| Clone Name | bags21m21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 143 bits (72), Expect = 8e-31 Identities = 276/344 (80%) Strand = Plus / Minus Query: 88 tcttcgagcagacgcacggcgagggcctgtggaagatggcccaccgcgacgccaccttcg 147 ||||| ||||| |||||||| | |||||||| || ||||| ||||||||| | |||| Sbjct: 104676 tcttcaagcaggcgcacggccggagcctgtgggagctggccggccgcgacgcggcgttcg 104617 Query: 148 acgcgctgatcaatgacgggatggtctcggacagccgcttcatcatggacatcgccgtca 207 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| || ||| | Sbjct: 104616 acgcgctcatcaacgacgggatggtctcggacagccgcgtcatcatggactacgtcgtga 104557 Query: 208 aggagtgcggcgaggtcttccaggggataacctcgttggtagacgtcggcggtggcctcg 267 |||| ||||||||| |||| |||||| |||| |||| ||| ||| ||| || |||| Sbjct: 104556 gggagcacggcgaggtgttccgggggatcgcctccctggtcgacctcgccggcgggctcg 104497 Query: 268 gcgcggcatctcaggcaatctccaaggcgttcccgcatctcgagtgcaccgtcatggatc 327 ||||||| | |||| ||||| |||||||||||| | | ||||| ||| ||||| | Sbjct: 104496 gcgcggcggcgcaggtcatctcgaaggcgttcccggaggtgaggtgcagcgtgatggacc 104437 Query: 328 tcggtcacgtcatcgccaatgctccaactggtactgacgtgaagttcgtcgccggcgaca 387 |||| |||||| ||||||| ||||| | || || ||||| ||| | |||||||||||| Sbjct: 104436 tcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcgagtacatcgccggcgaca 104377 Query: 388 tgttcgagagcgttccagcggcaaatgctgtgttcctaaaggta 431 |||| ||||| || ||| ||||| | ||||| ||||| |||||| Sbjct: 104376 tgtttgagagtgtgccaccggcagacgctgtcttcctcaaggta 104333 Score = 143 bits (72), Expect = 8e-31 Identities = 276/344 (80%) Strand = Plus / Plus Query: 88 tcttcgagcagacgcacggcgagggcctgtggaagatggcccaccgcgacgccaccttcg 147 ||||| ||||| |||||||| | |||||||| || ||||| ||||||||| | |||| Sbjct: 99285 tcttcaagcaggcgcacggccggagcctgtgggagctggccggccgcgacgcggcgttcg 99344 Query: 148 acgcgctgatcaatgacgggatggtctcggacagccgcttcatcatggacatcgccgtca 207 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| || ||| | Sbjct: 99345 acgcgctcatcaacgacgggatggtctcggacagccgcgtcatcatggactacgtcgtga 99404 Query: 208 aggagtgcggcgaggtcttccaggggataacctcgttggtagacgtcggcggtggcctcg 267 |||| ||||||||| |||| |||||| |||| |||| ||| ||| ||| || |||| Sbjct: 99405 gggagcacggcgaggtgttccgggggatcgcctccctggtcgacctcgccggcgggctcg 99464 Query: 268 gcgcggcatctcaggcaatctccaaggcgttcccgcatctcgagtgcaccgtcatggatc 327 ||||||| | |||| ||||| |||||||||||| | | ||||| ||| ||||| | Sbjct: 99465 gcgcggcggcgcaggtcatctcgaaggcgttcccggaggtgaggtgcagcgtgatggacc 99524 Query: 328 tcggtcacgtcatcgccaatgctccaactggtactgacgtgaagttcgtcgccggcgaca 387 |||| |||||| ||||||| ||||| | || || ||||| ||| | |||||||||||| Sbjct: 99525 tcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcgagtacatcgccggcgaca 99584 Query: 388 tgttcgagagcgttccagcggcaaatgctgtgttcctaaaggta 431 |||| ||||| || ||| ||||| | ||||| ||||| |||||| Sbjct: 99585 tgtttgagagtgtgccaccggcagacgctgtcttcctcaaggta 99628
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 143 bits (72), Expect = 8e-31 Identities = 276/344 (80%) Strand = Plus / Minus Query: 88 tcttcgagcagacgcacggcgagggcctgtggaagatggcccaccgcgacgccaccttcg 147 ||||| ||||| |||||||| | |||||||| || ||||| ||||||||| | |||| Sbjct: 10433 tcttcaagcaggcgcacggccggagcctgtgggagctggccggccgcgacgcggcgttcg 10374 Query: 148 acgcgctgatcaatgacgggatggtctcggacagccgcttcatcatggacatcgccgtca 207 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| || ||| | Sbjct: 10373 acgcgctcatcaacgacgggatggtctcggacagccgcgtcatcatggactacgtcgtga 10314 Query: 208 aggagtgcggcgaggtcttccaggggataacctcgttggtagacgtcggcggtggcctcg 