ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags21o06 |
|---|---|
| Clone Library Name | barley_pub |
>PSD6_ORYSA (Q8W425) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) Length = 389 Score = 374 bits (961), Expect = e-103 Identities = 186/204 (91%), Positives = 196/204 (96%) Frame = +2 Query: 26 LKLLKAXTVAVGQKMDLVFYTLQIGLFHMDFDLISKSVDKAKILFEEGGDWERKNRLKVY 205 LK+ + TVAVGQKMDLVF+TLQIG F+MDFDLISKS+DKAK LFEEGGDWERKNRLKVY Sbjct: 124 LKVTEGKTVAVGQKMDLVFHTLQIGFFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVY 183 Query: 206 EGLYCMATRNFKKATSLFLDSVSTFTTYELFPYDTFIFYTVLTSVITLDRVSLKQKVVDA 385 EGLYCMATRNFKKA SLFLDS+STFTTYELFPYDTFIFYTVLTSVI+LDRVSLK KVVDA Sbjct: 184 EGLYCMATRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSVISLDRVSLKAKVVDA 243 Query: 386 PEILAVIGKVPHLSEFLNSLYDCQYKSFFVAFSGLTEQIKLDRYLQPHFRYFMREVRTVV 565 PEILAVIGKVPHLSEFLNSLY+CQYKSFF AFSGLTEQIKLDRYLQPHFRY+MREVRTVV Sbjct: 244 PEILAVIGKVPHLSEFLNSLYNCQYKSFFAAFSGLTEQIKLDRYLQPHFRYYMREVRTVV 303 Query: 566 YSQFLESYKSVTMEAMAAAFGVTV 637 YSQFLESYKSVTMEAMA+AFGVTV Sbjct: 304 YSQFLESYKSVTMEAMASAFGVTV 327
>PSD6_ARATH (Q93Y35) Probable 26S proteasome non-ATPase regulatory subunit 6| Length = 387 Score = 349 bits (895), Expect = 5e-96 Identities = 168/204 (82%), Positives = 189/204 (92%) Frame = +2 Query: 26 LKLLKAXTVAVGQKMDLVFYTLQIGLFHMDFDLISKSVDKAKILFEEGGDWERKNRLKVY 205 LKL + TVAVGQKMD+VFYTLQ+ F+MDFDL+SKS+DKAK LFEEGGDWERKNRLKVY Sbjct: 122 LKLTEGKTVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKLFEEGGDWERKNRLKVY 181 Query: 206 EGLYCMATRNFKKATSLFLDSVSTFTTYELFPYDTFIFYTVLTSVITLDRVSLKQKVVDA 385 EGLYCM+TRNFKKA SLFLDS+STFTTYE+FPY+TFIFYTVLTS+ITLDRVSLKQKVVDA Sbjct: 182 EGLYCMSTRNFKKAASLFLDSISTFTTYEIFPYETFIFYTVLTSIITLDRVSLKQKVVDA 241 Query: 386 PEILAVIGKVPHLSEFLNSLYDCQYKSFFVAFSGLTEQIKLDRYLQPHFRYFMREVRTVV 565 PEIL V+GK+P LSEFLNSLY+CQYK+FF AF+G+ QIK DRYL PHFR++MREVRTVV Sbjct: 242 PEILTVLGKIPFLSEFLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMREVRTVV 301 Query: 566 YSQFLESYKSVTMEAMAAAFGVTV 637 YSQFLESYKSVT+EAMA AFGV+V Sbjct: 302 YSQFLESYKSVTVEAMAKAFGVSV 325
>PSD6_HUMAN (Q15008) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (p42A) (Proteasome regulatory particle subunit p44S10) (Phosphonoformate immuno-associated protein 4) (Breast cancer-associated protein SGA-113M) Length = 389 Score = 228 bits (582), Expect = 9e-60 Identities = 107/197 (54%), Positives = 151/197 (76%) Frame = +2 Query: 47 TVAVGQKMDLVFYTLQIGLFHMDFDLISKSVDKAKILFEEGGDWERKNRLKVYEGLYCMA 