ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags22d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483857.1| Oryza sativa (japonica cultivar-group), mRNA 325 1e-85
2dbj|AK061692.1| Oryza sativa (japonica cultivar-group) cDNA clon... 325 1e-85
3dbj|AK067161.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
4gb|AY109581.1| Zea mays CL32255_1 mRNA sequence 168 1e-38
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
6dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
7dbj|AP006848.1| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
8ref|NM_111321.2| Arabidopsis thaliana RNA binding / nucleic acid... 90 1e-14
9gb|BT005571.1| Arabidopsis thaliana clone U50875 putative RRM-co... 90 1e-14
10dbj|AK118315.1| Arabidopsis thaliana At3g04500 mRNA for unknown ... 90 1e-14
11gb|BT012859.1| Lycopersicon esculentum clone 113947R, mRNA sequence 66 1e-07
12emb|BX824315.1|CNS0A7R6 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
13gb|AC022287.9|ATAC022287 Arabidopsis thaliana chromosome III BAC... 50 0.009
14ref|XM_636963.1| Dictyostelium discoideum ssRNA-binding protein ... 48 0.034
15emb|Y07952.1|DDSSDBP D.discoideum mRNA for ssRNA-binding protein 48 0.034
16gb|AC024610.6| Homo sapiens chromosome 17, clone RP11-17M24, com... 48 0.034
17gb|AC078907.7| Homo sapiens chromosome 17, clone RP11-160L11, co... 48 0.034
18dbj|AK115225.1| Ciona intestinalis cDNA, clone:cieg040e13, full ... 44 0.54
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.1
20ref|XM_668220.1| Plasmodium berghei strain ANKA hypothetical pro... 42 2.1
21ref|XM_673175.1| Plasmodium berghei strain ANKA glycerol-3-phosp... 42 2.1
22gb|AC155648.14| Mus musculus 6 BAC RP24-88B16 (Roswell Park Canc... 42 2.1
23gb|AC087534.8| Homo sapiens chromosome 18, clone RP11-716B20, co... 42 2.1
24gb|AC007638.8| Homo sapiens chromosome 17, clone RP11-515O17, co... 42 2.1
25gb|AC128645.5| Oryza sativa chromosome 3 BAC OSJNBb0016P23 genom... 42 2.1
26dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
27gb|AC009891.2|AC009891 Genomic Sequence for Homo sapiens clone H... 42 2.1
28emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 2.1
29emb|AL845366.6| Zebrafish DNA sequence from clone CH211-167C22 i... 42 2.1
30gb|AE001392.2| Plasmodium falciparum 3D7 chromosome 2 section 29... 40 8.4
31gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
32gb|AC158936.4| Mus musculus chromosome 3, clone RP23-235P13, com... 40 8.4
33gb|AY810567.1| Schistosoma japonicum SJCHGC03253 protein mRNA, p... 40 8.4
34gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
35gb|AC127308.3| Mus musculus BAC clone RP23-293B20 from 8, comple... 40 8.4
36gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, comple... 40 8.4
37gb|AC104884.10| Mus musculus chromosome 3, clone RP24-281E9, com... 40 8.4
38emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chro... 40 8.4
39emb|AL356321.9| Human DNA sequence from clone RP11-282M24 on chr... 40 8.4
40emb|AL354777.16| Human DNA sequence from clone RP11-33K8 on chro... 40 8.4
41gb|AC092898.15| Homo sapiens 3 BAC RP11-321A2 (Roswell Park Canc... 40 8.4
42emb|AL096788.1|SPBC582 S.pombe chromosome II cosmid c582 40 8.4
43gb|AC153566.12| Mus musculus 10 BAC RP23-5H4 (Roswell Park Cance... 40 8.4
44gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, comp... 40 8.4
45gb|AC093797.3| Homo sapiens BAC clone RP11-301L8 from 4, complet... 40 8.4
46gb|AC011008.10| Homo sapiens chromosome 8, clone RP11-177H2, com... 40 8.4
47ref|NM_001021083.1| Schizosaccharomyces pombe 972h- 19S proteaso... 40 8.4
48dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
49dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
50dbj|AP004151.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
51emb|AJ242744.1|KAE242744 Klebsiella aerogenes partial phnJ gene ... 40 8.4
52emb|AL954843.8| Zebrafish DNA sequence from clone DKEY-149K8 in ... 40 8.4
53emb|AL845280.4| Mouse DNA sequence from clone RP23-265L1 on chro... 40 8.4
54gb|U22412.1|CFU22412 Canis familiaris beta-A3/A1 crystalline gen... 40 8.4
55dbj|D89258.1| Schizosaccharomyces pombe mRNA, partial cds, clone... 40 8.4 
>ref|XM_483857.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1163

 Score =  325 bits (164), Expect = 1e-85
 Identities = 290/331 (87%), Gaps = 1/331 (0%)
 Strand = Plus / Plus

