEITEKLRHEVNKVVAKYIDQGVAELVP 301

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>RUVB1_BRARE (Q8AWW7) RuvB-like 1 (EC 3.6.1.-) (Pontin) (zPontin)|
          Length = 456

 Score =  159 bits (402), Expect = 2e-39
 Identities = 73/88 (82%), Positives = 86/88 (97%)
 Frame = +3

Query: 6   FATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPRK 185
           FATE+DLEAEEYVP+PKG+VH+KKEI+QDVTLHDLD ANA+PQGGQDILS+MGQ+MKP+K
Sbjct: 209 FATEFDLEAEEYVPLPKGDVHEKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKK 268

Query: 186 TEITEKLRQEINKVVNRYIDEGIAELVP 269
           TEIT+KLR EINKVVN+YID+G+AELVP
Sbjct: 269 TEITDKLRGEINKVVNKYIDQGVAELVP 296

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>RUVB1_YEAST (Q03940) RuvB-like protein 1 (EC 3.6.1.-) (RUVBL1) (TIP49a homolog)|
           (TIP49-homology protein 1)
          Length = 463

 Score =  159 bits (401), Expect = 2e-39
 Identities = 71/89 (79%), Positives = 86/89 (96%)
 Frame = +3

Query: 3   AFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A+ATE+DLE EEYVP+PKGEVHKKKEIVQDVTLHDLD ANA+PQGGQD++S+MGQ++KP+
Sbjct: 217 AYATEFDLETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPK 276

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
           KTEITEKLRQE+NKVV +YID+G+AEL+P
Sbjct: 277 KTEITEKLRQEVNKVVAKYIDQGVAELIP 305

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>RUVB1_SCHPO (Q9C0X6) RuvB-like helicase 1 (EC 3.6.1.-)|
          Length = 456

 Score =  158 bits (400), Expect = 3e-39
 Identities = 73/89 (82%), Positives = 87/89 (97%)
 Frame = +3

Query: 3   AFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A+ATE+DLEAEEYVP+PKGEVHK+KEIVQDVTLHDLD ANA+PQGGQDI+S+MGQ+MKP+
Sbjct: 209 AYATEFDLEAEEYVPMPKGEVHKRKEIVQDVTLHDLDIANARPQGGQDIMSMMGQLMKPK 268

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
           KTEIT+KLR EINKVVN+YI++GIAEL+P
Sbjct: 269 KTEITDKLRGEINKVVNKYIEQGIAELIP 297

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>RUVB1_CANGA (Q6FU78) RuvB-like helicase 1 (EC 3.6.1.-)|
          Length = 457

 Score =  157 bits (398), Expect = 5e-39
 Identities = 71/89 (79%), Positives = 86/89 (96%)
 Frame = +3

Query: 3   AFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A+ATE+DLEAEEYVP+PKGEVHKKKEIVQDVTLHDLD ANA+PQGGQD++S+MGQ+MKP+
Sbjct: 211 AYATEFDLEAEEYVPLPKGEVHKKKEIVQDVTLHDLDIANARPQGGQDVISMMGQLMKPK 270

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
           KTEITEKLR E+NKVV +Y+D+G+AEL+P
Sbjct: 271 KTEITEKLRFEVNKVVAKYVDQGVAELIP 299

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>RUVB1_NEUCR (Q8WZS3) RuvB-like helicase 1 (EC 3.6.1.-)|
          Length = 458

 Score =  157 bits (398), Expect = 5e-39
 Identities = 73/89 (82%), Positives = 86/89 (96%)
 Frame = +3

Query: 3   AFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A+ATE+DLEAEEYVPIPKGEVHKKKEIVQDV+LHDLD ANA+PQGGQDI+S+MGQ+MKP+
Sbjct: 209 AYATEFDLEAEEYVPIPKGEVHKKKEIVQDVSLHDLDVANARPQGGQDIMSMMGQLMKPK 268

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
            TEIT+KLR EINKVV++YID+G+AELVP
Sbjct: 269 MTEITDKLRSEINKVVSKYIDQGVAELVP 297

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>RUVB1_CANAL (Q5A0W7) RuvB-like helicase 1 (EC 3.6.1.-)|
          Length = 458

 Score =  157 bits (398), Expect = 5e-39
 Identities = 71/89 (79%), Positives = 87/89 (97%)
 Frame = +3

Query: 3   AFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A+ATE+DLEAEEYVP+PKGEVHKKKEIVQDVTLHDLD ANA+PQGGQD+LS+MGQ++KP+
Sbjct: 211 AYATEFDLEAEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARPQGGQDVLSMMGQLLKPK 270

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
           KTEIT+KLR E+NKVV++YI++G+AELVP
Sbjct: 271 KTEITDKLRTEVNKVVSKYIEQGVAELVP 299

