ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags21p18 |
|---|---|
| Clone Library Name | barley_pub |
>IWS1_MOUSE (Q8C1D8) IWS1-like protein| Length = 766 Score = 58.5 bits (140), Expect = 2e-08 Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 3/162 (1%) Frame = +1 Query: 7 RGIMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRRPQMKK 186 R +M+L K +E+ SN+ +A +L+++WSRPIF ++ ++ M R +E E+ + PQ ++ Sbjct: 606 RAVMYLYKHPKESRSNKDMAGKLINEWSRPIFGLTSNYKGMTR-EEREQRDLEQMPQRRR 664 Query: 187 PSSSRSGMEPRDD---DLDADFXXXXXXXXXXXXHASRPEASPLDFVIRPHSKIDPDQIR 357 SS+ G PR D L + A P S D+V+RP ++ + R Sbjct: 665 LSST-GGQTPRRDLEKVLTGEEKALRPGDPGFCARARVPMPSNKDYVVRPKWNVEMESSR 723 Query: 358 ARAKQQVQDQRRLKMXXXXXXXXXXXXXXXXXSKLSVEGRGM 483 +A + + RL K+S+EG M Sbjct: 724 FQASSK-KGISRLDKQMRKFTDIRKKSRSAHAVKISIEGNKM 764
>IWS1_HUMAN (Q96ST2) IWS1-like protein| Length = 819 Score = 57.4 bits (137), Expect = 4e-08 Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 3/162 (1%) Frame = +1 Query: 7 RGIMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRRPQMKK 186 R +M+L K +E+ SN+ +A +L+++WSRPIF ++ ++ M R +E E+ + PQ ++ Sbjct: 659 RAVMYLYKHPKESRSNKDMAGKLINEWSRPIFGLTSNYKGMTR-EEREQRDLEQMPQRRR 717 Query: 187 PSSSRSGMEPRDD---DLDADFXXXXXXXXXXXXHASRPEASPLDFVIRPHSKIDPDQIR 357 +S+ G PR D L + A P S D+V+RP ++ + R Sbjct: 718 MNST-GGQTPRRDLEKVLTGEEKALRPGDPGFCARARVPMPSNKDYVVRPKWNVEMESSR 776 Query: 358 ARAKQQVQDQRRLKMXXXXXXXXXXXXXXXXXSKLSVEGRGM 483 +A + + RL K+S+EG M Sbjct: 777 FQATSK-KGISRLDKQMRKFTDIRKKSRSAHAVKISIEGNKM 817
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 55.8 bits (133), Expect = 1e-07 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 5/164 (3%) Frame = +1 Query: 7 RGIMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRRPQMKK 186 R IM+L K +E+ N+ +A +L+++WSRPIF ++ ++ M R +E E+ + PQ ++ Sbjct: 676 RAIMYLYKHPKESRPNKDIAGKLINEWSRPIFGLTSNYKGMTR-EEREQRDIEQMPQRRR 734 Query: 187 PSSSRSGMEPR---DDDLDADFXXXXXXXXXXXXHASRPEASPLDFVIRP--HSKIDPDQ 351 SSS G PR D L + A P S D+V+RP + +++ Q Sbjct: 735 MSSS-GGQTPRRDLDKVLTGEEKALRPGEPGFCARARVPLPSNKDYVVRPKWNVEMETSQ 793 Query: 352 IRARAKQQVQDQRRLKMXXXXXXXXXXXXXXXXXSKLSVEGRGM 483 + AK+ V R+ K+S+EG M Sbjct: 794 YQGSAKKGVS---RIDKQMRKFVDIKKKNRFGHAVKISIEGNKM 834
