ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags22c21 |
|---|---|
| Clone Library Name | barley_pub |
>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21| Length = 348 Score = 35.0 bits (79), Expect = 0.11 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 4/106 (3%) Frame = -2 Query: 404 PSRHPEGPQPSRR*CRVNTATSTACPASECSSCTRSTGRQA----LAEWAMTRASKQAPP 237 PS P SR + ++A S++ AS S R+T A + + +R+ ++P Sbjct: 212 PSSPPRKRARSRSASQDSSARSSSSHASPRSPTPRTTSHVASYSSYSSRSRSRSRSRSPL 271 Query: 236 RHMRAGRSVMRSRHLSSSAEAKQQPEQGHSPT*PSQCPEQSTWPSQ 99 H R+ RS RSR S + ++ + HS + S+ P +S PS+ Sbjct: 272 SHSRSSRSRSRSR---SRSRSRSRSPLSHSRSSRSRSPSRSRSPSR 314
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 33.9 bits (76), Expect = 0.24 Identities = 32/100 (32%), Positives = 40/100 (40%) Frame = -2 Query: 413 MCPPSRHPEGPQPSRR*CRVNTATSTACPASECSSCTRSTGRQALAEWAMTRASKQAPPR 234 M PP RH P RR R S+A + SS + S R + +S R Sbjct: 330 MPPPPRHRRSRSPGRRRRR-----SSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTR 384 Query: 233 HMRAGRSVMRSRHLSSSAEAKQQPEQGHSPT*PSQCPEQS 114 + S R RH SS A P+ HSPT P+QS Sbjct: 385 RLSPSASPPRRRHRPSS-PATPPPKTRHSPT-----PQQS 418
>UNG_PRVKA (P52507) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 316 Score = 32.7 bits (73), Expect = 0.53 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 5/101 (4%) Frame = -2 Query: 389 EGPQPSRR*CRVNTATSTACPASECSSCTRSTGRQALAEWAMTRASKQAPPRHMRAGRSV 210 EGP PS+R C + PA+ +S + + A A A A P R A R Sbjct: 2 EGPPPSKRPCGLPPGVRLVVPAAAAASASNAATAAAAAAPAGAGAGASKPARPSAAARPA 61 Query: 209 MRSRHLSSS-----AEAKQQPEQGHSPT*PSQCPEQSTWPS 102 + S++ A+A P +PT + E PS Sbjct: 62 KGTPAASAATTATGADASAPPPDPGAPTWDAFAAEFDVAPS 102
>PI4K_DICDI (P54677) Phosphatidylinositol 4-kinase (EC 2.7.1.67) (PI4-kinase)| (PtdIns-4-kinase) (PI4K-alpha) Length = 1093 Score = 32.3 bits (72), Expect = 0.70 Identities = 19/61 (31%), Positives = 31/61 (50%) Frame = -2 Query: 476 SLPIIPSRTPTLLPLDLLFEAMCPPSRHPEGPQPSRR*CRVNTATSTACPASECSSCTRS 297 SLP+ P+++ L L A+ PPS+ + P PS NT T+T + ++ T + Sbjct: 725 SLPVTPTQSTVLNNLISTSTAISPPSQQQQLPSPS------NTTTTTTTTTTNTNNTTTT 778 Query: 296 T 294 T Sbjct: 779 T 779
>MATK_TRISM (Q8MCM3) Maturase K (Intron maturase)| Length = 509 Score = 31.2 bits (69), Expect = 1.6 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 10/90 (11%) Frame = +2 Query: 200 VISSLNDLLACDA-AVPASKPLSWPTPRELDDL---------YCVYMKSIPKQDKLSRLQ 349 +I SL C+ P SKP+ W + D + C Y K+ L R++ Sbjct: 370 IIRSLAKAKFCNVLGHPISKPV-WADSSDFDIIERFLRICSNLCHYYHGSSKKKSLYRIK 428 Query: 350 YLLDISAEKAEDLRDAATAGTLPQTAGQEE 439 Y+L +S K + +T QT+G EE Sbjct: 429 YILRLSCIKTLACKHKSTVRAFLQTSGSEE 458
