| Clone Name | bags21o05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK059645.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C01, full insert sequence Length = 1605 Score = 561 bits (283), Expect = e-157 Identities = 484/551 (87%) Strand = Plus / Plus Query: 1 gtgagattgacagctgcttggctgcaggatcttctggcagcagggtatcggcagcctcgg 60 |||||||| || ||||| ||||||||||| ||||| |||| || || |||||||||||| Sbjct: 387 gtgagattaacggctgcctggctgcaggaccttcttgcagtgggttaccggcagcctcgg 446 Query: 61 ctcatgtcattggagattgacaggcaacgggcaaccattggggagggtgacatgaaggag 120 |||||||||||||| | ||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 447 ctcatgtcattggaaactgacaggcagcgggcaaccattggagagggtgacatgaaggaa 506 Query: 121 tttgtgcccaagaagctgccatccgtgcaccttggggttgatgaaatcggcacagtgaac 180 ||||| ||||||||||||||||| |||||| | || |||||||| || || ||||||||| Sbjct: 507 tttgtacccaagaagctgccatctgtgcacttgggagttgatgagattggtacagtgaac 566 Query: 181 tatgagattggaaatctgattaagtggcgaaagaactttggtaatgtcgtgctcatcatg 240 |||||||||||||| |||||||||||| ||||||||||||| ||||| ||| | |||||| Sbjct: 567 tatgagattggaaacctgattaagtggagaaagaactttggaaatgttgtgttgatcatg 626 Query: 241 catgttagtggacctgtagatcgtgtagccttggaatggaggctgctatatggacggata 300 ||||||||||| ||||| ||||| || | || |||||||||||||||||| |||| Sbjct: 627 catgttagtgggcctgtggatcgcacggcactcgagtggaggctgctatatggaaggatt 686 Query: 301 ttcaagaccgttatcattcttgcggagcagagcaatgcagagcttgctgttgaacgctgc 360 |||||||| |||||||| || || || |||||||| |||||||||||||||| |||||| Sbjct: 687 ttcaagacggttatcatactagctgaacagagcaacacagagcttgctgttgagcgctgc 746 Query: 361 gctctgtcacatgcatacaagtatctgcccaaggtgtttggaagatacggtggtgctgat 420 || |||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 747 gcgttgtcacatgcatacaagtttctgcccaaggtgtttgcgagatacggtggtgctgat 806 Query: 421 ggatttctcttcctccaagaccacatgattcttaattactggaaccttctgcaagccgac 480 |||||||||||||| ||||| |||||||||||||| ||||||||||| ||||| || ||| Sbjct: 807 ggatttctcttcctgcaagatcacatgattcttaactactggaacctgctgcaggctgac 866 Query: 481 aaggaaaaactctggataactgataagattgcacattcttgggttactattccactggag 540 ||||||||||| |||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 867 aaggaaaaactttggataaccaacaagattgcacattcttgggttactgttccattggag 926 Query: 541 agcaataaaga 551 | ||| ||||| Sbjct: 927 aacaacaaaga 937
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01, complete sequence Length = 164709 Score = 369 bits (186), Expect = 7e-99 Identities = 333/382 (87%) Strand = Plus / Minus Query: 1 gtgagattgacagctgcttggctgcaggatcttctggcagcagggtatcggcagcctcgg 60 |||||||| || ||||| ||||||||||| ||||| |||| || || |||||||||||| Sbjct: 19519 gtgagattaacggctgcctggctgcaggaccttcttgcagtgggttaccggcagcctcgg 19460 Query: 61 ctcatgtcattggagattgacaggcaacgggcaaccattggggagggtgacatgaaggag 120 |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 19459 ctcatgtcattggaaattgacaggcagcgggcaaccattggagagggtgacatgaaggaa 19400 Query: 121 tttgtgcccaagaagctgccatccgtgcaccttggggttgatgaaatcggcacagtgaac 180 ||||| ||||||||||||||||| |||||| | || |||||||| || || ||||||||| Sbjct: 19399 tttgtacccaagaagctgccatctgtgcacttgggagttgatgagattggtacagtgaac 19340 Query: 181 tatgagattggaaatctgattaagtggcgaaagaactttggtaatgtcgtgctcatcatg 240 |||||||||||||| |||||||||||| ||||||||||||| ||||| ||| | |||||| Sbjct: 19339 tatgagattggaaacctgattaagtggagaaagaactttggaaatgttgtgttgatcatg 19280 Query: 241 catgttagtggacctgtagatcgtgtagccttggaatggaggctgctatatggacggata 300 ||||||||||| ||||| ||||| || | || |||||||||||||||||| |||| Sbjct: 19279 catgttagtgggcctgtggatcgcacggcactcgagtggaggctgctatatggaaggatt 19220 Query: 301 