                                                                       
Query: 33  ttttgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacgg 92
           ||||| |||||||| || || ||||| |||||||| || ||||||||||| |||||||||
Sbjct: 462 ttttgtggagatctgggcaatgaagtcaatgacgacgtcctctcaaaagctttttcacgg 521

                                                                       
Query: 93  ttcccctccttcaatatggcaaaggttgttagagataagaggactggcaaaacaaaaggt 152
           |||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||||||| 
Sbjct: 522 ttcccctccttcaacatggcaagggttgttcgagataagagaactggcaaaacaaaagga 581

                                                                       
Query: 153 tatggattcgtcagtttttcaaaccctacagacctcgctgcagcaaanaaaagaaatgaa 212
           |||||||| || || |||||||||||||| ||||| |||| ||| ||  |||||||||||
Sbjct: 582 tatggatttgtgagcttttcaaaccctactgaccttgctggagc-aattaaagaaatgaa 640

                                                                       
Query: 213 tggaaagtatgttgggaatcgccctattaaattgcgtaagagcaattggaaggagaggac 272
           ||| |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 641 tgggaagtatgttgggaaccgccctattaaattgcgtaaaagcaattggaaagagaggac 700

                                                                       
Query: 273 agatgtcgaggctctacaaagacaaaagaatcatattcagaagaaacctaaaacacaaaa 332
            ||||| || |||||| ||||||| |||||||| || ||||||||||||||||  |  ||
Sbjct: 701 cgatgttgatgctctagaaagacagaagaatcacatccagaagaaacctaaaatgcccaa 760

                                          
Query: 333 gaagggtattcttcacaagtaaagctctatt 363
           |||  |||| |||||||||||||||| ||||
Sbjct: 761 gaaaagtatccttcacaagtaaagctatatt 791
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>dbj|AK061692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C04, full
           insert sequence
          Length = 1163

 Score =  325 bits (164), Expect = 1e-85
 Identities = 290/331 (87%), Gaps = 1/331 (0%)
 Strand = Plus / Plus

                                                                       
Query: 33  ttttgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacgg 92
           ||||| |||||||| || || ||||| |||||||| || ||||||||||| |||||||||
Sbjct: 462 ttttgtggagatctgggcaatgaagtcaatgacgacgtcctctcaaaagctttttcacgg 521

                                                                       
Query: 93  ttcccctccttcaatatggcaaaggttgttagagataagaggactggcaaaacaaaaggt 152
           |||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||||||| 
Sbjct: 522 ttcccctccttcaacatggcaagggttgttcgagataagagaactggcaaaacaaaagga 581

                                                                       
Query: 153 tatggattcgtcagtttttcaaaccctacagacctcgctgcagcaaanaaaagaaatgaa 212
           |||||||| || || |||||||||||||| ||||| |||| ||| ||  |||||||||||
Sbjct: 582 tatggatttgtgagcttttcaaaccctactgaccttgctggagc-aattaaagaaatgaa 640

                                                                       
Query: 213 tggaaagtatgttgggaatcgccctattaaattgcgtaagagcaattggaaggagaggac 272
           ||| |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 641 tgggaagtatgttgggaaccgccctattaaattgcgtaaaagcaattggaaagagaggac 700

                                                                       
Query: 273 agatgtcgaggctctacaaagacaaaagaatcatattcagaagaaacctaaaacacaaaa 332
            ||||| || |||||| ||||||| |||||||| || ||||||||||||||||  |  ||
Sbjct: 701 cgatgttgatgctctagaaagacagaagaatcacatccagaagaaacctaaaatgcccaa 760

                                          
Query: 333 gaagggtattcttcacaagtaaagctctatt 363
           |||  |||| |||||||||||||||| ||||
Sbjct: 761 gaaaagtatccttcacaagtaaagctatatt 791
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>dbj|AK067161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094H15, full
           insert sequence
          Length = 1018

 Score =  317 bits (160), Expect = 2e-83
 Identities = 289/331 (87%), Gaps = 1/331 (0%)
 Strand = Plus / Plus

                                                                       
Query: 33  ttttgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacgg 92
           ||||| |||||||| || || ||||| |||||||| || ||||||||||| |||||||||
Sbjct: 319 ttttgtggagatctgggcaatgaagtcaatgacgacgtcctctcaaaagctttttcacgg 378

                                                                       
Query: 93  ttcccctccttcaatatggcaaaggttgttagagataagaggactggcaaaacaaaaggt 152
           |||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||||||| 
Sbjct: 379 ttcccctccttcaacatggcaagggttgttcgagataagagaactggcaaaacaaaagga 438