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>RUVB1_XENLA (Q9DE26) RuvB-like 1 (EC 3.6.1.-) (Pontin)|
          Length = 456

 Score =  157 bits (396), Expect = 9e-39
 Identities = 71/88 (80%), Positives = 86/88 (97%)
 Frame = +3

Query: 6   FATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPRK 185
           +ATE+DLEAEEYVP+PKG+VH+KKE++QDVTLHDLD ANA+PQGGQDILS+MGQ+MKP+K
Sbjct: 209 YATEFDLEAEEYVPLPKGDVHQKKEVIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKK 268

Query: 186 TEITEKLRQEINKVVNRYIDEGIAELVP 269
           TEIT+KLR +INKVVN+YID+GIAELVP
Sbjct: 269 TEITDKLRGQINKVVNKYIDQGIAELVP 296

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>RUVB1_GIBZE (Q4ICA8) RuvB-like helicase 1 (EC 3.6.1.-)|
          Length = 458

 Score =  155 bits (393), Expect = 2e-38
 Identities = 72/89 (80%), Positives = 86/89 (96%)
 Frame = +3

Query: 3   AFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A+ATE+DLEAEEYVPIPKGEVHKKKEIVQDV+LHDLD AN++PQGGQDI+S+MGQ+MKP+
Sbjct: 209 AYATEFDLEAEEYVPIPKGEVHKKKEIVQDVSLHDLDVANSRPQGGQDIMSMMGQLMKPK 268

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
            TEIT+KLR EINKVV++YID+G+AELVP
Sbjct: 269 MTEITDKLRGEINKVVSKYIDQGVAELVP 297

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>RUVB1_YARLI (Q6CB52) RuvB-like helicase 1 (EC 3.6.1.-)|
          Length = 453

 Score =  153 bits (387), Expect = 1e-37
 Identities = 69/89 (77%), Positives = 83/89 (93%)
 Frame = +3

Query: 3   AFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A+ATE+DLE EEYVP+PKGEVHKKKEIVQDVTLHDLD ANA+PQGGQD++S+MG +MKP+
Sbjct: 209 AYATEFDLETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARPQGGQDVMSMMGSLMKPK 268

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
           KTEIT+KLR+E+NK V  YID+G+AELVP
Sbjct: 269 KTEITDKLREEVNKKVQSYIDQGVAELVP 297

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>RUVB1_CRYNE (Q5KPZ8) RuvB-like helicase 1 (EC 3.6.1.-)|
          Length = 484

 Score =  149 bits (375), Expect = 2e-36
 Identities = 67/89 (75%), Positives = 86/89 (96%)
 Frame = +3

Query: 3   AFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A+A+EYDLEAEEYVP+PKG+VHK+KE+VQDVTLHDLD ANA+PQGGQDI+S+MGQ++K  
Sbjct: 225 AYASEYDLEAEEYVPLPKGDVHKRKELVQDVTLHDLDMANARPQGGQDIMSVMGQLVKGG 284

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
           +TE+T+KLR+EINKVV+RYI++G+AELVP
Sbjct: 285 RTEVTDKLRREINKVVDRYIEQGVAELVP 313

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>RUVB1_USTMA (Q4P112) RuvB-like helicase 1 (EC 3.6.1.-)|
          Length = 488

 Score =  148 bits (374), Expect = 3e-36
 Identities = 67/89 (75%), Positives = 86/89 (96%)
 Frame = +3

Query: 3   AFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A+ATE+DLEAEEYVP+PKGEVHK+KE+VQDVTLHDLD ANA+PQGGQDI+S++GQ++K R
Sbjct: 225 AYATEFDLEAEEYVPLPKGEVHKRKEVVQDVTLHDLDMANAKPQGGQDIMSVVGQLVKGR 284

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
           +TE+T+KLR EIN+VV++YI++GIAELVP
Sbjct: 285 RTEVTDKLRGEINRVVDKYIEQGIAELVP 313

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>RUVB2_SCHPO (O94692) RuvB-like helicase 2 (EC 3.6.1.-)|
          Length = 465

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = +3

Query: 9   ATEYDLEAEE--YVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A +YD    +  +V  P+GE+ K+KE+V  V+LHD+D  N++ QG   + S         
Sbjct: 206 ARDYDAMGADTRFVQCPQGEIQKRKEVVHTVSLHDIDVINSRTQGFLALFS-------GD 258

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
             EI  ++R++IN  V+ + +EG AE+VP
Sbjct: 259 TGEIKPEVREQINTKVSEWREEGKAEIVP 287

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>RUVB2_BRARE (P83571) RuvB-like 2 (EC 3.6.1.-) (Reptin) (zReptin)|
          Length = 463