>VGLG_BRSVW (O10687) Major surface glycoprotein G (Attachment glycoprotein G)| Length = 263 Score = 31.2 bits (69), Expect = 1.6 Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 7/89 (7%) Frame = -2 Query: 404 PSRHPEGPQPSRR*CRVNTATSTACPASECSSCTRSTGRQALAEWAMTRASKQAP----- 240 P +P G P + S P CS+C + +L + RAS +AP Sbjct: 146 PPINPSGSNPPEN--HQDHNNSQTLPHVPCSTCEGNPACSSLCQIGPERASSRAPTITLK 203 Query: 239 --PRHMRAGRSVMRSRHLSSSAEAKQQPE 159 P+ + + H +S EAK QP+ Sbjct: 204 KTPKPKTTKKPTKTTIHRKTSPEAKPQPK 232
>CIC_MOUSE (Q924A2) Protein capicua homolog| Length = 1606 Score = 30.8 bits (68), Expect = 2.0 Identities = 37/142 (26%), Positives = 52/142 (36%), Gaps = 23/142 (16%) Frame = -2 Query: 461 PSRTPTLLPLDLLFE---AMCPPSRH--PEGPQPSRR*CRVNTATSTACPASECSSCTRS 297 P P+ P L++ + PP+ P+GP S AT+T P S S T Sbjct: 1104 PLGPPSQAPPSLVYTVATSTTPPAATILPKGPPAS--------ATATPAPTSPFPSATAG 1155 Query: 296 TGRQALAEWAMTRASKQAPPRHMRA--------------GRSVMRSRHLSSSAEAKQ--- 168 + +L R S +AP + A GR R S S A++ Sbjct: 1156 SMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFESGTTGRPGSTPRQSSDSGVAREPAA 1215 Query: 167 -QPEQGHSPT*PSQCPEQSTWP 105 + E PT P+ P TWP Sbjct: 1216 PESELEGQPTPPAPPPPTETWP 1237
>GAG_SMRVH (P21411) Gag polyprotein [Contains: Core protein p19; Core protein| p16; Probable core protein p35; Probable core protein p10] Length = 739 Score = 30.8 bits (68), Expect = 2.0 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 8/73 (10%) Frame = -2 Query: 407 PPSRHPEGPQPSRR*CRVNTATSTACP--------ASECSSCTRSTGRQALAEWAMTRAS 252 PP++ P P + N +T CP ASEC S G+ + + + R Sbjct: 623 PPTQLPTQPNAPQASLIKNLGPTTKCPRCKKGFHWASECRSRLDINGQPIIKQGNLNRGQ 682 Query: 251 KQAPPRHMRAGRS 213 Q P M +G S Sbjct: 683 PQGPTTGMNSGAS 695
>NPHP4_MOUSE (P59240) Nephrocystin-4 (Nephroretinin)| Length = 1425 Score = 30.8 bits (68), Expect = 2.0 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +2 Query: 320 PKQDKLSRLQYLLDISAEKAEDLRDAATAGTLPQTAGQEEE 442 PK+ ++ + Q L D+ +E A L AG PQ AGQE + Sbjct: 868 PKRKRVVQAQRLADVDSELAAMLLTHTRAGQGPQAAGQEAD 908
>UNG_PRVIF (P52506) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 315 Score = 30.8 bits (68), Expect = 2.0 Identities = 26/94 (27%), Positives = 36/94 (38%) Frame = -2 Query: 389 EGPQPSRR*CRVNTATSTACPASECSSCTRSTGRQALAEWAMTRASKQAPPRHMRAGRSV 210 EGP PS+R C + PA+ S+ +T A A A A P R A R Sbjct: 2 EGPPPSKRPCGLPPGVRLVVPAAAASASNAATAAAAAAP-AGAGAGASKPARPPAAARPA 60 Query: 209 MRSRHLSSSAEAKQQPEQGHSPT*PSQCPEQSTW 108 + S++ A G + P+ P TW Sbjct: 61 KGTPAASAATTA-----TGADASAPAPDPGAPTW 89