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 55.5 bits (132), Expect = 1e-07 Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 3/162 (1%) Frame = +1 Query: 7 RGIMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRRPQMKK 186 R +M+L K +E+ N+ +A +L+++WSRPIF ++ ++ M R +E E+ + PQ ++ Sbjct: 749 RAVMYLYKHPKESRPNKDIAGKLINEWSRPIFGLTSNYKGMTR-EEREQRDLEQMPQRRR 807 Query: 187 PSSSRSGMEPRDD---DLDADFXXXXXXXXXXXXHASRPEASPLDFVIRPHSKIDPDQIR 357 SSS G PR D L + A P S D+V+RP ++ + R Sbjct: 808 MSSS-GGQTPRRDLEKVLTGEEKALRPGDPGFCARARVPLPSNKDYVVRPKWNVEMESAR 866 Query: 358 ARAKQQVQDQRRLKMXXXXXXXXXXXXXXXXXSKLSVEGRGM 483 + + + RL K+S+EG M Sbjct: 867 YQGSSK-KGVSRLDKQMRKFVDIKKKNRFGHAVKISIEGNKM 907
>IWS1_RAT (Q3SWT4) IWS1-like protein| Length = 764 Score = 55.5 bits (132), Expect = 1e-07 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 3/120 (2%) Frame = +1 Query: 7 RGIMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRRPQMKK 186 R +M+L K +E+ SN+ +A +L+++WSRPIF ++ ++ M R +E E+ + PQ ++ Sbjct: 605 RAVMYLYKHPKESRSNKDMAGKLINEWSRPIFGLTSNYKGMTR-EEREQRDLEQMPQRRR 663 Query: 187 PSSSRSGMEPRDD---DLDADFXXXXXXXXXXXXHASRPEASPLDFVIRPHSKIDPDQIR 357 SS+ G PR D L + A P S D+V+RP ++ + R Sbjct: 664 MSST-GGQTPRRDLEKVLTGEEKALRPGDPGFCARARVPMPSNKDYVVRPKWNVEMESSR 722
>IWS1_CAEEL (Q19375) IWS1-like protein| Length = 511 Score = 55.1 bits (131), Expect = 2e-07 Identities = 47/173 (27%), Positives = 70/173 (40%), Gaps = 14/173 (8%) Frame = +1 Query: 7 RGIMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRRPQ-MK 183 + +M L K ET N+ +A +L+ +W+RPI+ T + + R QE EE R P+ K Sbjct: 341 KAVMMLYKHPNETKENKGIANKLIGEWARPIYHLDTDYSTVSR-QEREERDYSRMPEKRK 399 Query: 184 KPSSSRSGMEPRDDD-------LDADFXXXXXX------XXXXXXHASRPEASPLDFVIR 324 K +SR EP DDD DAD A P+ S D+VIR Sbjct: 400 KKINSRDEEEPNDDDQPKRPRIRDADEMGPTKSDDLKPGDKGYIPRARVPKPSTKDYVIR 459 Query: 325 PHSKIDPDQIRARAKQQVQDQRRLKMXXXXXXXXXXXXXXXXXSKLSVEGRGM 483 P ++ + +++ R K+S+EGR M Sbjct: 460 PEWRVTG---AFKGEKKSTGNNRYDQTFRDFQERTKKSKANRIVKVSLEGRNM 509
>IWS1_CAEBR (Q61MR2) IWS1-like protein| Length = 507 Score = 52.8 bits (125), Expect = 1e-06 Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 13/172 (7%) Frame = +1 Query: 7 RGIMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRRPQMKK 186 + +M L K ET N+ +A +L+ +W+RPI+ T + + R QE EE R P+ +K Sbjct: 338 KAVMMLYKHPNETKENKAIANKLIGEWARPIYHLDTDYSTVSR-QEREERDYSRMPEKRK 396 Query: 187 PSSSRSGMEPRDDDL-------DADFXXXXXX------XXXXXXHASRPEASPLDFVIRP 327 EP +D+ DA+ A P+ S D+VIRP Sbjct: 397 KKLHSREEEPDEDEAPKRPRIRDAEGLGPTKSLDLKPGDKGYINRARVPKPSTKDYVIRP 456 Query: 328 HSKIDPDQIRARAKQQVQDQRRLKMXXXXXXXXXXXXXXXXXSKLSVEGRGM 483 ++ + + +++ +R K+S+EGR M Sbjct: 457 EWRVSGE---FKGEKKASGSKRYDQTLRDFQERTRKSKANRLVKVSLEGRNM 505
