| Clone Name | bags22b24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017257.1| Zea mays clone EL01N0308D08.c mRNA sequence Length = 718 Score = 367 bits (185), Expect = 3e-98 Identities = 390/453 (86%), Gaps = 4/453 (0%) Strand = Plus / Plus Query: 40 cggtcaaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgaca 99 |||| ||||| ||||| ||||||||||| || |||||||||||||| |||||||| | Sbjct: 43 cggtgaacccgaaggcgtacccgctggctgatgcgcagctgacgatgggtatcctcgata 102 Query: 100 tcgtccagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaaga 159 || |||||||||||||||||||||||||||||||||||||||| ||||||||||| || | Sbjct: 103 tcatccagcaggccgccaactacaagcagctcaagaagggagcgaacgaagcgacgaaaa 162 Query: 160 ctctcaacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaa 219 | || || ||||| |||||||||||||| |||||||| || ||||||||||| ||||| | Sbjct: 163 ccctgaatagggggatatcggagttcgttgtgatggcggcggacacggagcctctcgaga 222 Query: 220 tcctcctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtccctt 279 |||| ||||||||||| ||| | || ||||| ||||| || || ||||| ||||| || | Sbjct: 223 tcctgctccacctccccttgttagccgaggataagaacgtcccatatgtatttgttccat 282 Query: 280 caaagcaagcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtga 339 | || ||||| ||||| ||||||||||| ||||| || || ||||||||||| ||||||| Sbjct: 283 cgaaacaagctcttggccgtgcttgtggtgtgacaagacccgtcattgcttgctcagtga 342 Query: 340 ccagcaatgagggtagccaactgaagcagccgatccagagtctcaaggatgccatcgaga 399 ||||||||||||||||||| ||||| || | ||| ||| |||||||||| | || |||| Sbjct: 343 ccagcaatgagggtagccagctgaaacaacagatacagggtctcaaggactcgattgaga 402 Query: 400 agcttctcatatgatttatc-aagacctttcagtgtgatgggccttcgtgtgacacagtt 458 |||||||||| ||||||| | |||| |||||||||||||||||| ||| | |||||| || Sbjct: 403 agcttctcatctgatttacctaagatctttcagtgtgatgggcc-tcg-gcgacaca-tt 459 Query: 459 tttcaggggcttggactggtgatggtgtcttgt 491 |||||| |||||||||||||||||||||||||| Sbjct: 460 tttcagaggcttggactggtgatggtgtcttgt 492
>gb|BT018105.1| Zea mays clone EL01N0553D01.c mRNA sequence Length = 791 Score = 319 bits (161), Expect = 6e-84 Identities = 379/448 (84%), Gaps = 4/448 (0%) Strand = Plus / Plus Query: 45 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 104 ||||| ||||| ||||||||||| || |||||||||||||| |||||||| ||| || Sbjct: 167 aacccgaaggcatacccgctggctgatgcgcagctgacgatgggtatcctcgatatcatc 226 Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 164 |||||||||||||||||||| ||||| ||||||||||| || |||||||| ||||| || Sbjct: 227 cagcaggccgccaactacaaacagcttaagaagggagcgaatgaagcgacgaagaccctg 286 Query: 165 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctc 224 || ||||| ||||||||||| || |||||||| || ||||| ||||| ||||| ||||| Sbjct: 287 aataggggcatatcggagtttgtagtgatggcggcggacacagagcctctcgagatcctg 346 Query: 225 ctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaag 284 ||||||||||| ||| | || ||||| ||||| ||||| ||||| ||||| || || ||| Sbjct: 347 ctccacctccccttgttagctgaggataagaacgtgccatatgtgtttgttccatcgaag 406 Query: 285 caagcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtgaccagc 344 ||||| ||||| ||||||||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 407 caagctcttggccgtgcttgtggtgtgacaagaccggttattgcttgctcagtgaccagt 466 Query: 345 aatgagggtagccaactgaagcagccgatccagagtctcaaggatgccatcgagaagctt 404 |||||||||||||| ||||| | | ||| ||| |||||||||| |||| ||||||||| Sbjct: 467 aatgagggtagccagctgaaactacagatacagggtctcaaggactccattgagaagctt 526 Query: 405 ctcatatgatttatc-aagacctttcagtgtgatgggccttcgtgtgacacagtttttca 463 ||||| |||| | | |||||||||||||||||||||||| | ||||| ||||||| Sbjct: 527 ctcatctgatctgccgaagacctttcagtgtgatgggcct--cagcgacac-ttttttca 583 Query: 464 ggggcttggactggtgatggtgtcttgt 491 | |||||||||||||||||||||||||| Sbjct: 584 gaggcttggactggtgatggtgtcttgt 611
>gb|AY103642.1| Zea mays PCO105720 mRNA sequence Length = 1169 Score = 317 bits (160), Expect = 2e-83 Identities = 380/448 (84%), Gaps = 4/448 (0%) Strand = Plus / Plus Query: 45 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 104 ||||| ||||| ||||||||||| || |||||||||||||| |||||||| ||| || Sbjct: 157 aacccgaaggcatacccgctggctgatgcgcagctgacgatgggtatcctcgatatcatc 216 Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 164 |||||||||||||||||||| ||||| ||||||||||| || |||||||| ||||| || Sbjct: 217 cagcaggccgccaactacaaacagcttaagaagggagcgaatgaagcgacgaagaccctg 276 Query: 165 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctc 224 || ||||| ||||||||||| || |||||||| || ||||| ||||| ||||| ||||| Sbjct: 277 aataggggcatatcggagtttgtagtgatggcggcggacacagagcctctcgagatcctg 336 Query: 225 ctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaag 284 ||||||||||| ||| | || ||||| ||||| ||||| ||||| ||||| || || ||| Sbjct: 337 ctccacctccccttgttagctgaggataagaacgtgccatatgtgtttgttccatcgaag 396 Query: 285 caagcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtgaccagc 344 ||||| ||||| ||||||||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 397 caagctcttggccgtgcttgtggtgtgacaagaccggttattgcttgctcagtgaccagt 456 Query: 345 aatgagggtagccaactgaagcagccgatccagagtctcaaggatgccatcgagaagctt 404 |||||||||||||| ||||| | | ||| ||| |||||||||| |||| ||||||||| Sbjct: 457 aatgagggtagccagctgaaactacagatacagggtctcaaggactccattgagaagctt 516 Query: 405 ctcatatgatttatc-aagacctttcagtgtgatgggccttcgtgtgacacagtttttca 463 ||||| |||| | | ||||||||||||||||||||||| || | ||||| ||||||| Sbjct: 517 ctcatctgatctgccgaagacctttcagtgtgatgggcc-tcat-cgacac-ttttttca 573 Query: 464 ggggcttggactggtgatggtgtcttgt 491 | |||||||||||||||||||||||||| Sbjct: 574 gaggcttggactggtgatggtgtcttgt 601
>ref|NM_194676.1| Oryza sativa (japonica cultivar-group) putative ribosomal protein L7Ae-like (OSJNBa0056A20.5), mRNA Length = 381 Score = 214 bits (108), Expect = 3e-52 Identities = 210/244 (86%) Strand = Plus / Plus Query: 108 caggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaac 167 |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 76 caggccgccaactacaagcagctcaagaagggcgccaacgaagcgacgaagacgctcaac 135 Query: 168 aggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctc 227 || || || ||||||||||||||||||| || ||| | ||||| ||||| ||||| ||| Sbjct: 136 agagggatcgcggagttcgtggtgatggcggccgacgccgagcccctcgagatccttctc 195 Query: 228 cacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaa 287 ||||| || | ||||| ||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 196 caccttcccctcctcgccgaggacaagaatgtgccatacgtctttgtcccatcaaagcaa 255 Query: 288 gcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtgaccagcaat 347 || || || ||||| ||||| ||||| ||||| || || || || || |||||||||||| Sbjct: 256 gctctcggccgtgcatgtggggtgacgaggcccgtgatcgcctgctcggtgaccagcaat 315 Query: 348 gagg 351 |||| Sbjct: 316 gagg 319
>dbj|AK121991.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109K13, full insert sequence Length = 675 Score = 214 bits (108), Expect = 3e-52 Identities = 210/244 (86%) Strand = Plus / Plus Query: 108 caggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaac 167 |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 147 caggccgccaactacaagcagctcaagaagggcgccaacgaagcgacgaagacgctcaac 206 Query: 168 aggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctc 227 || || || ||||||||||||||||||| || ||| | ||||| ||||| ||||| ||| Sbjct: 207 agagggatcgcggagttcgtggtgatggcggccgacgccgagcccctcgagatccttctc 266 Query: 228 cacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaa 287 ||||| || | ||||| ||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 267 caccttcccctcctcgccgaggacaagaatgtgccatacgtctttgtcccatcaaagcaa 326 Query: 288 gcccttgggcgtgcttgtggagtgactaggccggtcattgcttgttcagtgaccagcaat 347 || || || ||||| ||||| ||||| ||||| || || || || || |||||||||||| Sbjct: 327 gctctcggccgtgcatgtggggtgacgaggcccgtgatcgcctgctcggtgaccagcaat 386 Query: 348 gagg 351 |||| Sbjct: 387 gagg 390
>gb|AY389676.1| Hyacinthus orientalis ribosomal protein L7 (RPL7) mRNA, complete cds Length = 675 Score = 155 bits (78), Expect = 2e-34 Identities = 165/194 (85%) Strand = Plus / Plus Query: 102 gtccagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagact 161 ||||||||||| ||||| |||||||||||||| ||||| || || |||||||| |||||| Sbjct: 110 gtccagcaggcggccaattacaagcagctcaaaaagggtgctaatgaagcgactaagact 169 Query: 162 ctcaacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatc 221 || ||||||||||| |||||||| || |||||||| || ||| | ||||| |||||||| Sbjct: 170 ctgaacaggggaatctcggagtttgttgtgatggctgcggacgctgagcccctcgaaatt 229 Query: 222 ctcctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttca 281 || || ||||| || |||| || ||||||||||||||||| ||||||||||| ||||| Sbjct: 230 cttcttcaccttcctctgcttgctgaggacaagaatgtgccctatgtctttgttccttcc 289 Query: 282 aagcaagcccttgg 295 || ||||| ||||| Sbjct: 290 aaacaagcacttgg 303
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 155 bits (78), Expect = 2e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 45 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 104 ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 7446137 aaccctaaggcctacccgctggcggacgcgcagctgacgatgaccatcctcgacctcgtc 7446196 Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaag 150 ||||||||| |||| |||||||||||||||||||| |||||||||| Sbjct: 7446197 cagcaggcctccaattacaagcagctcaagaagggggccaacgaag 7446242 Score = 139 bits (70), Expect = 1e-29 Identities = 103/114 (90%) Strand = Plus / Plus Query: 385 aggatgccatcgagaagcttctcatatgatttatcaagacctttcagtgtgatgggcctt 444 ||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||||||| Sbjct: 7447448 aggatgctatcgagaagctcctcatttgatttaccaagacctttcagtgtgatgggcctc 7447507 Query: 445 cgtgtgacacagtttttcaggggcttggactggtgatggtgtcttgtctgctag 498 | | ||||||||||||||| |||||||||||||||||||||||| | |||||| Sbjct: 7447508 agagcgacacagtttttcagaggcttggactggtgatggtgtcttatttgctag 7447561 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 149 agcgaccaagactctcaacaggggaatatcggagttcgtggtgatggcagctgacacgga 208 |||||| ||||| || |||||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 7446331 agcgacgaagaccctgaacaggggtatatcagagttcgtggtgatggcggccgacacgga 7446390 Query: 209 gccgctcgaaatcctcctccacctcccgttgctcgcggagga 250 ||||||||| ||||| ||||||||||| ||||||||||||| Sbjct: 7446391 gccgctcgagatccttctccacctccccctgctcgcggagga 7446432 Score = 103 bits (52), Expect = 7e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 264 tatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtgactaggccggtc 323 ||||| ||||||||||| |||||||||||||| || || ||||| || ||||| || ||| Sbjct: 7447230 tatgtttttgtcccttcgaagcaagcccttggccgcgcatgtggcgttactagacctgtc 7447289 Query: 324 attgcttgttcagtgaccagcaatgagggtagccaactgaagcagccgatccagagtctc 383 ||||||||||||||||||||||| ||||| || || |||||| ||||| |||| |||| Sbjct: 7447290 attgcttgttcagtgaccagcaacgagggcagtcagctgaagacaccgatacagaatctc 7447349 Query: 384 aagg 387 |||| Sbjct: 7447350 aagg 7447353
