ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags21n19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507356.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA Length = 1487 Score = 543 bits (274), Expect = e-151 Identities = 502/578 (86%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 |||||| |||| |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 511 cccgagctccccctcgtcatttccgactccgccgagtccatcgagaagacctcccaggcc 570 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||| | || ||||| | ||||||| ||| |||||||||||||||||||| || ||| Sbjct: 571 atcaagatcctgaagcaggtcggcgcctacgccgacgccgagaaggccaaggactccgtc 630 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| Sbjct: 631 ggcatccgccccggcaagggtaagatgcgcaaccgccgctacatcaaccgcaagggcccc 690 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 691 ctcatcgtctacggcaccgagggatccaagatcgtcaaggccttccgcaacctccccggc 750 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 |||||||| |||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 751 gtggatgtcgccaacgtcgagcgcctcaacctgctcgacctcgcacccggtggtcacctc 810 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgtacggctcc 361 || || || ||||||||||||||| |||||||||||||| || |||||||| ||| || Sbjct: 811 gggcgcttcgtgatctggaccgagagcgccttcaagaagcttgaggaggtgtatggcacc 870 Query: 362 tttgaggcgtcttcctccaagaagaagggcttcgtcctccccaggcctaagatgaccaac 421 || |||||| | || ||||||||||| ||| |||| || ||||| |||||| |||| Sbjct: 871 ttcgaggcgccgtcgctgaagaagaaggggttcatcctgccgaggcccaagatggccaat 930 Query: 422 gctgaccttggccgcctcatcaactctgacgaggtccagtctgttgtgaagcccatcaac 481 ||||| |||||| | ||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 931 gctgatcttggcaggatcatcaactctgatgaggtgcagtctgtggtgaagccgctcaac 990 Query: 482 aaggaggttaagcgcagggaggccaggaagaaccctctgaagaatgctgctgccgtgctc 541 |||||||| |||||||||||| ||||||||||| || ||||||| || || |||||| Sbjct: 991 aaggaggtcaagcgcagggagaagaggaagaacccgctcaagaatgtcgccgctgtgctc 1050 Query: 542 aagctcaacccctactttgggactgcccgcaggatggc 579 ||||||||||||||||| || ||||| |||| |||||| Sbjct: 1051 aagctcaacccctacttcggcactgcacgcaagatggc 1088
>ref|XM_476865.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1395 Score = 543 bits (274), Expect = e-151 Identities = 502/578 (86%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 |||||| |||| |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 515 cccgagctccccctcgtcatttccgactccgccgagtccatcgagaagacctcccaggcc 574 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||| | || ||||| | ||||||| ||| |||||||||||||||||||| || ||| Sbjct: 575 atcaagatcctgaagcaggtcggcgcctacgccgacgccgagaaggccaaggactccgtc 634 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| Sbjct: 635 ggcatccgccccggcaagggtaagatgcgcaaccgccgctacatcaaccgcaagggcccc 694 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 695 ctcatcgtctacggcaccgagggatccaagatcgtcaaggccttccgcaacctccccggc 754 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 |||||||| |||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 755 gtggatgtcgccaacgtcgagcgcctcaacctgctcgacctcgcacccggtggtcacctc 814 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgtacggctcc 361 || || || ||||||||||||||| |||||||||||||| || |||||||| ||| || Sbjct: 815 gggcgcttcgtgatctggaccgagagcgccttcaagaagcttgaggaggtgtatggcacc 874 Query: 362 tttgaggcgtcttcctccaagaagaagggcttcgtcctccccaggcctaagatgaccaac 421 || |||||| | || ||||||||||| ||| |||| || ||||| |||||| |||| Sbjct: 875 ttcgaggcgccgtcgctgaagaagaaggggttcatcctgccgaggcccaagatggccaat 934 Query: 422 gctgaccttggccgcctcatcaactctgacgaggtccagtctgttgtgaagcccatcaac 481 ||||| |||||| | ||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 935 gctgatcttggcaggatcatcaactctgatgaggtgcagtctgtggtgaagccgctcaac 994 Query: 482 aaggaggttaagcgcagggaggccaggaagaaccctctgaagaatgctgctgccgtgctc 541 |||||||| |||||||||||| ||||||||||| || ||||||| || || |||||| Sbjct: 995 aaggaggtcaagcgcagggagaagaggaagaacccgctcaagaatgtcgccgctgtgctc 1054 Query: 542 aagctcaacccctactttgggactgcccgcaggatggc 579 ||||||||||||||||| || ||||| |||| |||||| Sbjct: 1055 aagctcaacccctacttcggcactgcacgcaagatggc 1092
>ref|XM_507355.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA Length = 1641 Score = 543 bits (274), Expect = e-151 Identities = 502/578 (86%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 |||||| |||| |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 515 cccgagctccccctcgtcatttccgactccgccgagtccatcgagaagacctcccaggcc 574 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||| | || ||||| | ||||||| ||| |||||||||||||||||||| || ||| Sbjct: 575 atcaagatcctgaagcaggtcggcgcctacgccgacgccgagaaggccaaggactccgtc 634 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| Sbjct: 635 ggcatccgccccggcaagggtaagatgcgcaaccgccgctacatcaaccgcaagggcccc 694 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 695 ctcatcgtctacggcaccgagggatccaagatcgtcaaggccttccgcaacctccccggc 754 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 |||||||| |||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 755 gtggatgtcgccaacgtcgagcgcctcaacctgctcgacctcgcacccggtggtcacctc 814 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgtacggctcc 361 || || || ||||||||||||||| |||||||||||||| || |||||||| ||| || Sbjct: 815 gggcgcttcgtgatctggaccgagagcgccttcaagaagcttgaggaggtgtatggcacc 874 Query: 362 tttgaggcgtcttcctccaagaagaagggcttcgtcctccccaggcctaagatgaccaac 421 || |||||| | || ||||||||||| ||| |||| || ||||| |||||| |||| Sbjct: 875 ttcgaggcgccgtcgctgaagaagaaggggttcatcctgccgaggcccaagatggccaat 934 Query: 422 gctgaccttggccgcctcatcaactctgacgaggtccagtctgttgtgaagcccatcaac 481 ||||| |||||| | ||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 935 gctgatcttggcaggatcatcaactctgatgaggtgcagtctgtggtgaagccgctcaac 994 Query: 482 aaggaggttaagcgcagggaggccaggaagaaccctctgaagaatgctgctgccgtgctc 541 |||||||| |||||||||||| ||||||||||| || ||||||| || || |||||| Sbjct: 995 aaggaggtcaagcgcagggagaagaggaagaacccgctcaagaatgtcgccgctgtgctc 1054 Query: 542 aagctcaacccctactttgggactgcccgcaggatggc 579 ||||||||||||||||| || ||||| |||| |||||| Sbjct: 1055 aagctcaacccctacttcggcactgcacgcaagatggc 1092
>ref|XM_507354.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA Length = 1480 Score = 543 bits (274), Expect = e-151 Identities = 502/578 (86%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 |||||| |||| |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 516 cccgagctccccctcgtcatttccgactccgccgagtccatcgagaagacctcccaggcc 575 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||| | || ||||| | ||||||| ||| |||||||||||||||||||| || ||| Sbjct: 576 atcaagatcctgaagcaggtcggcgcctacgccgacgccgagaaggccaaggactccgtc 635 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| Sbjct: 636 ggcatccgccccggcaagggtaagatgcgcaaccgccgctacatcaaccgcaagggcccc 695 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 696 ctcatcgtctacggcaccgagggatccaagatcgtcaaggccttccgcaacctccccggc 755 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 |||||||| |||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 756 gtggatgtcgccaacgtcgagcgcctcaacctgctcgacctcgcacccggtggtcacctc 815 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgtacggctcc 361 || || || ||||||||||||||| |||||||||||||| || |||||||| ||| || Sbjct: 816 gggcgcttcgtgatctggaccgagagcgccttcaagaagcttgaggaggtgtatggcacc 875 Query: 362 tttgaggcgtcttcctccaagaagaagggcttcgtcctccccaggcctaagatgaccaac 421 || |||||| | || ||||||||||| ||| |||| || ||||| |||||| |||| Sbjct: 876 ttcgaggcgccgtcgctgaagaagaaggggttcatcctgccgaggcccaagatggccaat 935 Query: 422 gctgaccttggccgcctcatcaactctgacgaggtccagtctgttgtgaagcccatcaac 481 ||||| |||||| | ||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 936 gctgatcttggcaggatcatcaactctgatgaggtgcagtctgtggtgaagccgctcaac 995 Query: 482 aaggaggttaagcgcagggaggccaggaagaaccctctgaagaatgctgctgccgtgctc 541 |||||||| |||||||||||| ||||||||||| || ||||||| || || |||||| Sbjct: 996 aaggaggtcaagcgcagggagaagaggaagaacccgctcaagaatgtcgccgctgtgctc 1055 Query: 542 aagctcaacccctactttgggactgcccgcaggatggc 579 ||||||||||||||||| || ||||| |||| |||||| Sbjct: 1056 aagctcaacccctacttcggcactgcacgcaagatggc 1093