226 TVA+G ++D+VFY L+IGLF+MD DLI+++ +KAK L EEGGDW+R+NRLKVY+GLYC+A Sbjct: 131 TVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVA 190 Query: 227 TRNFKKATSLFLDSVSTFTTYELFPYDTFIFYTVLTSVITLDRVSLKQKVVDAPEILAVI 406 R+FK+A LFLD+VSTFT+YEL Y TF+ YTV S+I L+R L++KV+ EIL V+ Sbjct: 191 IRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVL 250 Query: 407 GKVPHLSEFLNSLYDCQYKSFFVAFSGLTEQIKLDRYLQPHFRYFMREVRTVVYSQFLES 586 +P + ++L SLY+C+Y FF + + + +++K D PH+RY++RE+R YSQ LES Sbjct: 251 HSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLES 310 Query: 587 YKSVTMEAMAAAFGVTV 637 Y+S+T+ MA AFGV V Sbjct: 311 YRSLTLGYMAEAFGVGV 327
>PSD6_MOUSE (Q99JI4) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (p42A) Length = 389 Score = 228 bits (581), Expect = 1e-59 Identities = 107/197 (54%), Positives = 151/197 (76%) Frame = +2 Query: 47 TVAVGQKMDLVFYTLQIGLFHMDFDLISKSVDKAKILFEEGGDWERKNRLKVYEGLYCMA 226 TVA+G ++D+VFY L+IGLF+MD DLI+++ +KAK L EEGGDW+R+NRLKVY+GLYC+A Sbjct: 131 TVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVA 190 Query: 227 TRNFKKATSLFLDSVSTFTTYELFPYDTFIFYTVLTSVITLDRVSLKQKVVDAPEILAVI 406 R+FK+A LFLD+VSTFT+YEL Y TF+ YTV S+I L+R L++KV+ EIL V+ Sbjct: 191 IRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVL 250 Query: 407 GKVPHLSEFLNSLYDCQYKSFFVAFSGLTEQIKLDRYLQPHFRYFMREVRTVVYSQFLES 586 +P + ++L SLY+C+Y FF + + + +++K D PH+RY++RE+R YSQ LES Sbjct: 251 HSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLES 310 Query: 587 YKSVTMEAMAAAFGVTV 637 Y+S+T+ MA AFGV V Sbjct: 311 YRSLTLGYMAEAFGVGV 327
>PSD6_DROME (Q9V3G7) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (Rpn7 protein) Length = 389 Score = 227 bits (579), Expect = 2e-59 Identities = 101/197 (51%), Positives = 155/197 (78%) Frame = +2 Query: 47 TVAVGQKMDLVFYTLQIGLFHMDFDLISKSVDKAKILFEEGGDWERKNRLKVYEGLYCMA 226 TV++G ++D+VF+ +++GLF++D DLI++++DKAK L EEGGDW+R+NRLKVY+G+Y +A Sbjct: 131 TVSLGHRLDIVFHLIRLGLFYLDHDLITRNIDKAKYLIEEGGDWDRRNRLKVYQGVYSVA 190 Query: 227 TRNFKKATSLFLDSVSTFTTYELFPYDTFIFYTVLTSVITLDRVSLKQKVVDAPEILAVI 406 R+FK A + FLD+VSTFT+YEL Y TF+ YTV ++I L R L+ KV+ EI V+ Sbjct: 191 VRDFKAAATFFLDTVSTFTSYELMDYPTFVRYTVYVAMIALPRNELRDKVIKGSEIQEVL 250 Query: 407 GKVPHLSEFLNSLYDCQYKSFFVAFSGLTEQIKLDRYLQPHFRYFMREVRTVVYSQFLES 586 +P + +FL SLY+CQY++F+V +G+ +Q++LD + PH+RY++RE+R + Y+Q LES Sbjct: 251 HGLPDVKQFLFSLYNCQYENFYVHLAGVEKQLRLDYLIHPHYRYYVREMRILGYTQLLES 310 Query: 587 YKSVTMEAMAAAFGVTV 637 Y+S+T++ MA +FGVTV Sbjct: 311 YRSLTLQYMAESFGVTV 327
