ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags22c20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009377.1| Triticum aestivum clone wlm96.pk030.m18:fis, full... 248 4e-63
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 168 3e-39
3dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic D... 168 3e-39
4ref|XM_466313.1| Oryza sativa (japonica cultivar-group), mRNA 127 9e-27
5dbj|AK060161.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 9e-27
6gb|AY109533.1| Zea mays CL775_1 mRNA sequence 94 1e-16
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 90 2e-15
8dbj|AK069926.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 2e-15
9emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 90 2e-15
10gb|BT018995.1| Zea mays clone Contig483.F mRNA sequence 82 5e-13
11gb|AY104980.1| Zea mays PCO111857 mRNA sequence 82 5e-13
12dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.007
13dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.007
14dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.007
15dbj|AK067260.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.007
16dbj|AK060597.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.007
17emb|AL844850.9| Mouse DNA sequence from clone RP23-255B16 on chr... 42 0.42
18gb|AC110374.3| Mus musculus BAC clone RP23-293P18 from 15, compl... 40 1.7
19emb|BX914198.13| Zebrafish DNA sequence from clone DKEY-7I21 in ... 40 1.7
20emb|BX511260.11| Zebrafish DNA sequence from clone CH211-121A2, ... 40 1.7
21emb|BX088601.12| Zebrafish DNA sequence from clone DKEY-221L8, c... 40 1.7
22emb|AL929171.9| Zebrafish DNA sequence from clone CH211-132P20 i... 40 1.7
23emb|CR376852.17| Zebrafish DNA sequence from clone CH211-181B18 ... 40 1.7
24ref|XM_430005.1| PREDICTED: Gallus gallus LOC422928 (LOC422928),... 38 6.6
25gb|AC138682.14| Mus musculus chromosome 5, clone RP23-34L23, com... 38 6.6
26gb|AC116568.5| Mus musculus BAC clone RP23-34C4 from chromosome ... 38 6.6
27gb|AC110540.7| Mus musculus chromosome 3, clone RP23-105B8, comp... 38 6.6
28emb|AL928580.4| Human DNA sequence from clone RP11-199F9 on chro... 38 6.6
29emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 38 6.6
30emb|BX005227.12| Zebrafish DNA sequence from clone CH211-286C23 ... 38 6.6
31emb|AL645584.27| Mouse DNA sequence from clone RP23-280M7 on chr... 38 6.6
32gb|AC126917.1| Homo sapiens chromosome 5 clone RP11-467F22, comp... 38 6.6
33gb|AC069023.5| Homo sapiens chromosome 10 clone RP11-457D2, comp... 38 6.6
34gb|AC010052.7| Drosophila melanogaster 3L BAC RP98-5G1 (Roswell ... 38 6.6
35emb|CR623860.1| full-length cDNA clone CS0DF004YE04 of Fetal bra... 38 6.6
36dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 38 6.6
37gb|AC034154.6| Homo sapiens BAC clone RP11-242D9 from 4, complet... 38 6.6
38gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswel... 38 6.6
39gb|AC087219.1|AC087219 Homo sapiens chromosome 5 clone RP11-323C... 38 6.6
40dbj|AB154532.1| Cucumis melo 7G07 mRNA for hypothetical protein,... 38 6.6
41gb|AC084423.1|AC084423 Caenorhabditis briggsae cosmid CB020D11, ... 38 6.6
42gb|AC079465.5| Homo sapiens chromosome 5 clone CTD-2124P24, comp... 38 6.6
43gb|AC149602.1| Mus musculus BAC clone RP24-116G21 from chromosom... 38 6.6
44gb|AC091312.8| Mus musculus chromosome 3, clone RP23-333N1, comp... 38 6.6
45gb|AC008806.4|AC008806 Homo sapiens chromosome 19 clone CTD-2086... 38 6.6
46gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37... 38 6.6
47dbj|AP007293.1| Lotus japonicus genomic DNA, chromosome 1, clone... 38 6.6
48gb|AC121834.4| Mus musculus BAC clone RP24-72F20 from chromosome... 38 6.6 
>gb|BT009377.1| Triticum aestivum clone wlm96.pk030.m18:fis, full insert mRNA
           sequence
          Length = 643