                                                                       
Query: 153 tatggattcgtcagtttttcaaaccctacagacctcgctgcagcaaanaaaagaaatgaa 212
           |||||||| || || |||||||||||||| ||||| |||| ||| ||  |||||||||||
Sbjct: 439 tatggatttgtgagcttttcaaaccctactgaccttgctggagc-aattaaagaaatgaa 497

                                                                       
Query: 213 tggaaagtatgttgggaatcgccctattaaattgcgtaagagcaattggaaggagaggac 272
           ||| |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 498 tgggaagtatgttgggaaccgccctattaaattgcgtaaaagcaattggaaagagaggac 557

                                                                       
Query: 273 agatgtcgaggctctacaaagacaaaagaatcatattcagaagaaacctaaaacacaaaa 332
            ||||| || |||||| ||||||| || ||||| || ||||||||||||||||  |  ||
Sbjct: 558 cgatgttgatgctctagaaagacagaaaaatcacatccagaagaaacctaaaatgcccaa 617

                                          
Query: 333 gaagggtattcttcacaagtaaagctctatt 363
           |||  |||| |||||||||||||||| ||||
Sbjct: 618 gaaaagtatccttcacaagtaaagctatatt 648
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>gb|AY109581.1| Zea mays CL32255_1 mRNA sequence
          Length = 1255

 Score =  168 bits (85), Expect = 1e-38
 Identities = 139/157 (88%)
 Strand = Plus / Minus

                                                                       
Query: 39  ggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacggttcccc 98
           ||||||||||| |||||||||||||| |||||||| || ||||| || |||||||| || 
Sbjct: 740 ggagatctaggcaacgaagttaatgatgatgttctatccaaagcattctcacggtttcca 681

                                                                       
Query: 99  tccttcaatatggcaaaggttgttagagataagaggactggcaaaacaaaaggttatgga 158
           |||||||| ||||||| ||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 680 tccttcaacatggcaagggttgttagagataagaggactggcaagactaaaggttatgga 621

                                                
Query: 159 ttcgtcagtttttcaaaccctacagacctcgctgcag 195
           || || || |||||||||||||| ||| | |||||||
Sbjct: 620 tttgtgagcttttcaaaccctactgacttggctgcag 584



 Score =  141 bits (71), Expect = 3e-30
 Identities = 116/131 (88%)
 Strand = Plus / Minus

                                                                       
Query: 223 gttgggaatcgccctattaaattgcgtaagagcaattggaaggagaggacagatgtcgag 282
           |||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||
Sbjct: 557 gttgggaatcgccctattaaattgcgtaagagtaactggaaggagaggacagatgttgag 498

                                                                       
Query: 283 gctctacaaagacaaaagaatcatattcagaagaaacctaaaacacaaaagaagggtatt 342
           ||||| |||||||||||||||||| | || | ||| |||||||  |  |||||| || ||
Sbjct: 497 gctctgcaaagacaaaagaatcatgtccaaaggaagcctaaaattcccaagaagagtgtt 438

                      
Query: 343 cttcacaagta 353
           |||||||||||
Sbjct: 437 cttcacaagta 427
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  103 bits (52), Expect = 7e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                            
Query: 217      aagtatgttgggaatcgccctattaaattgcgtaagagcaattggaaggagaggacagat 276
                |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 28400273 aagtatgttgggaaccgccctattaaattgcgtaaaagcaattggaaagagaggaccgat 28400214

                                    
Query: 277      gtcgaggctctacaaagaca 296
                || || |||||| |||||||
Sbjct: 28400213 gttgatgctctagaaagaca 28400194



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 89/101 (88%), Gaps = 1/101 (0%)
 Strand = Plus / Minus

                                                                            
Query: 115      aggttgttagagataagaggactggcaaaacaaaaggttatggattcgtcagtttttcaa 174
                |||||||| |||||||||| ||||||||||||||||| |||||||| || || |||||||
Sbjct: 28400460 aggttgttcgagataagagaactggcaaaacaaaaggatatggatttgtgagcttttcaa 28400401

                                                         
Query: 175      accctacagacctcgctgcagcaaanaaaagaaatgaatgg 215
                ||||||| ||||| |||| ||| ||  ||||||||||||||
Sbjct: 28400400 accctactgaccttgctggagc-aattaaagaaatgaatgg 28400361



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                            
Query: 33       ttttgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacgg 92
                ||||| |||||||| || || ||||| |||||||| || ||||||||||| |||||||||
Sbjct: 28401128 ttttgtggagatctgggcaatgaagtcaatgacgacgtcctctcaaaagctttttcacgg 28401069

                                      
Query: 93       ttcccctccttcaatatggcaa 114
                |||||||||||||| |||||||
Sbjct: 28401068 ttcccctccttcaacatggcaa 28401047



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                            
Query: 299      agaatcatattcagaagaaacctaaaacacaaaagaagggtattcttcacaagtaaagct 358
                ||||||| || ||||||||||||||||  |  |||||  |||| ||||||||||||||||
Sbjct: 28400111 agaatcacatccagaagaaacctaaaatgcccaagaaaagtatccttcacaagtaaagct 28400052