>PMPI_CHLTR (O84882) Probable outer membrane protein pmpI precursor| (Polymorphic membrane protein I) Length = 878 Score = 30.8 bits (68), Expect = 2.0 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 6/96 (6%) Frame = -2 Query: 428 LLFEAMCPPSRHPEGPQPSRR*CRVNTAT-STACPASECSSCTRST--GRQALAEWAMTR 258 L F+ + S E P PS V + T +TA P +S RS + L+E T Sbjct: 350 LFFDPIVQESSSKESPLPSSLQASVTSPTPATASPLVIQTSANRSVIFSSERLSEEEKTP 409 Query: 257 ---ASKQAPPRHMRAGRSVMRSRHLSSSAEAKQQPE 159 S+ P +++GR V++ R + S+ Q P+ Sbjct: 410 DNLTSQLQQPIELKSGRLVLKDRAVLSAPSLSQDPQ 445
>M3K13_HUMAN (O43283) Mitogen-activated protein kinase kinase kinase 13 (EC| 2.7.11.25) (Mixed lineage kinase) (MLK) (Leucine zipper-bearing kinase) Length = 966 Score = 29.6 bits (65), Expect = 4.5 Identities = 22/88 (25%), Positives = 34/88 (38%) Frame = -2 Query: 359 RVNTATSTACPASECSSCTRSTGRQALAEWAMTRASKQAPPRHMRAGRSVMRSRHLSSSA 180 R + S P +E + + +++ ++ PRH R R H +A Sbjct: 548 RPDLLRSEGIPTTEVAPTASPLSGSPKMSTSSSKSRYRSKPRHRRGNS---RGSHSDFAA 604 Query: 179 EAKQQPEQGHSPT*PSQCPEQSTWPSQH 96 K QP Q +SP QS +PS H Sbjct: 605 ILKNQPAQENSPHPTYLHQAQSQYPSLH 632
>VGLG_BRSVR (P69350) Major surface glycoprotein G (Attachment glycoprotein G)| Length = 257 Score = 29.6 bits (65), Expect = 4.5 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 7/89 (7%) Frame = -2 Query: 404 PSRHPEGPQPSRR*CRVNTATSTACPASECSSCTRSTGRQALAEWAMTRASKQAP----- 240 P +P G P + S P CS+C + +L + + RA +AP Sbjct: 146 PPINPSGSNPPEN--HQDHNNSQTLPYVPCSTCEGNLACSSLCQIGLERAPSRAPTITLK 203 Query: 239 --PRHMRAGRSVMRSRHLSSSAEAKQQPE 159 P+ + + H +S EAK QP+ Sbjct: 204 KAPKPKTTKKPTKTTIHHRTSPEAKLQPK 232
>VGLG_BRSVL (O09495) Major surface glycoprotein G (Attachment glycoprotein G)| Length = 257 Score = 29.6 bits (65), Expect = 4.5 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 7/89 (7%) Frame = -2 Query: 404 PSRHPEGPQPSRR*CRVNTATSTACPASECSSCTRSTGRQALAEWAMTRASKQAP----- 240 P +P G P + S P CS+C + +L + + RA +AP Sbjct: 146 PPINPSGSNPPEN--HQDHNNSQTLPYVPCSTCEGNLACSSLCQIGLERAPSRAPTITLK 203 Query: 239 --PRHMRAGRSVMRSRHLSSSAEAKQQPE 159 P+ + + H +S EAK QP+ Sbjct: 204 KAPKPKTTKKPTKTTIHHRTSPEAKLQPK 232
>VGLG_BRSV9 (P69351) Major surface glycoprotein G (Attachment glycoprotein G)| Length = 257 Score = 29.6 bits (65), Expect = 4.5 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 7/89 (7%) Frame = -2 Query: 404 PSRHPEGPQPSRR*CRVNTATSTACPASECSSCTRSTGRQALAEWAMTRASKQAP----- 240 P +P G P + S P CS+C + +L + + RA +AP Sbjct: 146 PPINPSGSNPPEN--HQDHNNSQTLPYVPCSTCEGNLACSSLCQIGLERAPSRAPTITLK 203 Query: 239 --PRHMRAGRSVMRSRHLSSSAEAKQQPE 159 P+ + + H +S EAK QP+ Sbjct: 204 KAPKPKTTKKPTKTTIHHRTSPEAKLQPK 232