>PSD6_CAEEL (Q20585) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit rpn-7) Length = 410 Score = 184 bits (468), Expect = 1e-46 Identities = 93/203 (45%), Positives = 130/203 (64%), Gaps = 7/203 (3%) Frame = +2 Query: 47 TVAVGQKMDLVFYTLQIGLFHMDFDLISKSVDKAKILFEEGGDWERKNRLKVYEGLYCMA 226 TV +G ++D+VF +++GLF +D LI+K + KAK L E+GGDWERKNRL+ YE LY M+ Sbjct: 145 TVGMGYRIDVVFAMIRVGLFFLDHHLINKFITKAKELMEQGGDWERKNRLRSYEALYRMS 204 Query: 227 TRNFKKATSLFLDSVSTFTTYELFPYDTFIFYTVLTSVITLDRVSLKQKVVDAPEILAVI 406 R+F A LFL++V TF +YEL Y+ I YTV+T+ LDR L+ KV+ E+ + Sbjct: 205 VRDFAGAADLFLEAVPTFGSYELMTYENLILYTVITTTFALDRPDLRTKVIRCNEVQEQL 264 Query: 407 ------GKVPHLSEFLNSLYDCQYKSFFVAFSGL-TEQIKLDRYLQPHFRYFMREVRTVV 565 G + + E+L S YDC Y FF+ + L +E+ K DRYL PHF Y+ R +R Sbjct: 265 TGGGLNGTLIPVREYLESYYDCHYDRFFIQLAALESERFKFDRYLSPHFNYYSRGMRHRA 324 Query: 566 YSQFLESYKSVTMEAMAAAFGVT 634 Y QFL YK+V ++ MA FGV+ Sbjct: 325 YEQFLTPYKTVRIDMMAKDFGVS 347
>RPN7_SCHPO (Q10335) Probable 26S proteasome regulatory subunit rpn7| Length = 409 Score = 179 bits (454), Expect = 6e-45 Identities = 85/197 (43%), Positives = 135/197 (68%), Gaps = 4/197 (2%) Frame = +2 Query: 59 GQKMDLVFYTLQIGLFHMDFDLISKSVDKAKILFEEGGDWERKNRLKVYEGLYCMATRNF 238 G K+D++F +++ + D ++ + ++K K L E+GGDWERKNRLK Y+G+Y M+ RNF Sbjct: 146 GMKIDVLFSKIRLAYVYADMRVVGQLLEKLKPLIEKGGDWERKNRLKAYQGIYLMSIRNF 205 Query: 239 KKATSLFLDSVSTFTTYELFPYDTFIFYTVLTSVITLDRVSLKQKVVDAPEILAVIGKVP 418 A L LD +STF++ EL PY + Y V++ I+LDRV +K K+VD+PE+LAV+ + Sbjct: 206 SGAADLLLDCMSTFSSTELLPYYDVVRYAVISGAISLDRVDVKTKIVDSPEVLAVLPQNE 265 Query: 419 HLSEF---LNSLYDCQYKSFFVAFSGL-TEQIKLDRYLQPHFRYFMREVRTVVYSQFLES 586 +S +NSLY C Y FF + + +K D++L H+RY++RE+R Y+Q LES Sbjct: 266 SMSSLEACINSLYLCDYSGFFRTLADVEVNHLKCDQFLVAHYRYYVREMRRRAYAQLLES 325 Query: 587 YKSVTMEAMAAAFGVTV 637 Y+++++++MAA+FGV+V Sbjct: 326 YRALSIDSMAASFGVSV 342
>RPN7_YEAST (Q06103) 26S proteasome regulatory subunit RPN7| Length = 429 Score = 158 bits (400), Expect = 1e-38 Identities = 77/200 (38%), Positives = 128/200 (64%), Gaps = 4/200 (2%) Frame = +2 Query: 50 VAVGQKMDLVFYTLQIGLFHMDFDLISKSVDKAKILFEEGGDWERKNRLKVYEGLYCMAT 229 ++ G K+D++ ++G F+ D + + ++ + E+GGDWER+NR K Y G++C+A Sbjct: 162 ISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAV 221 Query: 230 RNFKKATSLFLDSVSTFTTYELFPYDTFIFYTVLTSVITLDRVSLKQKVVDAPEILAVI- 406 RNFK+A L +DS++TFT+ EL Y++ Y +T + TL+R LK KV+D+PE+L++I Sbjct: 222 RNFKEAAKLLVDSLATFTSIELTSYESIATYASVTGLFTLERTDLKSKVIDSPELLSLIS 281 Query: 407 --GKVPHLSEFLNSLYDCQYKSFFVAFSGLTEQIKLD-RYLQPHFRYFMREVRTVVYSQF 577 + +S SLY Y S+F + + +YL H +F+RE+R VY+Q Sbjct: 282 TTAALQSISSLTISLYASDYASYFPYLLETYANVLIPCKYLNRHADFFVREMRRKVYAQL 341 Query: 578 LESYKSVTMEAMAAAFGVTV 637 LESYK++++++MA+AFGV+V Sbjct: 342 LESYKTLSLKSMASAFGVSV 361