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 155 bits (78), Expect = 2e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 45 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 104 ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 84692 aaccctaaggcctacccgctggcggacgcgcagctgacgatgaccatcctcgacctcgtc 84751 Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaag 150 ||||||||| |||| |||||||||||||||||||| |||||||||| Sbjct: 84752 cagcaggcctccaattacaagcagctcaagaagggggccaacgaag 84797 Score = 139 bits (70), Expect = 1e-29 Identities = 103/114 (90%) Strand = Plus / Plus Query: 385 aggatgccatcgagaagcttctcatatgatttatcaagacctttcagtgtgatgggcctt 444 ||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||||||| Sbjct: 86003 aggatgctatcgagaagctcctcatttgatttaccaagacctttcagtgtgatgggcctc 86062 Query: 445 cgtgtgacacagtttttcaggggcttggactggtgatggtgtcttgtctgctag 498 | | ||||||||||||||| |||||||||||||||||||||||| | |||||| Sbjct: 86063 agagcgacacagtttttcagaggcttggactggtgatggtgtcttatttgctag 86116 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 149 agcgaccaagactctcaacaggggaatatcggagttcgtggtgatggcagctgacacgga 208 |||||| ||||| || |||||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 84886 agcgacgaagaccctgaacaggggtatatcagagttcgtggtgatggcggccgacacgga 84945 Query: 209 gccgctcgaaatcctcctccacctcccgttgctcgcggagga 250 ||||||||| ||||| ||||||||||| ||||||||||||| Sbjct: 84946 gccgctcgagatccttctccacctccccctgctcgcggagga 84987 Score = 103 bits (52), Expect = 7e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 264 tatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtgactaggccggtc 323 ||||| ||||||||||| |||||||||||||| || || ||||| || ||||| || ||| Sbjct: 85785 tatgtttttgtcccttcgaagcaagcccttggccgcgcatgtggcgttactagacctgtc 85844 Query: 324 attgcttgttcagtgaccagcaatgagggtagccaactgaagcagccgatccagagtctc 383 ||||||||||||||||||||||| ||||| || || |||||| ||||| |||| |||| Sbjct: 85845 attgcttgttcagtgaccagcaacgagggcagtcagctgaagacaccgatacagaatctc 85904 Query: 384 aagg 387 |||| Sbjct: 85905 aagg 85908
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 155 bits (78), Expect = 2e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 45 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 104 ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 7443972 aaccctaaggcctacccgctggcggacgcgcagctgacgatgaccatcctcgacctcgtc 7444031 Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaag 150 ||||||||| |||| |||||||||||||||||||| |||||||||| Sbjct: 7444032 cagcaggcctccaattacaagcagctcaagaagggggccaacgaag 7444077 Score = 139 bits (70), Expect = 1e-29 Identities = 103/114 (90%) Strand = Plus / Plus Query: 385 aggatgccatcgagaagcttctcatatgatttatcaagacctttcagtgtgatgggcctt 444 ||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||||||| Sbjct: 7445283 aggatgctatcgagaagctcctcatttgatttaccaagacctttcagtgtgatgggcctc 7445342 Query: 445 cgtgtgacacagtttttcaggggcttggactggtgatggtgtcttgtctgctag 498 | | ||||||||||||||| |||||||||||||||||||||||| | |||||| Sbjct: 7445343 agagcgacacagtttttcagaggcttggactggtgatggtgtcttatttgctag 7445396 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 149 agcgaccaagactctcaacaggggaatatcggagttcgtggtgatggcagctgacacgga 208 |||||| ||||| || |||||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 7444166 agcgacgaagaccctgaacaggggtatatcagagttcgtggtgatggcggccgacacgga 7444225 Query: 209 gccgctcgaaatcctcctccacctcccgttgctcgcggagga 250 ||||||||| ||||| ||||||||||| ||||||||||||| Sbjct: 7444226 gccgctcgagatccttctccacctccccctgctcgcggagga 7444267 Score = 103 bits (52), Expect = 7e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 264 tatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtgactaggccggtc 323 ||||| ||||||||||| |||||||||||||| || || ||||| || ||||| || ||| Sbjct: 7445065 tatgtttttgtcccttcgaagcaagcccttggccgcgcatgtggcgttactagacctgtc 7445124 Query: 324 attgcttgttcagtgaccagcaatgagggtagccaactgaagcagccgatccagagtctc 383 ||||||||||||||||||||||| ||||| || || |||||| ||||| |||| |||| Sbjct: 7445125 attgcttgttcagtgaccagcaacgagggcagtcagctgaagacaccgatacagaatctc 7445184 Query: 384 aagg 387 |||| Sbjct: 7445185 aagg 7445188
>gb|DQ459071.1| Sorghum bicolor cultivar BTx623 clone BAC c0156b06, complete sequence Length = 112592 Score = 125 bits (63), Expect = 2e-25 Identities = 117/135 (86%) Strand = Plus / Minus Query: 253 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 312 |||| ||||| ||||| ||||| || ||||| ||||| ||||| || |||||||| |||| Sbjct: 112090 agaacgtgccatatgtatttgttccatcaaaacaagctcttggccgagcttgtggggtga 112031 Query: 313 ctaggccggtcattgcttgttcagtgaccagcaatgagggtagccaactgaagcagccga 372 | ||||||||||||||||| |||||||||||||||||||||||||| ||||| || | || Sbjct: 112030 caaggccggtcattgcttgctcagtgaccagcaatgagggtagccagctgaaacaacaga 111971 Query: 373 tccagagtctcaagg 387 | ||| ||||||||| Sbjct: 111970 tacagggtctcaagg 111956 Score = 83.8 bits (42), Expect = 6e-13 Identities = 86/97 (88%), Gaps = 4/97 (4%) Strand = Plus / Minus Query: 396 gagaagcttctcatatgatttatc-aagacctttcagtgtgatgggccttcgtgtgacac 454 |||||||||||||| ||||||| | |||||||||||||||||||||||| | ||||| Sbjct: 111786 gagaagcttctcatctgatttaccgaagacctttcagtgtgatgggcct--cagggacac 111729 Query: 455 agtttttcaggggcttggactggtgatggtgtcttgt 491 | ||||||| |||||||||||||||||||||||||| Sbjct: 111728 a-attttcagaggcttggactggtgatggtgtcttgt 111693
>emb|Z49911.1|CEM28 Caenorhabditis elegans Cosmid M28, complete sequence Length = 40265 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaat 175 |||||||| ||||||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 38985 aactacaaacagctcaagaagggagccaacgaggccaccaagactctcaacagaggaat 38927
>ref|NM_063899.3| Caenorhabditis elegans M28.5 (M28.5) mRNA, complete cds Length = 531 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaat 175 |||||||| ||||||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 103 aactacaaacagctcaagaagggagccaacgaggccaccaagactctcaacagaggaat 161
>gb|AC079128.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0056A20, complete sequence Length = 151163 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 253 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 312 |||||||||| || ||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 29264 agaatgtgccatacgtctttgtcccatcaaagcaagctctcggccgtgcatgtggggtga 29323 Query: 313 ctaggccggtcattgcttgttcagtgaccagcaatgagg 351 | ||||| || || || || || |||||||||||||||| Sbjct: 29324 cgaggcccgtgatcgcctgctcggtgaccagcaatgagg 29362 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 108 caggccgccaactacaagcagctcaagaagggagccaacgaag 150 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 28290 caggccgccaactacaagcagctcaagaagggcgccaacgaag 28332 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 149 agcgaccaagactctcaacaggggaatatcggagttcgtggtgatggcagctgacacgga 208 |||||| ||||| |||||||| || || ||||||||||||||||||| || ||| | || Sbjct: 28418 agcgacgaagacgctcaacagagggatcgcggagttcgtggtgatggcggccgacgccga 28477 Query: 209 gccgctcgaaatcctcctccacctcccgttgctcgcggaggacaag 254 ||| ||||| ||||| |||||||| || | ||||| ||||||||| Sbjct: 28478 gcccctcgagatccttctccaccttcccctcctcgccgaggacaag 28523
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 253 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 312 |||||||||| || ||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 1510691 agaatgtgccatacgtctttgtcccatcaaagcaagctctcggccgtgcatgtggggtga 1510750 Query: 313 ctaggccggtcattgcttgttcagtgaccagcaatgagg 351 | ||||| || || || || || |||||||||||||||| Sbjct: 1510751 cgaggcccgtgatcgcctgctcggtgaccagcaatgagg 1510789 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 108 caggccgccaactacaagcagctcaagaagggagccaacgaag 150 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1509717 caggccgccaactacaagcagctcaagaagggcgccaacgaag 1509759 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 149 agcgaccaagactctcaacaggggaatatcggagttcgtggtgatggcagctgacacgga 208 |||||| ||||| |||||||| || || ||||||||||||||||||| || ||| | || Sbjct: 1509845 agcgacgaagacgctcaacagagggatcgcggagttcgtggtgatggcggccgacgccga 1509904 Query: 209 gccgctcgaaatcctcctccacctcccgttgctcgcggaggacaag 254 ||| ||||| ||||| |||||||| || | ||||| ||||||||| Sbjct: 1509905 gcccctcgagatccttctccaccttcccctcctcgccgaggacaag 1509950
>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0049K09, complete sequence Length = 154181 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 253 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 312 |||||||||| || ||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 123445 agaatgtgccatacgtctttgtcccatcaaagcaagctctcggccgtgcatgtggggtga 123504 Query: 313 ctaggccggtcattgcttgttcagtgaccagcaatgagg 351 | ||||| || || || || || |||||||||||||||| Sbjct: 123505 cgaggcccgtgatcgcctgctcggtgaccagcaatgagg 123543 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 108 caggccgccaactacaagcagctcaagaagggagccaacgaag 150 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 122471 caggccgccaactacaagcagctcaagaagggcgccaacgaag 122513 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 149 agcgaccaagactctcaacaggggaatatcggagttcgtggtgatggcagctgacacgga 208 |||||| ||||| |||||||| || || ||||||||||||||||||| || ||| | || Sbjct: 122599 agcgacgaagacgctcaacagagggatcgcggagttcgtggtgatggcggccgacgccga 122658 Query: 209 gccgctcgaaatcctcctccacctcccgttgctcgcggaggacaag 254 ||| ||||| ||||| |||||||| || | ||||| ||||||||| Sbjct: 122659 gcccctcgagatccttctccaccttcccctcctcgccgaggacaag 122704
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 253 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 312 |||||||||| || ||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 1510691 agaatgtgccatacgtctttgtcccatcaaagcaagctctcggccgtgcatgtggggtga 1510750 Query: 313 ctaggccggtcattgcttgttcagtgaccagcaatgagg 351 | ||||| || || || || || |||||||||||||||| Sbjct: 1510751 cgaggcccgtgatcgcctgctcggtgaccagcaatgagg 1510789 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 108 caggccgccaactacaagcagctcaagaagggagccaacgaag 150 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1509717 caggccgccaactacaagcagctcaagaagggcgccaacgaag 1509759 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 149 agcgaccaagactctcaacaggggaatatcggagttcgtggtgatggcagctgacacgga 208 |||||| ||||| |||||||| || || ||||||||||||||||||| || ||| | || Sbjct: 1509845 agcgacgaagacgctcaacagagggatcgcggagttcgtggtgatggcggccgacgccga 1509904 Query: 209 gccgctcgaaatcctcctccacctcccgttgctcgcggaggacaag 254 ||| ||||| ||||| |||||||| || | ||||| ||||||||| Sbjct: 1509905 gcccctcgagatccttctccaccttcccctcctcgccgaggacaag 1509950
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 253 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 312 |||||||||| || ||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 1510688 agaatgtgccatacgtctttgtcccatcaaagcaagctctcggccgtgcatgtggggtga 1510747 Query: 313 ctaggccggtcattgcttgttcagtgaccagcaatgagg 351 | ||||| || || || || || |||||||||||||||| Sbjct: 1510748 cgaggcccgtgatcgcctgctcggtgaccagcaatgagg 1510786 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 108 caggccgccaactacaagcagctcaagaagggagccaacgaag 150 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1509714 caggccgccaactacaagcagctcaagaagggcgccaacgaag 1509756 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 149 agcgaccaagactctcaacaggggaatatcggagttcgtggtgatggcagctgacacgga 208 |||||| ||||| |||||||| || || ||||||||||||||||||| || ||| | || Sbjct: 1509842 agcgacgaagacgctcaacagagggatcgcggagttcgtggtgatggcggccgacgccga 1509901 Query: 209 gccgctcgaaatcctcctccacctcccgttgctcgcggaggacaag 254 ||| ||||| ||||| |||||||| || | ||||| ||||||||| Sbjct: 1509902 gcccctcgagatccttctccaccttcccctcctcgccgaggacaag 1509947