>ref|XM_506197.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA Length = 1486 Score = 543 bits (274), Expect = e-151 Identities = 502/578 (86%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 |||||| |||| |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 516 cccgagctccccctcgtcatttccgactccgccgagtccatcgagaagacctcccaggcc 575 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||| | || ||||| | ||||||| ||| |||||||||||||||||||| || ||| Sbjct: 576 atcaagatcctgaagcaggtcggcgcctacgccgacgccgagaaggccaaggactccgtc 635 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| Sbjct: 636 ggcatccgccccggcaagggtaagatgcgcaaccgccgctacatcaaccgcaagggcccc 695 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 696 ctcatcgtctacggcaccgagggatccaagatcgtcaaggccttccgcaacctccccggc 755 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 |||||||| |||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 756 gtggatgtcgccaacgtcgagcgcctcaacctgctcgacctcgcacccggtggtcacctc 815 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgtacggctcc 361 || || || ||||||||||||||| |||||||||||||| || |||||||| ||| || Sbjct: 816 gggcgcttcgtgatctggaccgagagcgccttcaagaagcttgaggaggtgtatggcacc 875 Query: 362 tttgaggcgtcttcctccaagaagaagggcttcgtcctccccaggcctaagatgaccaac 421 || |||||| | || ||||||||||| ||| |||| || ||||| |||||| |||| Sbjct: 876 ttcgaggcgccgtcgctgaagaagaaggggttcatcctgccgaggcccaagatggccaat 935 Query: 422 gctgaccttggccgcctcatcaactctgacgaggtccagtctgttgtgaagcccatcaac 481 ||||| |||||| | ||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 936 gctgatcttggcaggatcatcaactctgatgaggtgcagtctgtggtgaagccgctcaac 995 Query: 482 aaggaggttaagcgcagggaggccaggaagaaccctctgaagaatgctgctgccgtgctc 541 |||||||| |||||||||||| ||||||||||| || ||||||| || || |||||| Sbjct: 996 aaggaggtcaagcgcagggagaagaggaagaacccgctcaagaatgtcgccgctgtgctc 1055 Query: 542 aagctcaacccctactttgggactgcccgcaggatggc 579 ||||||||||||||||| || ||||| |||| |||||| Sbjct: 1056 aagctcaacccctacttcggcactgcacgcaagatggc 1093
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 543 bits (274), Expect = e-151 Identities = 502/578 (86%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 |||||| |||| |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 4295839 cccgagctccccctcgtcatttccgactccgccgagtccatcgagaagacctcccaggcc 4295898 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||| | || ||||| | ||||||| ||| |||||||||||||||||||| || ||| Sbjct: 4295899 atcaagatcctgaagcaggtcggcgcctacgccgacgccgagaaggccaaggactccgtc 4295958 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| Sbjct: 4295959 ggcatccgccccggcaagggtaagatgcgcaaccgccgctacatcaaccgcaagggcccc 4296018 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 4296019 ctcatcgtctacggcaccgagggatccaagatcgtcaaggccttccgcaacctccccggc 4296078 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 |||||||| |||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 4296079 gtggatgtcgccaacgtcgagcgcctcaacctgctcgacctcgcacccggtggtcacctc 4296138 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgtacggctcc 361 || || || ||||||||||||||| |||||||||||||| || |||||||| ||| || Sbjct: 4296139 gggcgcttcgtgatctggaccgagagcgccttcaagaagcttgaggaggtgtatggcacc 4296198 Query: 362 tttgaggcgtcttcctccaagaagaagggcttcgtcctccccaggcctaagatgaccaac 421 || |||||| | || ||||||||||| ||| |||| || ||||| |||||| |||| Sbjct: 4296199 ttcgaggcgccgtcgctgaagaagaaggggttcatcctgccgaggcccaagatggccaat 4296258 Query: 422 gctgaccttggccgcctcatcaactctgacgaggtccagtctgttgtgaagcccatcaac 481 ||||| |||||| | ||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 4296259 gctgatcttggcaggatcatcaactctgatgaggtgcagtctgtggtgaagccgctcaac 4296318 Query: 482 aaggaggttaagcgcagggaggccaggaagaaccctctgaagaatgctgctgccgtgctc 541 |||||||| |||||||||||| ||||||||||| || ||||||| || || |||||| Sbjct: 4296319 aaggaggtcaagcgcagggagaagaggaagaacccgctcaagaatgtcgccgctgtgctc 4296378 Query: 542 aagctcaacccctactttgggactgcccgcaggatggc 579 ||||||||||||||||| || ||||| |||| |||||| Sbjct: 4296379 aagctcaacccctacttcggcactgcacgcaagatggc 4296416
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 543 bits (274), Expect = e-151 Identities = 502/578 (86%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 |||||| |||| |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 116893 cccgagctccccctcgtcatttccgactccgccgagtccatcgagaagacctcccaggcc 116952 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||| | || ||||| | ||||||| ||| |||||||||||||||||||| || ||| Sbjct: 116953 atcaagatcctgaagcaggtcggcgcctacgccgacgccgagaaggccaaggactccgtc 117012 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| Sbjct: 117013 ggcatccgccccggcaagggtaagatgcgcaaccgccgctacatcaaccgcaagggcccc 117072 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 117073 ctcatcgtctacggcaccgagggatccaagatcgtcaaggccttccgcaacctccccggc 117132 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 |||||||| |||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 117133 gtggatgtcgccaacgtcgagcgcctcaacctgctcgacctcgcacccggtggtcacctc 117192 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgtacggctcc 361 || || || ||||||||||||||| |||||||||||||| || |||||||| ||| || Sbjct: 117193 gggcgcttcgtgatctggaccgagagcgccttcaagaagcttgaggaggtgtatggcacc 117252 Query: 362 tttgaggcgtcttcctccaagaagaagggcttcgtcctccccaggcctaagatgaccaac 421 || |||||| | || ||||||||||| ||| |||| || ||||| |||||| |||| Sbjct: 117253 ttcgaggcgccgtcgctgaagaagaaggggttcatcctgccgaggcccaagatggccaat 117312 Query: 422 gctgaccttggccgcctcatcaactctgacgaggtccagtctgttgtgaagcccatcaac 481 ||||| |||||| | ||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 117313 gctgatcttggcaggatcatcaactctgatgaggtgcagtctgtggtgaagccgctcaac 117372 Query: 482 aaggaggttaagcgcagggaggccaggaagaaccctctgaagaatgctgctgccgtgctc 541 |||||||| |||||||||||| ||||||||||| || ||||||| || || |||||| Sbjct: 117373 aaggaggtcaagcgcagggagaagaggaagaacccgctcaagaatgtcgccgctgtgctc 117432 Query: 542 aagctcaacccctactttgggactgcccgcaggatggc 579 ||||||||||||||||| || ||||| |||| |||||| Sbjct: 117433 aagctcaacccctacttcggcactgcacgcaagatggc 117470
>dbj|AK104504.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F06, full insert sequence Length = 1486 Score = 543 bits (274), Expect = e-151 Identities = 502/578 (86%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 |||||| |||| |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 516 cccgagctccccctcgtcatttccgactccgccgagtccatcgagaagacctcccaggcc 575 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||| | || ||||| | ||||||| ||| |||||||||||||||||||| || ||| Sbjct: 576 atcaagatcctgaagcaggtcggcgcctacgccgacgccgagaaggccaaggactccgtc 635 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| Sbjct: 636 ggcatccgccccggcaagggtaagatgcgcaaccgccgctacatcaaccgcaagggcccc 695 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 696 ctcatcgtctacggcaccgagggatccaagatcgtcaaggccttccgcaacctccccggc 755 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 |||||||| |||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 756 gtggatgtcgccaacgtcgagcgcctcaacctgctcgacctcgcacccggtggtcacctc 815 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgtacggctcc 361 || || || ||||||||||||||| |||||||||||||| || |||||||| ||| || Sbjct: 816 gggcgcttcgtgatctggaccgagagcgccttcaagaagcttgaggaggtgtatggcacc 875 Query: 362 tttgaggcgtcttcctccaagaagaagggcttcgtcctccccaggcctaagatgaccaac 421 || |||||| | || ||||||||||| ||| |||| || ||||| |||||| |||| Sbjct: 876 ttcgaggcgccgtcgctgaagaagaaggggttcatcctgccgaggcccaagatggccaat 935 Query: 422 gctgaccttggccgcctcatcaactctgacgaggtccagtctgttgtgaagcccatcaac 481 ||||| |||||| | ||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 936 gctgatcttggcaggatcatcaactctgatgaggtgcagtctgtggtgaagccgctcaac 995 Query: 482 aaggaggttaagcgcagggaggccaggaagaaccctctgaagaatgctgctgccgtgctc 541 |||||||| |||||||||||| ||||||||||| || ||||||| || || |||||| Sbjct: 996 aaggaggtcaagcgcagggagaagaggaagaacccgctcaagaatgtcgccgctgtgctc 1055 Query: 542 aagctcaacccctactttgggactgcccgcaggatggc 579 ||||||||||||||||| || ||||| |||| |||||| Sbjct: 1056 aagctcaacccctacttcggcactgcacgcaagatggc 1093