                     
Query: 359      ctatt 363
                 ||||
Sbjct: 28400051 atatt 28400047
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>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0044E16
          Length = 153296

 Score =  103 bits (52), Expect = 7e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                          
Query: 217    aagtatgttgggaatcgccctattaaattgcgtaagagcaattggaaggagaggacagat 276
              |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 129079 aagtatgttgggaaccgccctattaaattgcgtaaaagcaattggaaagagaggaccgat 129020

                                  
Query: 277    gtcgaggctctacaaagaca 296
              || || |||||| |||||||
Sbjct: 129019 gttgatgctctagaaagaca 129000



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 89/101 (88%), Gaps = 1/101 (0%)
 Strand = Plus / Minus

                                                                          
Query: 115    aggttgttagagataagaggactggcaaaacaaaaggttatggattcgtcagtttttcaa 174
              |||||||| |||||||||| ||||||||||||||||| |||||||| || || |||||||
Sbjct: 129266 aggttgttcgagataagagaactggcaaaacaaaaggatatggatttgtgagcttttcaa 129207

                                                       
Query: 175    accctacagacctcgctgcagcaaanaaaagaaatgaatgg 215
              ||||||| ||||| |||| ||| ||  ||||||||||||||
Sbjct: 129206 accctactgaccttgctggagc-aattaaagaaatgaatgg 129167



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                          
Query: 33     ttttgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacgg 92
              ||||| |||||||| || || ||||| |||||||| || ||||||||||| |||||||||
Sbjct: 129934 ttttgtggagatctgggcaatgaagtcaatgacgacgtcctctcaaaagctttttcacgg 129875

                                    
Query: 93     ttcccctccttcaatatggcaa 114
              |||||||||||||| |||||||
Sbjct: 129874 ttcccctccttcaacatggcaa 129853



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                          
Query: 299    agaatcatattcagaagaaacctaaaacacaaaagaagggtattcttcacaagtaaagct 358
              ||||||| || ||||||||||||||||  |  |||||  |||| ||||||||||||||||
Sbjct: 128917 agaatcacatccagaagaaacctaaaatgcccaagaaaagtatccttcacaagtaaagct 128858

                   
Query: 359    ctatt 363
               ||||
Sbjct: 128857 atatt 128853
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>dbj|AP006848.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
            fosmid clone:OSJNOa199K18
          Length = 39582

 Score =  103 bits (52), Expect = 7e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                        
Query: 217  aagtatgttgggaatcgccctattaaattgcgtaagagcaattggaaggagaggacagat 276
            |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 5075 aagtatgttgggaaccgccctattaaattgcgtaaaagcaattggaaagagaggaccgat 5016

                                
Query: 277  gtcgaggctctacaaagaca 296
            || || |||||| |||||||
Sbjct: 5015 gttgatgctctagaaagaca 4996



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 89/101 (88%), Gaps = 1/101 (0%)
 Strand = Plus / Minus

                                                                        
Query: 115  aggttgttagagataagaggactggcaaaacaaaaggttatggattcgtcagtttttcaa 174
            |||||||| |||||||||| ||||||||||||||||| |||||||| || || |||||||
Sbjct: 5262 aggttgttcgagataagagaactggcaaaacaaaaggatatggatttgtgagcttttcaa 5203

                                                     
Query: 175  accctacagacctcgctgcagcaaanaaaagaaatgaatgg 215
            ||||||| ||||| |||| ||| ||  ||||||||||||||
Sbjct: 5202 accctactgaccttgctggagc-aattaaagaaatgaatgg 5163



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                        
Query: 33   ttttgcggagatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacgg 92
            ||||| |||||||| || || ||||| |||||||| || ||||||||||| |||||||||
Sbjct: 5930 ttttgtggagatctgggcaatgaagtcaatgacgacgtcctctcaaaagctttttcacgg 5871

                                  
Query: 93   ttcccctccttcaatatggcaa 114
            |||||||||||||| |||||||
Sbjct: 5870 ttcccctccttcaacatggcaa 5849



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 299  agaatcatattcagaagaaacctaaaacacaaaagaagggtattcttcacaagtaaagct 358
            ||||||| || ||||||||||||||||  |  |||||  |||| ||||||||||||||||
Sbjct: 4913 agaatcacatccagaagaaacctaaaatgcccaagaaaagtatccttcacaagtaaagct 4854

                 
Query: 359  ctatt 363
             ||||
Sbjct: 4853 atatt 4849
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>ref|NM_111321.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT3G04500
           mRNA, complete cds
          Length = 1094

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 156/192 (81%), Gaps = 1/192 (0%)
 Strand = Plus / Plus