ttcaagaccgttatcattcttgcggagcagagcaatgcagagcttgctgttgaacgctgc 360 |||||||| |||||||| || || || |||||||| |||||||||||||||| |||||| Sbjct: 19219 ttcaagacggttatcatactagctgaacagagcaacacagagcttgctgttgagcgctgc 19160 Query: 361 gctctgtcacatgcatacaagt 382 || |||||||||||||||||| Sbjct: 19159 gcgttgtcacatgcatacaagt 19138 Score = 161 bits (81), Expect = 3e-36 Identities = 108/117 (92%) Strand = Plus / Minus Query: 384 tctgcccaaggtgtttggaagatacggtggtgctgatggatttctcttcctccaagacca 443 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| || Sbjct: 17806 tctgcccaaggtgtttgcgagatacggtggtgctgatggatttctcttcctgcaagatca 17747 Query: 444 catgattcttaattactggaaccttctgcaagccgacaaggaaaaactctggataac 500 |||||||||||| ||||||||||| ||||| || |||||||||||||| |||||||| Sbjct: 17746 catgattcttaactactggaacctgctgcaggctgacaaggaaaaactttggataac 17690 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 506 agattgcacattcttgggttactattccactggagagcaataaaga 551 ||||||||||||||||||||||| ||||| |||||| ||| ||||| Sbjct: 17605 agattgcacattcttgggttactgttccattggagaacaacaaaga 17560
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 369 bits (186), Expect = 7e-99 Identities = 333/382 (87%) Strand = Plus / Minus Query: 1 gtgagattgacagctgcttggctgcaggatcttctggcagcagggtatcggcagcctcgg 60 |||||||| || ||||| ||||||||||| ||||| |||| || || |||||||||||| Sbjct: 18852141 gtgagattaacggctgcctggctgcaggaccttcttgcagtgggttaccggcagcctcgg 18852082 Query: 61 ctcatgtcattggagattgacaggcaacgggcaaccattggggagggtgacatgaaggag 120 |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 18852081 ctcatgtcattggaaattgacaggcagcgggcaaccattggagagggtgacatgaaggaa 18852022 Query: 121 tttgtgcccaagaagctgccatccgtgcaccttggggttgatgaaatcggcacagtgaac 180 ||||| ||||||||||||||||| |||||| | || |||||||| || || ||||||||| Sbjct: 18852021 tttgtacccaagaagctgccatctgtgcacttgggagttgatgagattggtacagtgaac 18851962 Query: 181 tatgagattggaaatctgattaagtggcgaaagaactttggtaatgtcgtgctcatcatg 240 |||||||||||||| |||||||||||| ||||||||||||| ||||| ||| | |||||| Sbjct: 18851961 tatgagattggaaacctgattaagtggagaaagaactttggaaatgttgtgttgatcatg 18851902 Query: 241 catgttagtggacctgtagatcgtgtagccttggaatggaggctgctatatggacggata 300 ||||||||||| ||||| ||||| || | || |||||||||||||||||| |||| Sbjct: 18851901 catgttagtgggcctgtggatcgcacggcactcgagtggaggctgctatatggaaggatt 18851842 Query: 301 ttcaagaccgttatcattcttgcggagcagagcaatgcagagcttgctgttgaacgctgc 360 |||||||| |||||||| || || || |||||||| |||||||||||||||| |||||| Sbjct: 18851841 ttcaagacggttatcatactagctgaacagagcaacacagagcttgctgttgagcgctgc 18851782 Query: 361 gctctgtcacatgcatacaagt 382 || |||||||||||||||||| Sbjct: 18851781 gcgttgtcacatgcatacaagt 18851760 Score = 161 bits (81), Expect = 3e-36 Identities = 108/117 (92%) Strand = Plus / Minus Query: 384 tctgcccaaggtgtttggaagatacggtggtgctgatggatttctcttcctccaagacca 443 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| || Sbjct: 18850428 tctgcccaaggtgtttgcgagatacggtggtgctgatggatttctcttcctgcaagatca 18850369 Query: 444 catgattcttaattactggaaccttctgcaagccgacaaggaaaaactctggataac 500 |||||||||||| ||||||||||| ||||| || |||||||||||||| |||||||| Sbjct: 18850368 catgattcttaactactggaacctgctgcaggctgacaaggaaaaactttggataac 18850312 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 506 agattgcacattcttgggttactattccactggagagcaataaaga 551 ||||||||||||||||||||||| ||||| |||||| ||| ||||| Sbjct: 18850227 agattgcacattcttgggttactgttccattggagaacaacaaaga 18850182