>IWS1_KLULA (Q6CVL1) Transcription factor IWS1| Length = 362 Score = 39.3 bits (90), Expect = 0.011 Identities = 24/112 (21%), Positives = 46/112 (41%) Frame = +1 Query: 7 RGIMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRRPQMKK 186 R ++F KS +LA +LV +W+RPI S + D + + + + +R+ + Sbjct: 217 RVVIFYSKSKRVEQKLARLADKLVAEWTRPIIGASDNYRDKRVLKLEFDVEKHRKKTILD 276 Query: 187 PSSSRSGMEPRDDDLDADFXXXXXXXXXXXXHASRPEASPLDFVIRPHSKID 342 + S+ R + + + A+ P + D+ P S ID Sbjct: 277 TAKSKKKRSKRMEVDEEKYKSSYEQAAARRNRAAAPAQTTTDYKYAPISNID 328
>IWS1_YEAST (Q06505) Transcription factor IWS1 (Interacts with SPT6 protein 1)| (Suppresses postrecruitment functions protein 1) Length = 410 Score = 37.4 bits (85), Expect = 0.041 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 5/125 (4%) Frame = +1 Query: 7 RGIMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRRPQM-- 180 R ++F KS +LA++L+ +W+RPI S + D + Q + ++ R+ + Sbjct: 263 RVVIFYTKSKRVEAQLARLAEKLIAEWTRPIIGASDNYRDKRIMQLEFDSEKLRKKSVMD 322 Query: 181 ---KKPSSSRSGMEPRDDDLDADFXXXXXXXXXXXXHASRPEASPLDFVIRPHSKIDPDQ 351 + S+SG +P + A+ P + D+ P S + Sbjct: 323 SAKNRKKKSKSGEDP--TSRGSSVQTLYEQAAARRNRAAAPAQTTTDYKYAPVSNLSAVP 380 Query: 352 IRARA 366 ARA Sbjct: 381 TNARA 385
>IWS1_ASPFU (Q4WSM6) Transcription factor iws1| Length = 460 Score = 36.6 bits (83), Expect = 0.071 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Frame = +1 Query: 13 IMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPP------YRRP 174 I+F KS +++A+ L+ +W+RPI Q+S + + YQE E P YR+ Sbjct: 323 IVFYTKSKRPEPGIKRMAERLLAEWTRPILQRSDDY-SKRVYQEAEYDPSPHAHKYYRKL 381 Query: 175 QMKKPSSSRSGMEPRDDDL 231 + S+ S E R +L Sbjct: 382 TTRTTSAQASVAEARSREL 400
>IWS1_CANGA (Q6FVX3) Transcription factor IWS1| Length = 382 Score = 34.3 bits (77), Expect = 0.35 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 11/77 (14%) Frame = +1 Query: 7 RGIMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRRP---- 174 R ++F KS +LA++L+ +W+RPI S + D + Q + ++ +R Sbjct: 233 RVVIFYTKSKRVEPQLARLAEKLIAEWTRPIIGASDNYRDKRIMQLEFDSEKLKRKSALD 292 Query: 175 -------QMKKPSSSRS 204 ++ KPSSS S Sbjct: 293 SAKRKKNKVSKPSSSAS 309
>IWS1_EMENI (Q5BEG5) Transcription factor iws1| Length = 429 Score = 33.9 bits (76), Expect = 0.46 Identities = 16/51 (31%), Positives = 29/51 (56%) Frame = +1 Query: 13 IMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPY 165 ++F +S +++A+ L+ +W+RPI Q+S + + YQE E P Y Sbjct: 290 VVFYTRSKRPEPGIKRMAERLLAEWTRPILQRSDDY-SKRVYQEAEFDPTY 339
>GLGB_PROMM (Q7V8B5) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 756 Score = 32.7 bits (73), Expect = 1.0 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = -1 Query: 235 HQDHRLGVPFQTYLTKAFSSEASCKGG 155 H ++R+GVP Y + F++++SC GG Sbjct: 687 HSNYRIGVPMSGYYQEVFNTDSSCYGG 713