>dbj|AK104629.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C02, full insert sequence Length = 1487 Score = 543 bits (274), Expect = e-151 Identities = 502/578 (86%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 |||||| |||| |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 511 cccgagctccccctcgtcatttccgactccgccgagtccatcgagaagacctcccaggcc 570 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||| | || ||||| | ||||||| ||| |||||||||||||||||||| || ||| Sbjct: 571 atcaagatcctgaagcaggtcggcgcctacgccgacgccgagaaggccaaggactccgtc 630 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| Sbjct: 631 ggcatccgccccggcaagggtaagatgcgcaaccgccgctacatcaaccgcaagggcccc 690 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 691 ctcatcgtctacggcaccgagggatccaagatcgtcaaggccttccgcaacctccccggc 750 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 |||||||| |||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 751 gtggatgtcgccaacgtcgagcgcctcaacctgctcgacctcgcacccggtggtcacctc 810 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgtacggctcc 361 || || || ||||||||||||||| |||||||||||||| || |||||||| ||| || Sbjct: 811 gggcgcttcgtgatctggaccgagagcgccttcaagaagcttgaggaggtgtatggcacc 870 Query: 362 tttgaggcgtcttcctccaagaagaagggcttcgtcctccccaggcctaagatgaccaac 421 || |||||| | || ||||||||||| ||| |||| || ||||| |||||| |||| Sbjct: 871 ttcgaggcgccgtcgctgaagaagaaggggttcatcctgccgaggcccaagatggccaat 930 Query: 422 gctgaccttggccgcctcatcaactctgacgaggtccagtctgttgtgaagcccatcaac 481 ||||| |||||| | ||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 931 gctgatcttggcaggatcatcaactctgatgaggtgcagtctgtggtgaagccgctcaac 990 Query: 482 aaggaggttaagcgcagggaggccaggaagaaccctctgaagaatgctgctgccgtgctc 541 |||||||| |||||||||||| ||||||||||| || ||||||| || || |||||| Sbjct: 991 aaggaggtcaagcgcagggagaagaggaagaacccgctcaagaatgtcgccgctgtgctc 1050 Query: 542 aagctcaacccctactttgggactgcccgcaggatggc 579 ||||||||||||||||| || ||||| |||| |||||| Sbjct: 1051 aagctcaacccctacttcggcactgcacgcaagatggc 1088
>dbj|AK104447.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B12, full insert sequence Length = 1480 Score = 543 bits (274), Expect = e-151 Identities = 502/578 (86%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 |||||| |||| |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 516 cccgagctccccctcgtcatttccgactccgccgagtccatcgagaagacctcccaggcc 575 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||| | || ||||| | ||||||| ||| |||||||||||||||||||| || ||| Sbjct: 576 atcaagatcctgaagcaggtcggcgcctacgccgacgccgagaaggccaaggactccgtc 635 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| Sbjct: 636 ggcatccgccccggcaagggtaagatgcgcaaccgccgctacatcaaccgcaagggcccc 695 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 696 ctcatcgtctacggcaccgagggatccaagatcgtcaaggccttccgcaacctccccggc 755 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 |||||||| |||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 756 gtggatgtcgccaacgtcgagcgcctcaacctgctcgacctcgcacccggtggtcacctc 815 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgtacggctcc 361 || || || ||||||||||||||| |||||||||||||| || |||||||| ||| || Sbjct: 816 gggcgcttcgtgatctggaccgagagcgccttcaagaagcttgaggaggtgtatggcacc 875 Query: 362 tttgaggcgtcttcctccaagaagaagggcttcgtcctccccaggcctaagatgaccaac 421 || |||||| | || ||||||||||| ||| |||| || ||||| |||||| |||| Sbjct: 876 ttcgaggcgccgtcgctgaagaagaaggggttcatcctgccgaggcccaagatggccaat 935 Query: 422 gctgaccttggccgcctcatcaactctgacgaggtccagtctgttgtgaagcccatcaac 481 ||||| |||||| | ||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 936 gctgatcttggcaggatcatcaactctgatgaggtgcagtctgtggtgaagccgctcaac 995 Query: 482 aaggaggttaagcgcagggaggccaggaagaaccctctgaagaatgctgctgccgtgctc 541 |||||||| |||||||||||| ||||||||||| || ||||||| || || |||||| Sbjct: 996 aaggaggtcaagcgcagggagaagaggaagaacccgctcaagaatgtcgccgctgtgctc 1055 Query: 542 aagctcaacccctactttgggactgcccgcaggatggc 579 ||||||||||||||||| || ||||| |||| |||||| Sbjct: 1056 aagctcaacccctacttcggcactgcacgcaagatggc 1093
>dbj|AK060963.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-A09, full insert sequence Length = 1395 Score = 543 bits (274), Expect = e-151 Identities = 502/578 (86%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 |||||| |||| |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 515 cccgagctccccctcgtcatttccgactccgccgagtccatcgagaagacctcccaggcc 574 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||| | || ||||| | ||||||| ||| |||||||||||||||||||| || ||| Sbjct: 575 atcaagatcctgaagcaggtcggcgcctacgccgacgccgagaaggccaaggactccgtc 634 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| Sbjct: 635 ggcatccgccccggcaagggtaagatgcgcaaccgccgctacatcaaccgcaagggcccc 694 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 695 ctcatcgtctacggcaccgagggatccaagatcgtcaaggccttccgcaacctccccggc 754 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 |||||||| |||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 755 gtggatgtcgccaacgtcgagcgcctcaacctgctcgacctcgcacccggtggtcacctc 814 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgtacggctcc 361 || || || ||||||||||||||| |||||||||||||| || |||||||| ||| || Sbjct: 815 gggcgcttcgtgatctggaccgagagcgccttcaagaagcttgaggaggtgtatggcacc 874 Query: 362 tttgaggcgtcttcctccaagaagaagggcttcgtcctccccaggcctaagatgaccaac 421 || |||||| | || ||||||||||| ||| |||| || ||||| |||||| |||| Sbjct: 875 ttcgaggcgccgtcgctgaagaagaaggggttcatcctgccgaggcccaagatggccaat 934 Query: 422 gctgaccttggccgcctcatcaactctgacgaggtccagtctgttgtgaagcccatcaac 481 ||||| |||||| | ||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 935 gctgatcttggcaggatcatcaactctgatgaggtgcagtctgtggtgaagccgctcaac 994 Query: 482 aaggaggttaagcgcagggaggccaggaagaaccctctgaagaatgctgctgccgtgctc 541 |||||||| |||||||||||| ||||||||||| || ||||||| || || |||||| Sbjct: 995 aaggaggtcaagcgcagggagaagaggaagaacccgctcaagaatgtcgccgctgtgctc 1054 Query: 542 aagctcaacccctactttgggactgcccgcaggatggc 579 ||||||||||||||||| || ||||| |||| |||||| Sbjct: 1055 aagctcaacccctacttcggcactgcacgcaagatggc 1092
>dbj|AK060711.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B02, full insert sequence Length = 1641 Score = 543 bits (274), Expect = e-151 Identities = 502/578 (86%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 |||||| |||| |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 515 cccgagctccccctcgtcatttccgactccgccgagtccatcgagaagacctcccaggcc 574 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||| | || ||||| | ||||||| ||| |||||||||||||||||||| || ||| Sbjct: 575 atcaagatcctgaagcaggtcggcgcctacgccgacgccgagaaggccaaggactccgtc 634 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| Sbjct: 635 ggcatccgccccggcaagggtaagatgcgcaaccgccgctacatcaaccgcaagggcccc 694 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 695 ctcatcgtctacggcaccgagggatccaagatcgtcaaggccttccgcaacctccccggc 754 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 |||||||| |||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 755 gtggatgtcgccaacgtcgagcgcctcaacctgctcgacctcgcacccggtggtcacctc 814 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgtacggctcc 361 || || || ||||||||||||||| |||||||||||||| || |||||||| ||| || Sbjct: 815 gggcgcttcgtgatctggaccgagagcgccttcaagaagcttgaggaggtgtatggcacc 874 Query: 362 tttgaggcgtcttcctccaagaagaagggcttcgtcctccccaggcctaagatgaccaac 421 || |||||| | || ||||||||||| ||| |||| || ||||| |||||| |||| Sbjct: 875 ttcgaggcgccgtcgctgaagaagaaggggttcatcctgccgaggcccaagatggccaat 934 Query: 422 gctgaccttggccgcctcatcaactctgacgaggtccagtctgttgtgaagcccatcaac 481 ||||| |||||| | ||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 935 gctgatcttggcaggatcatcaactctgatgaggtgcagtctgtggtgaagccgctcaac 994 Query: 482 aaggaggttaagcgcagggaggccaggaagaaccctctgaagaatgctgctgccgtgctc 541 |||||||| |||||||||||| ||||||||||| || ||||||| || || |||||| Sbjct: 995 aaggaggtcaagcgcagggagaagaggaagaacccgctcaagaatgtcgccgctgtgctc 1054 Query: 542 aagctcaacccctactttgggactgcccgcaggatggc 579 ||||||||||||||||| || ||||| |||| |||||| Sbjct: 1055 aagctcaacccctacttcggcactgcacgcaagatggc 1092