>CSN1_RAT (P97834) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (MFH protein) Length = 471 Score = 67.4 bits (163), Expect = 3e-11 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 1/150 (0%) Frame = +2 Query: 191 RLKVYEGLYCMATRNFKKATSLFLDSVSTFTTY-ELFPYDTFIFYTVLTSVITLDRVSLK 367 +LK GL +A R +K+A FL + + EL Y L ++ T DR L+ Sbjct: 228 KLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALATFDRQELQ 287 Query: 368 QKVVDAPEILAVIGKVPHLSEFLNSLYDCQYKSFFVAFSGLTEQIKLDRYLQPHFRYFMR 547 + V+ + + P + + + Y+ +Y S + + + LD YL PH R Sbjct: 288 RNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYT 347 Query: 548 EVRTVVYSQFLESYKSVTMEAMAAAFGVTV 637 ++R Q+ Y S M MAAAF TV Sbjct: 348 QIRNRALIQYFSPYVSADMHKMAAAFNTTV 377
>CSN1_MOUSE (Q99LD4) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (GPS1 protein) Length = 471 Score = 67.4 bits (163), Expect = 3e-11 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 1/150 (0%) Frame = +2 Query: 191 RLKVYEGLYCMATRNFKKATSLFLDSVSTFTTY-ELFPYDTFIFYTVLTSVITLDRVSLK 367 +LK GL +A R +K+A FL + + EL Y L ++ T DR L+ Sbjct: 228 KLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALATFDRQELQ 287 Query: 368 QKVVDAPEILAVIGKVPHLSEFLNSLYDCQYKSFFVAFSGLTEQIKLDRYLQPHFRYFMR 547 + V+ + + P + + + Y+ +Y S + + + LD YL PH R Sbjct: 288 RNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYT 347 Query: 548 EVRTVVYSQFLESYKSVTMEAMAAAFGVTV 637 ++R Q+ Y S M MAAAF TV Sbjct: 348 QIRNRALIQYFSPYVSADMHKMAAAFNTTV 377
>CSN1_HUMAN (Q13098) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (GPS1 protein) (MFH protein) Length = 471 Score = 67.0 bits (162), Expect = 4e-11 Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 1/150 (0%) Frame = +2 Query: 191 RLKVYEGLYCMATRNFKKATS-LFLDSVSTFTTYELFPYDTFIFYTVLTSVITLDRVSLK 367 +LK GL +A R +K+A L L S EL Y L ++ T DR L+ Sbjct: 228 KLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQ 287 Query: 368 QKVVDAPEILAVIGKVPHLSEFLNSLYDCQYKSFFVAFSGLTEQIKLDRYLQPHFRYFMR 547 + V+ + + P + + + Y+ +Y S + + + LD YL PH R Sbjct: 288 RNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYT 347 Query: 548 EVRTVVYSQFLESYKSVTMEAMAAAFGVTV 637 ++R Q+ Y S M MAAAF TV Sbjct: 348 QIRNRALIQYFSPYVSADMHRMAAAFNTTV 377