                                                                       
Query: 42  gatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacggttcccctcc 101
           ||||| || |||||||| ||||| |||||||| || ||||| ||| |  | |||||| ||
Sbjct: 480 gatcttgggaacgaagtgaatgatgatgttctttccaaagcatttgctagattccccacc 539

                                                                       
Query: 102 ttcaatatggcaaaggttgttagagataagaggactggcaaaacaaaaggttatggattc 161
           ||||||||||| |||||  ||||||||||| ||||||| ||||| || |||||||| || 
Sbjct: 540 ttcaatatggccaaggtcattagagataagcggactggtaaaaccaagggttatgggttt 599

                                                                       
Query: 162 gtcagtttttcaaaccctacagacctcgctgcagcaaanaaaagaaatgaatggaaagta 221
           || ||||| | ||| ||| | || || || |||||    ||||||||||||||| |||||
Sbjct: 600 gtgagtttcttaaatcctgcggatctagcagcagc-cttaaaagaaatgaatggtaagta 658

                       
Query: 222 tgttgggaatcg 233
           |||||| |||||
Sbjct: 659 tgttggaaatcg 670
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>gb|BT005571.1| Arabidopsis thaliana clone U50875 putative RRM-containing protein
           (At3g04500) mRNA, complete cds
          Length = 769

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 156/192 (81%), Gaps = 1/192 (0%)
 Strand = Plus / Plus

                                                                       
Query: 42  gatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacggttcccctcc 101
           ||||| || |||||||| ||||| |||||||| || ||||| ||| |  | |||||| ||
Sbjct: 427 gatcttgggaacgaagtgaatgatgatgttctttccaaagcatttgctagattccccacc 486

                                                                       
Query: 102 ttcaatatggcaaaggttgttagagataagaggactggcaaaacaaaaggttatggattc 161
           ||||||||||| |||||  ||||||||||| ||||||| ||||| || |||||||| || 
Sbjct: 487 ttcaatatggccaaggtcattagagataagcggactggtaaaaccaagggttatgggttt 546

                                                                       
Query: 162 gtcagtttttcaaaccctacagacctcgctgcagcaaanaaaagaaatgaatggaaagta 221
           || ||||| | ||| ||| | || || || |||||    ||||||||||||||| |||||
Sbjct: 547 gtgagtttcttaaatcctgcggatctagcagcagc-cttaaaagaaatgaatggtaagta 605

                       
Query: 222 tgttgggaatcg 233
           |||||| |||||
Sbjct: 606 tgttggaaatcg 617
to top
>dbj|AK118315.1| Arabidopsis thaliana At3g04500 mRNA for unknown protein, complete
           cds, clone: RAFL19-59-K02
          Length = 1095

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 156/192 (81%), Gaps = 1/192 (0%)
 Strand = Plus / Plus

                                                                       
Query: 42  gatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacggttcccctcc 101
           ||||| || |||||||| ||||| |||||||| || ||||| ||| |  | |||||| ||
Sbjct: 480 gatcttgggaacgaagtgaatgatgatgttctttccaaagcatttgctagattccccacc 539

                                                                       
Query: 102 ttcaatatggcaaaggttgttagagataagaggactggcaaaacaaaaggttatggattc 161
           ||||||||||| |||||  ||||||||||| ||||||| ||||| || |||||||| || 
Sbjct: 540 ttcaatatggccaaggtcattagagataagcggactggtaaaaccaagggttatgggttt 599

                                                                       
Query: 162 gtcagtttttcaaaccctacagacctcgctgcagcaaanaaaagaaatgaatggaaagta 221
           || ||||| | ||| ||| | || || || |||||    ||||||||||||||| |||||
Sbjct: 600 gtgagtttcttaaatcctgcggatctagcagcagc-cttaaaagaaatgaatggtaagta 658

                       
Query: 222 tgttgggaatcg 233
           |||||| |||||
Sbjct: 659 tgttggaaatcg 670
to top
>gb|BT012859.1| Lycopersicon esculentum clone 113947R, mRNA sequence
          Length = 1178

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 147/184 (79%), Gaps = 1/184 (0%)
 Strand = Plus / Plus

                                                                       
Query: 60  aatgacgatgttctctcaaaagccttttcacggttcccctccttcaatatggcaaaggtt 119
           ||||| ||||| || ||||||||||||||| |||| ||  | || |||||||| ||||||
Sbjct: 513 aatgatgatgtcctatcaaaagccttttcaaggtttccaacttttaatatggctaaggtt 572

                                                                       
Query: 120 gttagagataagaggactggcaaaacaaaaggttatggattcgtcagtttttcaaaccct 179
           || ||||| ||| ||||||| || || |  || |||||||| || |||||||| || || 
Sbjct: 573 gtaagagacaagcggactggtaagaccaggggatatggatttgtgagtttttccaatcca 632