 Score =  248 bits (125), Expect = 4e-63
 Identities = 135/139 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   catgcatnagcagagaaagcacttcagaatttcgctggncatgtaatgcctaatactgac 60
           ||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 564 catgcatcagcagagaaagcacttcagaattttgctggtcatgtaatgcctaatactgac 505

                                                                       
Query: 61  cgagcttttaagttaaattgggcatcatatagtgttggagaaaaacgctctgaacttgct 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 504 cgagcttttaagttaaattgggcatcgtatagtgttggagaaaaacgctctgaacttgct 445

                              
Query: 121 tctgatcactcaatttttg 139
           |||||||||||||||||||
Sbjct: 444 tctgatcactcaatttttg 426
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  168 bits (85), Expect = 3e-39
 Identities = 125/139 (89%)
 Strand = Plus / Plus

                                                                            
Query: 1        catgcatnagcagagaaagcacttcagaatttcgctggncatgtaatgcctaatactgac 60
                ||||||| ||||||||||||||| ||||||||  |||| ||||||||||||||||| |||
Sbjct: 21617492 catgcatcagcagagaaagcactccagaatttttctggtcatgtaatgcctaataccgac 21617551

                                                                            
Query: 61       cgagcttttaagttaaattgggcatcatatagtgttggagaaaaacgctctgaacttgct 120
                ||||||||||||||||| ||||||||||||||  | |||||||| ||| | |||||||||
Sbjct: 21617552 cgagcttttaagttaaactgggcatcatatagcatgggagaaaagcgcgccgaacttgct 21617611

                                   
Query: 121      tctgatcactcaatttttg 139
                |||||||||||||| ||||
Sbjct: 21617612 tctgatcactcaatatttg 21617630
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>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0020D05
          Length = 158760

 Score =  168 bits (85), Expect = 3e-39
 Identities = 125/139 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      catgcatnagcagagaaagcacttcagaatttcgctggncatgtaatgcctaatactgac 60
              ||||||| ||||||||||||||| ||||||||  |||| ||||||||||||||||| |||
Sbjct: 106442 catgcatcagcagagaaagcactccagaatttttctggtcatgtaatgcctaataccgac 106501

                                                                          
Query: 61     cgagcttttaagttaaattgggcatcatatagtgttggagaaaaacgctctgaacttgct 120
              ||||||||||||||||| ||||||||||||||  | |||||||| ||| | |||||||||
Sbjct: 106502 cgagcttttaagttaaactgggcatcatatagcatgggagaaaagcgcgccgaacttgct 106561

                                 
Query: 121    tctgatcactcaatttttg 139
              |||||||||||||| ||||
Sbjct: 106562 tctgatcactcaatatttg 106580
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>ref|XM_466313.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1191

 Score =  127 bits (64), Expect = 9e-27
 Identities = 91/100 (91%)
 Strand = Plus / Plus

                                                                       
Query: 40  catgtaatgcctaatactgaccgagcttttaagttaaattgggcatcatatagtgttgga 99
           ||||||||||||||||| |||||||||||||||||||| ||||||||||||||  | |||
Sbjct: 412 catgtaatgcctaataccgaccgagcttttaagttaaactgggcatcatatagcatggga 471

                                                   
Query: 100 gaaaaacgctctgaacttgcttctgatcactcaatttttg 139
           ||||| ||| | ||||||||||||||||||||||| ||||
Sbjct: 472 gaaaagcgcgccgaacttgcttctgatcactcaatatttg 511
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>dbj|AK060161.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H10, full
           insert sequence
          Length = 1037

 Score =  127 bits (64), Expect = 9e-27
 Identities = 91/100 (91%)
 Strand = Plus / Plus

                                                                       
Query: 40  catgtaatgcctaatactgaccgagcttttaagttaaattgggcatcatatagtgttgga 99
           ||||||||||||||||| |||||||||||||||||||| ||||||||||||||  | |||
Sbjct: 1   catgtaatgcctaataccgaccgagcttttaagttaaactgggcatcatatagcatggga 60