>CS016_HUMAN (Q8ND99) Protein C19orf16| Length = 567 Score = 29.6 bits (65), Expect = 4.5 Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 13/128 (10%) Frame = -2 Query: 473 LPIIPSRT----PTLLPLDLLFEAMCPPSRHPEGPQPSRR*CRVNTATSTACPA----SE 318 LP +P+ + P L P A PP + P P PS++ V A S PA S Sbjct: 75 LPAVPASSWKPPPGLAPPQKAPAASAPPRKAPAVPAPSQKAPAV-PAPSQKAPAIPAPSR 133 Query: 317 CSSCTRSTGRQALAEWAMTRASKQAPPRHMRAGRSVMRSRHLSSSAEAKQQ-----PEQG 153 +S ++ R+A A A + K PP + + +S +A K+ P Q Sbjct: 134 KASAASASPRKASAVPAPPQ--KTPPPSQKAPSVPTIPQKAVSPTAPKKKSLLLPAPSQK 191 Query: 152 HSPT*PSQ 129 PT P+Q Sbjct: 192 ALPTSPTQ 199
>MARK4_MOUSE (Q8CIP4) MAP/microtubule affinity-regulating kinase 4 (EC 2.7.11.1)| Length = 752 Score = 29.6 bits (65), Expect = 4.5 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -1 Query: 291 SSSSRGVGHDKGFEAGTAASHASRSFSDEITPS 193 +SSS+G H+KG A ++ H R SD PS Sbjct: 397 TSSSKGSSHNKGQRASSSTYHRQRRHSDFCGPS 429
>MARK4_HUMAN (Q96L34) MAP/microtubule affinity-regulating kinase 4 (EC 2.7.11.1)| (MAP/microtubule affinity-regulating kinase-like 1) Length = 752 Score = 29.6 bits (65), Expect = 4.5 Identities = 26/94 (27%), Positives = 35/94 (37%) Frame = -1 Query: 291 SSSSRGVGHDKGFEAGTAASHASRSFSDEITPSLFFCRSKATA*TRAFSNLTFAMS*TID 112 +SSS+G H KG + ++ H R SD PS K + + + Sbjct: 397 TSSSKGTSHSKGQRSSSSTYHRQRRHSDFCGPSPAPLHPKRSP----------TSTGEAE 446 Query: 111 LAFSALMMRSAGIFTYTSSSSNSPVPDENISSAH 10 L L R A T S S P +SSAH Sbjct: 447 LKEERLPGRKASCSTAGSGSRGLPPSSPMVSSAH 480
>M3K13_PONPY (Q5R8X7) Mitogen-activated protein kinase kinase kinase 13 (EC| 2.7.11.25) Length = 966 Score = 29.3 bits (64), Expect = 5.9 Identities = 22/88 (25%), Positives = 33/88 (37%) Frame = -2 Query: 359 RVNTATSTACPASECSSCTRSTGRQALAEWAMTRASKQAPPRHMRAGRSVMRSRHLSSSA 180 R + S P +E + + +++ ++ PRH R R H A Sbjct: 548 RPDLLRSEGIPTTEVAPTASPLSGSPKMSTSSSKSRYRSKPRHRRGNS---RGSHSDFVA 604 Query: 179 EAKQQPEQGHSPT*PSQCPEQSTWPSQH 96 K QP Q +SP QS +PS H Sbjct: 605 ILKNQPAQENSPNPTYLHQAQSQYPSLH 632
>HTPG_XANC5 (Q3BS21) Chaperone protein htpG (Heat shock protein htpG) (High| temperature protein G) Length = 634 Score = 29.3 bits (64), Expect = 5.9 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 5/79 (6%) Frame = +2 Query: 41 GEFDEEEVYVKMPADLIISAEKARSIVQ-----DIAKVRLENALVQAVALLRQKKRDGVI 205 G+ D EE K DL S E S ++ D+A+VR+ + L + A+L + D + Sbjct: 497 GKLDSEEDK-KAQEDLAKSKEGLASRIKAALGDDVAEVRVSHRLTDSPAILAIGQGDLGL 555 Query: 206 SSLNDLLACDAAVPASKPL 262 L A AVP SKP+ Sbjct: 556 QMRQLLEASGQAVPESKPV 574