>gb|AY110932.1| Zea mays CL34612_1 mRNA sequence Length = 1215 Score = 353 bits (178), Expect = 4e-94 Identities = 330/383 (86%) Strand = Plus / Plus Query: 169 ggcacagtgaactatgagattggaaatctgattaagtggcgaaagaactttggtaatgtc 228 |||||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||| Sbjct: 18 ggcacagttaactatgagattggaaatcttattaagtggagaaagaactttggaaatgtt 77 Query: 229 gtgctcatcatgcatgttagtggacctgtagatcgtgtagccttggaatggaggctgcta 288 ||| | |||||||| |||||||| ||||| ||||| ||| | || ||||||||||| Sbjct: 78 gtgatgatcatgcacgttagtgggcctgtggatcgcacagcacttgagtggaggctgctt 137 Query: 289 tatggacggatattcaagaccgttatcattcttgcggagcagagcaatgcagagcttgct 348 |||||| |||| |||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 138 tatggaaggattttcaagacggttatcattcttgctgagcagagcaatgcagagcttgct 197 Query: 349 gttgaacgctgcgctctgtcacatgcatacaagtatctgcccaaggtgtttggaagatac 408 |||||||||||| | ||||||| || || |||||| ||||||||| | ||||||| Sbjct: 198 gttgaacgctgcacgttgtcacacgcttataagtatttgcccaaggnnnnngaaagatac 257 Query: 409 ggtggtgctgatggatttctcttcctccaagaccacatgattcttaattactggaacctt 468 ||||||||||||||||| | |||||||||||||||||| ||||||| ||||||||||| Sbjct: 258 agtggtgctgatggatttgtgttcctccaagaccacatggttcttaactactggaacctg 317 Query: 469 ctgcaagccgacaaggaaaaactctggataactgataagattgcacattcttgggttact 528 ||||||| |||||||||| || ||||| || |||||||||||||||||||||||||| Sbjct: 318 atgcaagctgacaaggaaannctttggattacaaataagattgcacattcttgggttact 377 Query: 529 attccactggagagcaataaaga 551 ||||| |||||| |||||||| Sbjct: 378 gttccattggagacgaataaaga 400
>ref|XM_864049.1| PREDICTED: Bos taurus similar to DTW domain containing 2 (LOC613362), mRNA Length = 1541 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 11 cagctgcttggctgcaggatcttctgg 37 |||||||||||||||||| |||||||| Sbjct: 99 cagctgcttggctgcaggttcttctgg 125
>ref|NM_185966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2190 Score = 44.1 bits (22), Expect = 0.48 Identities = 79/98 (80%) Strand = Plus / Plus Query: 64 atgtcattggagattgacaggcaacgggcaaccattggggagggtgacatgaaggagttt 123 ||||||||||||||||| ||| | |||| |||||||| | || |||| | ||| |||| Sbjct: 1273 atgtcattggagattgatcggccaagggcgaccattggacatggggacaagcaggtgttt 1332 Query: 124 gtgcccaagaagctgccatccgtgcaccttggggttga 161 || |||||||| ||||| |||| || ||||| ||||| Sbjct: 1333 gtccccaagaaactgcctaccgtacatcttggtgttga 1370
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.48 Identities = 79/98 (80%) Strand = Plus / Plus Query: 64 atgtcattggagattgacaggcaacgggcaaccattggggagggtgacatgaaggagttt 123 ||||||||||||||||| ||| | |||| |||||||| | || |||| | ||| |||| Sbjct: 27568669 atgtcattggagattgatcggccaagggcgaccattggacatggggacaagcaggtgttt 27568728 Query: 124 gtgcccaagaagctgccatccgtgcaccttggggttga 161 || |||||||| ||||| |||| || ||||| ||||| Sbjct: 27568729 gtccccaagaaactgcctaccgtacatcttggtgttga 27568766
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 44.1 bits (22), Expect = 0.48 Identities = 79/98 (80%) Strand = Plus / Plus Query: 64 atgtcattggagattgacaggcaacgggcaaccattggggagggtgacatgaaggagttt 123 ||||||||||||||||| ||| | |||| |||||||| | || |||| | ||| |||| Sbjct: 25662 atgtcattggagattgatcggccaagggcgaccattggacatggggacaagcaggtgttt 25721 Query: 124 gtgcccaagaagctgccatccgtgcaccttggggttga 161 || |||||||| ||||| |||| || ||||| ||||| Sbjct: 25722 gtccccaagaaactgcctaccgtacatcttggtgttga 25759
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 44.1 bits (22), Expect = 0.48 Identities = 79/98 (80%) Strand = Plus / Plus Query: 64 atgtcattggagattgacaggcaacgggcaaccattggggagggtgacatgaaggagttt 123 ||||||||||||||||| ||| | |||| |||||||| | || |||| | ||| |||| Sbjct: 132640 atgtcattggagattgatcggccaagggcgaccattggacatggggacaagcaggtgttt 132699 Query: 124 gtgcccaagaagctgccatccgtgcaccttggggttga 161 || |||||||| ||||| |||| || ||||| ||||| Sbjct: 132700 gtccccaagaaactgcctaccgtacatcttggtgttga 132737