                                                                       
Query: 180 acagacctcgctgcagcaaanaaaagaaatgaatggaaagtatgttgggaatcgccctat 239
              || || ||||| |||   |||| |||||||||||||||||||||| || || |||||
Sbjct: 633 ttggatcttgctgcggcacttaaaa-aaatgaatggaaagtatgttggtaaccggcctat 691

               
Query: 240 taaa 243
           ||||
Sbjct: 692 taaa 695
to top
>emb|BX824315.1|CNS0A7R6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH39ZE10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 943

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 92/113 (81%), Gaps = 1/113 (0%)
 Strand = Plus / Plus

                                                                       
Query: 121 ttagagataagaggactggcaaaacaaaaggttatggattcgtcagtttttcaaacccta 180
           ||||||||||| ||||||| ||||| || |||||||| || || ||||| | ||| ||| 
Sbjct: 635 ttagagataagcggactggtaaaaccaagggttatgggtttgtgagtttcttaaatcctg 694

                                                                
Query: 181 cagacctcgctgcagcaaanaaaagaaatgaatggaaagtatgttgggaatcg 233
           | || || || |||||    ||||||||||||||| ||||||||||| |||||
Sbjct: 695 cggatctagcagcagcct-taaaagaaatgaatggtaagtatgttggaaatcg 746



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 42  gatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacggttcccctcc 101
           ||||| || |||||||| ||||| |||||||| || ||||| ||| |  | |||||| ||
Sbjct: 387 gatcttgggaacgaagtgaatgatgatgttctttccaaagcatttgctagattccccacc 446

                      
Query: 102 ttcaatatggc 112
           |||||||||||
Sbjct: 447 ttcaatatggc 457
to top
>gb|AC022287.9|ATAC022287 Arabidopsis thaliana chromosome III BAC T27C4 genomic sequence,
             complete sequence
          Length = 71616

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                         
Query: 42    gatctaggtaacgaagttaatgacgatgttctctcaaaagccttttcacggttcccctcc 101
             ||||| || |||||||| ||||| |||||||| || ||||| ||| |  | |||||| ||
Sbjct: 57745 gatcttgggaacgaagtgaatgatgatgttctttccaaagcatttgctagattccccacc 57686

                              
Query: 102   ttcaatatggcaaaggt 118
             ||||||||||| |||||
Sbjct: 57685 ttcaatatggccaaggt 57669



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 121   ttagagataagaggactggcaaaacaaaaggttatgg 157
             ||||||||||| ||||||| ||||| || ||||||||
Sbjct: 57399 ttagagataagcggactggtaaaaccaagggttatgg 57363
to top
>ref|XM_636963.1| Dictyostelium discoideum ssRNA-binding protein (DDB0214897),
           partial mRNA
          Length = 861

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 207 aatgaatggaaagtatgttgggaatcgccctattaaattgcgtaagagcaattggaagga 266
           |||||||||||| ||| |||| ||||| || |||||||| ||||| || || ||||||||
Sbjct: 777 aatgaatggaaaatatattggtaatcgtccaattaaattacgtaaaagtaaatggaagga 836
to top
>emb|Y07952.1|DDSSDBP D.discoideum mRNA for ssRNA-binding protein
          Length = 1007

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 207 aatgaatggaaagtatgttgggaatcgccctattaaattgcgtaagagcaattggaagga 266
           |||||||||||| ||| |||| ||||| || |||||||| ||||| || || ||||||||
Sbjct: 809 aatgaatggaaaatatattggtaatcgtccaattaaattacgtaaaagtaaatggaagga 868
to top
>gb|AC024610.6| Homo sapiens chromosome 17, clone RP11-17M24, complete sequence
          Length = 176291

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 409    atgaaggacatctgaaagatacat 432
              ||||||||||||||||||||||||
Sbjct: 168529 atgaaggacatctgaaagatacat 168506
to top
>gb|AC078907.7| Homo sapiens chromosome 17, clone RP11-160L11, complete sequence
          Length = 104234

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 409   atgaaggacatctgaaagatacat 432
             ||||||||||||||||||||||||
Sbjct: 58116 atgaaggacatctgaaagatacat 58139
to top
>dbj|AK115225.1| Ciona intestinalis cDNA, clone:cieg040e13, full insert sequence
          Length = 1713

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 251  agagcaattggaaggagaggacagat 276
            |||||||||||||| |||||||||||
Sbjct: 1085 agagcaattggaagaagaggacagat 1110
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 568      agtgtttcttgtattaataat 588
                |||||||||||||||||||||
Sbjct: 21089042 agtgtttcttgtattaataat 21089022
to top
>ref|XM_668220.1| Plasmodium berghei strain ANKA hypothetical protein (PB300543.00.0)
           partial mRNA
          Length = 771