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = +3

Query: 9   ATEYDLEAEE--YVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A +YD    +  +V  P+GE+ K+KE+V  V+LH++D  N++ QG   + S         
Sbjct: 212 ARDYDAMGAQTQFVQCPEGELQKRKEVVHTVSLHEIDVINSRTQGFLALFS-------GD 264

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
             EI  ++R++IN  V+ + +EG AE++P
Sbjct: 265 TGEIKSEVREQINAKVSEWREEGKAEIIP 293

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>RUVB2_DEBHA (Q6BSB8) RuvB-like helicase 2 (EC 3.6.1.-)|
          Length = 480

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = +3

Query: 9   ATEYDLEAEE--YVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A +YD    E  +V  P+GE+ K+KE+V  V+LH++D  N++ QG   + S         
Sbjct: 210 ARDYDAMGPETKFVQCPEGELQKRKEVVHTVSLHEIDVINSRQQGFLALFS-------GD 262

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
             EI  ++R +IN  V  + +EG AE+VP
Sbjct: 263 TGEIRSEVRDQINTKVAEWKEEGKAEIVP 291

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>RUVB2_CANAL (Q5AGZ9) RuvB-like helicase 2 (EC 3.6.1.-)|
          Length = 498

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = +3

Query: 9   ATEYDLEAEE--YVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A +YD    E  +V  P+GE+ K+KE+V  ++LH++D  N++ QG   + S         
Sbjct: 213 ARDYDAMGPETKFVQCPEGELQKRKEVVHTISLHEIDVINSRQQGFLALFS-------GD 265

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
             EI  ++R +IN  V  + +EG AE+VP
Sbjct: 266 TGEIRPEVRDQINTKVAEWKEEGKAEIVP 294

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>RUVB2_XENLA (Q9DE27) RuvB-like 2 (EC 3.6.1.-) (Reptin)|
          Length = 462

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = +3

Query: 9   ATEYDLEAEE--YVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A +YD    +  +V  P GE+ K+KE+V  V+LH++D  N++ QG   + S         
Sbjct: 211 ARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFS-------GD 263

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
             EI  ++R++IN  V  + +EG AE++P
Sbjct: 264 TGEIKSEVREQINAKVAEWREEGKAEIIP 292

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>RUVB2_MOUSE (Q9WTM5) RuvB-like 2 (EC 3.6.1.-) (p47 protein)|
          Length = 462

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = +3

Query: 9   ATEYDLEAEE--YVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A +YD    +  +V  P GE+ K+KE+V  V+LH++D  N++ QG   + S         
Sbjct: 211 ARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFS-------GD 263

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
             EI  ++R++IN  V  + +EG AE++P
Sbjct: 264 TGEIKSEVREQINAKVAEWREEGKAEIIP 292

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>RUVB2_HUMAN (Q9Y230) RuvB-like 2 (EC 3.6.1.-) (48-kDa TATA box-binding|
           protein-interacting protein) (48-kDa TBP-interacting
           protein) (TIP49b) (Repressing pontin 52) (Reptin 52) (51
           kDa erythrocyte cytosolic protein) (ECP-51)
           (TIP60-associated protein 54-
          Length = 462

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = +3

Query: 9   ATEYDLEAEE--YVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A +YD    +  +V  P GE+ K+KE+V  V+LH++D  N++ QG   + S         
Sbjct: 211 ARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFS-------GD 263

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
             EI  ++R++IN  V  + +EG AE++P
Sbjct: 264 TGEIKSEVREQINAKVAEWREEGKAEIIP 292

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>RUVB2_GIBZE (Q4I948) RuvB-like helicase 2 (EC 3.6.1.-)|
          Length = 464

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 28/78 (35%), Positives = 45/78 (57%)
 Frame = +3

Query: 36  EYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPRKTEITEKLRQE 215
           +++  P GE+ K+KE+V  VTLH++D  N++ QG   + S           EI  ++R +
Sbjct: 212 KFLQCPDGELQKRKEVVHTVTLHEIDVINSRTQGFLALFS-------GDTGEIRSEIRDQ 264

Query: 216 INKVVNRYIDEGIAELVP 269
           IN  V  + +EG AE+VP
Sbjct: 265 INTKVGEWKEEGKAEIVP 282

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>RUVB2_NEUCR (Q873C7) RuvB-like helicase 2 (EC 3.6.1.-)|
          Length = 481

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 28/78 (35%), Positives = 45/78 (57%)
 Frame = +3

Query: 36  EYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPRKTEITEKLRQE 215
           +++  P GE+ K+KE+V  VTLH++D  N++ QG   + S           EI  ++R +
Sbjct: 221 KFLQCPDGELQKRKEVVHTVTLHEIDVINSRTQGFLALFS-------GDTGEIRSEIRDQ 273

Query: 216 INKVVNRYIDEGIAELVP 269
           IN  V  + +EG AE+VP
Sbjct: 274 INTKVAEWKEEGKAEIVP 291

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>RUVB2_USTMA (Q4P6N7) RuvB-like helicase 2 (EC 3.6.1.-)|
          Length = 476