>ref|XM_531713.2| PREDICTED: Canis familiaris similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1) (LOC474484), mRNA Length = 1414 Score = 67.9 bits (34), Expect = 4e-08 Identities = 172/218 (78%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||||||||| ||||| || |||||||| || || Sbjct: 156 aactacaagcagcttcggaaaggagccaacgaagccaccaaaaccctcaacagaggcatc 215 Query: 177 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 236 || |||||| | |||||||| || ||| | ||||| || |||||| |||| ||||| ||| Sbjct: 216 tctgagttcatcgtgatggctgcagacgctgagcctctggaaatcatcctgcaccttccg 275 Query: 237 ttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttggg 296 |||| || || ||||| ||||| || || ||||| | || ||||| ||||| ||| Sbjct: 276 ctgctgtgtgaagataagaacgtgccctacgtgtttgtgcgctccaagcaggccctcggg 335 Query: 297 cgtgcttgtggagtgactaggccggtcattgcttgttc 334 || || ||||| ||| | ||||| |||||||| ||||| Sbjct: 336 cgggcctgtggggtgtccaggcctgtcattgcctgttc 373
>ref|XM_571849.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 596 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 120 tacaagcagctcaagaagggagccaacgaagcgaccaagac 160 |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 196 tacaagcagctcaagaagggtgccaacgaagccaccaagac 236
>ref|NM_122023.2| Arabidopsis thaliana RNA binding / structural constituent of ribosome AT5G20160 transcript variant AT5G20160.1 mRNA, complete cds Length = 719 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 246 gaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgt 305 ||||| |||||||| || ||||||||||| ||||||||||||||| | || | || ||| Sbjct: 313 gaggataagaatgttccttatgtctttgtgccttcaaagcaagccttgggaagagcctgt 372 Query: 306 ggagtgactaggccggtcattgcttgttcagt 337 || |||||||| || || || ||||||||||| Sbjct: 373 ggtgtgactagacctgttatcgcttgttcagt 404 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactct 163 ||||||||||||||||||||||| || || ||||| || |||||||| Sbjct: 184 aactacaagcagctcaagaagggtgctaatgaagctacgaagactct 230
>ref|NM_180525.1| Arabidopsis thaliana RNA binding / structural constituent of ribosome AT5G20160 transcript variant AT5G20160.2 mRNA, complete cds Length = 815 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 246 gaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgt 305 ||||| |||||||| || ||||||||||| ||||||||||||||| | || | || ||| Sbjct: 409 gaggataagaatgttccttatgtctttgtgccttcaaagcaagccttgggaagagcctgt 468 Query: 306 ggagtgactaggccggtcattgcttgttcagt 337 || |||||||| || || || ||||||||||| Sbjct: 469 ggtgtgactagacctgttatcgcttgttcagt 500 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaaggg 139 ||||||||||||||||||||||| Sbjct: 184 aactacaagcagctcaagaaggg 206
>gb|AY094018.1| Arabidopsis thaliana AT5g20160/F5O24_50 mRNA, complete cds Length = 387 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 246 gaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgt 305 ||||| |||||||| || ||||||||||| ||||||||||||||| | || | || ||| Sbjct: 220 gaggataagaatgttccttatgtctttgtgccttcaaagcaagccttgggaagagcctgt 279 Query: 306 ggagtgactaggccggtcattgcttgttcagt 337 || |||||||| || || || ||||||||||| Sbjct: 280 ggtgtgactagacctgttatcgcttgttcagt 311 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactct 163 ||||||||||||||||||||||| || || ||||| || |||||||| Sbjct: 91 aactacaagcagctcaagaagggtgctaatgaagctacgaagactct 137
>gb|AY048213.1| Arabidopsis thaliana AT5g20160/F5O24_50 mRNA, complete cds Length = 716 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 246 gaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgt 305 ||||| |||||||| || ||||||||||| ||||||||||||||| | || | || ||| Sbjct: 313 gaggataagaatgttccttatgtctttgtgccttcaaagcaagccttgggaagagcctgt 372 Query: 306 ggagtgactaggccggtcattgcttgttcagt 337 || |||||||| || || || ||||||||||| Sbjct: 373 ggtgtgactagacctgttatcgcttgttcagt 404 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactct 163 ||||||||||||||||||||||| || || ||||| || |||||||| Sbjct: 184 aactacaagcagctcaagaagggtgctaatgaagctacgaagactct 230
>gb|AY086996.1| Arabidopsis thaliana clone 30288 mRNA, complete sequence Length = 726 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 246 gaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgt 305 ||||| |||||||| || ||||||||||| ||||||||||||||| | || | || ||| Sbjct: 313 gaggataagaatgttccttatgtctttgtgccttcaaagcaagccttgggaagagcctgt 372 Query: 306 ggagtgactaggccggtcattgcttgttcagt 337 || |||||||| || || || ||||||||||| Sbjct: 373 ggtgtgactagacctgttatcgcttgttcagt 404 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactct 163 ||||||||||||||||||||||| || || ||||| || |||||||| Sbjct: 184 aactacaagcagctcaagaagggtgctaatgaagctacgaagactct 230
>ref|XM_757414.1| Ustilago maydis 521 hypothetical protein (UM06360.1) partial mRNA Length = 381 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 89 gatcctcgacatcgtccagcaggccgccaactacaagcagctcaagaagggagccaacga 148 |||||||||| || | |||||||| | |||||||||||||||||||||| || ||||| Sbjct: 57 gatcctcgacctcattcagcaggcttcgcactacaagcagctcaagaagggtgctaacga 116 Query: 149 agcgaccaagactctcaac 167 || |||||||| |||||| Sbjct: 117 ggccaccaagacgctcaac 135 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 246 gaggacaagaatgtgccgtatgtctttgtcccttc 280 ||||||||||| ||||| || |||||||||||||| Sbjct: 214 gaggacaagaacgtgccttacgtctttgtcccttc 248
>ref|NM_200312.1| Danio rerio zgc:56066 (zgc:56066), mRNA Length = 1751 Score = 60.0 bits (30), Expect = 9e-06 Identities = 135/170 (79%) Strand = Plus / Plus Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 164 |||||||| ||||| ||||| ||||| | ||| || ||||||||||| || || || || Sbjct: 233 cagcaggcagccaattacaaacagctgaggaaaggggccaacgaagccactaaaaccctg 292 Query: 165 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctc 224 ||| ||||||| || |||||| | |||||||| || ||| | |||||||| || ||| || Sbjct: 293 aaccggggaatctcagagttcatcgtgatggcggccgacgcagagccgctggagatcatc 352 Query: 225 ctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgt 274 || || || ||| |||| ||||||||||| || |||||||| ||||| Sbjct: 353 ctgcatctgccgctgctgtgcgaggacaagaacgtcccgtatgtgtttgt 402
>ref|XM_505832.1| Yarrowia lipolytica CLIB122, YALI0F24497g predicted mRNA Length = 381 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 126 cagctcaagaagggagccaacgaagcgaccaagactctcaac 167 ||||||||||||||||||||||| || |||||||| |||||| Sbjct: 94 cagctcaagaagggagccaacgaggccaccaagaccctcaac 135
>gb|BC050495.1| Danio rerio zgc:56066, mRNA (cDNA clone MGC:56066 IMAGE:3820656), complete cds Length = 1751 Score = 60.0 bits (30), Expect = 9e-06 Identities = 135/170 (79%) Strand = Plus / Plus Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 164 |||||||| ||||| ||||| ||||| | ||| || ||||||||||| || || || || Sbjct: 233 cagcaggcagccaattacaaacagctgaggaaaggggccaacgaagccactaaaaccctg 292 Query: 165 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctc 224 ||| ||||||| || |||||| | |||||||| || ||| | |||||||| || ||| || Sbjct: 293 aaccggggaatctcagagttcatcgtgatggcggccgacgcagagccgctggagatcatc 352 Query: 225 ctccacctcccgttgctcgcggaggacaagaatgtgccgtatgtctttgt 274 || || || ||| |||| ||||||||||| || |||||||| ||||| Sbjct: 353 ctgcatctgccgctgctgtgcgaggacaagaacgtcccgtatgtgtttgt 402
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 126 cagctcaagaagggagccaacgaagcgaccaagactctcaac 167 ||||||||||||||||||||||| || |||||||| |||||| Sbjct: 3187507 cagctcaagaagggagccaacgaggccaccaagaccctcaac 3187548
>ref|XM_744631.1| Aspergillus fumigatus Af293 snRNP and snoRNP protein Snu13 (Afu2g05950) partial mRNA Length = 381 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 126 cagctcaagaagggagccaacgaagcgaccaagactctcaa 166 |||||||||||||| |||||||| || |||||||||||||| Sbjct: 94 cagctcaagaagggtgccaacgaggctaccaagactctcaa 134
>dbj|AB226025.1| Aspergillus oryzae cDNA, contig sequence: AoEST2881 Length = 703 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 126 cagctcaagaagggagccaacgaagcgaccaagactctcaa 166 ||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 167 cagctgaagaagggagcaaacgaagcgaccaagacactcaa 207
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 126 cagctcaagaagggagccaacgaagcgaccaagactctcaa 166 ||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 1888725 cagctgaagaagggagcaaacgaagcgaccaagacactcaa 1888685
>gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24 Length = 101458 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 253 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 312 ||||||| || ||||||||||| ||||||||||||||| | || | || ||||| |||| Sbjct: 8737 agaatgttccttatgtctttgtgccttcaaagcaagccttgggaagagcctgtggtgtga 8678 Query: 313 ctaggccggtcattgcttgttcagt 337 |||| || || || ||||||||||| Sbjct: 8677 ctagacctgttatcgcttgttcagt 8653 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 117 aactacaagcagctcaagaaggg 139 ||||||||||||||||||||||| Sbjct: 9295 aactacaagcagctcaagaaggg 9273
>ref|NM_118364.1| Arabidopsis thaliana RNA binding / structural constituent of ribosome AT4G22380 mRNA, complete cds Length = 387 Score = 56.0 bits (28), Expect = 1e-04 Identities = 175/224 (78%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||||||||||| || ||||| ||||| || | ||| | ||||| Sbjct: 91 aactacaagcagcttaagaagggagctaatgaagctaccaaaacattgaaccgtggaatc 150 Query: 177 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 236 || |||||||| || ||||| ||||| | || || || || || || || || || || Sbjct: 151 tctgagttcgttgttatggctgctgatgctgaaccacttgagattcttcttcatcttcct 210 Query: 237 ttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttggg 296 ||||| || || || ||||||||||| ||||| ||||| ||||| || ||||| | || Sbjct: 211 ttgcttgccgaagataagaatgtgccatatgtgtttgtaccttcgaaacaagcattggga 270 Query: 297 cgtgcttgtggagtgactaggccggtcattgcttgttcagtgac 340 | || |||||||| || || || || ||||||||||||||||| Sbjct: 271 agagcatgtggagtaacaagacctgttattgcttgttcagtgac 314
>ref|XM_416225.1| PREDICTED: Gallus gallus similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1) (LOC417986), mRNA Length = 782 Score = 56.0 bits (28), Expect = 1e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 45 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 104 |||||||| || ||||||||||| ||||| ||||| || | ||| | || ||| |||| Sbjct: 82 aaccccaaagcttacccgctggctgacgcacagctcaccaagacgctgctggacctcgtg 141 Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 164 |||||| || ||||||||||||||| || |||||||||||||| ||||| || || Sbjct: 142 cagcagtcctgcaactacaagcagctacgcaaaggagccaacgaagccaccaaaacactg 201 Query: 165 aacaggggaatatcggagttcgtggtgatggc 196 ||| | |||||| | |||||| | |||||||| Sbjct: 202 aaccgaggaatagcagagttcatcgtgatggc 233
>ref|XM_956324.1| Neurospora crassa OR74A probable 13 kD U4/U6.U5 snRNP associate protein [MIPS] (NCU01331.1) partial mRNA Length = 387 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 91 tcctcgacatcgtccagcaggccgccaactacaagcagctcaagaagggagccaacgaag 150 |||||||| ||||||||||||| | |||||| |||||||||||||| |||||||| | Sbjct: 65 tcctcgactgcgtccagcaggccagccactacagacagctcaagaagggtgccaacgagg 124 Query: 151 cgaccaag 158 | |||||| Sbjct: 125 ccaccaag 132
>ref|XM_326823.1| Neurospora crassa OR74A probable 13 kD U4/U6.U5 snRNP associate protein [MIPS] (NCU01331.1) partial mRNA Length = 387 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 91 tcctcgacatcgtccagcaggccgccaactacaagcagctcaagaagggagccaacgaag 150 |||||||| ||||||||||||| | |||||| |||||||||||||| |||||||| | Sbjct: 65 tcctcgactgcgtccagcaggccagccactacagacagctcaagaagggtgccaacgagg 124 Query: 151 cgaccaag 158 | |||||| Sbjct: 125 ccaccaag 132
>emb|AL451017.1|NC12F11 Neurospora crassa DNA linkage group V Cosmid contig 12F11 Length = 74317 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 91 tcctcgacatcgtccagcaggccgccaactacaagcagctcaagaagggagccaacgaag 150 |||||||| ||||||||||||| | |||||| |||||||||||||| |||||||| | Sbjct: 35133 tcctcgactgcgtccagcaggccagccactacagacagctcaagaagggtgccaacgagg 35074 Query: 151 cgaccaag 158 | |||||| Sbjct: 35073 ccaccaag 35066