>gb|BT016602.1| Zea mays clone Contig435 mRNA sequence Length = 1376 Score = 442 bits (223), Expect = e-121 Identities = 475/559 (84%) Strand = Plus / Plus Query: 21 tctccgactcggccgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagc 80 ||||||||||||| ||| ||||||||||||||||||||| | ||| | ||| ||||| Sbjct: 508 tctccgactcggcggagtccatcgagaagacctcccaggcgctaaagatcctcaagcagg 567 Query: 81 tgggcgccttcgctgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagg 140 | ||||||| ||| |||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 568 tcggcgcctacgccgacgccgagaaggccaaggactccgtcggcatccgccccggcaagg 627 Query: 141 gtaagatgcgcaaccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccg 200 ||||||||||||||||| | ||||| ||||||||||| || ||| ||||||||||||| | Sbjct: 628 gtaagatgcgcaaccgccgctacattaaccgcaagggcccgctcgtcgtctacggcacag 687 Query: 201 agggctccaagatcgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcg 260 | ||||||||| ||||||||||||||||||||||||| || ||||| || |||||||||| Sbjct: 688 aaggctccaaggtcgtcaaggccttccgcaacctccccggcgtggacgtcgccaacgtcg 747 Query: 261 agcgcctcaacctgctcgaccttgcccctggtggccaccttggccggtttgtgatctgga 320 |||||||||||||||||||||| ||||| ||||||||||| || || ||||||||||||| Sbjct: 748 agcgcctcaacctgctcgacctcgcccccggtggccacctcgggcgctttgtgatctgga 807 Query: 321 ccgagtctgccttcaagaagctggacgaggtgtacggctcctttgaggcgtcttcctcca 380 ||||| || ||||||||||| || |||||||| || |||||| ||| | || | Sbjct: 808 ccgagagcgcgttcaagaagctcgaggaggtgtatgggagctttgacgcgccgtcgcaga 867 Query: 381 agaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctca 440 ||||||||||||| || || || ||||| |||||| ||||||||||||| ||| | | | Sbjct: 868 agaagaagggctttgttctgccgaggcccaagatggccaacgctgacctgggcaggatta 927 Query: 441 tcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcaggg 500 |||||||||||||||| |||||||| || ||||| ||||||||||||| |||||||||| Sbjct: 928 tcaactctgacgaggtgcagtctgtggttaagccactcaacaaggaggtgaagcgcaggg 987 Query: 501 aggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccctactttg 560 || ||||||||||| || | ||| ||||| ||||||||||| ||||||||| | | Sbjct: 988 agaagaggaagaacccgctcacgaacatggctgctgtgctcaagctgaacccctacctcg 1047 Query: 561 ggactgcccgcaggatggc 579 | |||||||| | |||||| Sbjct: 1048 gcactgcccggaagatggc 1066
>ref|NM_185075.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1464 Score = 367 bits (185), Expect = 3e-98 Identities = 311/353 (88%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 ||||||||||||||||||||||| ||||| |||| |||||||||||| | ||| || Sbjct: 503 cccgagttcccgctcgtcgtctcggactccatcgagtccatcgagaagactgcgcagtcc 562 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||||| ||| ||||| | || |||| |||||| ||||||||| ||||||| || || Sbjct: 563 atcaaggtcctcaagcagattggtgcctacgctgatgccgagaagaccaaggattcggtg 622 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 | ||||||| | |||||||| ||||||||||||||| |||||||||| |||||||| ||| Sbjct: 623 gccatccgcgctggcaaggggaagatgcgcaaccgccggtacatcaatcgcaagggcccc 682 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||| |||||||||| |||||||||||||| || Sbjct: 683 ctcatcgtctacggcaccgagggttccaaggtcgtcaaggctttccgcaacctccccggc 742 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 || ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 gttgatgttgccaatgtggagcgcctcaacctgctcgaccttgcccctggtggccacctt 802 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgta 354 ||||| || |||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 803 ggccgcttcgtgatctggaccgagtgcgcgttcaagaagctcgacgaggtgta 855 Score = 163 bits (82), Expect = 8e-37 Identities = 181/214 (84%) Strand = Plus / Plus Query: 380 aagaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctc 439 ||||||||||||||||| ||||| ||||| |||||| | || || ||||| | | || Sbjct: 881 aagaagaagggcttcgtgctcccgaggccgaagatggcgaatgccgacctgtccaggctg 940 Query: 440 atcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagg 499 |||||||| || ||||||||||| || ||||||||||||||||||||||| |||| |||| Sbjct: 941 atcaactccgatgaggtccagtcggtggtgaagcccatcaacaaggaggtgaagctcagg 1000 Query: 500 gaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccctacttt 559 ||||| || | ||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 1001 gaggcgagaaggaaccctctgaagaatgtggccgctgtgctcaagctgaacccctacttc 1060 Query: 560 gggactgcccgcaggatggcagttcttgctgagg 593 || ||||| |||| |||||||| ||| ||||||| Sbjct: 1061 ggcactgcgcgcaagatggcagctctcgctgagg 1094
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 367 bits (185), Expect = 3e-98 Identities = 311/353 (88%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 ||||||||||||||||||||||| ||||| |||| |||||||||||| | ||| || Sbjct: 37927 cccgagttcccgctcgtcgtctcggactccatcgagtccatcgagaagactgcgcagtcc 37986 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||||| ||| ||||| | || |||| |||||| ||||||||| ||||||| || || Sbjct: 37987 atcaaggtcctcaagcagattggtgcctacgctgatgccgagaagaccaaggattcggtg 38046 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 | ||||||| | |||||||| ||||||||||||||| |||||||||| |||||||| ||| Sbjct: 38047 gccatccgcgctggcaaggggaagatgcgcaaccgccggtacatcaatcgcaagggcccc 38106 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||| |||||||||| |||||||||||||| || Sbjct: 38107 ctcatcgtctacggcaccgagggttccaaggtcgtcaaggctttccgcaacctccccggc 38166 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 || ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 38167 gttgatgttgccaatgtggagcgcctcaacctgctcgaccttgcccctggtggccacctt 38226 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgta 354 ||||| || |||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 38227 ggccgcttcgtgatctggaccgagtgcgcgttcaagaagctcgacgaggtgta 38279 Score = 163 bits (82), Expect = 8e-37 Identities = 181/214 (84%) Strand = Plus / Plus Query: 380 aagaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctc 439 ||||||||||||||||| ||||| ||||| |||||| | || || ||||| | | || Sbjct: 38305 aagaagaagggcttcgtgctcccgaggccgaagatggcgaatgccgacctgtccaggctg 38364 Query: 440 atcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagg 499 |||||||| || ||||||||||| || ||||||||||||||||||||||| |||| |||| Sbjct: 38365 atcaactccgatgaggtccagtcggtggtgaagcccatcaacaaggaggtgaagctcagg 38424 Query: 500 gaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccctacttt 559 ||||| || | ||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 38425 gaggcgagaaggaaccctctgaagaatgtggccgctgtgctcaagctgaacccctacttc 38484 Query: 560 gggactgcccgcaggatggcagttcttgctgagg 593 || ||||| |||| |||||||| ||| ||||||| Sbjct: 38485 ggcactgcgcgcaagatggcagctctcgctgagg 38518
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 367 bits (185), Expect = 3e-98 Identities = 311/353 (88%) Strand = Plus / Minus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 ||||||||||||||||||||||| ||||| |||| |||||||||||| | ||| || Sbjct: 32841614 cccgagttcccgctcgtcgtctcggactccatcgagtccatcgagaagactgcgcagtcc 32841555 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||||| ||| ||||| | || |||| |||||| ||||||||| ||||||| || || Sbjct: 32841554 atcaaggtcctcaagcagattggtgcctacgctgatgccgagaagaccaaggattcggtg 32841495 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 | ||||||| | |||||||| ||||||||||||||| |||||||||| |||||||| ||| Sbjct: 32841494 gccatccgcgctggcaaggggaagatgcgcaaccgccggtacatcaatcgcaagggcccc 32841435 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||| |||||||||| |||||||||||||| || Sbjct: 32841434 ctcatcgtctacggcaccgagggttccaaggtcgtcaaggctttccgcaacctccccggc 32841375 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 || ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 32841374 gttgatgttgccaatgtggagcgcctcaacctgctcgaccttgcccctggtggccacctt 32841315 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgta 354 ||||| || |||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 32841314 ggccgcttcgtgatctggaccgagtgcgcgttcaagaagctcgacgaggtgta 32841262 Score = 163 bits (82), Expect = 8e-37 Identities = 181/214 (84%) Strand = Plus / Minus Query: 380 aagaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctc 439 ||||||||||||||||| ||||| ||||| |||||| | || || ||||| | | || Sbjct: 32841236 aagaagaagggcttcgtgctcccgaggccgaagatggcgaatgccgacctgtccaggctg 32841177 Query: 440 atcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagg 499 |||||||| || ||||||||||| || ||||||||||||||||||||||| |||| |||| Sbjct: 32841176 atcaactccgatgaggtccagtcggtggtgaagcccatcaacaaggaggtgaagctcagg 32841117 Query: 500 gaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccctacttt 559 ||||| || | ||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 32841116 gaggcgagaaggaaccctctgaagaatgtggccgctgtgctcaagctgaacccctacttc 32841057 Query: 560 gggactgcccgcaggatggcagttcttgctgagg 593 || ||||| |||| |||||||| ||| ||||||| Sbjct: 32841056 ggcactgcgcgcaagatggcagctctcgctgagg 32841023
