| Clone Name | bags21n07 |
|---|---|
| Clone Library Name | barley_pub |
>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)| Length = 980 Score = 31.6 bits (70), Expect = 1.5 Identities = 19/36 (52%), Positives = 23/36 (63%) Frame = +3 Query: 15 TLNLNGNDLSGRVPASLGGRPLHRVRFNFTDNARLC 122 TL+L+ NDLSGRVP LGG+ L +F N LC Sbjct: 580 TLDLSFNDLSGRVP--LGGQFLVFNETSFAGNTYLC 613
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 31.2 bits (69), Expect = 1.9 Identities = 15/22 (68%), Positives = 17/22 (77%) Frame = +3 Query: 3 RHEETLNLNGNDLSGRVPASLG 68 R E+LNL GN LSG +PASLG Sbjct: 163 RKLESLNLAGNFLSGTIPASLG 184
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 940 Score = 29.3 bits (64), Expect = 7.3 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = +3 Query: 339 GKHHRPHESPRGGNNESSPH 398 G HRPHE P GG SS H Sbjct: 749 GGGHRPHEGPGGGMGNSSGH 768
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 29.3 bits (64), Expect = 7.3 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = +3 Query: 339 GKHHRPHESPRGGNNESSPH 398 G HRPHE P GG SS H Sbjct: 748 GGGHRPHEGPGGGMGNSSGH 767
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 28.9 bits (63), Expect = 9.5 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = +3 Query: 336 MGKHHRPHESPRGGNNESSPH 398 MG HRPHE P GG S H Sbjct: 794 MGGGHRPHEGPGGGMGGGSGH 814 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,923,614 Number of Sequences: 219361 Number of extensions: 1732750 Number of successful extensions: 4006 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3869 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4004 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)