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 511 aatgttctgttctatctgggt 531
           |||||||||||||||||||||
Sbjct: 131 aatgttctgttctatctgggt 151
to top
>ref|XM_673175.1| Plasmodium berghei strain ANKA glycerol-3-phosphate dehydrogenase
           (PB000629.01.0) partial mRNA
          Length = 1056

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 511 aatgttctgttctatctgggt 531
           |||||||||||||||||||||
Sbjct: 419 aatgttctgttctatctgggt 439
to top
>gb|AC155648.14| Mus musculus 6 BAC RP24-88B16 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 199446

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 259   tggaaggagaggacagatgtc 279
             |||||||||||||||||||||
Sbjct: 22894 tggaaggagaggacagatgtc 22914
to top
>gb|AC087534.8| Homo sapiens chromosome 18, clone RP11-716B20, complete sequence
          Length = 176966

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 542   tttttacatttgcaagagttacaat 566
             |||||| ||||||||||||||||||
Sbjct: 68047 tttttatatttgcaagagttacaat 68071
to top
>gb|AC007638.8| Homo sapiens chromosome 17, clone RP11-515O17, complete sequence
          Length = 182051

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 311    agaagaaacctaaaacacaaa 331
              |||||||||||||||||||||
Sbjct: 123320 agaagaaacctaaaacacaaa 123340
to top
>gb|AC128645.5| Oryza sativa chromosome 3 BAC OSJNBb0016P23 genomic sequence, complete
             sequence
          Length = 131250

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 568   agtgtttcttgtattaataat 588
             |||||||||||||||||||||
Sbjct: 66798 agtgtttcttgtattaataat 66778
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 568      agtgtttcttgtattaataat 588
                |||||||||||||||||||||
Sbjct: 21082071 agtgtttcttgtattaataat 21082051
to top
>gb|AC009891.2|AC009891 Genomic Sequence for Homo sapiens clone H_NH0332F09, Chromosome 18,
             complete sequence
          Length = 194673

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 542   tttttacatttgcaagagttacaat 566
             |||||| ||||||||||||||||||
Sbjct: 66948 tttttatatttgcaagagttacaat 66924
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 433     gggctgttcagtcttacagca 453
               |||||||||||||||||||||
Sbjct: 1512559 gggctgttcagtcttacagca 1512539
to top
>emb|AL845366.6| Zebrafish DNA sequence from clone CH211-167C22 in linkage group 20,
            complete sequence
          Length = 149189

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 355  agctctattgggttgtaccgg 375
            |||||||||||||||||||||
Sbjct: 8096 agctctattgggttgtaccgg 8076
to top
>gb|AE001392.2| Plasmodium falciparum 3D7 chromosome 2 section 29 of 73 of the
            complete sequence
          Length = 11609

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 305  atattcagaagaaacctaaaacacaaaa 332
            ||||||| | ||||||||||||||||||
Sbjct: 1661 atattcatatgaaacctaaaacacaaaa 1688
to top
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08,
            complete sequence
          Length = 94286

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  caaaggttgttagagataag 131
            ||||||||||||||||||||
Sbjct: 9221 caaaggttgttagagataag 9240
to top
>gb|AC158936.4| Mus musculus chromosome 3, clone RP23-235P13, complete sequence
          Length = 160709

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 312   gaagaaacctaaaacacaaaagaa 335
             |||||||||||||| |||||||||
Sbjct: 18028 gaagaaacctaaaaaacaaaagaa 18051
to top
>gb|AY810567.1| Schistosoma japonicum SJCHGC03253 protein mRNA, partial cds
          Length = 643

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 205 gaaatgaatggaaagtatgttgggaatcgccc 236
           ||||||||||| ||||||||||| || |||||
Sbjct: 354 gaaatgaatggtaagtatgttggtaaccgccc 385
to top
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0016G07, complete sequence
          Length = 123167

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   caaaggttgttagagataag 131
             ||||||||||||||||||||
Sbjct: 76122 caaaggttgttagagataag 76141
to top
>gb|AC127308.3| Mus musculus BAC clone RP23-293B20 from 8, complete sequence
          Length = 211878

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   ttacaatgagtgtttcttgt 579
             ||||||||||||||||||||
Sbjct: 51127 ttacaatgagtgtttcttgt 51146
to top
>gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, complete sequence
          Length = 182686

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     tctctcaaaagccttttcac 90
              ||||||||||||||||||||
Sbjct: 156225 tctctcaaaagccttttcac 156206
to top
>gb|AC104884.10| Mus musculus chromosome 3, clone RP24-281E9, complete sequence
          Length = 168622

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 312    gaagaaacctaaaacacaaaagaa 335
              |||||||||||||| |||||||||
Sbjct: 163243 gaagaaacctaaaaaacaaaagaa 163220
to top
>emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chromosome 10 Contains part
             of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin
             G) and a novel gene, complete sequence
          Length = 145136