                                                   
Query: 100 gaaaaacgctctgaacttgcttctgatcactcaatttttg 139
           ||||| ||| | ||||||||||||||||||||||| ||||
Sbjct: 61  gaaaagcgcgccgaacttgcttctgatcactcaatatttg 100
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>gb|AY109533.1| Zea mays CL775_1 mRNA sequence
          Length = 1689

 Score = 93.7 bits (47), Expect = 1e-16
 Identities = 74/85 (87%)
 Strand = Plus / Plus

                                                                       
Query: 9   agcagagaaagcacttcagaatttcgctggncatgtaatgcctaatactgaccgagcttt 68
           ||||||||| ||||| |||||     |||| || |||||||||||||||||||| |||||
Sbjct: 565 agcagagaaggcactgcagaannnnnctggtcacgtaatgcctaatactgaccgggcttt 624

                                    
Query: 69  taagttaaattgggcatcatatagt 93
           ||||||||| |||||||||||||||
Sbjct: 625 taagttaaactgggcatcatatagt 649
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 107/128 (83%)
 Strand = Plus / Plus

                                                                            
Query: 10       gcagagaaagcacttcagaatttcgctggncatgtaatgcctaatactgaccgagctttt 69
                |||||||| || |||||||||||  |||| ||||| |||||||| ||||| ||| |||| 
Sbjct: 22390612 gcagagaaggctcttcagaattttactggtcatgtgatgcctaacactgatcgacctttc 22390671

                                                                            
Query: 70       aagttaaattgggcatcatatagtgttggagaaaaacgctctgaacttgcttctgatcac 129
                |||||||| ||||| ||||||||  | || ||||| || |||||| ||||||||||  ||
Sbjct: 22390672 aagttaaactgggcttcatatagcatgggtgaaaagcgatctgaagttgcttctgactac 22390731

                        
Query: 130      tcaatttt 137
                ||||||||
Sbjct: 22390732 tcaatttt 22390739
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>dbj|AK069926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036B01, full
           insert sequence
          Length = 1632

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 107/128 (83%)
 Strand = Plus / Plus

                                                                       
Query: 10  gcagagaaagcacttcagaatttcgctggncatgtaatgcctaatactgaccgagctttt 69
           |||||||| || |||||||||||  |||| ||||| |||||||| ||||| ||| |||| 
Sbjct: 549 gcagagaaggctcttcagaattttactggtcatgtgatgcctaacactgatcgacctttc 608

                                                                       
Query: 70  aagttaaattgggcatcatatagtgttggagaaaaacgctctgaacttgcttctgatcac 129
           |||||||| ||||| ||||||||  | || ||||| || |||||| ||||||||||  ||
Sbjct: 609 aagttaaactgggcttcatatagcatgggtgaaaagcgatctgaagttgcttctgactac 668

                   
Query: 130 tcaatttt 137
           ||||||||
Sbjct: 669 tcaatttt 676
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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
              complete sequence
          Length = 147214

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 107/128 (83%)
 Strand = Plus / Plus

                                                                          
Query: 10     gcagagaaagcacttcagaatttcgctggncatgtaatgcctaatactgaccgagctttt 69
              |||||||| || |||||||||||  |||| ||||| |||||||| ||||| ||| |||| 
Sbjct: 141518 gcagagaaggctcttcagaattttactggtcatgtgatgcctaacactgatcgacctttc 141577

                                                                          
Query: 70     aagttaaattgggcatcatatagtgttggagaaaaacgctctgaacttgcttctgatcac 129
              |||||||| ||||| ||||||||  | || ||||| || |||||| ||||||||||  ||
Sbjct: 141578 aagttaaactgggcttcatatagcatgggtgaaaagcgatctgaagttgcttctgactac 141637

                      
Query: 130    tcaatttt 137
              ||||||||
Sbjct: 141638 tcaatttt 141645
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>gb|BT018995.1| Zea mays clone Contig483.F mRNA sequence
          Length = 1456

 Score = 81.8 bits (41), Expect = 5e-13
 Identities = 108/131 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   catgcatnagcagagaaagcacttcagaatttcgctggncatgtaatgcctaatactgac 60
           ||||||| |||||||||||| |||||||||||  |||| ||||| ||||| || ||||||
Sbjct: 310 catgcatcagcagagaaagctcttcagaattttactggtcatgtgatgccaaacactgac 369