>ref|XR_002587.1| PREDICTED: Mus musculus similar to 3-phosphoglycerate dehydrogenase (LOC383629), mRNA Length = 1664 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 caggatcttctggcagcaggg 45 ||||||||||||||||||||| Sbjct: 552 caggatcttctggcagcaggg 532
>gb|AC162904.4| Mus musculus BAC clone RP24-152H15 from chromosome 1, complete sequence Length = 147442 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 caggatcttctggcagcaggg 45 ||||||||||||||||||||| Sbjct: 49773 caggatcttctggcagcaggg 49793
>gb|AC165088.5| Mus musculus BAC clone RP23-147K12 from chromosome 5, complete sequence Length = 220877 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aggatcttctggcagcaggg 45 |||||||||||||||||||| Sbjct: 152925 aggatcttctggcagcaggg 152944
>ref|NM_029460.1| Mus musculus RIKEN cDNA 1700108E19 gene (1700108E19Rik), mRNA Length = 1144 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aggatcttctggcagcaggg 45 |||||||||||||||||||| Sbjct: 76 aggatcttctggcagcaggg 95
>gb|AC154573.2| Mus musculus BAC clone RP23-398O19 from chromosome 14, complete sequence Length = 197419 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ctatgagattggaaatctga 199 |||||||||||||||||||| Sbjct: 77213 ctatgagattggaaatctga 77194
>gb|AC108827.10| Mus musculus chromosome 7, clone RP23-147O14, complete sequence Length = 220823 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aggatcttctggcagcaggg 45 |||||||||||||||||||| Sbjct: 152925 aggatcttctggcagcaggg 152944
>ref|XR_003005.1| PREDICTED: Mus musculus similar to 3-phosphoglycerate dehydrogenase (LOC547171), mRNA Length = 1558 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 aggatcttctggcagcaggg 45 |||||||||||||||||||| Sbjct: 68 aggatcttctggcagcaggg 49
>emb|CR377220.10| Zebrafish DNA sequence from clone DKEY-279E10 in linkage group 1, complete sequence Length = 169012 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 aaagaactttggtaatgtcg 229 |||||||||||||||||||| Sbjct: 18015 aaagaactttggtaatgtcg 17996
>emb|Z92542.2|HS245G19 Human DNA sequence from clone RP1-245G19 on chromosome Xp22.11-22.2 Contains the 3' end of the CDKL5 gene for cyclin-dependent kinase-like 5, the 3' end of the RS1 gene for retinoschisis (X-linked, juvenile) 1, and a gap junction protein, alpha 2, 38kDa (connexin 38) (GJA2) pseudogene, complete sequence Length = 145538 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 cacatgattcttaattactg 461 |||||||||||||||||||| Sbjct: 75167 cacatgattcttaattactg 75148
>emb|AL713851.8| Human DNA sequence from clone RP11-526P5 on chromosome 10 Contains two novel genes and three CpG islands, complete sequence Length = 158779 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 gagcaatgcagagcttgctg 349 |||||||||||||||||||| Sbjct: 131146 gagcaatgcagagcttgctg 131127
>gb|AC164579.5| Mus musculus 6 BAC RP23-384P24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214578 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 actggagagcaataaagaag 553 |||||||||||||||||||| Sbjct: 135214 actggagagcaataaagaag 135195
>gb|AE011768.1| Xanthomonas axonopodis pv. citri str. 306, section 146 of 469 of the complete genome Length = 12907 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 gcagcagggtatcggcagcc 56 |||||||||||||||||||| Sbjct: 8586 gcagcagggtatcggcagcc 8605
>gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250218 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 actggagagcaataaagaag 553 |||||||||||||||||||| Sbjct: 63877 actggagagcaataaagaag 63858