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 296   aaaagaatcatattcagaagaaac 319
             ||||| ||||||||||||||||||
Sbjct: 66282 aaaagtatcatattcagaagaaac 66305
to top
>emb|AL356321.9| Human DNA sequence from clone RP11-282M24 on chromosome 13, complete
              sequence
          Length = 162441

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    ggctctacaaagacaaaaga 301
              ||||||||||||||||||||
Sbjct: 110709 ggctctacaaagacaaaaga 110690
to top
>emb|AL354777.16| Human DNA sequence from clone RP11-33K8 on chromosome 9, complete
              sequence
          Length = 152748

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 202    aaagaaatgaatggaaagtatgtt 225
              |||||||| |||||||||||||||
Sbjct: 136983 aaagaaattaatggaaagtatgtt 136960
to top
>gb|AC092898.15| Homo sapiens 3 BAC RP11-321A2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 122934

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   tacaaagacaaaagaatcat 306
             ||||||||||||||||||||
Sbjct: 81447 tacaaagacaaaagaatcat 81466
to top
>emb|AL096788.1|SPBC582 S.pombe chromosome II cosmid c582
          Length = 27999

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 582   taataatcagctttgttttt 601
             ||||||||||||||||||||
Sbjct: 15425 taataatcagctttgttttt 15444
to top
>gb|AC153566.12| Mus musculus 10 BAC RP23-5H4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208610

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     tctctcaaaagccttttcac 90
              ||||||||||||||||||||
Sbjct: 185146 tctctcaaaagccttttcac 185165
to top
>gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, complete sequence
          Length = 157442

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 300    gaatcatattcagaagaaacctaa 323
              |||||| |||||||||||||||||
Sbjct: 153501 gaatcagattcagaagaaacctaa 153524
to top
>gb|AC093797.3| Homo sapiens BAC clone RP11-301L8 from 4, complete sequence
          Length = 169814

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    gccctattaaattgcgtaag 252
              ||||||||||||||||||||
Sbjct: 130488 gccctattaaattgcgtaag 130469
to top
>gb|AC011008.10| Homo sapiens chromosome 8, clone RP11-177H2, complete sequence
          Length = 162245

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 300    gaatcatattcagaagaaacctaa 323
              |||||| |||||||||||||||||
Sbjct: 103970 gaatcagattcagaagaaacctaa 103947
to top
>ref|NM_001021083.1| Schizosaccharomyces pombe 972h- 19S proteasome regulatory subunit
           (SPBC582.07c), partial mRNA
          Length = 1230

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 582 taataatcagctttgttttt 601
           ||||||||||||||||||||
Sbjct: 365 taataatcagctttgttttt 346
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     caaaggttgttagagataag 131
               ||||||||||||||||||||
Sbjct: 6704960 caaaggttgttagagataag 6704979
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 404      tttggatgaaggacatctga 423
                ||||||||||||||||||||
Sbjct: 14236589 tttggatgaaggacatctga 14236570
to top
>dbj|AP004151.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_E02
          Length = 125860

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   tttggatgaaggacatctga 423
             ||||||||||||||||||||
Sbjct: 41739 tttggatgaaggacatctga 41720
to top
>emb|AJ242744.1|KAE242744 Klebsiella aerogenes partial phnJ gene for C-P lyase subunit
          Length = 410

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 gattcgtcagtttttcaaac 176
           ||||||||||||||||||||
Sbjct: 27  gattcgtcagtttttcaaac 46
to top
>emb|AL954843.8| Zebrafish DNA sequence from clone DKEY-149K8 in linkage group 15,
              complete sequence
          Length = 204599

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    tttggatgaaggacatctga 423
              ||||||||||||||||||||
Sbjct: 155277 tttggatgaaggacatctga 155296
to top
>emb|AL845280.4| Mouse DNA sequence from clone RP23-265L1 on chromosome X, complete
             sequence
          Length = 142846

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 197   aaanaaaagaaatgaatggaaag 219
             ||| |||||||||||||||||||
Sbjct: 98167 aaataaaagaaatgaatggaaag 98189
to top
>gb|U22412.1|CFU22412 Canis familiaris beta-A3/A1 crystalline gene, partial cds
          Length = 734

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 544 tttacatttgcaagagttac 563
           ||||||||||||||||||||
Sbjct: 64  tttacatttgcaagagttac 45
to top
>dbj|D89258.1| Schizosaccharomyces pombe mRNA, partial cds, clone: SY 1700
          Length = 1175

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 582 taataatcagctttgttttt 601
           ||||||||||||||||||||
Sbjct: 304 taataatcagctttgttttt 285


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,478,464
Number of Sequences: 3902068
Number of extensions: 6478464
Number of successful extensions: 128563
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128233
Number of HSP's gapped (non-prelim): 317
length of query: 616
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 593
effective length of database: 17,143,297,704
effective search space: 10165975538472
effective search space used: 10165975538472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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