>VGLG_BRSV7 (Q65706) Major surface glycoprotein G (Attachment glycoprotein G)| Length = 257 Score = 29.3 bits (64), Expect = 5.9 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 7/90 (7%) Frame = -2 Query: 407 PPSRHPEGPQPSRR*CRVNTATSTACPASECSSCTRSTGRQALAEWAMTRASKQAP---- 240 PP E P N+ T P CS+C + +L + RA +AP Sbjct: 146 PPINPSESNPPENHQDHNNSQT---LPYEPCSTCEGNLACLSLCQVGPGRAPSRAPTITL 202 Query: 239 ---PRHMRAGRSVMRSRHLSSSAEAKQQPE 159 P+ R + + H +S EAK QP+ Sbjct: 203 KKTPKPKTTKRPIKTTIHHRTSPEAKLQPK 232
>OP2_MAIZE (P12959) Regulatory protein opaque-2| Length = 453 Score = 29.3 bits (64), Expect = 5.9 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 21/81 (25%) Frame = +2 Query: 98 AEKARSIVQDIAKVRLENA-LVQAVALLRQKKRDGVIS--------------------SL 214 A + + +A+++ EN+ L++ +A L QK D + SL Sbjct: 247 AAHLKELEDQVAQLKAENSCLLRRIAALNQKYNDANVDNRVLRADMETLRAKVKMGEDSL 306 Query: 215 NDLLACDAAVPASKPLSWPTP 277 ++ ++VP+S P+S PTP Sbjct: 307 KRVIEMSSSVPSSMPISAPTP 327
>TEP1_HUMAN (Q99973) Telomerase protein component 1 (Telomerase-associated| protein 1) (Telomerase protein 1) (p240) (p80 telomerase homolog) Length = 2627 Score = 29.3 bits (64), Expect = 5.9 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -2 Query: 482 KCSLPIIPSRTPTLLPLDLLFEAMCPPSRHPEGP 381 K SLP++P RT + D + +CP S +P+GP Sbjct: 668 KHSLPLLPGRTVLVYLTDANADRLCPKS-NPQGP 700
>KCNH2_RABIT (Q8WNY2) Potassium voltage-gated channel subfamily H member 2| (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go-related gene potassium channel 1) (ERG1) (RERG) (ra-erg) (Ether-a-go-go-related protein 1) (Eag-related protein 1) Length = 1161 Score = 28.9 bits (63), Expect = 7.7 Identities = 24/76 (31%), Positives = 32/76 (42%) Frame = -2 Query: 407 PPSRHPEGPQPSRR*CRVNTATSTACPASECSSCTRSTGRQALAEWAMTRASKQAPPRHM 228 PP GP PS R +N P + SSC+ + R + ++ RAS M Sbjct: 241 PPPVSAPGPHPSLRAHSLN-------PDASGSSCSLARTRSRESCASVRRASSADDIEAM 293 Query: 227 RAGRSVMRSRHLSSSA 180 RAG RH S+ A Sbjct: 294 RAGALPPPPRHASTGA 309
>VNUC_EBOG4 (Q9QCE9) Nucleoprotein (Nucleocapsid protein)| Length = 739 Score = 28.9 bits (63), Expect = 7.7 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 9/80 (11%) Frame = +2 Query: 233 DAAVPASKPLS-WPTPRELDDLYC------VYMKSIPKQDKLSRLQY--LLDISAEKAED 385 +AA A K L + RELD L + M K++++S Q ++ + E+ Sbjct: 345 EAATEAEKQLQQYAESRELDHLGLDDQEKKILMNFHQKKNEISFQQTNAMVTLKKERLAK 404 Query: 386 LRDAATAGTLPQTAGQEEEE 445 L +A TA +LP+T+G +++ Sbjct: 405 LTEAITAASLPKTSGHYDDD 424