>gb|BT024580.1| Arabidopsis thaliana At4g22380 mRNA, complete cds Length = 387 Score = 56.0 bits (28), Expect = 1e-04 Identities = 175/224 (78%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||||||||||| || ||||| ||||| || | ||| | ||||| Sbjct: 91 aactacaagcagcttaagaagggagctaatgaagctaccaaaacattgaaccgtggaatc 150 Query: 177 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 236 || |||||||| || ||||| ||||| | || || || || || || || || || || Sbjct: 151 tctgagttcgttgttatggctgctgatgctgaaccacttgagattcttcttcatcttcct 210 Query: 237 ttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttggg 296 ||||| || || || ||||||||||| ||||| ||||| ||||| || ||||| | || Sbjct: 211 ttgcttgccgaagataagaatgtgccatatgtgtttgtaccttcgaaacaagcattggga 270 Query: 297 cgtgcttgtggagtgactaggccggtcattgcttgttcagtgac 340 | || |||||||| || || || || ||||||||||||||||| Sbjct: 271 agagcatgtggagtaacaagacctgttattgcttgttcagtgac 314
>emb|BX950527.2| Gallus gallus finished cDNA, clone ChEST568g13 Length = 801 Score = 56.0 bits (28), Expect = 1e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 45 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 104 |||||||| || ||||||||||| ||||| ||||| || | ||| | || ||| |||| Sbjct: 101 aaccccaaagcttacccgctggctgacgcacagctcaccaagacgctgctggacctcgtg 160 Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 164 |||||| || ||||||||||||||| || |||||||||||||| ||||| || || Sbjct: 161 cagcagtcctgcaactacaagcagctacgcaaaggagccaacgaagccaccaaaacactg 220 Query: 165 aacaggggaatatcggagttcgtggtgatggc 196 ||| | |||||| | |||||| | |||||||| Sbjct: 221 aaccgaggaatagcagagttcatcgtgatggc 252
>emb|BX934076.2| Gallus gallus finished cDNA, clone ChEST55d24 Length = 1170 Score = 56.0 bits (28), Expect = 1e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 45 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 104 |||||||| || ||||||||||| ||||| ||||| || | ||| | || ||| |||| Sbjct: 116 aaccccaaagcttacccgctggctgacgcacagctcaccaagacgctgctggacctcgtg 175 Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 164 |||||| || ||||||||||||||| || |||||||||||||| ||||| || || Sbjct: 176 cagcagtcctgcaactacaagcagctacgcaaaggagccaacgaagccaccaaaacactg 235 Query: 165 aacaggggaatatcggagttcgtggtgatggc 196 ||| | |||||| | |||||| | |||||||| Sbjct: 236 aaccgaggaatagcagagttcatcgtgatggc 267
>emb|BX932329.2| Gallus gallus finished cDNA, clone ChEST359i7 Length = 818 Score = 56.0 bits (28), Expect = 1e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 45 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 104 |||||||| || ||||||||||| ||||| ||||| || | ||| | || ||| |||| Sbjct: 190 aaccccaaagcttacccgctggctgacgcacagctcaccaagacgctgctggacctcgtg 249 Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 164 |||||| || ||||||||||||||| || |||||||||||||| ||||| || || Sbjct: 250 cagcagtcctgcaactacaagcagctacgcaaaggagccaacgaagccaccaaaacactg 309 Query: 165 aacaggggaatatcggagttcgtggtgatggc 196 ||| | |||||| | |||||| | |||||||| Sbjct: 310 aaccgaggaatagcagagttcatcgtgatggc 341
>emb|BX931143.2| Gallus gallus finished cDNA, clone ChEST203b22 Length = 723 Score = 56.0 bits (28), Expect = 1e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 45 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 104 |||||||| || ||||||||||| ||||| ||||| || | ||| | || ||| |||| Sbjct: 95 aaccccaaagcttacccgctggctgacgcacagctcaccaagacgctgctggacctcgtg 154 Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 164 |||||| || ||||||||||||||| || |||||||||||||| ||||| || || Sbjct: 155 cagcagtcctgcaactacaagcagctacgcaaaggagccaacgaagccaccaaaacactg 214 Query: 165 aacaggggaatatcggagttcgtggtgatggc 196 ||| | |||||| | |||||| | |||||||| Sbjct: 215 aaccgaggaatagcagagttcatcgtgatggc 246
>emb|CR352576.1| Gallus gallus finished cDNA, clone ChEST831m24 Length = 727 Score = 56.0 bits (28), Expect = 1e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 45 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 104 |||||||| || ||||||||||| ||||| ||||| || | ||| | || ||| |||| Sbjct: 99 aaccccaaagcttacccgctggctgacgcacagctcaccaagacgctgctggacctcgtg 158 Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 164 |||||| || ||||||||||||||| || |||||||||||||| ||||| || || Sbjct: 159 cagcagtcctgcaactacaagcagctacgcaaaggagccaacgaagccaccaaaacactg 218 Query: 165 aacaggggaatatcggagttcgtggtgatggc 196 ||| | |||||| | |||||| | |||||||| Sbjct: 219 aaccgaggaatagcagagttcatcgtgatggc 250
>emb|BX936171.1| Gallus gallus finished cDNA, clone ChEST145m8 Length = 1144 Score = 56.0 bits (28), Expect = 1e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 45 aaccccaaggcctacccgctggcggacgcgcagctgacgataacgatcctcgacatcgtc 104 |||||||| || ||||||||||| ||||| ||||| || | ||| | || ||| |||| Sbjct: 90 aaccccaaagcttacccgctggctgacgcacagctcaccaagacgctgctggacctcgtg 149 Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 164 |||||| || ||||||||||||||| || |||||||||||||| ||||| || || Sbjct: 150 cagcagtcctgcaactacaagcagctacgcaaaggagccaacgaagccaccaaaacactg 209 Query: 165 aacaggggaatatcggagttcgtggtgatggc 196 ||| | |||||| | |||||| | |||||||| Sbjct: 210 aaccgaggaatagcagagttcatcgtgatggc 241
>gb|AY086674.1| Arabidopsis thaliana clone 2673 mRNA, complete sequence Length = 624 Score = 56.0 bits (28), Expect = 1e-04 Identities = 175/224 (78%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||||||||||| || ||||| ||||| || | ||| | ||||| Sbjct: 169 aactacaagcagcttaagaagggagctaatgaagctaccaaaacattgaaccgtggaatc 228 Query: 177 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 236 || |||||||| || ||||| ||||| | || || || || || || || || || || Sbjct: 229 tctgagttcgttgttatggctgctgatgctgaaccacttgagattcttcttcatcttcct 288 Query: 237 ttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttggg 296 ||||| || || || ||||||||||| ||||| ||||| ||||| || ||||| | || Sbjct: 289 ttgcttgccgaagataagaatgtgccatatgtgtttgtaccttcgaaacaagcattggga 348 Query: 297 cgtgcttgtggagtgactaggccggtcattgcttgttcagtgac 340 | || |||||||| || || || || ||||||||||||||||| Sbjct: 349 agagcatgtggagtaacaagacctgttattgcttgttcagtgac 392
>gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosome 9, complete sequence Length = 215980 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 84686 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 84745 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 84746 tctgagttcattgtgatggcagc 84768
>ref|XM_509501.1| PREDICTED: Pan troglodytes similar to checkpoint with forkhead and ring finger domains (LOC452391), mRNA Length = 1923 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| |||| |||||||||| || ||||| || || |||||||| || Sbjct: 273 aactacaagcagcttcagaaaagagccaacgaggccaccaaaacccttaacaggggcatc 214 Query: 177 tcggagttcgtggtgatggcagctgacacggagcc 211 || |||||| | |||||||| || ||||| ||||| Sbjct: 213 tctgagttcatcgtgatggctgcagacaccgagcc 179
>ref|NM_011482.3| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) (Nhp2l1), mRNA Length = 1259 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 202 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 261 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 262 tctgagttcattgtgatggcagc 284
>ref|XM_992454.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC434401), mRNA Length = 1274 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 201 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 260 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 261 tctgagttcattgtgatggcagc 283
>ref|XM_486217.4| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC434401), mRNA Length = 1274 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 201 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 260 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 261 tctgagttcattgtgatggcagc 283
>gb|BC046579.1| Xenopus laevis NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone MGC:53430 IMAGE:5571836), complete cds Length = 812 Score = 54.0 bits (27), Expect = 6e-04 Identities = 168/215 (78%) Strand = Plus / Plus Query: 120 tacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaatatcg 179 |||||||||||| ||||| ||||||||||| || ||||| || ||||| || ||||| Sbjct: 179 tacaagcagctccgcaagggtgccaacgaagctacaaagaccctaaacagaggcatatct 238 Query: 180 gagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccgttg 239 |||||| | || ||||||||||| | || || || || ||| | || ||||||||| | Sbjct: 239 gagttcatagtcatggcagctgatgcagaacctctggagatcattctacacctcccgctc 298 Query: 240 ctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgt 299 || ||||||||||| || || ||||| ||||| | ||| ||||| || ||||| | Sbjct: 299 ctatgtgaggacaagaacgtcccctatgtgtttgtgcgttccaagcaggcacttggaaga 358 Query: 300 gcttgtggagtgactaggccggtcattgcttgttc 334 ||||||||||| ||||||| || ||| ||||||| Sbjct: 359 gcttgtggagtctctaggccagtgatttcttgttc 393
>gb|BC083315.1| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone MGC:101925 IMAGE:5714819), complete cds Length = 1201 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 122 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 181 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 182 tctgagttcattgtgatggcagc 204
>gb|BC054450.1| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone MGC:62619 IMAGE:6491298), complete cds Length = 1218 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 146 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 205 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 206 tctgagttcattgtgatggcagc 228
>gb|BC026755.1| Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone MGC:25294 IMAGE:3154066), complete cds Length = 1226 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 146 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 205 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 206 tctgagttcattgtgatggcagc 228
>gb|BC058493.1| Rattus norvegicus similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (OTK27), mRNA (cDNA clone MGC:72932 IMAGE:6887059), complete cds Length = 635 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 205 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 264 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 265 tctgagttcattgtgatggcagc 287
>dbj|AK134943.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430523H23 product:sperm specific antigen 1, full insert sequence Length = 1763 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 138 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 197 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 198 tctgagttcattgtgatggcagc 220
>dbj|AK145391.1| Mus musculus morula whole body morula cDNA, RIKEN full-length enriched library, clone:I0C0032L12 product:sperm specific antigen 1, full insert sequence Length = 1259 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 202 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 261 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 262 tctgagttcattgtgatggcagc 284
>dbj|AK145608.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0021G14 product:sperm specific antigen 1, full insert sequence Length = 1244 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 182 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 241 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 242 tctgagttcattgtgatggcagc 264