>IWS1_GIBZE (Q4IJ11) Transcription factor IWS1| Length = 428 Score = 32.3 bits (72), Expect = 1.3 Identities = 15/64 (23%), Positives = 34/64 (53%) Frame = +1 Query: 13 IMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRRPQMKKPS 192 ++F +S + S +++A+ L+ +WSRPI ++ ++ + D + + Q +K + Sbjct: 290 VVFYTRSKKPEPSIKRIAQRLLGEWSRPILNRTDDYKKRQIETRDYDYDAAKMAQRQKTN 349 Query: 193 SSRS 204 S S Sbjct: 350 SQFS 353
>IWS1_ASHGO (Q75EH2) Transcription factor IWS1| Length = 370 Score = 32.3 bits (72), Expect = 1.3 Identities = 25/117 (21%), Positives = 43/117 (36%) Frame = +1 Query: 13 IMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRRPQMKKPS 192 ++F KS +LA LV +W+RPI S + D + + D + +R+ + Sbjct: 228 VIFYTKSKRVEHKLARLADRLVAEWTRPIIGASDNYRDKRVLKMDFDVEKHRKKAALDSA 287 Query: 193 SSRSGMEPRDDDLDADFXXXXXXXXXXXXHASRPEASPLDFVIRPHSKIDPDQIRAR 363 S+ + D + A+ P + D+ P S I Q R Sbjct: 288 KSKKRRKAAVD--EEKHKSLYELAAAKRNRAAAPAQTTTDYKYAPVSNISNVQTGIR 342
>CCNE_CAEBR (Q8MUK3) G1/S-specific cyclin-E| Length = 518 Score = 31.6 bits (70), Expect = 2.3 Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 5/109 (4%) Frame = +1 Query: 31 SDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRR-----PQMKKPSS 195 S + R L L K + P STR E + + D RR P K+PS+ Sbjct: 25 SPHDELRERLLETSLDVKENIPERSSSTRNESVGSQRSDCSESRKRRSTEKGPVAKRPST 84 Query: 196 SRSGMEPRDDDLDADFXXXXXXXXXXXXHASRPEASPLDFVIRPHSKID 342 + G RDD + F +SR PL + +D Sbjct: 85 EKKGNGSRDDSFSSVFSEDRETESSVGSTSSRTRGQPLPAMPEEEESLD 133
>IWS1_SCHPO (O42964) Transcription factor iws1| Length = 428 Score = 31.2 bits (69), Expect = 3.0 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +1 Query: 7 RGIMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFED 126 R ++F S + +++A LV +WSRPI ++S + D Sbjct: 287 RIVLFYTISKKPEPFIKRIADNLVSEWSRPIIKRSANYRD 326
>DNE23_AGRT5 (Q8U642) Error-prone DNA polymerase 3 (EC 2.7.7.7)| Length = 1087 Score = 30.8 bits (68), Expect = 3.9 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 5/126 (3%) Frame = +1 Query: 1 SARGIMFLXKSDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRRPQM 180 SA+G+MF+ DE +N + L +K R + S+ R Q + E Q+ Sbjct: 961 SAKGVMFITIEDETGPANLVVWPTLFEKRRRAVL-GSSMMAINGRIQREGEVVHLVAQQL 1019 Query: 181 KKPSSSRSGMEPRDDDLD-----ADFXXXXXXXXXXXXHASRPEASPLDFVIRPHSKIDP 345 S +G+ RD++ D S+P +P D + P ID Sbjct: 1020 FDLSGDLTGLADRDEEFKLPAGRGDEFAHGSPGSSDTRDKSKPVVAPRD-IFTPDLHIDT 1078 Query: 346 DQIRAR 363 +I++R Sbjct: 1079 LKIKSR 1084