                                                                       
Query: 61  cgagcttttaagttaaattgggcatcatatagtgttggagaaaaacgctctgaacttgct 120
           ||  | ||||| || || |||||||| |||||  | || ||||| || |||||| | |||
Sbjct: 370 cggccatttaaattgaactgggcatcgtatagcatgggtgaaaagcgatctgaagtggct 429

                      
Query: 121 tctgatcactc 131
           |||||||||||
Sbjct: 430 tctgatcactc 440
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>gb|AY104980.1| Zea mays PCO111857 mRNA sequence
          Length = 1651

 Score = 81.8 bits (41), Expect = 5e-13
 Identities = 108/131 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   catgcatnagcagagaaagcacttcagaatttcgctggncatgtaatgcctaatactgac 60
           ||||||| |||||||||||| |||||||||||  |||| ||||| ||||| || ||||||
Sbjct: 519 catgcatcagcagagaaagctcttcagaattttactggtcatgtgatgccaaacactgac 578

                                                                       
Query: 61  cgagcttttaagttaaattgggcatcatatagtgttggagaaaaacgctctgaacttgct 120
           ||  | ||||| || || |||||||| |||||  | || ||||| || |||||| | |||
Sbjct: 579 cggccatttaaattgaactgggcatcgtatagcatgggtgaaaagcgatctgaagtggct 638

                      
Query: 121 tctgatcactc 131
           |||||||||||
Sbjct: 639 tctgatcactc 649
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                       
Query: 34       gctggncatgtaatgcctaatactgaccgagcttttaagttaaattgggcatcat 88
                ||||| ||| ||||||| || ||||||| | |||||| | |||||||||||||||
Sbjct: 17446082 gctggtcatataatgccaaacactgaccaaccttttaggataaattgggcatcat 17446136
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>dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0019B14
          Length = 127570

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                    
Query: 34    gctggncatgtaatgcctaatactgaccgagcttttaagttaaattgggcatcat 88
             ||||| ||| ||||||| || ||||||| | |||||| | |||||||||||||||
Sbjct: 10260 gctggtcatataatgccaaacactgaccaaccttttaggataaattgggcatcat 10314
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>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0054F02
          Length = 180651

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                     
Query: 34     gctggncatgtaatgcctaatactgaccgagcttttaagttaaattgggcatcat 88
              ||||| ||| ||||||| || ||||||| | |||||| | |||||||||||||||
Sbjct: 169995 gctggtcatataatgccaaacactgaccaaccttttaggataaattgggcatcat 170049
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>dbj|AK067260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096N13, full
           insert sequence
          Length = 1615

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 34  gctggncatgtaatgcctaatactgaccgagcttttaagttaaattgggcatcat 88
           ||||| ||| ||||||| || ||||||| | |||||| | |||||||||||||||
Sbjct: 531 gctggtcatataatgccaaacactgaccaaccttttaggataaattgggcatcat 585
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>dbj|AK060597.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G08, full
           insert sequence
          Length = 1356

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 34  gctggncatgtaatgcctaatactgaccgagcttttaagttaaattgggcatcat 88
           ||||| ||| ||||||| || ||||||| | |||||| | |||||||||||||||
Sbjct: 275 gctggtcatataatgccaaacactgaccaaccttttaggataaattgggcatcat 329
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>emb|AL844850.9| Mouse DNA sequence from clone RP23-255B16 on chromosome 2, complete
             sequence
          Length = 179361

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 70    aagttaaattgggcatcatatagtg 94
             |||||||||||||||||| ||||||
Sbjct: 74338 aagttaaattgggcatcaaatagtg 74314
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>gb|AC110374.3| Mus musculus BAC clone RP23-293P18 from 15, complete sequence
          Length = 199869

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     atatagtgttggagaaaaac 106
              ||||||||||||||||||||
Sbjct: 125444 atatagtgttggagaaaaac 125425
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>emb|BX914198.13| Zebrafish DNA sequence from clone DKEY-7I21 in linkage group 3,
             complete sequence
          Length = 119178

