ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags22e20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TRPD_BACSK (Q5WGS4) Anthranilate phosphoribosyltransferase (EC 2... 29 3.7
2LOXL2_PONPY (Q5RFQ6) Lysyl oxidase homolog 2 precursor (EC 1.4.3... 28 8.3

>TRPD_BACSK (Q5WGS4) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)|
          Length = 341

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 186 DVHLCDPRPGRAHAETARFGTDDIGLP 106
           D H+ + + GR   ET RF  DD+GLP
Sbjct: 232 DTHVVEVKDGRC--ETYRFSPDDVGLP 256



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>LOXL2_PONPY (Q5RFQ6) Lysyl oxidase homolog 2 precursor (EC 1.4.3.-) (Lysyl|
           oxidase-like protein 2)
          Length = 774

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -1

Query: 221 LVQCRSRPDGH--WMCTCVI-RDLVEHTPKQLG 132
           +++CRSR DGH  WM  C I     E T K+ G
Sbjct: 729 IMKCRSRYDGHRIWMYNCHIGGSFSEETEKKFG 761


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,914,774
Number of Sequences: 219361
Number of extensions: 620134
Number of successful extensions: 1637
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1637
length of database: 80,573,946
effective HSP length: 52
effective length of database: 69,167,174
effective search space used: 1660012176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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