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = +3

Query: 9   ATEYDLEAEE--YVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A +YD    +  +V  P+GE+ ++K++V  V+LH++D  N++ QG   + S         
Sbjct: 207 ARDYDAMGSDTKFVQCPEGELQRRKDVVHTVSLHEIDVINSRTQGFLALFS-------GD 259

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
             EI  +LR +IN  V  + +EG AE+VP
Sbjct: 260 TGEIKPELRDQINIKVGEWREEGKAEIVP 288

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>RUVB2_YARLI (Q6C3X6) RuvB-like helicase 2 (EC 3.6.1.-)|
          Length = 424

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
 Frame = +3

Query: 3   AFATEYD-LEAE-EYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMK 176
           A A +YD L A+ ++V  P+GE+ ++KE++  V+LH++D  N++ QG   + S       
Sbjct: 164 ARARDYDALGADTKFVQCPEGELQQRKEVIHTVSLHEIDVINSRSQGFLALFS------- 216

Query: 177 PRKTEITEKLRQEINKVVNRYIDEGIAELVP 269
               EI  ++R++IN  V  + +EG AE+VP
Sbjct: 217 GDTGEIRPEVREQINTKVAEWKEEGKAEIVP 247

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>RUVB2_CANGA (Q6FSF1) RuvB-like helicase 2 (EC 3.6.1.-)|
          Length = 476

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
 Frame = +3

Query: 3   AFATEYDLEAEEY----VPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQM 170
           +FA   D +A  Y    V  P+GE+ K+K +V  V+LH++D  N++ QG    L+L    
Sbjct: 206 SFARSRDYDAMGYDTKFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQG---FLAL---- 258

Query: 171 MKPRKTEITEKLRQEINKVVNRYIDEGIAELVP 269
                 EI  ++R +IN  V  + +EG AE+VP
Sbjct: 259 FTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVP 291

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>RUVB2_KLULA (Q6CT29) RuvB-like helicase 2 (EC 3.6.1.-)|
          Length = 467

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
 Frame = +3

Query: 3   AFATEYDLEA----EEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQM 170
           +FA   D +A     ++V  P+GE+ K+K +V  V+LH++D  N++ QG    L+L    
Sbjct: 203 SFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQG---FLAL---- 255

Query: 171 MKPRKTEITEKLRQEINKVVNRYIDEGIAELVP 269
                 EI  ++R +IN  V  + +EG AE+VP
Sbjct: 256 FTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVP 288

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>RUVB2_YEAST (Q12464) RuvB-like protein 2 (EC 3.6.1.-) (RUVBL2) (TIP49b homolog)|
           (TIP49-homology protein 2)
          Length = 471

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
 Frame = +3

Query: 3   AFATEYDLEA----EEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQM 170
           +FA   D +A      +V  P+GE+ K+K +V  V+LH++D  N++ QG    L+L    
Sbjct: 205 SFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQG---FLAL---- 257

Query: 171 MKPRKTEITEKLRQEINKVVNRYIDEGIAELVP 269
                 EI  ++R +IN  V  + +EG AE+VP
Sbjct: 258 FTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVP 290

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>RUVB2_ASPFU (Q4WKH9) RuvB-like helicase 2 (EC 3.6.1.-)|
          Length = 469

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 27/78 (34%), Positives = 45/78 (57%)
 Frame = +3

Query: 36  EYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPRKTEITEKLRQE 215
           ++V  P+GE+  +KEIV  V+LH++D  N++ QG   + S           EI  ++R +
Sbjct: 221 KFVQCPEGELQVRKEIVHTVSLHEIDVINSRTQGFLALFS-------GDTGEIRSEVRDQ 273

Query: 216 INKVVNRYIDEGIAELVP 269
           IN  V  + +EG AE++P
Sbjct: 274 INTKVAEWKEEGKAEIIP 291

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>RUVB2_CRYNE (Q5KND8) RuvB-like helicase 2 (EC 3.6.1.-)|
          Length = 463

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
 Frame = +3

Query: 9   ATEYDLEAEE--YVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPR 182
           A +YD    +  +V  P GE+  +KE+V  V+LH++D  N++ QG    L+L        
Sbjct: 210 AKDYDAMGADTRFVACPDGELQTRKEVVHTVSLHEIDVINSRTQG---FLALFA----GD 262

Query: 183 KTEITEKLRQEINKVVNRYIDEGIAELVP 269
             EI  +LR +IN  V  + +EG AE+VP
Sbjct: 263 TGEIKPELRAQINGKVAEWREEGKAEIVP 291

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>RUVB2_EMENI (Q5BGK3) RuvB-like helicase 2 (EC 3.6.1.-)|
          Length = 452