>CSN1_XENLA (Q6NRT5) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| Length = 487 Score = 65.1 bits (157), Expect = 2e-10 Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 1/150 (0%) Frame = +2 Query: 191 RLKVYEGLYCMATRNFKKATSLFLDSVSTFTTY-ELFPYDTFIFYTVLTSVITLDRVSLK 367 +LK GL +A R +K+A FL + + EL Y L ++ T DR L+ Sbjct: 244 KLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALATFDRQELQ 303 Query: 368 QKVVDAPEILAVIGKVPHLSEFLNSLYDCQYKSFFVAFSGLTEQIKLDRYLQPHFRYFMR 547 + V+ + + P + + + Y+ +Y S + + + LD YL PH R Sbjct: 304 RNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEIKDNLLLDMYLAPHVRTLYT 363 Query: 548 EVRTVVYSQFLESYKSVTMEAMAAAFGVTV 637 ++R Q+ Y S M MA AF TV Sbjct: 364 QIRNRALIQYFSPYVSADMYKMATAFNTTV 393
>CSN1_DROME (Q9VVU5) COP9 signalosome complex subunit 1b (Signalosome subunit| 1b) (Dch1-2) Length = 525 Score = 56.6 bits (135), Expect = 6e-08 Identities = 41/196 (20%), Positives = 83/196 (42%), Gaps = 6/196 (3%) Frame = +2 Query: 68 MDLVFYTLQIGLFHMDFDLISKSVDKAKIL--FEEGG---DWERKNRLKVYEGLYCMATR 232 +++ +++ ++ ++ + + KA+ F EG + + RL+ GL + + Sbjct: 231 VNMCLNVIKVSIYLQNWAHVMSYISKAESTPDFAEGSKEANAQVHTRLECAAGLAELQQK 290 Query: 233 NFKKATSLFLDSVSTFTTY-ELFPYDTFIFYTVLTSVITLDRVSLKQKVVDAPEILAVIG 409 +K A FL++ + E+ Y L ++ T DR LK+ V+ + + Sbjct: 291 KYKVAAKHFLNANFDHCDFPEMISTSNVAVYGGLCALATFDRQELKRLVIASTSFKLFLE 350 Query: 410 KVPHLSEFLNSLYDCQYKSFFVAFSGLTEQIKLDRYLQPHFRYFMREVRTVVYSQFLESY 589 P L + + Y+ +Y S + + + +D Y+ PH ++R Q+ Y Sbjct: 351 LEPQLRDIIFKFYESKYASCLTLLDEIRDNLLVDMYIAPHVTTLYTKIRNRALIQYFSPY 410 Query: 590 KSVTMEAMAAAFGVTV 637 S M MA AF +V Sbjct: 411 MSADMHKMAMAFNSSV 426
>CSN1_ARATH (P45432) COP9 signalosome complex subunit 1 (CSN complex subunit 1)| (Constitutive photomorphogenesis protein 11) (FUSCA protein 6) (FUSCA6) Length = 441 Score = 56.2 bits (134), Expect = 8e-08 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 2/151 (1%) Frame = +2 Query: 191 RLKVYEGLYCMATRNFKKATSLFLD-SVSTFTTY-ELFPYDTFIFYTVLTSVITLDRVSL 364 +L+ GL + + +K A FLD + +Y E+ Y L ++ + DR L Sbjct: 216 KLRCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQDIATYGGLCALASFDRSEL 275 Query: 365 KQKVVDAPEILAVIGKVPHLSEFLNSLYDCQYKSFFVAFSGLTEQIKLDRYLQPHFRYFM 544 KQKV+D + VP + E +N Y +Y S + L + LD +L H Sbjct: 276 KQKVIDNINFRNFLELVPDVRELINDFYSSRYASCLEYLASLKSNLLLDIHLHDHVDTLY 335 Query: 545 REVRTVVYSQFLESYKSVTMEAMAAAFGVTV 637 ++R Q+ + SV + MA AF +V Sbjct: 336 DQIRKKALIQYTLPFVSVDLSRMADAFKTSV 366
