>SAHH_METKA (P58855) Adenosylhomocysteinase (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
          Length = 424

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 216 DTNLRYYTNADAILRHYTDAILWHYTDAILRHYTEHP 326
           +T   YY N D +L H  D I+    D I R +TE P
Sbjct: 107 ETEEEYYQNIDRVLSHEPDIIVDDGADCIARVHTEFP 143

>PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa) (P145)
          Length = 1199

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 136 SSAHATLPGSCRSSVKQAPPRQHSSEEPCHPSCS 35
           +S+  + P S RS   + P ++   EEPCH S S
Sbjct: 407 TSSPFSSPASSRSQTPERPAKKTREEEPCHQSSS 440

>GLND_AZOVI (P36223) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 899

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +3

Query: 189 VRRRLQPDTDTNLRYYTNADAILRHYTDAILWHYTDAILRH 311
           VR    PD   +L      D  LRH +  I WH T+AIL+H
Sbjct: 644 VRSGTDPDDAEHLWTQLGDDYFLRHTSSDIAWH-TEAILQH 683

>SPRR1_PIG (P35323) Cornifin (Small proline-rich protein I) (SPR-I) (Small|
           proline-rich squamous cell marker) (SPRP)
          Length = 97

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -2

Query: 145 KSRSSAHATLPGSCRSSVKQAPPRQHSSEEPCHPSCSQYVQSRQP 11
           K++   H  +P  C+  V +  P Q    EPCHP   +  Q + P
Sbjct: 36  KTKEPCHPKVPEPCQPKVPE--PCQPKVPEPCHPKVPEPCQPKVP 78

>MMTA2_RAT (Q5M9I6) Multiple myeloma tumor-associated protein 2 homolog|
          Length = 260

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = -2

Query: 148 KKSRSSAHATLPGSCRSSVKQAPPR--QHSSEEPCHPSCSQYVQ--SRQPSCR 2
           KK +   H     SC SS   A PR  +HS   PC+    ++ Q   R PS R
Sbjct: 200 KKKKDKEHKREADSCSSSPSPARPRRQRHSDFSPCYKRKREHSQDSGRNPSHR 252

>ATS20_HUMAN (P59510) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 20) (ADAM-TS
            20) (ADAM-TS20)
          Length = 1911

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 94   VKQAPPRQHSSEEPCHPSCSQYVQSRQPSCR 2
            +K+    +H S  PC  SC +  Q+R  SCR
Sbjct: 1151 IKKMAQWRHGSWTPCSVSCGRGTQARYVSCR 1181

>MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog)|
            (SMART/HDAC1-associated repressor protein)
          Length = 3664

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 166  PHSGA*KKSRSSAHATLPGSCRSSVKQAPPRQHSSEE 56
            P +   +K     H+T P SC S + + P  ++SS+E
Sbjct: 2378 PEAPQEEKQSEKPHSTPPQSCTSDLSKIPSTENSSQE 2414

>FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor|
          Length = 4010

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -2

Query: 133 SAHATLPGSCRSSVKQAPPRQHSSEEPCHPSCSQ 32
           S HA L G C S   +       +   CHPSC Q
Sbjct: 733 STHALLAGCCVSQCPETHFNLEGTCTECHPSCRQ 766

>PFTA_RAT (Q04631) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransfer
          Length = 377

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 18/77 (23%), Positives = 34/77 (44%)
 Frame = +3

Query: 186 WVRRRLQPDTDTNLRYYTNADAILRHYTDAILWHYTDAILRHYTEHPKYTFP*SPCKSKE 365
           + R  LQ D  +   +    DAI  +  +  +WH+   +LR            S  K  +
Sbjct: 102 YFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLR------------SLQKDLQ 149

Query: 366 AWIHWILRLLEESPRRY 416
             +++I+ ++EE P+ Y
Sbjct: 150 EEMNYIIAIIEEQPKNY 166


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.129    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,483,239
Number of Sequences: 219361
Number of extensions: 863408
Number of successful extensions: 1922
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1917
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)