>dbj|AK168930.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:I920065L05 product:sperm specific antigen 1, full insert sequence Length = 1210 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 153 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 212 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 213 tctgagttcattgtgatggcagc 235
>dbj|AK168808.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920056H18 product:NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (OTK27) homolog [Homo sapiens], full insert sequence Length = 836 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 170 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 229 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 230 tctgagttcattgtgatggcagc 252
>dbj|AK169103.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920080B21 product:sperm specific antigen 1, full insert sequence Length = 1247 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 184 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 243 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 244 tctgagttcattgtgatggcagc 266
>gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228481 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| |||| ||||||| ||||| | ||| ||||||||||| || || Sbjct: 83355 aactacaagcagcttcagaaaggagccagtgaagccagcaaaactctcaacagaggcatc 83414 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 83415 tctgagttcattgtgatggcagc 83437
>gb|AC156559.3| Mus musculus BAC clone RP24-421K17 from chromosome 13, complete sequence Length = 151183 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||||||| |||| |||| |||||||| ||||| ||||| ||||||||||| || || Sbjct: 65791 aactacaagaagcttcagaaaggagccaatgaagccaccaaaactctcaacagaggcatc 65732 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | |||| |||||| Sbjct: 65731 tctgagttcattgtgaaggcagc 65709
>dbj|AK004489.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1190005A22 product:sperm specific antigen 1, full insert sequence Length = 1210 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 148 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 207 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 208 tctgagttcattgtgatggcagc 230
>gb|AC127070.10| Homo sapiens 12 BAC RP11-46H11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181012 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| |||| |||||||||| || ||||| || || |||||||| || Sbjct: 49742 aactacaagcagcttcagaaaagagccaacgaggccaccaaaacccttaacaggggcatc 49683 Query: 177 tcggagttcgtggtgatggcagctgacacggagcc 211 || |||||| | |||||||| || ||||| ||||| Sbjct: 49682 tctgagttcatcgtgatggctgcagacaccgagcc 49648
>emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chromosome 9, complete sequence Length = 228508 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 209762 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 209821 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 209822 tctgagttcattgtgatggcagc 209844
>ref|NM_212515.1| Rattus norvegicus similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (OTK27) (MGC72932), mRNA Length = 635 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 205 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 264 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 265 tctgagttcattgtgatggcagc 287
>gb|BC061279.1| Xenopus tropicalis hypothetical protein MGC75724, mRNA (cDNA clone MGC:75724 IMAGE:5380980), complete cds Length = 848 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 249 gacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtgga 308 ||||||||||| || ||||| ||||| | || |||||||| ||||| | ||||||||| Sbjct: 328 gacaagaatgtcccctatgtgtttgtgcgctccaagcaagcacttggaagagcttgtgga 387 Query: 309 gtgactaggccggtcattgcttgttcagtgacca 342 || ||||||| || ||||||||| |||| |||| Sbjct: 388 gtctctaggccagtgattgcttgtgcagtcacca 421
>gb|BC066453.1| Danio rerio zgc:56066, mRNA (cDNA clone MGC:77417 IMAGE:6970302), complete cds Length = 1786 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 164 |||||||| ||||| ||||| ||||| | ||| || ||||||||||| || || || || Sbjct: 225 cagcaggcagccaattacaaacagctgaggaaaggggccaacgaagccactaaaaccctg 284 Query: 165 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgct 214 ||| ||||||| || |||||| | |||||||| || ||| | |||||||| Sbjct: 285 aaccggggaatctcagagttcatcgtgatggcggccgacgcagagccgct 334
>ref|XM_365765.1| Magnaporthe grisea 70-15 hypothetical protein (MG02467.4) partial mRNA Length = 381 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 126 cagctcaagaagggagccaacgaagcgaccaagactct 163 ||||| ||||||||||||||||| || ||||||||||| Sbjct: 94 cagctgaagaagggagccaacgaggctaccaagactct 131
>ref|XM_860169.1| PREDICTED: Canis familiaris similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1), transcript variant 2 (LOC609886), mRNA Length = 1394 Score = 52.0 bits (26), Expect = 0.002 Identities = 170/218 (77%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||||||||| || || || |||||||| || || Sbjct: 133 aactacaagcagcttcggaaaggagccaacgaagccactaaaaccctcaacagaggcatc 192 Query: 177 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 236 || |||||| | |||||||| || ||| | |||| || |||||| |||| ||||| ||| Sbjct: 193 tctgagttcatcgtgatggctgcagacgctaagcctctggaaatcatcctgcaccttccg 252 Query: 237 ttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttggg 296 |||| || || ||||| ||||| || || ||||| | || ||||| ||||| ||| Sbjct: 253 ctgctgtgtgaagataagaacgtgccctacgtgtttgtgcgctccaagcaggccctcggg 312 Query: 297 cgtgcttgtggagtgactaggccggtcattgcttgttc 334 || || ||||| ||| | ||||| |||||||| ||||| Sbjct: 313 cgggcctgtggggtgtccaggcctgtcattgcctgttc 350
>ref|XM_847115.1| PREDICTED: Canis familiaris similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1), transcript variant 1 (LOC609886), mRNA Length = 735 Score = 52.0 bits (26), Expect = 0.002 Identities = 170/218 (77%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||||||||| || || || |||||||| || || Sbjct: 105 aactacaagcagcttcggaaaggagccaacgaagccactaaaaccctcaacagaggcatc 164 Query: 177 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 236 || |||||| | |||||||| || ||| | |||| || |||||| |||| ||||| ||| Sbjct: 165 tctgagttcatcgtgatggctgcagacgctaagcctctggaaatcatcctgcaccttccg 224 Query: 237 ttgctcgcggaggacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttggg 296 |||| || || ||||| ||||| || || ||||| | || ||||| ||||| ||| Sbjct: 225 ctgctgtgtgaagataagaacgtgccctacgtgtttgtgcgctccaagcaggccctcggg 284 Query: 297 cgtgcttgtggagtgactaggccggtcattgcttgttc 334 || || ||||| ||| | ||||| |||||||| ||||| Sbjct: 285 cgggcctgtggggtgtccaggcctgtcattgcctgttc 322
>ref|XR_004088.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC636276), mRNA Length = 1155 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 91 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 150 Query: 177 tcggagttcgtggtgatggcag 198 || |||||| | |||||||||| Sbjct: 151 tctgagttcattgtgatggcag 172
>emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 57 Length = 199577 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||||||||||| || ||||| ||||| || | ||| | ||||| Sbjct: 49539 aactacaagcagcttaagaagggagctaatgaagctaccaaaacattgaaccgtggaatc 49480 Query: 177 tcggagttcgtggtgatggcagctga 202 || |||||||| || ||||| ||||| Sbjct: 49479 tctgagttcgttgttatggctgctga 49454 Score = 40.1 bits (20), Expect = 8.7 Identities = 71/88 (80%) Strand = Plus / Minus Query: 253 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 312 |||||||||| ||||| ||||| ||||| || ||||| | || | || |||||||| | Sbjct: 48908 agaatgtgccatatgtgtttgtaccttcgaaacaagcattgggaagagcatgtggagtaa 48849 Query: 313 ctaggccggtcattgcttgttcagtgac 340 | || || || ||||||||||||||||| Sbjct: 48848 caagacctgttattgcttgttcagtgac 48821
>emb|AL033545.2|ATF7K2 Arabidopsis thaliana DNA chromosome 4, BAC clone F7K2 (ESSA project) Length = 106702 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||||||||||| || ||||| ||||| || | ||| | ||||| Sbjct: 731 aactacaagcagcttaagaagggagctaatgaagctaccaaaacattgaaccgtggaatc 672 Query: 177 tcggagttcgtggtgatggcagctga 202 || |||||||| || ||||| ||||| Sbjct: 671 tctgagttcgttgttatggctgctga 646 Score = 40.1 bits (20), Expect = 8.7 Identities = 71/88 (80%) Strand = Plus / Minus Query: 253 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 312 |||||||||| ||||| ||||| ||||| || ||||| | || | || |||||||| | Sbjct: 100 agaatgtgccatatgtgtttgtaccttcgaaacaagcattgggaagagcatgtggagtaa 41 Query: 313 ctaggccggtcattgcttgttcagtgac 340 | || || || ||||||||||||||||| Sbjct: 40 caagacctgttattgcttgttcagtgac 13
>ref|XM_697178.1| PREDICTED: Danio rerio hypothetical protein LOC554671 (LOC554671), mRNA Length = 1702 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 105 cagcaggccgccaactacaagcagctcaagaagggagccaacgaagcgaccaagactctc 164 |||||||| ||||| ||||| ||||| | ||| || ||||||||||| || || || || Sbjct: 223 cagcaggcagccaattacaaacagctgaggaaaggggccaacgaagccactaaaaccctg 282 Query: 165 aacaggggaatatcggagttcgtggtgatggcagctgacacggagccgct 214 ||| ||||||| || |||||| | |||||||| || ||| | |||||||| Sbjct: 283 aaccggggaatctcagagttcatcgtgatggcggccgacgcagagccgct 332
>ref|NM_203663.1| Xenopus tropicalis hypothetical protein MGC75724 (MGC75724), mRNA Length = 848 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 249 gacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtgga 308 ||||||||||| || ||||| ||||| | || |||||||| ||||| | ||||||||| Sbjct: 328 gacaagaatgtcccctatgtgtttgtgcgctccaagcaagcacttggaagagcttgtgga 387 Query: 309 gtgactaggccggtcattgcttgttcagtgacca 342 || ||||||| || ||||||||| |||| |||| Sbjct: 388 gtctctaggccagtgattgcttgtgcagtcacca 421
>emb|CR760372.2| Xenopus tropicalis finished cDNA, clone TNeu005n20 Length = 789 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 249 gacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtgga 308 ||||||||||| || ||||| ||||| | || |||||||| ||||| | ||||||||| Sbjct: 284 gacaagaatgtcccctatgtgtttgtgcgctccaagcaagcacttggaagagcttgtgga 343 Query: 309 gtgactaggccggtcattgcttgttcagtgacca 342 || ||||||| || ||||||||| |||| |||| Sbjct: 344 gtctctaggccagtgattgcttgtgcagtcacca 377
>emb|CR761482.2| Xenopus tropicalis finished cDNA, clone TGas123b15 Length = 808 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 249 gacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtgga 308 ||||||||||| || ||||| ||||| | || |||||||| ||||| | ||||||||| Sbjct: 284 gacaagaatgtcccctatgtgtttgtgcgctccaagcaagcacttggaagagcttgtgga 343 Query: 309 gtgactaggccggtcattgcttgttcagtgacca 342 || ||||||| || ||||||||| |||| |||| Sbjct: 344 gtctctaggccagtgattgcttgtgcagtcacca 377
>emb|AL929165.9| Mouse DNA sequence from clone RP23-446D4 on chromosome 2, complete sequence Length = 181326 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 39936 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 39877 Query: 177 tcggagttcgtggtgatggcag 198 || |||||| | |||||||||| Sbjct: 39876 tctgagttcattgtgatggcag 39855
>ref|NM_117330.2| Arabidopsis thaliana RNA binding / structural constituent of ribosome AT4G12600 mRNA, complete cds Length = 754 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 252 aagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgg 295 ||||||||||||||||| ||||| || || || ||||||||||| Sbjct: 320 aagaatgtgccgtatgtgtttgtgccatcgaaacaagcccttgg 363
>gb|AF361618.1| Arabidopsis thaliana AT4g12600/T1P17_190 mRNA, complete cds Length = 679 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 252 aagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgg 295 ||||||||||||||||| ||||| || || || ||||||||||| Sbjct: 296 aagaatgtgccgtatgtgtttgtgccatcgaaacaagcccttgg 339