>Y498_PASMU (Q9CND4) Hypothetical protein PM0498| Length = 158 Score = 33.1 bits (74), Expect = 0.72 Identities = 25/76 (32%), Positives = 40/76 (52%) Frame = +2 Query: 62 QKMDLVFYTLQIGLFHMDFDLISKSVDKAKILFEEGGDWERKNRLKVYEGLYCMATRNFK 241 Q +DL Y L I FH+D D +S ++ ILF G+++RK + K+Y + C+ F+ Sbjct: 63 QFLDLSGYELSINRFHID-DYVSNNILCQSILFL--GEFKRKWQ-KIYPDIKCVVIITFQ 118 Query: 242 KATSLFLDSVSTFTTY 289 D V F+T+ Sbjct: 119 N------DDVGRFSTF 128
>CSN2_DROME (Q94899) COP9 signalosome complex subunit 2 (Signalosome subunit 2)| (Dch2) (Alien protein) Length = 444 Score = 33.1 bits (74), Expect = 0.72 Identities = 19/82 (23%), Positives = 36/82 (43%) Frame = +2 Query: 386 PEILAVIGKVPHLSEFLNSLYDCQYKSFFVAFSGLTEQIKLDRYLQPHFRYFMREVRTVV 565 PEILA ++ +NS + F I D++++ H +R +RT V Sbjct: 307 PEILA-------MTNLVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQV 359 Query: 566 YSQFLESYKSVTMEAMAAAFGV 631 + + YK++ + +A A + Sbjct: 360 LIKLIRPYKNIAIPFIANALNI 381
>GL11_ARATH (P92998) Germin-like protein subfamily 1 member 1 precursor| Length = 217 Score = 30.4 bits (67), Expect = 4.6 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Frame = +2 Query: 257 FLDSVSTFTTYELFPYDTFIF--------YTV--LTSVITLDRVSLKQKVVDAPEILAVI 406 F+D+ T EL P +TF+F Y + ++S + + +S + + + I Sbjct: 128 FVDTSGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFI 187 Query: 407 GKVPHLSEFLNSLYD 451 K P L E L S YD Sbjct: 188 SKPPFLVEVLKSAYD 202
>OR2M2_HUMAN (Q96R28) Olfactory receptor 2M2 (OST423)| Length = 347 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/65 (29%), Positives = 31/65 (47%) Frame = +2 Query: 314 IFYTVLTSVITLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSLYDCQYKSFFVAFSGLT 493 +FYT+LT ++ SL+ K V + ++GK SE + LY + FF S Sbjct: 276 VFYTILTPMLNPLIYSLRNKEV-TRAFMKILGKGKSESELPHKLYVLLFAKFFFLISIFF 334 Query: 494 EQIKL 508 +K+ Sbjct: 335 YDVKI 339
>DUS2_BACSU (O31546) Probable tRNA-dihydrouridine synthase 2 (EC 1.-.-.-)| Length = 325 Score = 29.6 bits (65), Expect = 7.9 Identities = 10/25 (40%), Positives = 19/25 (76%) Frame = +3 Query: 561 LSIRSSLSHTRV*QWRQWLPHLV*Q 635 +S+++ L +T V +WR+WL H++ Q Sbjct: 140 VSVKTRLGYTDVDEWREWLTHILKQ 164 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,264,179 Number of Sequences: 219361 Number of extensions: 1740677 Number of successful extensions: 4091 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 4012 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4086 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