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 27/78 (34%), Positives = 45/78 (57%)
 Frame = +3

Query: 36  EYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPRKTEITEKLRQE 215
           ++V  P+GE+  +KEIV  V+LH++D  N++ QG   + S           EI  ++R +
Sbjct: 205 KFVQCPEGELQVRKEIVHTVSLHEIDVINSRSQGFLALFS-------GDTGEIRSEVRDQ 257

Query: 216 INKVVNRYIDEGIAELVP 269
           IN  V  + +EG AE++P
Sbjct: 258 INVKVAEWKEEGKAEIIP 275

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>RUVB2_ASHGO (Q755G5) RuvB-like helicase 2 (EC 3.6.1.-)|
          Length = 469

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
 Frame = +3

Query: 3   AFATEYDLEA----EEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQM 170
           +FA   D +A     ++V  P+GE+ K+K +V  V+LH++D  N++ QG    L+L    
Sbjct: 204 SFARSRDYDAMGPDTKFVQCPEGELQKRKSVVHTVSLHEIDVINSRTQG---FLAL---- 256

Query: 171 MKPRKTEITEKLRQEINKVVNRYIDEGIAELVP 269
                 EI  + R +IN  V  + +EG AE+VP
Sbjct: 257 FTGDTGEIRSEDRDQINTKVAEWKEEGKAEIVP 289

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>ICAC_STAAW (Q79ZV2) Biofilm PIA synthesis protein icaC (Intercellular adhesion|
           protein C)
          Length = 350

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 152 QNILASLWLGICSVKVMQCNVLHYFFFLVDFPFGNWNILLCFKIV 18
           +N+L   W G   V +MQ  +L Y  F +++   N  ILL    +
Sbjct: 113 ENVLLGQWYGYFIVVIMQFFILSYIIFKINYNLFNSKILLLLSFI 157

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>ICAC_STAAU (Q9RQP6) Biofilm PIA synthesis protein icaC (Intercellular adhesion|
           protein C)
          Length = 350

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 152 QNILASLWLGICSVKVMQCNVLHYFFFLVDFPFGNWNILLCFKIV 18
           +N+L   W G   V +MQ  +L Y  F +++   N  ILL    +
Sbjct: 113 ENVLLGQWYGYFIVVIMQFFILSYIIFKINYNLFNSKILLLLSFI 157

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>ICAC_STAAS (Q6G605) Biofilm PIA synthesis protein icaC (Intercellular adhesion|
           protein C)
          Length = 350

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 152 QNILASLWLGICSVKVMQCNVLHYFFFLVDFPFGNWNILLCFKIV 18
           +N+L   W G   V +MQ  +L Y  F +++   N  ILL    +
Sbjct: 113 ENVLLGQWYGYFIVVIMQFFILSYIIFKINYNLFNSKILLLLSFI 157

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>ICAC_STAAR (Q6GDD5) Biofilm PIA synthesis protein icaC (Intercellular adhesion|
           protein C)
          Length = 350

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 152 QNILASLWLGICSVKVMQCNVLHYFFFLVDFPFGNWNILLCFKIV 18
           +N+L   W G   V +MQ  +L Y  F +++   N  ILL    +
Sbjct: 113 ENVLLGQWYGYFIVVIMQFFILSYIIFKINYNLFNSKILLLLSFI 157

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>ICAC_STAAN (Q7A348) Biofilm PIA synthesis protein icaC (Intercellular adhesion|
           protein C)
          Length = 350

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 152 QNILASLWLGICSVKVMQCNVLHYFFFLVDFPFGNWNILLCFKIV 18
           +N+L   W G   V +MQ  +L Y  F +++   N  ILL    +
Sbjct: 113 ENVLLGQWYGYFIVVIMQFFILSYIIFKINYNLFNSKILLLLSFI 157

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>ICAC_STAAM (Q931E4) Biofilm PIA synthesis protein icaC (Intercellular adhesion|
           protein C)
          Length = 350

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 152 QNILASLWLGICSVKVMQCNVLHYFFFLVDFPFGNWNILLCFKIV 18
           +N+L   W G   V +MQ  +L Y  F +++   N  ILL    +
Sbjct: 113 ENVLLGQWYGYFIVVIMQFFILSYIIFKINYNLFNSKILLLLSFI 157

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>MATK_OXYPI (Q5D1B9) Maturase K (Intron maturase)|
          Length = 506

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
 Frame = -1

Query: 227 HLIDLLAQLLSD----FSLPWFHHLAHKGQNILASLWLGICSVKVMQCNVLHYFFFLVDF 60
           HL+++ A+  S     F  P FH++ ++G++ILAS      +  ++     HYF  L + 
Sbjct: 253 HLVEVFAKDFSSTVTFFKDPLFHYVRYQGKSILASK-----NAPLLMNKWKHYFIHLWEC 307

