>HFLX_ECOLI (P25519) GTP-binding protein hflX|
          Length = 426

 Score =  110 bits (276), Expect = 2e-24
 Identities = 60/117 (51%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
 Frame = +3

Query: 6   YIGXGKVAEIRSAVQALDAETIIFDDELSAGQLRNLDKSFGGGVRVCDRTALILDIFNQR 185
           ++G GK  EI  AV+A  A  ++FD  LS  Q RNL++      RV DRT LILDIF QR
Sbjct: 57  FVGEGKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCE--CRVIDRTGLILDIFAQR 114

Query: 186 AATHEAALQVTLAQMEYQLPRLTKLWTHLERQSGG-QVKGMGEKQIEVDKRILRTQM 353
           A THE  LQV LAQ+ +   RL + WTHLERQ GG  ++G GE Q+E D+R+LR ++
Sbjct: 115 ARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRI 171



 Score = 63.2 bits (152), Expect = 5e-10
 Identities = 31/75 (41%), Positives = 51/75 (68%)
 Frame = +3

Query: 324 VDKRILRTQMKSGTEFLLTDTVGFIQKLPTMLVAAFRATLEEISESSIIVHLVDISHQLA 503
           +D  + R  +    E +L DTVGFI+ LP  LVAAF+ATL+E  ++++++H++D +    
Sbjct: 232 LDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRV 291

Query: 504 QQQIGAVDKVLKELD 548
           Q+ I AV+ VL+E+D
Sbjct: 292 QENIEAVNTVLEEID 306

>Y1126_METJA (Q58526) Hypothetical GTP-binding protein MJ1126|
          Length = 402

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 33/80 (41%), Positives = 46/80 (57%)
 Frame = +3

Query: 9   IGXGKVAEIRSAVQALDAETIIFDDELSAGQLRNLDKSFGGGVRVCDRTALILDIFNQRA 188
           IG G V  I   ++  + E +I  + L+  Q  NL K F   V V D+  L+L IF + A
Sbjct: 44  IGSGLVERIAENIKEENIEIVIVGNILTPSQKYNLAKKFK--VEVIDKIELVLRIFYKHA 101

Query: 189 ATHEAALQVTLAQMEYQLPR 248
            T EA LQV LA+++Y+LPR
Sbjct: 102 RTKEAQLQVRLAELQYELPR 121



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 20/47 (42%), Positives = 33/47 (70%)
 Frame = +3

Query: 366 EFLLTDTVGFIQKLPTMLVAAFRATLEEISESSIIVHLVDISHQLAQ 506
           + L+TDTVGFI  LP  ++ AF +T+EE ++S +I+ +VD S  + +
Sbjct: 228 KILVTDTVGFIDDLPPFMIEAFLSTIEESADSDLILIVVDASDDIEE 274

>YKC7_YEAST (P36101) Protein YKL027W|
          Length = 447

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +3

Query: 276 RQSGGQVKGMGEKQIEVDKRILRTQMKSGTEFLLTDTVGFIQKLPTMLVAA 428
           +  GGQ K   +K  + D++ +R  +K+  EFL  DT+  +     ++V A
Sbjct: 44  KNKGGQTKSDTDKYHQYDEQFIRQSLKNNVEFLGEDTIEKLSNQYVVVVGA 94

>ERA_CAUCR (P58071) GTP-binding protein era homolog|
          Length = 316

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 21/82 (25%), Positives = 35/82 (42%)
 Frame = +3

Query: 264 THLERQSGGQVKGMGEKQIEVDKRILRTQMKSGTEFLLTDTVGFIQKLPTMLVAAFRATL 443
           T + R  G +V  + +K       +    ++  T+ +L DT G       +  A  RA  
Sbjct: 25  TLVNRMVGAKVSIVTQKVQTTRFPVRGVAIEGDTQIVLVDTPGIFSPRRRLDRAMVRAAW 84

Query: 444 EEISESSIIVHLVDISHQLAQQ 509
               E+   VHLVD+  +LA +
Sbjct: 85  AGSEEAEATVHLVDVQAELASR 106

>MGA_HUMAN (O43451) Maltase-glucoamylase, intestinal [Includes: Maltase (EC|
            3.2.1.20) (Alpha-glucosidase); Glucoamylase (EC 3.2.1.3)
            (Glucan 1,4-alpha-glucosidase)]
          Length = 1856

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/48 (29%), Positives = 28/48 (58%)
 Frame = -3

Query: 149  VTNSNTSSKGLIQVTQLSSRQLIIENYSLSIKGLNCTPNFSNLPXTNI 6
            +T +N    G I++  + S  + + + S+S+ G+  TP+F+N P T +
Sbjct: 1787 ITGTNPLKLGYIEIWGVGS--VPVTSVSISVSGMVITPSFNNDPTTQV 1832

>TRME_MYCPU (Q98RJ5) tRNA modification GTPase trmE|
          Length = 442

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +3

Query: 357 SGTEFLLTDTVGFIQKLPTMLVAAFRATLEEISESSIIVHLVDISHQLAQQQIGAVDKVL 536
           +G  FLL DT G       +       + ++I +S II+HLV     L  Q     ++ +
Sbjct: 261 NGINFLLKDTAGIRHSENVIEKIGIEKSFKQIQDSEIIIHLV-----LENQDEDDFERKI 315

Query: 537 KEL 545
           KEL
Sbjct: 316 KEL 318

>ENGA_CHLTE (Q8KBK3) GTP-binding protein engA|
          Length = 437

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 360 GTEFLLTDTVGFIQKLPTMLVAAFRATLEEISESSIIVHLVD 485
           G +FLL DT G+  +  T+  A    T+  I ++  ++ +VD
Sbjct: 49  GKQFLLMDTGGYAPENDTLSKAMLEQTMRAIEDADAVIFIVD 90

>ZMPC_STRPN (Q97T80) Zinc metalloprotease zmpC precursor (EC 3.4.24.-) (MMP-9|
           protease)
          Length = 1856

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
 Frame = +3

Query: 231 EYQLPRLTKLWTHLERQSGGQVKGMGEKQIEVDKRILRTQMKSGTEFLLTDTV---GFIQ 401
           E Q P L K    +ERQ     + +  +   V+  ++ T+  S TE    + V   G + 
Sbjct: 437 EIQDPTLLKNRRKIERQGQAGTRTIQYEDYIVNGNVVETKEVSRTEVAPVNEVVKVGTLV 496

Query: 402 KLPTMLVAAFRATLEEISESSIIVHLVDIS--HQLAQQQIGAVDKVLKELDIDS 557
           K+   +       +E     ++  +L+D +  +  A+ Q+   DK++KE+DI++
Sbjct: 497 KVKPTVEITNLTKVENKKSITVSYNLIDTTSAYVSAKTQVFHGDKLVKEVDIEN 550


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,266,771
Number of Sequences: 219361
Number of extensions: 1437374
Number of successful extensions: 3891
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3889
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)