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 367 bits (185), Expect = 3e-98 Identities = 311/353 (88%) Strand = Plus / Plus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 ||||||||||||||||||||||| ||||| |||| |||||||||||| | ||| || Sbjct: 148561 cccgagttcccgctcgtcgtctcggactccatcgagtccatcgagaagactgcgcagtcc 148620 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||||| ||| ||||| | || |||| |||||| ||||||||| ||||||| || || Sbjct: 148621 atcaaggtcctcaagcagattggtgcctacgctgatgccgagaagaccaaggattcggtg 148680 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 | ||||||| | |||||||| ||||||||||||||| |||||||||| |||||||| ||| Sbjct: 148681 gccatccgcgctggcaaggggaagatgcgcaaccgccggtacatcaatcgcaagggcccc 148740 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||| |||||||||| |||||||||||||| || Sbjct: 148741 ctcatcgtctacggcaccgagggttccaaggtcgtcaaggctttccgcaacctccccggc 148800 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 || ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 148801 gttgatgttgccaatgtggagcgcctcaacctgctcgaccttgcccctggtggccacctt 148860 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgta 354 ||||| || |||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 148861 ggccgcttcgtgatctggaccgagtgcgcgttcaagaagctcgacgaggtgta 148913 Score = 163 bits (82), Expect = 8e-37 Identities = 181/214 (84%) Strand = Plus / Plus Query: 380 aagaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctc 439 ||||||||||||||||| ||||| ||||| |||||| | || || ||||| | | || Sbjct: 148939 aagaagaagggcttcgtgctcccgaggccgaagatggcgaatgccgacctgtccaggctg 148998 Query: 440 atcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagg 499 |||||||| || ||||||||||| || ||||||||||||||||||||||| |||| |||| Sbjct: 148999 atcaactccgatgaggtccagtcggtggtgaagcccatcaacaaggaggtgaagctcagg 149058 Query: 500 gaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccctacttt 559 ||||| || | ||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 149059 gaggcgagaaggaaccctctgaagaatgtggccgctgtgctcaagctgaacccctacttc 149118 Query: 560 gggactgcccgcaggatggcagttcttgctgagg 593 || ||||| |||| |||||||| ||| ||||||| Sbjct: 149119 ggcactgcgcgcaagatggcagctctcgctgagg 149152
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 367 bits (185), Expect = 3e-98 Identities = 311/353 (88%) Strand = Plus / Minus Query: 2 cccgagttcccgctcgtcgtctccgactcggccgagggcatcgagaagacctcccaggcc 61 ||||||||||||||||||||||| ||||| |||| |||||||||||| | ||| || Sbjct: 32932124 cccgagttcccgctcgtcgtctcggactccatcgagtccatcgagaagactgcgcagtcc 32932065 Query: 62 atcaaggtgctcgagcagctgggcgccttcgctgacgccgagaaggccaaggagtctgtc 121 |||||||| ||| ||||| | || |||| |||||| ||||||||| ||||||| || || Sbjct: 32932064 atcaaggtcctcaagcagattggtgcctacgctgatgccgagaagaccaaggattcggtg 32932005 Query: 122 ggcatccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggaccc 181 | ||||||| | |||||||| ||||||||||||||| |||||||||| |||||||| ||| Sbjct: 32932004 gccatccgcgctggcaaggggaagatgcgcaaccgccggtacatcaatcgcaagggcccc 32931945 Query: 182 ctcatcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggt 241 ||||||||||||||||||||||| |||||| |||||||||| |||||||||||||| || Sbjct: 32931944 ctcatcgtctacggcaccgagggttccaaggtcgtcaaggctttccgcaacctccccggc 32931885 Query: 242 gtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccacctt 301 || ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 32931884 gttgatgttgccaatgtggagcgcctcaacctgctcgaccttgcccctggtggccacctt 32931825 Query: 302 ggccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgta 354 ||||| || |||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 32931824 ggccgcttcgtgatctggaccgagtgcgcgttcaagaagctcgacgaggtgta 32931772 Score = 163 bits (82), Expect = 8e-37 Identities = 181/214 (84%) Strand = Plus / Minus Query: 380 aagaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctc 439 ||||||||||||||||| ||||| ||||| |||||| | || || ||||| | | || Sbjct: 32931746 aagaagaagggcttcgtgctcccgaggccgaagatggcgaatgccgacctgtccaggctg 32931687 Query: 440 atcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagg 499 |||||||| || ||||||||||| || ||||||||||||||||||||||| |||| |||| Sbjct: 32931686 atcaactccgatgaggtccagtcggtggtgaagcccatcaacaaggaggtgaagctcagg 32931627 Query: 500 gaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccctacttt 559 ||||| || | ||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 32931626 gaggcgagaaggaaccctctgaagaatgtggccgctgtgctcaagctgaacccctacttc 32931567 Query: 560 gggactgcccgcaggatggcagttcttgctgagg 593 || ||||| |||| |||||||| ||| ||||||| Sbjct: 32931566 ggcactgcgcgcaagatggcagctctcgctgagg 32931533
>gb|BT016670.1| Zea mays clone Contig503 mRNA sequence Length = 1384 Score = 365 bits (184), Expect = 1e-97 Identities = 271/300 (90%) Strand = Plus / Plus Query: 23 tccgactcggccgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctg 82 |||||||| || ||| ||| ||||||||||||||||| ||||| | ||| ||||| | Sbjct: 506 tccgactccgcggagtccattgagaagacctcccaggcgctcaagatcctcaagcagatc 565 Query: 83 ggcgccttcgctgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggt 142 |||||| ||| |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 566 ggcgcccacgccgacgccgagaaggccaaggactccgtcggcatccgccccggcaagggt 625 Query: 143 aagatgcgcaaccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgag 202 ||||||||||||||| | ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 626 aagatgcgcaaccgccgctacatcaaccgcaagggcccgctcatcgtctacggcaccgag 685 Query: 203 ggctccaagatcgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgag 262 ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 686 ggctccaaggtcgtcaaggccttccgcaaccttcccggtgtggatgttgccaacgtcgag 745 Query: 263 cgcctcaacctgctcgaccttgcccctggtggccaccttggccggtttgtgatctggacc 322 ||||||||||| || ||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 746 cgcctcaacctactagaccttgcccccggtggccaccttgggcgctttgtgatctggacc 805 Score = 167 bits (84), Expect = 5e-38 Identities = 171/200 (85%) Strand = Plus / Plus Query: 380 aagaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctc 439 ||||||||||||||||| || || |||||||||||| ||||||||||||| ||| | || Sbjct: 863 aagaagaagggcttcgtgctgccgaggcctaagatgtccaacgctgacctgggcaggatc 922 Query: 440 atcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagg 499 ||||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||| Sbjct: 923 atcaactctgacgaggtgcagtctgtggtgaagccactcaacaaggaggtgaagcgcagg 982 Query: 500 gaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccctacttt 559 ||| ||||||||||| || ||||| ||||| |||||||| |||||||||||| | Sbjct: 983 gagaagaggaagaacccactcaagaacatggctgctgtgctcaaactcaacccctacctg 1042 Query: 560 gggactgcccgcaggatggc 579 || |||||||| | |||||| Sbjct: 1043 ggcactgcccggaagatggc 1062
>gb|AY109806.1| Zea mays CL21852_1 mRNA sequence Length = 863 Score = 281 bits (142), Expect = 1e-72 Identities = 212/234 (90%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 124 catccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggacccct 183 ||||||||||| |||||| |||||||||| |||| | ||||||||||||||||||||||| Sbjct: 27 catccgccccg-caaggggaagatgcgcagccgccgctacatcaaccgcaagggacccct 85 Query: 184 catcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggtgt 243 ||| ||||||||| | |||||||| ||||||||||||||||||||||||||||| || || Sbjct: 86 cattgtctacggcgctgagggctctaagatcgtcaaggccttccgcaacctccctggcgt 145 Query: 244 ggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccaccttgg 303 ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 146 tgatgttgccaatgtcgagcgcctgaacctgctcgacctcgcccctggtggccaccttgg 205 Query: 304 ccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgtacgg 357 ||||| || ||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 206 tcggttcgtcatctggaccgagtgcgcattcaagaagctggatgaggtgtacgg 259 Score = 129 bits (65), Expect = 1e-26 Identities = 125/145 (86%) Strand = Plus / Plus Query: 437 ctcatcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgc 496 |||||||||||||||||||| || ||||| ||||||||||||||||||||||| ||||| Sbjct: 339 ctcatcaactctgacgaggtgcaatctgtggtgaagcccatcaacaaggaggtgaagcgt 398 Query: 497 agggaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccctac 556 |||||| | ||||||||||| ||||||||| ||||| ||||||||||| ||||| ||| Sbjct: 399 agggagcctaggaagaacccgctgaagaatatggctgcagtgctcaagctgaacccgtac 458 Query: 557 tttgggactgcccgcaggatggcag 581 | || ||||| || | |||||||| Sbjct: 459 ctcggtactgcacgaaagatggcag 483