>gb|AY055095.1| Arabidopsis thaliana AT4g12600/T1P17_190 mRNA, complete cds Length = 387 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 252 aagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgg 295 ||||||||||||||||| ||||| || || || ||||||||||| Sbjct: 226 aagaatgtgccgtatgtgtttgtgccatcgaaacaagcccttgg 269
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 132 aagaagggagccaacgaagcgaccaagactct 163 |||||||| |||||||| |||||||||||||| Sbjct: 497936 aagaagggtgccaacgaggcgaccaagactct 497967
>gb|AY087261.1| Arabidopsis thaliana clone 33381 mRNA, complete sequence Length = 715 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 252 aagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgg 295 ||||||||||||||||| ||||| || || || ||||||||||| Sbjct: 320 aagaatgtgccgtatgtgtttgtgccatcgaaacaagcccttgg 363
>ref|NM_210145.1| Eremothecium gossypii AEL070Wp (AEL070W), mRNA Length = 384 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 132 aagaagggagccaacgaagcgaccaagactct 163 |||||||| |||||||| |||||||||||||| Sbjct: 103 aagaagggtgccaacgaggcgaccaagactct 134
>ref|XM_924350.2| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1, transcript variant 2 (LOC637555), mRNA Length = 1274 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 200 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 259 Query: 177 tcggagttcgtggtgatggcagc 199 || ||||| | ||||||||||| Sbjct: 260 tctgagttaattgtgatggcagc 282
>ref|XR_004053.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC672066), mRNA Length = 836 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || | |||||| || || Sbjct: 91 aactacaagcagcttcggaaaggagccaatgaagccaccaaaacccccaacagaggcatc 150 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 151 tctgagttcattgtgatggcagc 173
>ref|XM_001003565.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC667539), mRNA Length = 897 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || | |||||| || || Sbjct: 91 aactacaagcagcttcggaaaggagccaatgaagccaccaaaacccccaacagaggcatc 150 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 151 tctgagttcattgtgatggcagc 173
>ref|XM_910204.2| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC633304), mRNA Length = 897 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || | |||||| || || Sbjct: 91 aactacaagcagcttcggaaaggagccaatgaagccaccaaaacccccaacagaggcatc 150 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 151 tctgagttcattgtgatggcagc 173
>ref|XM_799370.1| Trypanosoma cruzi strain CL Brener ribosomal protein S6 (Tc00.1047053509943.30) partial mRNA Length = 381 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 246 gaggacaagaatgtgccgtatgtctttgtcccttc 280 ||||||||||| ||||||||||| ||||| ||||| Sbjct: 217 gaggacaagaacgtgccgtatgtttttgtgccttc 251
>gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome 2, complete sequence Length = 180931 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || | |||||| || || Sbjct: 63982 aactacaagcagcttcggaaaggagccaatgaagccaccaaaacccccaacagaggcatc 64041 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 64042 tctgagttcattgtgatggcagc 64064
>ref|XM_815179.1| Trypanosoma cruzi strain CL Brener ribosomal protein S6 (Tc00.1047053508277.120) partial mRNA Length = 381 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 246 gaggacaagaatgtgccgtatgtctttgtcccttc 280 ||||||||||| ||||||||||| ||||| ||||| Sbjct: 217 gaggacaagaacgtgccgtatgtttttgtgccttc 251
>emb|BX000992.5| Human DNA sequence from clone RP11-431P13 on chromosome X, complete sequence Length = 46289 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 8 acaaactcgtcaagggaagatga 30 ||||||||||||||||||||||| Sbjct: 18490 acaaactcgtcaagggaagatga 18468
>ref|XM_970157.1| PREDICTED: Tribolium castaneum similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC664143), mRNA Length = 405 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 249 gacaagaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtgga 308 |||||||||||||||||||| || |||| || || || || || ||||| |||||||| Sbjct: 241 gacaagaatgtgccgtatgttttcgtccgctcgaaacaggcactggggcgcgcttgtggc 300 Query: 309 gtgactaggccggtcattgcttg 331 || | ||| ||||||||||||| Sbjct: 301 gtctcaaggtcggtcattgcttg 323
>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34 Length = 196107 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 253 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgg 295 |||||||||||||||| ||||| || || || ||||||||||| Sbjct: 126175 agaatgtgccgtatgtgtttgtgccatcgaaacaagcccttgg 126217
>emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome 4, BAC clone T1P17 (ESSA project) Length = 137519 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 253 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgg 295 |||||||||||||||| ||||| || || || ||||||||||| Sbjct: 121643 agaatgtgccgtatgtgtttgtgccatcgaaacaagcccttgg 121685
>ref|XM_345321.2| PREDICTED: Rattus norvegicus similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1) (LOC365987), mRNA Length = 543 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || | Sbjct: 298 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggtgtc 357 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 358 tctgagttcattgtgatggcagc 380
>emb|BX284624.4| Mouse DNA sequence from clone RP23-299A2 on chromosome 2, complete sequence Length = 209836 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || | |||||| || || Sbjct: 188909 aactacaagcagcttcggaaaggagccaatgaagccaccaaaacccccaacagaggcatc 188850 Query: 177 tcggagttcgtggtgatggcagc 199 || |||||| | ||||||||||| Sbjct: 188849 tctgagttcattgtgatggcagc 188827
>emb|AL133273.5| Human DNA sequence from clone RP11-518F7 on chromosome Xq26.3-27.3, complete sequence Length = 42375 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 acaaactcgtcaagggaagatga 30 ||||||||||||||||||||||| Sbjct: 25900 acaaactcgtcaagggaagatga 25922
>ref|XM_515161.1| PREDICTED: Pan troglodytes similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1) (LOC458869), mRNA Length = 912 Score = 44.1 bits (22), Expect = 0.56 Identities = 115/146 (78%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 484 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 543 Query: 177 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 236 || |||||| | |||||||| || ||| | ||||| || || ||| | || ||||||||| Sbjct: 544 tctgagttcatcgtgatggctgcagacgccgagccactggagatcattctgcacctcccg 603 Query: 237 ttgctcgcggaggacaagaatgtgcc 262 |||| || |||||||||||||| Sbjct: 604 ctgctgtgtgaagacaagaatgtgcc 629
>gb|DQ214255.1| Taeniopygia guttata clone 0061P0016A06 NHP2 non-histone chromosome protein 2-like 1-like mRNA, complete sequence Length = 1118 Score = 44.1 bits (22), Expect = 0.56 Identities = 124/158 (78%) Strand = Plus / Plus Query: 135 aagggagccaacgaagcgaccaagactctcaacaggggaatatcggagttcgtggtgatg 194 ||||||||||| ||||| ||||| || || ||||| || ||| | |||||| | |||||| Sbjct: 139 aagggagccaatgaagccaccaaaacactgaacagagggatagcagagttcattgtgatg 198 Query: 195 gcagctgacacggagccgctcgaaatcctcctccacctcccgttgctcgcggaggacaag 254 ||||| || ||||||| | || ||| |||| |||||||| | ||| ||||||||| Sbjct: 199 gcagcagatgcggagcccttggagatcatcctgcacctccctcttctctgcgaggacaag 258 Query: 255 aatgtgccgtatgtctttgtcccttcaaagcaagccct 292 || || || ||||| ||||| | || ||||||||||| Sbjct: 259 aacgtaccctatgtgtttgtgcgctccaagcaagccct 296
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 44 caaccccaaggcctacccgctggcgg 69 ||||||||||||||||||| |||||| Sbjct: 1496556 caaccccaaggcctacccggtggcgg 1496581
>ref|XM_001005500.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC626361), mRNA Length = 1229 Score = 44.1 bits (22), Expect = 0.56 Identities = 67/82 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 156 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 215 Query: 177 tcggagttcgtggtgatggcag 198 || |||||| | ||||| |||| Sbjct: 216 tctgagttcattgtgatagcag 237
>ref|XM_904370.2| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC630757), mRNA Length = 1228 Score = 44.1 bits (22), Expect = 0.56 Identities = 67/82 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 156 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 215 Query: 177 tcggagttcgtggtgatggcag 198 || |||||| | ||||| |||| Sbjct: 216 tctgagttcattgtgatagcag 237
>ref|XM_973339.1| PREDICTED: Mus musculus similar to Nhp2 non-histone chromosome protein 2-like 1 (LOC630757), mRNA Length = 1228 Score = 44.1 bits (22), Expect = 0.56 Identities = 67/82 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 156 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 215 Query: 177 tcggagttcgtggtgatggcag 198 || |||||| | ||||| |||| Sbjct: 216 tctgagttcattgtgatagcag 237
>gb|AC124909.3| Equus caballus clone CH241-91H15, complete sequence Length = 171421 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 518 tatattttgcaagactgttatg 539 |||||||||||||||||||||| Sbjct: 32552 tatattttgcaagactgttatg 32531
>ref|XM_317299.2| Anopheles gambiae str. PEST ENSANGP00000010500 (ENSANGG00000008011), partial mRNA Length = 384 Score = 44.1 bits (22), Expect = 0.56 Identities = 79/98 (80%) Strand = Plus / Plus Query: 177 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 236 ||||||||| | |||||||| || || |||||||| |||||||| | || || || ||| Sbjct: 148 tcggagttcatcgtgatggcggcggatgcggagccgatcgaaatcattctgcatcttccg 207 Query: 237 ttgctcgcggaggacaagaatgtgccgtatgtctttgt 274 |||| |||||||||||||||||||| || ||||| Sbjct: 208 ctgctgtgcgaggacaagaatgtgccgtacgtgtttgt 245 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 103 tccagcaggccgccaactacaagcagct 130 |||||||||| | ||||||||||||||| Sbjct: 74 tccagcaggcggtcaactacaagcagct 101
>emb|CT030166.8| Mouse DNA sequence from clone RP23-320I11 on chromosome 13, complete sequence Length = 222942 Score = 44.1 bits (22), Expect = 0.56 Identities = 67/82 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| || || Sbjct: 176731 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacagaggcatc 176790 Query: 177 tcggagttcgtggtgatggcag 198 || |||||| | ||||| |||| Sbjct: 176791 tctgagttcattgtgatagcag 176812
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 518 tatattttgcaagactgttatg 539 |||||||||||||||||||||| Sbjct: 1046020 tatattttgcaagactgttatg 1045999
>ref|XM_976843.1| PREDICTED: Mus musculus hypothetical LOC544888 (LOC544888), mRNA Length = 1406 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 tcgtggtgatggcagctgaca 204 ||||||||||||||||||||| Sbjct: 171 tcgtggtgatggcagctgaca 191
>ref|XM_909635.2| PREDICTED: Mus musculus hypothetical LOC544888 (LOC544888), mRNA Length = 1406 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 tcgtggtgatggcagctgaca 204 ||||||||||||||||||||| Sbjct: 171 tcgtggtgatggcagctgaca 191
>ref|XM_619025.3| PREDICTED: Mus musculus hypothetical LOC544888 (LOC544888), mRNA Length = 1406 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 tcgtggtgatggcagctgaca 204 ||||||||||||||||||||| Sbjct: 171 tcgtggtgatggcagctgaca 191
>gb|DQ014842.1| Uncultured bacterium clone M1_d03_3 16S ribosomal RNA gene, partial sequence Length = 1341 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 gacatcgtccagcaggccgcc 116 ||||||||||||||||||||| Sbjct: 713 gacatcgtccagcaggccgcc 693