Query: 59  PFGNWN 42
            F  W+
Sbjct: 308 FFDVWS 313

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>OR1L1_HUMAN (Q8NH94) Olfactory receptor 1L1 (Olfactory receptor 9-C) (OR9-C)|
          Length = 310

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = -1

Query: 260 LCNTFVDISV-NHLIDLLAQLLSDFSLPWFHHLAHKGQNILASLWLGICSVKVMQCNVLH 84
           +CN F  I++ +H   +L  +LS F +P FH L H    IL +  L  C+      NV+H
Sbjct: 126 ICNPFHYITIMSHRCCVLLLVLS-FCIPHFHSLLH----ILLTNQLIFCA-----SNVIH 175

Query: 83  YFF 75
           +FF
Sbjct: 176 HFF 178

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>GPA1_SOYBN (P49084) Guanine nucleotide-binding protein alpha-1 subunit|
           (GP-alpha-1)
          Length = 385

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
 Frame = +3

Query: 21  DLEAEEYVPIPKGEVHKKKEIVQD----VTLHDLDA-----ANAQPQGGQDILSLMGQMM 173
           + E + Y+P+    V++  +++QD    +  +D D+     +N     GQ +  + G ++
Sbjct: 69  EAELKSYIPVVHANVYQTIKVLQDGSKELAQNDFDSSKYVISNENQDIGQKLSEIGGTLV 128

Query: 174 KPRKTEITEKLRQEI 218
            PR   +T++L QEI
Sbjct: 129 YPR---LTKELAQEI 140

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>ICAC_STAEQ (Q5HKP7) Biofilm PIA synthesis protein icaC (Intercellular adhesion|
           protein C)
          Length = 355

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -1

Query: 152 QNILASLWLGICSVKVMQCNVLHYFFFLVDFPFGNWNILLCFKIV 18
           +N++   W G   + +MQ  VL Y  + ++F   N  ILL    +
Sbjct: 113 ENVVLGQWYGYFIIIIMQFFVLSYIIYKINFRLFNSKILLLLAFI 157

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>ICAC_STAEP (P69518) Biofilm PIA synthesis protein icaC (Intercellular adhesion|
           protein C)
          Length = 355

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -1

Query: 152 QNILASLWLGICSVKVMQCNVLHYFFFLVDFPFGNWNILLCFKIV 18
           +N++   W G   + +MQ  VL Y  + ++F   N  ILL    +
Sbjct: 113 ENVVLGQWYGYFIIIIMQFFVLSYIIYKINFRLFNSKILLLLAFI 157

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>CKLF6_MOUSE (Q9CZ69) CKLF-like MARVEL transmembrane domain-containing protein 6|
           (Chemokine-like factor superfamily member 6)
          Length = 183

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = -1

Query: 185 LPWFHHLAHKGQNILASLWLGICSVKVMQCNVLHYFFFLVDFPFGNWNILLCFKIVFCS 9
           LPW H    KG  +L SL   IC   V +C +    +F        + + L   IV+C+
Sbjct: 34  LPW-HRRILKGLQLLLSLLAFICEEVVSECGLCGGLYFFEFVSCSAFLLSLLLLIVYCT 91

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>CNIH4_PONPY (Q5R9M4) Cornichon homolog 4|
          Length = 139

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 128 LGICSVKVMQCNVLHYFFFLVDFPFGNWNI 39
           +G   V V+    LH+F FL++ P   WNI
Sbjct: 53  IGHTIVTVLLLMSLHWFIFLLNLPVATWNI 82

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>CNIH4_MOUSE (Q9CX13) Cornichon homolog 4|
          Length = 139

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 128 LGICSVKVMQCNVLHYFFFLVDFPFGNWNI 39
           +G   V V+    LH+F FL++ P   WNI
Sbjct: 53  VGHTIVTVLMLVSLHWFIFLLNLPVATWNI 82

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>CNIH4_HUMAN (Q9P003) Cornichon homolog 4|
          Length = 139

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 128 LGICSVKVMQCNVLHYFFFLVDFPFGNWNI 39
           +G   V V+    LH+F FL++ P   WNI
Sbjct: 53  IGHTIVTVLLLMSLHWFIFLLNLPVATWNI 82

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>MBP_HETFR (P20939) Myelin basic protein (MBP)|
          Length = 154

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 15/72 (20%), Positives = 30/72 (41%)
 Frame = +3

Query: 27  EAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPRKTEITEKL 206
           E    VP  KG+    + ++   T H    A  +      ++     MM P+K  + +K 
Sbjct: 35  EGSRKVP-EKGKEPATRSVLMAPTTHKAHQAAGRQTDDSAVVHFFKNMMSPKKAPVQQKA 93

Query: 207 RQEINKVVNRYI 242
           R   ++ + ++I
Sbjct: 94  RSGASRAITKFI 105

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>SODM_STRAI (O33603) Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) (Fragment)|
          Length = 145