>gb|DQ363993.1| Saccharum hybrid cultivar putative 60S ribosomal protein L1 mRNA, partial cds Length = 212 Score = 149 bits (75), Expect = 1e-32 Identities = 150/175 (85%) Strand = Plus / Plus Query: 380 aagaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctc 439 ||||||||||||||||| || || ||||| ||||||||||||||||| || ||| | || Sbjct: 38 aagaagaagggcttcgttctgcctaggcccaagatgaccaacgctgatctgggcaggatc 97 Query: 440 atcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagg 499 ||||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||| Sbjct: 98 atcaactctgacgaggtgcagtctgtggtgaagccactcaacaaggaggtgaagcgcagg 157 Query: 500 gaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccct 554 ||| |||||||||| || ||||| ||||| ||||||||||||||||||| Sbjct: 158 gagaagcggaagaacccgctcaagaacatggctgctgtgctcaagctcaacccct 212
>ref|NM_111797.2| Arabidopsis thaliana structural constituent of ribosome AT3G09630 transcript variant AT3G09630.1 mRNA, complete cds Length = 1560 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 281 cttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaag 340 ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| ||||| Sbjct: 806 cttgctcctggtggtcaccttggtcggtttgtgatctggaccaagtctgcctttgagaag 865 Query: 341 ct 342 || Sbjct: 866 ct 867
>ref|NM_001035586.1| Arabidopsis thaliana structural constituent of ribosome AT3G09630 transcript variant AT3G09630.2 mRNA, complete cds Length = 1598 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 281 cttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaag 340 ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| ||||| Sbjct: 812 cttgctcctggtggtcaccttggtcggtttgtgatctggaccaagtctgcctttgagaag 871 Query: 341 ct 342 || Sbjct: 872 ct 873
>gb|BT008495.1| Arabidopsis thaliana At3g09630 gene, complete cds Length = 1221 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 281 cttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaag 340 ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| ||||| Sbjct: 736 cttgctcctggtggtcaccttggtcggtttgtgatctggaccaagtctgcctttgagaag 795 Query: 341 ct 342 || Sbjct: 796 ct 797
>gb|AY056781.1| Arabidopsis thaliana AT3g09630/F11F8_22 mRNA, complete cds Length = 1416 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 281 cttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaag 340 ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| ||||| Sbjct: 803 cttgctcctggtggtcaccttggtcggtttgtgatctggaccaagtctgcctttgagaag 862 Query: 341 ct 342 || Sbjct: 863 ct 864
>gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11F8 genomic sequence, complete sequence Length = 107603 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 281 cttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaag 340 ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| ||||| Sbjct: 52921 cttgctcctggtggtcaccttggtcggtttgtgatctggaccaagtctgcctttgagaag 52980 Query: 341 ct 342 || Sbjct: 52981 ct 52982
>gb|AY087963.1| Arabidopsis thaliana clone 39947 mRNA, complete sequence Length = 1406 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 281 cttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaag 340 ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| ||||| Sbjct: 806 cttgctcctggtggtcaccttggtcggtttgtgatctggaccaagtctgcctttgagaag 865 Query: 341 ct 342 || Sbjct: 866 ct 867
>gb|BT002438.1| Arabidopsis thaliana putative 60S ribosomal protein L1 (At3g09630) mRNA, complete cds Length = 1437 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 281 cttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaag 340 ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| ||||| Sbjct: 804 cttgctcctggtggtcaccttggtcggtttgtgatctggaccaagtctgcctttgagaag 863 Query: 341 ct 342 || Sbjct: 864 ct 865
>ref|XM_753952.1| Ustilago maydis 521 hypothetical protein (UM02898.1) partial mRNA Length = 1002 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 260 gagcgcctcaacctgctcgaccttgcccctggtggccaccttggccggtttgtgatct 317 |||||||| ||||||||| | || ||||||||||| ||||||||||| ||||| |||| Sbjct: 604 gagcgcctgaacctgctccagctcgcccctggtggacaccttggccgctttgtcatct 661
>ref|NM_059015.2| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-4) (rpl-4) mRNA, complete cds Length = 1083 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 314 atctggaccgagtctgccttcaagaagct 342 ||||||||||||||||||||||||||||| Sbjct: 756 atctggaccgagtctgccttcaagaagct 784
>gb|AF000196.1| Caenorhabditis elegans cosmid B0041, complete sequence Length = 28609 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 314 atctggaccgagtctgccttcaagaagct 342 ||||||||||||||||||||||||||||| Sbjct: 2890 atctggaccgagtctgccttcaagaagct 2862
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 256 cgtcgagcgcctcaacctgctcgaccttgcccctggtggccaccttggccggtttgtgat 315 ||||||| ||||||||| ||| | || ||||||||||||||| |||| || || | || Sbjct: 561545 cgtcgagtccctcaacctcctccagctcgcccctggtggccacgttggtcgattcatcat 561486 Query: 316 ctggaccgagtctgcc 331 |||||||||||||||| Sbjct: 561485 ctggaccgagtctgcc 561470 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 437 ctcatcaactctgacgaggtccagtctgt 465 |||||||||||||||||| |||||||||| Sbjct: 561332 ctcatcaactctgacgagatccagtctgt 561304
>ref|XM_567364.1| Cryptococcus neoformans var. neoformans JEC21 Ras2 (CNJ01920) partial mRNA Length = 1164 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 256 cgtcgagcgcctcaacctgctcgaccttgcccctggtggccaccttggccggtttgtgat 315 ||||||| ||||||||| ||| | || ||||||||||||||| |||| || || | || Sbjct: 710 cgtcgagtccctcaacctcctccagctcgcccctggtggccacgttggtcgattcatcat 769 Query: 316 ctggaccgagtctgcc 331 |||||||||||||||| Sbjct: 770 ctggaccgagtctgcc 785 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 437 ctcatcaactctgacgaggtccagtctgt 465 |||||||||||||||||| |||||||||| Sbjct: 870 ctcatcaactctgacgagatccagtctgt 898
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 269 aacctgctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtct 328 |||||||| |||| || || ||||||||| ||||||| || ||||||||||| ||||| Sbjct: 425924 aacctgctgcacctggcgcccggtggccacgttggccgcttcgtgatctggacgcagtct 425983 Query: 329 gccttcaagaagctggac 346 || ||| || |||||||| Sbjct: 425984 gcgttcgagcagctggac 426001 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 269 aacctgctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtct 328 |||||||| |||| || || ||||||||| ||||||| || ||||||||||| ||||| Sbjct: 421159 aacctgctgcacctggcgcccggtggccacgttggccgcttcgtgatctggacgcagtct 421218 Query: 329 gccttcaagaagctggac 346 || ||| || |||||||| Sbjct: 421219 gcgttcgagcagctggac 421236 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 293 ggccaccttggccggtttgtgatctggaccgagtctgccttcaagaagctggac 346 |||||| ||||||| || ||||||||||| ||||||| ||| || |||||||| Sbjct: 423566 ggccacgttggccgcttcgtgatctggacgcagtctgcgttcgagcagctggac 423619
>ref|XM_842678.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0748) partial mRNA Length = 1605 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 269 aacctgctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtct 328 |||||||| |||| || || ||||||||| ||||||| || ||||||||||| ||||| Sbjct: 857 aacctgctgcacctggcgcccggtggccacgttggccgcttcgtgatctggacgcagtct 916 Query: 329 gccttcaagaagctggac 346 || ||| || |||||||| Sbjct: 917 gcgttcgagcagctggac 934
>ref|XM_842680.1| Leishmania major strain Friedlin ribosomal protein L1a (LMJ_0750) partial mRNA Length = 1122 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 269 aacctgctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtct 328 |||||||| |||| || || ||||||||| ||||||| || ||||||||||| ||||| Sbjct: 700 aacctgctgcacctggcgcccggtggccacgttggccgcttcgtgatctggacgcagtct 759 Query: 329 gccttcaagaagctggac 346 || ||| || |||||||| Sbjct: 760 gcgttcgagcagctggac 777