>emb|AL135751.1|SPAC607 S.pombe chromosome I cosmid c607 Length = 19559 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 gaggacaagaatgtgccgtatgtctttgt 274 ||||||||||||||||| ||||| ||||| Sbjct: 3111 gaggacaagaatgtgccttatgtttttgt 3083
>gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome 12, complete sequence Length = 202807 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 tcgtggtgatggcagctgaca 204 ||||||||||||||||||||| Sbjct: 126648 tcgtggtgatggcagctgaca 126668
>ref|NM_001019023.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC607.03c), partial mRNA Length = 378 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 gaggacaagaatgtgccgtatgtctttgt 274 ||||||||||||||||| ||||| ||||| Sbjct: 211 gaggacaagaatgtgccttatgtttttgt 239
>gb|AY950656.1| Acanthamoeba castellanii snu13p-like mRNA, complete cds Length = 619 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 102 gtccagcaggccgccaactacaagcagct 130 ||||||||||| |||||||||||||||| Sbjct: 199 gtccagcaggcgaccaactacaagcagct 227
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 tcgacatcgtccagcaggccgccaa 118 ||||||||| ||||||||||||||| Sbjct: 1971206 tcgacatcgcccagcaggccgccaa 1971230
>gb|AF087136.1|AF087136 Schizosaccharomyces pombe SNU13 snRNP subunit homolog (snu13) gene, complete cds Length = 725 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 gaggacaagaatgtgccgtatgtctttgt 274 ||||||||||||||||| ||||| ||||| Sbjct: 414 gaggacaagaatgtgccttatgtttttgt 442
>emb|CR556713.11| Zebrafish DNA sequence from clone DKEY-28O14 in linkage group 11, complete sequence Length = 229692 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 tcgtgtgacacagtttttcag 464 ||||||||||||||||||||| Sbjct: 101756 tcgtgtgacacagtttttcag 101736
>gb|U95114.1|MMU95114 Mus musculus fertilization antigen-1 mRNA, complete cds Length = 642 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacag 169 |||||||||||||| ||| |||||||| ||||| ||||| || |||||||| Sbjct: 172 aactacaagcagcttcggaaaggagccaatgaagccaccaaaaccctcaacag 224
>gb|L02117.1|HIOSOMA Hippoglossus hippoglossus somatolactin mRNA, complete cds Length = 1602 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 602 acatgttttatgggcagttgaattt 626 |||||||||||||||||||| |||| Sbjct: 715 acatgttttatgggcagttgtattt 691
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 tacaagcagctcaagaaggg 139 |||||||||||||||||||| Sbjct: 435047 tacaagcagctcaagaaggg 435028
>gb|AE013216.1| Thermoanaerobacter tengcongensis MB4, section 243 of 244 of the complete genome Length = 10099 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 tgctgccattatgtctgccatctt 571 |||||| ||||||||||||||||| Sbjct: 611 tgctgcaattatgtctgccatctt 588
>ref|XM_389646.1| Gibberella zeae PH-1 chromosome 4 predicted protein (FG09470.1) partial mRNA Length = 1089 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 gtctcaaggatgccatcgagaagc 402 ||||||||||||||||| |||||| Sbjct: 11 gtctcaaggatgccatcaagaagc 34
>ref|XM_848546.1| PREDICTED: Canis familiaris similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (Sperm specific antigen 1) (Fertilization antigen 1) (FA-1) (LOC610953), mRNA Length = 397 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 138 ggagccaacgaagcgaccaagactctcaacag 169 |||||||||||||| ||||| || |||||||| Sbjct: 121 ggagccaacgaagccaccaaaaccctcaacag 152
>gb|AC115118.3| Mus musculus BAC clone RP23-84N24 from 5, complete sequence Length = 198448 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 598 agacacatgttttatgggca 617 |||||||||||||||||||| Sbjct: 120206 agacacatgttttatgggca 120187
>gb|AC004911.1| Homo sapiens PAC clone RP5-870F17 from 7, complete sequence Length = 155382 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 atgttaaatcatgctgccat 556 |||||||||||||||||||| Sbjct: 151779 atgttaaatcatgctgccat 151798
>emb|AL353661.41| Human DNA sequence from clone RP3-445O1 on chromosome 6, complete sequence Length = 61334 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ctcaaggatgccatcgagaa 400 |||||||||||||||||||| Sbjct: 15613 ctcaaggatgccatcgagaa 15632
>emb|BX901886.8| Zebrafish DNA sequence from clone CH211-261H19 in linkage group 1, complete sequence Length = 158729 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 gacacatgttttatgggcag 618 |||||||||||||||||||| Sbjct: 111534 gacacatgttttatgggcag 111553
>emb|CR541725.1| Homo sapiens full open reading frame cDNA clone RZPDo834A1029D for gene NHP2L1, NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae); complete cds, incl. stopcodon Length = 387 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 91 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 150 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 151 tctgagttcatcgtgatggc 170
>gb|AY991238.1| Uncultured bacterium clone C13_O06 16S ribosomal RNA gene, partial sequence Length = 1283 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tcgtccagcaggccgccaac 119 |||||||||||||||||||| Sbjct: 673 tcgtccagcaggccgccaac 654
>emb|AL021712.2|ATT10I14 Arabidopsis thaliana DNA chromosome 4, BAC clone T10I14 (ESSA project) Length = 82891 Score = 40.1 bits (20), Expect = 8.7 Identities = 71/88 (80%) Strand = Plus / Minus Query: 253 agaatgtgccgtatgtctttgtcccttcaaagcaagcccttgggcgtgcttgtggagtga 312 |||||||||| ||||| ||||| ||||| || ||||| | || | || |||||||| | Sbjct: 82813 agaatgtgccatatgtgtttgtaccttcgaaacaagcattgggaagagcatgtggagtaa 82754 Query: 313 ctaggccggtcattgcttgttcagtgac 340 | || || || ||||||||||||||||| Sbjct: 82753 caagacctgttattgcttgttcagtgac 82726
>emb|AJ292371.1|EMU292371 Echinococcus multilocularis mRNA for putative high mobility group-like nuclear protein 2 (hmg2 gene) Length = 483 Score = 40.1 bits (20), Expect = 8.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 120 tacaagcagctcaagaagggagccaacgaagcgaccaagactct 163 |||||||||||||| ||||| ||||| || || |||||| |||| Sbjct: 124 tacaagcagctcaaaaagggtgccaatgaggctaccaaggctct 167
>gb|BC095439.1| Homo sapiens NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), transcript variant 1, mRNA (cDNA clone MGC:111142 IMAGE:30719732), complete cds Length = 1499 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 173 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 232 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 233 tctgagttcatcgtgatggc 252
>gb|AC069079.11| Homo sapiens chromosome 10 clone RP11-539E19, complete sequence Length = 216006 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 ttttatgtttttcagctata 521 |||||||||||||||||||| Sbjct: 154333 ttttatgtttttcagctata 154314
>gb|AC099063.2| Homo sapiens chromosome 1 clone RP4-620F22, complete sequence Length = 110724 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 actctcaacaggggaatatc 178 |||||||||||||||||||| Sbjct: 13566 actctcaacaggggaatatc 13547
>ref|NM_005008.2| Homo sapiens NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) (NHP2L1), transcript variant 1, mRNA Length = 1601 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 285 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 344 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 345 tctgagttcatcgtgatggc 364
>ref|NM_001003796.1| Homo sapiens NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) (NHP2L1), transcript variant 2, mRNA Length = 1520 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 204 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 263 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 264 tctgagttcatcgtgatggc 283
>emb|CR623311.1| full-length cDNA clone CS0DE011YM23 of Placenta of Homo sapiens (human) Length = 1382 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 94 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 153 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 154 tctgagttcatcgtgatggc 173
>emb|CR623174.1| full-length cDNA clone CS0DA009YE02 of Neuroblastoma of Homo sapiens (human) Length = 1092 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 129 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 188 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 189 tctgagttcatcgtgatggc 208
>emb|CR616994.1| full-length cDNA clone CS0DK010YK23 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1366 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 132 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 191 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 192 tctgagttcatcgtgatggc 211
>emb|CR616990.1| full-length cDNA clone CS0DH007YI19 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1413 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 123 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 182 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 183 tctgagttcatcgtgatggc 202
>emb|CR614137.1| full-length cDNA clone CS0DJ005YB10 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1353 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 94 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 153 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 154 tctgagttcatcgtgatggc 173
>emb|CR613725.1| full-length cDNA clone CS0DC017YM06 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1459 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 172 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 231 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 232 tctgagttcatcgtgatggc 251
>emb|CR612873.1| full-length cDNA clone CS0DC024YJ07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1659 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 397 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 456 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 457 tctgagttcatcgtgatggc 476
>emb|CR605954.1| full-length cDNA clone CS0DC024YA08 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1626 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 363 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 422 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 423 tctgagttcatcgtgatggc 442
>emb|CR602484.1| full-length cDNA clone CS0DJ008YG20 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1481 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 188 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 247 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 248 tctgagttcatcgtgatggc 267
>emb|CR600974.1| full-length cDNA clone CS0DB009YP18 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1358 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 83 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 142 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 143 tctgagttcatcgtgatggc 162
>emb|CR600000.1| full-length cDNA clone CS0DJ012YD12 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 991 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 169 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 228 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 229 tctgagttcatcgtgatggc 248
>emb|CR595064.1| full-length cDNA clone CS0DN001YL05 of Adult brain of Homo sapiens (human) Length = 1349 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 94 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 153 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 154 tctgagttcatcgtgatggc 173
>emb|CR593477.1| full-length cDNA clone CS0DC025YF02 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1424 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 191 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 250 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 251 tctgagttcatcgtgatggc 270