>HATA_DICDI (P13231) Hisactophilin-1 (Histidine-rich actin-binding protein 1)| (HS I) Length = 117 Score = 30.0 bits (66), Expect = 6.6 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = -2 Query: 636 LAKKFHFHRXLLPSDGHGGRVLDTASAARWLSARHHVHCKAVGVSSLQVLDHPTAFD 466 L+ H L + HGG+V ++SA HH H VS+ + DH T F+ Sbjct: 62 LSHHLHGDHSLFHLEHHGGKVSIKGHHHHYISADHHGH-----VSTKEHHDHDTTFE 113
>EPL1_CANGA (Q6FLZ0) Enhancer of polycomb-like protein 1| Length = 821 Score = 30.0 bits (66), Expect = 6.6 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 15/76 (19%) Frame = +1 Query: 19 FLXKSDEETTSNRKLAKELVDKWSRPIFQKSTR----------FEDMK--RYQEDEEAPP 162 F D TT+N + EL++K+ + +++ +R F +K R E EE P Sbjct: 251 FTTVFDSSTTANVRPIPELIEKYGKEVYEHWSRRKIEAKGAEIFPQLKFERPGEKEEVDP 310 Query: 163 Y---RRPQMKKPSSSR 201 Y RR +++ P +R Sbjct: 311 YVCFRRRELRHPRKTR 326
>NUCL_XENLA (P20397) Nucleolin (Protein C23)| Length = 650 Score = 29.6 bits (65), Expect = 8.7 Identities = 18/70 (25%), Positives = 32/70 (45%) Frame = +1 Query: 31 SDEETTSNRKLAKELVDKWSRPIFQKSTRFEDMKRYQEDEEAPPYRRPQMKKPSSSRSGM 210 SDEE + + + V K + ++S +D + E+E+A + KKP+ + Sbjct: 95 SDEEAEDQKPIKNKPVAKKAVAKKEESEEDDDDEDESEEEKAVAKKPTPAKKPAGKKQES 154 Query: 211 EPRDDDLDAD 240 E DD+ D Sbjct: 155 EEEDDEESED 164
>SRY_MUSSI (Q62565) Sex-determining region Y protein (Testis-determining| factor) Length = 311 Score = 29.6 bits (65), Expect = 8.7 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 9/81 (11%) Frame = +1 Query: 4 ARGIMFLXKSDEETTSNRKLAKELVDKWS-------RPIFQKSTRFEDMKRYQEDEEAPP 162 +RG + N +++K+L +W RP FQ++ R + + R E+ P Sbjct: 16 SRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQEAQRLKTLHR----EKYPN 71 Query: 163 YR-RPQMKKPSSSRSG-MEPR 219 Y+ +P + S RSG ++PR Sbjct: 72 YKYQPHRRAKVSQRSGILQPR 92
>SRY_MUSSP (Q62563) Sex-determining region Y protein (Testis-determining| factor) Length = 355 Score = 29.6 bits (65), Expect = 8.7 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 9/81 (11%) Frame = +1 Query: 4 ARGIMFLXKSDEETTSNRKLAKELVDKWS-------RPIFQKSTRFEDMKRYQEDEEAPP 162 +RG + N +++K+L +W RP FQ++ R + + R E+ P Sbjct: 16 SRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQEAQRLKTLHR----EKYPN 71 Query: 163 YR-RPQMKKPSSSRSG-MEPR 219 Y+ +P + S RSG ++PR Sbjct: 72 YKYQPHRRAKVSQRSGILQPR 92 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,433,513 Number of Sequences: 219361 Number of extensions: 1853920 Number of successful extensions: 5020 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4771 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5014 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