>gb|AY091907.1| Uncultured nitrogen-fixing bacterium clone Sp16-1 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 69 tgctcgagcagctgggcgccttcgctgac 97 ||||||||||||||||||||| ||||||| Sbjct: 281 tgctcgagcagctgggcgcctacgctgac 309
>dbj|AU066549.1| Chlamydomonas sp. HS-5 mRNA for 60S ribosomal protein L4, NaCl+paraquat inducible, complete cds, clone:M37 Length = 1278 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 437 ctcatcaactctgacgaggtccagtctgttgtg 469 |||||||||||||||||| ||||||| |||||| Sbjct: 864 ctcatcaactctgacgagatccagtcggttgtg 896 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 128 cgccccggcaagggtaagatgcgcaaccg 156 |||| ||||||||| |||||||||||||| Sbjct: 558 cgccgcggcaagggcaagatgcgcaaccg 586
>ref|NM_120365.2| Arabidopsis thaliana structural constituent of ribosome AT5G02870 mRNA, complete cds Length = 1460 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 330 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 786 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 832
>ref|XM_362607.1| Magnaporthe grisea 70-15 hypothetical protein (MG08190.4) partial mRNA Length = 1116 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 265 cctcaacctgctcgaccttgcccctggtggccaccttgg 303 ||||||||| ||| | || |||||||||||||||||||| Sbjct: 717 cctcaacctcctccagctcgcccctggtggccaccttgg 755
>emb|AL162973.1|ATF9G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F9G14 (ESSA project) Length = 104769 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 330 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 54047 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 54093
>gb|AY136320.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870) mRNA, complete cds Length = 1391 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 330 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 764 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 810
>gb|AY133608.1| Arabidopsis thaliana AT5g02870/F9G14_180 mRNA, complete cds Length = 924 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 330 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 442 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 488
>gb|AY114639.1| Arabidopsis thaliana 60S ribosomal protein-like protein (At5g02870) mRNA, complete cds Length = 1278 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 330 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 742 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 788
>gb|AY093384.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870) mRNA, complete cds Length = 1278 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 330 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 742 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 788
>gb|AF367314.1| Arabidopsis thaliana AT5g02870/F9G14_180 mRNA, complete cds Length = 1417 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 330 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 758 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 804
>gb|AY062452.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870; F9G14_180) mRNA, complete cds Length = 1376 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 330 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 763 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 809
>gb|AY059886.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870; F9G14_180) mRNA, complete cds Length = 1424 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 330 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 786 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 832
>gb|AY054479.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870; F9G14_180) mRNA, complete cds Length = 1436 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 330 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 763 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 809
>dbj|AK117624.1| Arabidopsis thaliana At5g02870 mRNA for putative 60S ribosomal protein, complete cds, clone: RAFL17-28-D01 Length = 2686 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 330 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 783 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 829
>gb|BT002088.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870) mRNA, complete cds Length = 1278 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 284 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 330 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 742 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 788
>gb|AY829692.1| Uncultured bacterium clone TF60007 nitrogenase iron protein (nifH) gene, partial cds Length = 326 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 60 ccatcaaggtgctcgagcagctgggcgcct 89 ||||||| ||||||||||||||||||||| Sbjct: 179 ccatcaatctgctcgagcagctgggcgcct 208
>gb|DQ224562.1| Uncultured bacterium clone nif1004220L64 dinitrogen reductase (nifH) gene, partial cds Length = 327 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 60 ccatcaaggtgctcgagcagctgggcgcct 89 ||||||| ||||||||||||||||||||| Sbjct: 179 ccatcaacatgctcgagcagctgggcgcct 208
>ref|XM_842679.1| Leishmania major strain Friedlin ribosomal protein L1a (LMJ_0749) partial mRNA Length = 1299 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 293 ggccaccttggccggtttgtgatctggaccgagtctgccttcaagaagctggac 346 |||||| ||||||| || ||||||||||| ||||||| ||| || |||||||| Sbjct: 725 ggccacgttggccgcttcgtgatctggacgcagtctgcgttcgagcagctggac 778
>gb|AY829781.1| Lonomia obliqua ribosomal protein 23 mRNA, complete cds Length = 825 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 ccggcaagggtaagatgcgcaaccgc 157 |||| ||||||||||||||||||||| Sbjct: 167 ccggtaagggtaagatgcgcaaccgc 192
>gb|AF518561.1| Unidentified nitrogen-fixing bacteria dinitrogenase reductase (nifH) gene, partial cds Length = 327 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 60 ccatcaaggtgctcgagcagctgggcgcct 89 ||||||| ||||||||||||||||||||| Sbjct: 179 ccatcaatctgctcgagcagctgggcgcct 208
>emb|X80162.1|HSPHP32VD Bacteriophage phi-H hp32 gene Length = 4505 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 cttcgctgacgccgagaaggcc 109 |||||||||||||||||||||| Sbjct: 74 cttcgctgacgccgagaaggcc 95
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gacgccgagaaggccaaggag 115 ||||||||||||||||||||| Sbjct: 2049045 gacgccgagaaggccaaggag 2049025
>gb|AY232334.1| Uncultured bacterium clone GN1061A17 dinitrogenase reductase (nifH) gene, partial cds Length = 327 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 catcaaggtgctcgagcagctgggcgcct 89 ||||||| ||||||||||||| ||||||| Sbjct: 180 catcaagatgctcgagcagctcggcgcct 208
>ref|XM_389185.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09009.1) partial mRNA Length = 588 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 caagaagctggacgaggtgta 354 ||||||||||||||||||||| Sbjct: 72 caagaagctggacgaggtgta 92
>ref|XM_501532.1| Yarrowia lipolytica CLIB122, YALI0C06820g predicted mRNA Length = 1092 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 296 caccttggccggtttgtgatctggaccgagtctgccttcaa 336 ||||||||||| || || |||||||||||| ||||||||| Sbjct: 730 caccttggccgattcgtcatctggaccgagggtgccttcaa 770
>ref|XM_966541.1| PREDICTED: Tribolium castaneum similar to CG5502-PA (LOC660298), mRNA Length = 1369 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 290 ggtggccaccttggccggtttgtgatctggaccgagtctgccttc 334 ||||| ||| ||||||| || || |||||||||||||| |||||| Sbjct: 799 ggtggtcacgttggccgtttcgtcatctggaccgagtcggccttc 843
>gb|DQ098231.1| Uncultured nitrogen-fixing bacterium clone C43 dinitrogenase reductase (nifH) gene, partial cds Length = 361 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 tgctcgagcagctgggcgcct 89 ||||||||||||||||||||| Sbjct: 206 tgctcgagcagctgggcgcct 226
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 aagatcgtcaaggccttccgc 229 ||||||||||||||||||||| Sbjct: 970450 aagatcgtcaaggccttccgc 970470