>emb|CR593383.1| full-length cDNA clone CS0DK007YN07 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1449 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 182 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 241 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 242 tctgagttcatcgtgatggc 261
>emb|CR593004.1| full-length cDNA clone CS0DC023YC02 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1659 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 397 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 456 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 457 tctgagttcatcgtgatggc 476
>emb|CR591470.1| full-length cDNA clone CS0DB003YC24 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1630 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 355 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 414 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 415 tctgagttcatcgtgatggc 434
>gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, complete sequence Length = 142656 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 ttttatgtttttcagctata 521 |||||||||||||||||||| Sbjct: 53466 ttttatgtttttcagctata 53447
>ref|NM_079975.2| Drosophila melanogaster hoi-polloi CG3949-RA (hoip), mRNA Length = 570 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 135 aagggagccaacgaagcgaccaagactctcaa 166 |||||||||||||| || |||||||| ||||| Sbjct: 207 aagggagccaacgaggccaccaagaccctcaa 238
>gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, complete sequence Length = 154939 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 ttttatgtttttcagctata 521 |||||||||||||||||||| Sbjct: 4452 ttttatgtttttcagctata 4433
>dbj|AB169618.1| Macaca fascicularis brain cDNA, clone: QtrA-11204, similar to human NHP2 non-histone chromosome protein 2-like 1 (S.cerevisiae) (NHP2L1), mRNA, RefSeq: NM_005008.1 Length = 1534 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 198 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 257 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 258 tctgagttcatcgtgatggc 277
>gb|BC103317.2| Bos taurus cDNA clone MGC:129115 IMAGE:8122031, complete cds Length = 1438 Score = 40.1 bits (20), Expect = 8.7 Identities = 119/152 (78%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| || |||||||| || || ||||| || |||||||| || || Sbjct: 149 aactacaagcagcttcgaaaaggagccaatgaggccaccaaaaccctcaacagaggcatc 208 Query: 177 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 236 || |||||| | |||||||| || || ||||||| | || ||| |||| ||||||||| Sbjct: 209 tctgagttcattgtgatggccgcagatgcggagcccttggagatcatcctgcacctcccg 268 Query: 237 ttgctcgcggaggacaagaatgtgccgtatgt 268 |||| ||||||||||| ||||| ||||| Sbjct: 269 ctgctgtgtgaggacaagaacgtgccctatgt 300
>ref|NM_001026666.1| Caenorhabditis elegans Glucose-6-Phosphate Isomerase family member (gpi-1) (gpi-1) mRNA, complete cds Length = 1708 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 ccatcgagaagcttctcata 410 |||||||||||||||||||| Sbjct: 942 ccatcgagaagcttctcata 923
>ref|NM_001026667.1| Caenorhabditis elegans Glucose-6-Phosphate Isomerase family member (gpi-1) (gpi-1) mRNA, complete cds Length = 1914 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 ccatcgagaagcttctcata 410 |||||||||||||||||||| Sbjct: 995 ccatcgagaagcttctcata 976
>emb|AL115549.1|CNS01CHX Botrytis cinerea strain T4 cDNA library Length = 636 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 132 aagaagggagccaacgaagcgaccaagactctcaac 167 ||||||||||||||||| | |||||||| |||||| Sbjct: 188 aagaagggagccaacgagaccaccaagaccctcaac 223
>gb|AF129858.1|AF129858 Zea mays CENPCB protein (CenpcB) mRNA, partial cds Length = 1495 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 acaagcagctcaagaaggga 140 |||||||||||||||||||| Sbjct: 893 acaagcagctcaagaaggga 912
>gb|AC007291.24|AC007291 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR02I05, complete sequence Length = 176075 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 135 aagggagccaacgaagcgaccaagactctcaa 166 |||||||||||||| || |||||||| ||||| Sbjct: 120162 aagggagccaacgaggccaccaagaccctcaa 120131
>gb|BC019282.2| Homo sapiens NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone IMAGE:2823291), partial cds Length = 1408 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 92 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 151 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 152 tctgagttcatcgtgatggc 171
>gb|AF208396.1|AF208396 Drosophila melanogaster Hoi-polloi (hoip) mRNA, complete cds Length = 566 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 135 aagggagccaacgaagcgaccaagactctcaa 166 |||||||||||||| || |||||||| ||||| Sbjct: 191 aagggagccaacgaggccaccaagaccctcaa 222
>gb|AF175919.1|AF175919 Drosophila melanogaster hoip[k07104] P element insertion region Length = 394 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 135 aagggagccaacgaagcgaccaagactctcaa 166 |||||||||||||| || |||||||| ||||| Sbjct: 222 aagggagccaacgaggccaccaagaccctcaa 253
>gb|BT003523.1| Drosophila melanogaster RE22964 full insert cDNA Length = 3782 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 135 aagggagccaacgaagcgaccaagactctcaa 166 |||||||||||||| || |||||||| ||||| Sbjct: 207 aagggagccaacgaggccaccaagaccctcaa 238
>ref|XM_234480.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA A830059I20 (predicted) (LOC299265), mRNA Length = 1213 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 cgtggtgatggcagctgaca 204 |||||||||||||||||||| Sbjct: 327 cgtggtgatggcagctgaca 346
>emb|BX088652.6| Zebrafish DNA sequence from clone DKEY-256M19 in linkage group 1, complete sequence Length = 161341 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 gacacatgttttatgggcag 618 |||||||||||||||||||| Sbjct: 99179 gacacatgttttatgggcag 99198
>gb|AY893533.1| Synthetic construct Homo sapiens clone FLH130980.01X NHP2 non-histone chromosome protein 2-like 1 (NHP2L1) mRNA, complete cds Length = 387 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 91 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 150 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 151 tctgagttcatcgtgatggc 170
>emb|AL357614.5|HS367B10 Homo sapiens chromosome 9 BAC RP11-367B10, complete sequence Length = 182378 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 ttttcagctatattttgcaa 529 |||||||||||||||||||| Sbjct: 127125 ttttcagctatattttgcaa 127144
>gb|AF155235.1|AF155235 Homo sapiens 15.5 kD RNA binding protein mRNA, complete cds Length = 596 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 167 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 226 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 227 tctgagttcatcgtgatggc 246
>gb|AC007257.9|AC007257 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR24A22, complete sequence Length = 183007 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 135 aagggagccaacgaagcgaccaagactctcaa 166 |||||||||||||| || |||||||| ||||| Sbjct: 4015 aagggagccaacgaggccaccaagaccctcaa 3984
>emb|CR456531.1| Homo sapiens NHP2L1 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.NHP2L1) Length = 630 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 120 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 179 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 180 tctgagttcatcgtgatggc 199
>emb|AL110500.1|CEY87G2A Caenorhabditis elegans YAC Y87G2A, complete sequence Length = 123091 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 ccatcgagaagcttctcata 410 |||||||||||||||||||| Sbjct: 88197 ccatcgagaagcttctcata 88178
>gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34 of 83 of the complete sequence Length = 271507 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 135 aagggagccaacgaagcgaccaagactctcaa 166 |||||||||||||| || |||||||| ||||| Sbjct: 262690 aagggagccaacgaggccaccaagaccctcaa 262721
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 caaccccaaggcctacccgctggc 67 ||||||||||||||||| |||||| Sbjct: 1969058 caaccccaaggcctacctgctggc 1969035
>gb|AF091076.1|AF091076 Homo sapiens clone 557 OTK27 mRNA, complete cds Length = 554 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 106 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 165 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 166 tctgagttcatcgtgatggc 185
>gb|AY609481.1| Sus scrofa clone Clu_13005.scr.msk.p1.Contig3, mRNA sequence Length = 1436 Score = 40.1 bits (20), Expect = 8.7 Identities = 119/152 (78%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 |||||||||||||| || |||||||| || || ||||| || |||||||| || || Sbjct: 175 aactacaagcagcttcgaaaaggagccaatgaggccaccaaaaccctcaacagaggcatc 234 Query: 177 tcggagttcgtggtgatggcagctgacacggagccgctcgaaatcctcctccacctcccg 236 || |||||| | |||||||| || ||| ||||||| || || || |||| |||||||| Sbjct: 235 tctgagttcattgtgatggctgcagacgcggagcccctggagattatcctgcacctccca 294 Query: 237 ttgctcgcggaggacaagaatgtgccgtatgt 268 |||| ||||||||||| ||||| ||||| Sbjct: 295 ctgctgtgtgaggacaagaacgtgccctatgt 326
>gb|AC136008.5| Mus musculus BAC clone RP24-68J1 from 6, complete sequence Length = 181220 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 gtgcttgtggagtgactagg 317 |||||||||||||||||||| Sbjct: 141104 gtgcttgtggagtgactagg 141123
>gb|BC005358.1| Homo sapiens NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae), mRNA (cDNA clone MGC:12461 IMAGE:3681386), complete cds Length = 589 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 142 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 201 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 202 tctgagttcatcgtgatggc 221
>dbj|AP006388.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT39K18, TM0252d, complete sequence Length = 35261 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 180 gagttcgtggtgatggcagctgacacggagcc 211 |||||||| ||||||||||| ||||| ||||| Sbjct: 29088 gagttcgttgtgatggcagcagacactgagcc 29057
>dbj|AB036925.1| Citrus unshiu Cit-VATP B-1 gene for vacuolar H+-ATPase B subunit, partial cds Length = 2644 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 481 tggtgtcttgtctgctaggtcttt 504 ||||||||||||||| |||||||| Sbjct: 663 tggtgtcttgtctgccaggtcttt 686
>dbj|D50420.1| Homo sapiens mRNA for OTK27, complete cds Length = 1475 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 117 aactacaagcagctcaagaagggagccaacgaagcgaccaagactctcaacaggggaata 176 ||||| |||||||| ||| |||||||| || || ||||| || ||||||||||| || Sbjct: 185 aactataagcagcttcggaaaggagccaatgaggccaccaaaaccctcaacaggggcatc 244 Query: 177 tcggagttcgtggtgatggc 196 || |||||| | |||||||| Sbjct: 245 tctgagttcatcgtgatggc 264 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,352,837 Number of Sequences: 3902068 Number of extensions: 5352837 Number of successful extensions: 110732 Number of sequences better than 10.0: 188 Number of HSP's better than 10.0 without gapping: 178 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 109993 Number of HSP's gapped (non-prelim): 713 length of query: 637 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 614 effective length of database: 17,143,297,704 effective search space: 10525984790256 effective search space used: 10525984790256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)