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    gcacttcagaatttcgctgg 38
             ||||||||||||||||||||
Sbjct: 88139 gcacttcagaatttcgctgg 88158
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>emb|BX511260.11| Zebrafish DNA sequence from clone CH211-121A2, complete sequence
          Length = 190733

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    gcacttcagaatttcgctgg 38
             ||||||||||||||||||||
Sbjct: 14745 gcacttcagaatttcgctgg 14764
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>emb|BX088601.12| Zebrafish DNA sequence from clone DKEY-221L8, complete sequence
          Length = 33467

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    gcacttcagaatttcgctgg 38
             ||||||||||||||||||||
Sbjct: 17100 gcacttcagaatttcgctgg 17081
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>emb|AL929171.9| Zebrafish DNA sequence from clone CH211-132P20 in linkage group 4,
              complete sequence
          Length = 176577

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     gcacttcagaatttcgctgg 38
              ||||||||||||||||||||
Sbjct: 118278 gcacttcagaatttcgctgg 118259
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>emb|CR376852.17| Zebrafish DNA sequence from clone CH211-181B18 in linkage group 21,
             complete sequence
          Length = 157717

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    gcacttcagaatttcgctgg 38
             ||||||||||||||||||||
Sbjct: 16429 gcacttcagaatttcgctgg 16448
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>ref|XM_430005.1| PREDICTED: Gallus gallus LOC422928 (LOC422928), mRNA
          Length = 1455

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 9   agcagagaaagcacttcag 27
           |||||||||||||||||||
Sbjct: 464 agcagagaaagcacttcag 482
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>gb|AC138682.14| Mus musculus chromosome 5, clone RP23-34L23, complete sequence
          Length = 241585

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 9      agcagagaaagcacttcag 27
              |||||||||||||||||||
Sbjct: 220568 agcagagaaagcacttcag 220586
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>gb|AC116568.5| Mus musculus BAC clone RP23-34C4 from chromosome 8, complete sequence
          Length = 218715

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 70    aagttaaattgggcatcat 88
             |||||||||||||||||||
Sbjct: 52330 aagttaaattgggcatcat 52348
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>gb|AC110540.7| Mus musculus chromosome 3, clone RP23-105B8, complete sequence
          Length = 232416

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     tgtaatgcctaatactgac 60
              |||||||||||||||||||
Sbjct: 156654 tgtaatgcctaatactgac 156636
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>emb|AL928580.4| Human DNA sequence from clone RP11-199F9 on chromosome 10 Contains part
             of the gene for a novel protein similar to mannose
             receptor C type 1 (MRC1), complete sequence
          Length = 63525

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 103   aaacgctctgaacttgctt 121
             |||||||||||||||||||
Sbjct: 28382 aaacgctctgaacttgctt 28364
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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 73      ttaaattgggcatcatata 91
               |||||||||||||||||||
Sbjct: 2125020 ttaaattgggcatcatata 2125002
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>emb|BX005227.12| Zebrafish DNA sequence from clone CH211-286C23 in linkage group 21,
            complete sequence
          Length = 187709

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 121  tctgatcactcaatttttg 139
            |||||||||||||||||||
Sbjct: 7012 tctgatcactcaatttttg 7030
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>emb|AL645584.27| Mouse DNA sequence from clone RP23-280M7 on chromosome 1 Contains a
             novel gene and two CpG islands, complete sequence
          Length = 171382

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 109   tctgaacttgcttctgatc 127
             |||||||||||||||||||
Sbjct: 47623 tctgaacttgcttctgatc 47641
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>gb|AC126917.1| Homo sapiens chromosome 5 clone RP11-467F22, complete sequence
          Length = 206737

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 70     aagttaaattgggcatcat 88
              |||||||||||||||||||
Sbjct: 116161 aagttaaattgggcatcat 116143
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>gb|AC069023.5| Homo sapiens chromosome 10 clone RP11-457D2, complete sequence
          Length = 131345

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 103   aaacgctctgaacttgctt 121
             |||||||||||||||||||
Sbjct: 97883 aaacgctctgaacttgctt 97901
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>gb|AC010052.7| Drosophila melanogaster 3L BAC RP98-5G1 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 164941