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 gctcgagcagctgggcgcctt 90 ||||||||||||||||||||| Sbjct: 27635564 gctcgagcagctgggcgcctt 27635584
>gb|AC062020.5| Homo sapiens BAC clone RP11-154O23 from 2, complete sequence Length = 170197 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 tcctttgaggcgtcttcctcc 379 ||||||||||||||||||||| Sbjct: 20700 tcctttgaggcgtcttcctcc 20720
>dbj|AP006055.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0778G11 Length = 59211 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 gctcgagcagctgggcgcctt 90 ||||||||||||||||||||| Sbjct: 39747 gctcgagcagctgggcgcctt 39767
>dbj|AK109610.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G02, full insert sequence Length = 1936 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 gctcgagcagctgggcgcctt 90 ||||||||||||||||||||| Sbjct: 761 gctcgagcagctgggcgcctt 781
>dbj|AK102712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104O20, full insert sequence Length = 1562 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 gctcgagcagctgggcgcctt 90 ||||||||||||||||||||| Sbjct: 600 gctcgagcagctgggcgcctt 580
>dbj|AK060681.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D12, full insert sequence Length = 1645 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 gctcgagcagctgggcgcctt 90 ||||||||||||||||||||| Sbjct: 599 gctcgagcagctgggcgcctt 579
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 296 caccttggccggtttgtgatctggaccgagtctgccttcaa 336 ||||||||||| || || |||||||||||| ||||||||| Sbjct: 910627 caccttggccgattcgtcatctggaccgagggtgccttcaa 910667
>dbj|AP006663.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT48G05, TM0358, complete sequence Length = 111995 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 281 cttgcccctggtggccaccttggccggtttgtgatctggac 321 ||||| |||||||| |||||||| |||| ||||||||||| Sbjct: 42997 cttgcacctggtgggcaccttgggaggttcgtgatctggac 43037
>gb|AC106840.12| Mus musculus chromosome 1, clone RP24-144D4, complete sequence Length = 139608 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gacctcccaggccatcaagg 68 |||||||||||||||||||| Sbjct: 104059 gacctcccaggccatcaagg 104040
>gb|BC070998.1| Xenopus laevis tropomyosin, mRNA (cDNA clone MGC:79995 IMAGE:4032625), complete cds Length = 4864 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 tccaagaagaagggcttcgt 396 |||||||||||||||||||| Sbjct: 2615 tccaagaagaagggcttcgt 2634
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 caagatcgtcaaggccttcc 227 |||||||||||||||||||| Sbjct: 964213 caagatcgtcaaggccttcc 964194
>ref|XM_824372.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.5680) partial mRNA Length = 1443 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 caaccgcaggtacatcaaccgcaa 174 ||||| |||||||||||||||||| Sbjct: 472 caacctcaggtacatcaaccgcaa 495
>gb|AC106705.7| Homo sapiens 3 BAC RP11-262L17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 100464 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 aagcgcagggaggccaggaa 510 |||||||||||||||||||| Sbjct: 52224 aagcgcagggaggccaggaa 52205
>ref|XM_646563.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (153.t00003) partial mRNA Length = 1998 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 371 tcttcctccaagaagaagggcttc 394 |||||||||||||||||| ||||| Sbjct: 1758 tcttcctccaagaagaagtgcttc 1781
>gb|AF240903.1| Cleidogona major RNA polymerase II largest subunit mRNA, partial cds Length = 419 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gacgccgagaaggccaagga 114 |||||||||||||||||||| Sbjct: 123 gacgccgagaaggccaagga 142
>ref|XM_789886.1| PREDICTED: Strongylocentrotus purpuratus similar to apobec-1 complementation factor isoform 1 (LOC590277), mRNA Length = 1221 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 agatgaccaacgctgacctt 430 |||||||||||||||||||| Sbjct: 485 agatgaccaacgctgacctt 466
>gb|AC108527.6| Rattus norvegicus 9 BAC CH230-7F11 (Children's Hospital Oakland Research Institute) complete sequence Length = 225777 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gacctcccaggccatcaagg 68 |||||||||||||||||||| Sbjct: 113217 gacctcccaggccatcaagg 113236
>emb|AL031622.1|HS740A11 Human DNA sequence from clone RP4-740A11 on chromosome Xq22.2-23 Contains part of the COL4A5 gene for type IV alpha 5 collagen (Alport syndrome), complete sequence Length = 104674 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 agtctgttgtgaagcccatc 478 |||||||||||||||||||| Sbjct: 32043 agtctgttgtgaagcccatc 32062
>ref|XM_778380.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal protein L4 (LOC578192), mRNA Length = 1350 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 508 gaagaaccctctgaagaatgctgctgccgtgctcaagctcaaccccta 555 |||||||||||||||||| ||| | | || |||||||||||||||| Sbjct: 997 gaagaaccctctgaagaacgctagggtcatgttcaagctcaaccccta 1044
>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence Length = 1857073 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 agatgcgcaaccgcaggtac 163 |||||||||||||||||||| Sbjct: 319738 agatgcgcaaccgcaggtac 319757
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 acggcaccgagggctccaag 211 |||||||||||||||||||| Sbjct: 907125 acggcaccgagggctccaag 907106
>gb|AC136742.15| Mus musculus chromosome 5, clone RP23-145H8, complete sequence Length = 197131 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 agaagacctcccaggccatc 64 |||||||||||||||||||| Sbjct: 107460 agaagacctcccaggccatc 107479
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 gctcgagcagctgggcgccttcgc 93 |||||||||||||| ||||||||| Sbjct: 2324573 gctcgagcagctggtcgccttcgc 2324550
>gb|AE004887.1| Pseudomonas aeruginosa PAO1, section 448 of 529 of the complete genome Length = 10139 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 276 tcgaccttgcccctggtggccaccttggccgg 307 |||||||||||| || || ||||||||||||| Sbjct: 7683 tcgaccttgcccttgatgtccaccttggccgg 7652
>gb|AF236858.1|AF236858 Xenopus laevis alphafast-tropomyosin gene, partial cds, alternatively spliced Length = 2790 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 tccaagaagaagggcttcgt 396 |||||||||||||||||||| Sbjct: 1860 tccaagaagaagggcttcgt 1879
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 catcgagaagacctcccagg 59 |||||||||||||||||||| Sbjct: 4833844 catcgagaagacctcccagg 4833863
>dbj|AB175022.1| Burkholderia cepacia cheS, limS genes for cholesterol esterase, lipase chaperone, complete cds Length = 3048 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 255 acgtcgagcgcctcaacctgctcgaccttgcc 286 |||||||||||||| |||||| ||||| |||| Sbjct: 2156 acgtcgagcgcctcgacctgcgcgaccgtgcc 2125
>ref|XM_311909.2| Anopheles gambiae str. PEST ENSANGP00000010912 (ENSANGG00000008423), partial mRNA Length = 7578 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 gccttcaagaagctggacga 348 |||||||||||||||||||| Sbjct: 2089 gccttcaagaagctggacga 2108
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 agatgcgcaaccgcaggtac 163 |||||||||||||||||||| Sbjct: 1594303 agatgcgcaaccgcaggtac 1594322
>gb|BT001354.1| Drosophila melanogaster AT27295 full insert cDNA Length = 2102 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 tggccaccttggccggtttg 311 |||||||||||||||||||| Sbjct: 1220 tggccaccttggccggtttg 1239
>gb|U68183.1|DGU68183 Desulfovibrio gigas Fe protein of nitrogenase (nifH) gene, complete cds, and unknown protein gene, partial sequence Length = 1450 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 60 ccatcaaggtgctcgagcagctgggcgccttc 91 ||||||| |||| |||||||||||||||||| Sbjct: 547 ccatcaacctgctggagcagctgggcgccttc 578 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,266,829 Number of Sequences: 3902068 Number of extensions: 4266829 Number of successful extensions: 90222 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 89442 Number of HSP's gapped (non-prelim): 765 length of query: 593 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 570 effective length of database: 17,143,297,704 effective search space: 9771679691280 effective search space used: 9771679691280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