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
 Frame = +3

Query: 18  YDLEAEEYVPIPKGEVHKKKEIVQDVT--LHDLDAANAQPQ-------GGQDILSLMGQM 170
           +D     YV      + K  EI +D+   L D+DA  A  +       GG    +L  ++
Sbjct: 11  HDKHHATYVANANAALEKHPEIGEDLEALLSDVDALPADIRQALINNGGGHLNHALFWEL 70

Query: 171 MKPRKTEITEKLRQEINKVVNRY 239
           + P KTEI+ +L  +I++    +
Sbjct: 71  LSPEKTEISAELAADIDETFGSF 93

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>SODM_STRAG (P0A4J5) Superoxide dismutase [Mn/Fe] (EC 1.15.1.1)|
          Length = 201

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
 Frame = +3

Query: 18  YDLEAEEYVPIPKGEVHKKKEIVQDVTL---------HDLDAANAQPQGGQDILSLMGQM 170
           +D     YV      + K  EI +D+            D+  A     GG    +L  ++
Sbjct: 27  HDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWEL 86

Query: 171 MKPRKTEITEKLRQEINKVVNRYID 245
           M P +T+I+++L ++IN     + D
Sbjct: 87  MSPEETQISQELSEDINATFGSFED 111

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>SODM_STRA5 (P0A4J4) Superoxide dismutase [Mn/Fe] (EC 1.15.1.1)|
          Length = 201

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
 Frame = +3

Query: 18  YDLEAEEYVPIPKGEVHKKKEIVQDVTL---------HDLDAANAQPQGGQDILSLMGQM 170
           +D     YV      + K  EI +D+            D+  A     GG    +L  ++
Sbjct: 27  HDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWEL 86

Query: 171 MKPRKTEITEKLRQEINKVVNRYID 245
           M P +T+I+++L ++IN     + D
Sbjct: 87  MSPEETQISQELSEDINATFGSFED 111

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>SODM_STRA3 (P0A4J3) Superoxide dismutase [Mn/Fe] (EC 1.15.1.1)|
          Length = 201

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
 Frame = +3

Query: 18  YDLEAEEYVPIPKGEVHKKKEIVQDVTL---------HDLDAANAQPQGGQDILSLMGQM 170
           +D     YV      + K  EI +D+            D+  A     GG    +L  ++
Sbjct: 27  HDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWEL 86

Query: 171 MKPRKTEITEKLRQEINKVVNRYID 245
           M P +T+I+++L ++IN     + D
Sbjct: 87  MSPEETQISQELSEDINATFGSFED 111

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>VGLG_SYNV (P27277) Spike glycoprotein precursor|
          Length = 632

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 166 WPIRDKISWPPCGWAFAASRSCSVTSCT 83
           W + +    PPCGW      SCS T  T
Sbjct: 231 WKLPNNDMSPPCGWEKTQKLSCSYTDTT 258

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>YP6A_CAEEL (Q09219) Hypothetical protein B0495.10|
          Length = 753

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +3

Query: 66  HKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPRKTEITEKLRQEINKVVNRYID 245
           H    I    T  D D AN +P  G +I SLM  ++ P   +++ + RQ+      +Y+D
Sbjct: 635 HSSSLIPDKPTEFDFDLANKRPSVGIEIPSLMPNLILP--PDLSPRPRQDRRGSDTQYLD 692

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>MATK_TRIUN (Q9XPP8) Maturase K (Intron maturase)|
          Length = 515

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
 Frame = -1

Query: 239 ISVNHLIDL----LAQLLSDFSLPWFHHLAHKGQNILAS--LWLGICSVKVMQCNVLHYF 78
           + + HLID+      ++L  F   + H++ +KG+ ILAS   +L I   K    N   Y+
Sbjct: 255 VKIEHLIDVCHNHFQKILWFFKDSFMHYVRYKGKAILASRGTYLLIKKWKCYLVNFWQYY 314

Query: 77  FFLVDFPF 54
           F     P+
Sbjct: 315 FHFWSKPY 322

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>ERCC5_XENLA (P14629) DNA-repair protein complementing XP-G cells homolog|
           (Xeroderma pigmentosum group G-complementing protein
           homolog)
          Length = 1196

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +3

Query: 21  DLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDI--LSLMGQMMKPRKTEI 194
           D+E+EE+  +P    H+    ++D T        A P+   D     L G + K    + 
Sbjct: 191 DIESEEFKSLPPEVKHEILTDMKDFTKRRRTLFEAMPEDSSDFSQYQLKGLLKKNDLNKC 250

Query: 195 TEKLRQEINK 224
            + +R+E+N+
Sbjct: 251 IDNVRKELNQ 260

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>IF2_STAS1 (Q49X54) Translation initiation factor IF-2|
          Length = 701