>gb|AC015908.10| Homo sapiens chromosome 17, clone RP11-963H4, complete sequence Length = 158693 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 ggatttctcttcctccaaga 440 |||||||||||||||||||| Sbjct: 8983 ggatttctcttcctccaaga 8964
>emb|BX547997.9| Zebrafish DNA sequence from clone CH211-198F16 in linkage group 2, complete sequence Length = 175234 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ttgcggagcagagcaatgca 339 |||||||||||||||||||| Sbjct: 135465 ttgcggagcagagcaatgca 135484
>dbj|AK016194.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930562N12 product:hypothetical Periplasmic binding protein-like I structure containing protein, full insert sequence Length = 1144 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aggatcttctggcagcaggg 45 |||||||||||||||||||| Sbjct: 76 aggatcttctggcagcaggg 95
>dbj|AK030272.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933440J23 product:hypothetical protein, full insert sequence Length = 2953 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aggatcttctggcagcaggg 45 |||||||||||||||||||| Sbjct: 41 aggatcttctggcagcaggg 60
>dbj|AK007132.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700108E19 product:hypothetical Periplasmic binding protein-like I structure containing protein, full insert sequence Length = 1110 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aggatcttctggcagcaggg 45 |||||||||||||||||||| Sbjct: 63 aggatcttctggcagcaggg 82
>gb|AY172838.1| Carcharhinus plumbeus recombination activating gene 1 (RAG1) gene, partial cds; and recombination activating gene 2 (RAG2) gene, complete cds Length = 11101 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 cttgggttactattccactggaga 541 ||||||| |||||||||||||||| Sbjct: 10175 cttgggtcactattccactggaga 10198
>dbj|AP007256.1| Danio rerio DNA, clone:DKEY-188F22, complete sequence Length = 155274 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 ggataactgataagattgca 513 |||||||||||||||||||| Sbjct: 47449 ggataactgataagattgca 47430
>emb|AL806520.36| Mouse DNA sequence from clone RP23-19M23 on chromosome X, complete sequence Length = 190804 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aggatcttctggcagcaggg 45 |||||||||||||||||||| Sbjct: 22800 aggatcttctggcagcaggg 22819
>gb|AC005284.1|AC005284 Homo sapiens chromosome 17, clone hRPK.795_F_17, complete sequence Length = 192802 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 ggatttctcttcctccaaga 440 |||||||||||||||||||| Sbjct: 7012 ggatttctcttcctccaaga 7031
>emb|CT009582.3| Pan troglodytes chromosome X clone PTB-130G16 map Xq28, complete sequence Length = 195752 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 cacatgattcttaattactg 461 |||||||||||||||||||| Sbjct: 169510 cacatgattcttaattactg 169491
>gb|M14496.1|DROANTPG5 D.melanogaster Antennapedia homeotic (Antp) gene, exon 8 Length = 3170 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 atgcatgttagtggacctgtagat 261 |||||| ||||||||||||||||| Sbjct: 201 atgcattttagtggacctgtagat 224 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,656,460 Number of Sequences: 3902068 Number of extensions: 4656460 Number of successful extensions: 89889 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89778 Number of HSP's gapped (non-prelim): 110 length of query: 553 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 530 effective length of database: 17,143,297,704 effective search space: 9085947783120 effective search space used: 9085947783120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)