>C43BP_MOUSE (Q9EQG9) Goodpasture antigen-binding protein (EC 2.7.11.9) (GPBP)| (Collagen type IV alpha-3-binding protein) (StAR-related lipid transfer protein 11) (StARD11) (START domain-containing protein 11) Length = 624 Score = 28.9 bits (63), Expect = 7.7 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +3 Query: 384 TFGMPRRRAHCLKQQVKRKKSWRSRGD 464 T G+ +HC++ VKR++SW+ R D Sbjct: 252 TAGILATLSHCIELMVKREESWQKRHD 278
>YHOH_SCHPO (O94364) Serine-rich protein C428.17c in chromosome II| Length = 602 Score = 28.9 bits (63), Expect = 7.7 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 9/61 (14%) Frame = -1 Query: 159 TRAFSNLTFAMS*TIDLAFSALMMRSAGIFTYTS---------SSSNSPVPDENISSAHF 7 T +FSN + A S +I LA ALM S+G+F + + P+ EN S +F Sbjct: 309 TFSFSNESLASSDSISLAAIALMKTSSGVFAESELFTELINLLIEKSYPILKENDGSNNF 368 Query: 6 L 4 L Sbjct: 369 L 369
>INSI1_RAT (Q08755) Insulin-induced gene 1 protein (INSIG-1) (Insulin-induced| growth response protein CL-6) (Immediate-early protein CL-6) Length = 259 Score = 28.9 bits (63), Expect = 7.7 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = -2 Query: 476 SLPIIPSRTPTLLPLDLLFEAMCPPSRHPEGPQPSRR*CRVNTATSTACPAS 321 S P + P LP ++ A+CP P+P+ R R TA +A P S Sbjct: 10 SYPSAGAARPYSLPRGMIAAALCPQGPGAPEPEPAPRGQREGTAGFSARPGS 61
>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) (Proline-rich inositol polyphosphate 5-phosphatase) Length = 1001 Score = 28.9 bits (63), Expect = 7.7 Identities = 36/140 (25%), Positives = 54/140 (38%), Gaps = 18/140 (12%) Frame = -2 Query: 464 IPSRTPTLLPLDLLFEAMCPPSRHPEGPQPSRR*CRVNTATSTACP---ASECSSCTRST 294 + S P L PL E PP P P+ V +A + P AS +S Sbjct: 79 LSSPRPILAPLSTAGEQKRPPPHRSSKPAPTSVGQLVVSAAAGPKPPPVASVSILAPKSL 138 Query: 293 GRQALAEWAM---------------TRASKQAPPRHMRAGRSVMRSRHLSSSAEAKQQPE 159 G+ ++ AM +R KQ P + + + + LS + +++QP Sbjct: 139 GQLVISASAMPRPTPAPLGPILSPTSRDQKQLSPTSV-GPKPALATSGLSLALASQEQPP 197 Query: 158 QGHSPT*PSQCPEQSTWPSQ 99 Q SP+ PS P PSQ Sbjct: 198 Q--SPSSPSPVPSPVLSPSQ 215 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,513,642 Number of Sequences: 219361 Number of extensions: 1321429 Number of successful extensions: 5495 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 5262 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5490 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