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +3

Query: 69  KKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPRKTEITEKLRQE 215
           K KEI+ ++   D++  +       D +  + ++ KP K E +EK +Q+
Sbjct: 16  KSKEIIHELKKMDVEVTSHMQTLEDDQIKALDKIYKPEKAEQSEKSQQK 64

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>MATK_PARTT (Q9XR19) Maturase K (Intron maturase)|
          Length = 517

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 14/80 (17%)
 Frame = -1

Query: 239 ISVNHLIDL----LAQLLSDFSLPWFHHLAHKGQNILASLWLGICSVKVMQCNVLHYFFF 72
           + + HLID+      ++L  F   + H++ +KG+ ILAS    +  +K  +C +++++ +
Sbjct: 257 VKIEHLIDVCHNHFQKILWFFKDSFMHYVRYKGKAILASRGTYLL-IKKWKCYLVNFWQY 315

Query: 71  LVDF----------PFGNWN 42
            ++F          PF N++
Sbjct: 316 NLNFWSKPYRIHINPFSNYS 335

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>UT2_HUMAN (Q15849) Urea transporter, kidney|
          Length = 397

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 139 PPCGWAFAASRSCSVTSCTISFFLWTSPLGIGTYSSASRSYSVAK 5
           PPC W F  S    +   T +  ++  PL   TY  A+R Y +++
Sbjct: 335 PPCTWPFCLSALTFLLLTTNNPAIYKLPLSKVTYPEANRIYYLSQ 379

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>CNIH4_XENTR (Q6P3N5) Cornichon homolog 4|
          Length = 139

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 128 LGICSVKVMQCNVLHYFFFLVDFPFGNWNI 39
           +G   V V+    LH+F F+++ P   WNI
Sbjct: 53  VGHTVVSVLMLVSLHWFIFILNLPVAAWNI 82

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>ATE_VIBPA (Q87QY2) Putative arginyl-tRNA--protein transferase (EC 2.3.2.8)|
           (R-transferase) (Arginyltransferase)
          Length = 233

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 128 LGICSVKVM-QCNVLHYFFFLVDFPFGNWNILLCFKIVFCSKS 3
           LG+    VM QC+   Y FF  D+P     + + +++ +C ++
Sbjct: 155 LGVAVTDVMAQCSSAFYTFFEPDYPLSLGTLAVLYQVNYCQQN 197

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>YNE2_CAEEL (P30641) Hypothetical protein R08D7.2|
          Length = 455

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
 Frame = +3

Query: 6   FATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLH-------DLDAANAQPQGGQDILSLMG 164
           F +   ++AE+ V +P  + +  KE   ++ LH       DL+A        +DILS + 
Sbjct: 320 FLSGKKVDAEKLVNLPNLDKYNVKEKRLNIFLHSIRNHWMDLEARLHLTPTRRDILSRVA 379

Query: 165 QMMKPRKTEITEKLRQEINKVV 230
              +     IT   ++EIN +V
Sbjct: 380 STFQLDSENITGWTKREINSIV 401

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>TM86B_HUMAN (Q8N661) Transmembrane protein 86B|
          Length = 226

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = -2

Query: 211 WRSFSVISVFRGFIIWPIRDKISWPPCGWAFAASRSCSVTSCTISFFLWTSPLG 50
           W S  ++S    F +W   D++SW      FAA   C    C   F    SP G
Sbjct: 24  WLSPFILSCCVYFCLWIPEDQLSW------FAALVKCLPVLCLAGFLWVMSPSG 71

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>UT2_RAT (Q62668) Urea transporter, kidney|
          Length = 397

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 139 PPCGWAFAASRSCSVTSCTISFFLWTSPLGIGTYSSASRSYSVAK 5
           PPC W F  S    +   T +  ++  PL   TY  A+R Y +++
Sbjct: 335 PPCTWPFCLSALTFLLLTTNNPGIYKLPLSKVTYPEANRIYFLSQ 379

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>TBX32_CAEEL (O61764) Putative T-box protein 32|
          Length = 545

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 21/81 (25%), Positives = 33/81 (40%)
 Frame = -1

Query: 263 KLCNTFVDISVNHLIDLLAQLLSDFSLPWFHHLAHKGQNILASLWLGICSVKVMQCNVLH 84
           K+C+   +  VN++I +       F LP FH+                         V  
Sbjct: 37  KICDHIPEFLVNNMITVFYS----FFLPDFHNF-----------------------RVFQ 69

Query: 83  YFFFLVDFPFGNWNILLCFKI 21
           YF FL++FP  + +IL  FK+
Sbjct: 70  YFSFLLNFPLRSESILSLFKL 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,696,212
Number of Sequences: 219361
Number of extensions: 821290
Number of successful extensions: 2862
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 2810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2842
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result