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 91     agtgttggagaaaaacgct 109
              |||||||||||||||||||
Sbjct: 144696 agtgttggagaaaaacgct 144678
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>emb|CR623860.1| full-length cDNA clone CS0DF004YE04 of Fetal brain of Homo sapiens
           (human)
          Length = 1569

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 71  agttaaattgggcatcatatagt 93
           ||||||| |||||||||||||||
Sbjct: 363 agttaaaatgggcatcatatagt 341
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>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038
          Length = 1725576

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 103    aaacgctctgaacttgcttctga 125
              ||||||||| |||||||||||||
Sbjct: 177068 aaacgctctaaacttgcttctga 177046
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>gb|AC034154.6| Homo sapiens BAC clone RP11-242D9 from 4, complete sequence
          Length = 210563

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 73    ttaaattgggcatcatatagtgttgga 99
             ||||| ||||||| |||||||||||||
Sbjct: 12598 ttaaaatgggcatgatatagtgttgga 12624
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>gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 170356

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 91    agtgttggagaaaaacgct 109
             |||||||||||||||||||
Sbjct: 70396 agtgttggagaaaaacgct 70378
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>gb|AC087219.1|AC087219 Homo sapiens chromosome 5 clone RP11-323C17 Sp6 end, complete sequence
          Length = 61977

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 73    ttaaattgggcatcatatagtgt 95
             |||||||||| ||||||||||||
Sbjct: 37860 ttaaattgggaatcatatagtgt 37882
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>dbj|AB154532.1| Cucumis melo 7G07 mRNA for hypothetical protein, partial cds
          Length = 685

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 9   agcagagaaagcacttcag 27
           |||||||||||||||||||
Sbjct: 215 agcagagaaagcacttcag 197
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>gb|AC084423.1|AC084423 Caenorhabditis briggsae cosmid CB020D11, complete sequence
          Length = 85565

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 120   ttctgatcactcaattttt 138
             |||||||||||||||||||
Sbjct: 78078 ttctgatcactcaattttt 78096
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>gb|AC079465.5| Homo sapiens chromosome 5 clone CTD-2124P24, complete sequence
          Length = 184585

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 70     aagttaaattgggcatcat 88
              |||||||||||||||||||
Sbjct: 153358 aagttaaattgggcatcat 153376
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>gb|AC149602.1| Mus musculus BAC clone RP24-116G21 from chromosome 8, complete sequence
          Length = 158424

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 70     aagttaaattgggcatcat 88
              |||||||||||||||||||
Sbjct: 115880 aagttaaattgggcatcat 115898
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>gb|AC091312.8| Mus musculus chromosome 3, clone RP23-333N1, complete sequence
          Length = 199026

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 42     tgtaatgcctaatactgac 60
              |||||||||||||||||||
Sbjct: 169226 tgtaatgcctaatactgac 169244
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>gb|AC008806.4|AC008806 Homo sapiens chromosome 19 clone CTD-2086O20, complete sequence
          Length = 135173

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 71    agttaaattgggcatcatatagt 93
             ||||||| |||||||||||||||
Sbjct: 87950 agttaaaatgggcatcatatagt 87928
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>gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37 of 83 of the complete
             sequence
          Length = 244140

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 91    agtgttggagaaaaacgct 109
             |||||||||||||||||||
Sbjct: 81681 agtgttggagaaaaacgct 81663
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>dbj|AP007293.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34C12, TM0361,
             complete sequence
          Length = 108947

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 10    gcagagaaagcacttcagaattt 32
             |||||||||||||||||| ||||
Sbjct: 48174 gcagagaaagcacttcagtattt 48196
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>gb|AC121834.4| Mus musculus BAC clone RP24-72F20 from chromosome 5, complete sequence
          Length = 226382

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     agcagagaaagcacttcag 27
             |||||||||||||||||||
Sbjct: 27641 agcagagaaagcacttcag 27659


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,069,779
Number of Sequences: 3902068
Number of extensions: 1069779
Number of successful extensions: 74831
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74708
Number of HSP's gapped (non-prelim): 123
length of query: 139
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 118
effective length of database: 17,151,101,840
effective search space: 2023830017120
effective search space used: 2023830017120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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