267 |||| ||||||||| |||| |||||| |||| |||| ||| ||| ||| || |||| Sbjct: 10313 gggagcacggcgaggtgttccgggggatcgcctccctggtcgacctcgccggcgggctcg 10254 Query: 268 gcgcggcatctcaggcaatctccaaggcgttcccgcatctcgagtgcaccgtcatggatc 327 ||||||| | |||| ||||| |||||||||||| | | ||||| ||| ||||| | Sbjct: 10253 gcgcggcggcgcaggtcatctcgaaggcgttcccggaggtgaggtgcagcgtgatggacc 10194 Query: 328 tcggtcacgtcatcgccaatgctccaactggtactgacgtgaagttcgtcgccggcgaca 387 |||| |||||| ||||||| ||||| | || || ||||| ||| | |||||||||||| Sbjct: 10193 tcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcgagtacatcgccggcgaca 10134 Query: 388 tgttcgagagcgttccagcggcaaatgctgtgttcctaaaggta 431 |||| ||||| || ||| ||||| | ||||| ||||| |||||| Sbjct: 10133 tgtttgagagtgtgccaccggcagacgctgtcttcctcaaggta 10090 Score = 143 bits (72), Expect = 8e-31 Identities = 276/344 (80%) Strand = Plus / Plus Query: 88 tcttcgagcagacgcacggcgagggcctgtggaagatggcccaccgcgacgccaccttcg 147 ||||| ||||| |||||||| | |||||||| || ||||| ||||||||| | |||| Sbjct: 5042 tcttcaagcaggcgcacggccggagcctgtgggagctggccggccgcgacgcggcgttcg 5101 Query: 148 acgcgctgatcaatgacgggatggtctcggacagccgcttcatcatggacatcgccgtca 207 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| || ||| | Sbjct: 5102 acgcgctcatcaacgacgggatggtctcggacagccgcgtcatcatggactacgtcgtga 5161 Query: 208 aggagtgcggcgaggtcttccaggggataacctcgttggtagacgtcggcggtggcctcg 267 |||| ||||||||| |||| |||||| |||| |||| ||| ||| ||| || |||| Sbjct: 5162 gggagcacggcgaggtgttccgggggatcgcctccctggtcgacctcgccggcgggctcg 5221 Query: 268 gcgcggcatctcaggcaatctccaaggcgttcccgcatctcgagtgcaccgtcatggatc 327 ||||||| | |||| ||||| |||||||||||| | | ||||| ||| ||||| | Sbjct: 5222 gcgcggcggcgcaggtcatctcgaaggcgttcccggaggtgaggtgcagcgtgatggacc 5281 Query: 328 tcggtcacgtcatcgccaatgctccaactggtactgacgtgaagttcgtcgccggcgaca 387 |||| |||||| ||||||| ||||| | || || ||||| ||| | |||||||||||| Sbjct: 5282 tcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcgagtacatcgccggcgaca 5341 Query: 388 tgttcgagagcgttccagcggcaaatgctgtgttcctaaaggta 431 |||| ||||| || ||| ||||| | ||||| ||||| |||||| Sbjct: 5342 tgtttgagagtgtgccaccggcagacgctgtcttcctcaaggta 5385
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 143 bits (72), Expect = 8e-31 Identities = 276/344 (80%) Strand = Plus / Minus Query: 88 tcttcgagcagacgcacggcgagggcctgtggaagatggcccaccgcgacgccaccttcg 147 ||||| ||||| |||||||| | |||||||| || ||||| ||||||||| | |||| Sbjct: 25370072 tcttcaagcaggcgcacggccggagcctgtgggagctggccggccgcgacgcggcgttcg 25370013 Query: 148 acgcgctgatcaatgacgggatggtctcggacagccgcttcatcatggacatcgccgtca 207 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| || ||| | Sbjct: 25370012 acgcgctcatcaacgacgggatggtctcggacagccgcgtcatcatggactacgtcgtga 25369953 Query: 208 aggagtgcggcgaggtcttccaggggataacctcgttggtagacgtcggcggtggcctcg 267 |||| ||||||||| |||| |||||| |||| |||| ||| ||| ||| || |||| Sbjct: 25369952 gggagcacggcgaggtgttccgggggatcgcctccctggtcgacctcgccggcgggctcg 25369893 Query: 268 gcgcggcatctcaggcaatctccaaggcgttcccgcatctcgagtgcaccgtcatggatc 327 ||||||| | |||| ||||| |||||||||||| | | ||||| ||| ||||| | Sbjct: 25369892 gcgcggcggcgcaggtcatctcgaaggcgttcccggaggtgaggtgcagcgtgatggacc 25369833 Query: 328 tcggtcacgtcatcgccaatgctccaactggtactgacgtgaagttcgtcgccggcgaca 387 |||| |||||| ||||||| ||||| | || || ||||| ||| | |||||||||||| Sbjct: 25369832 tcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcgagtacatcgccggcgaca 25369773 Query: 388 tgttcgagagcgttccagcggcaaatgctgtgttcctaaaggta 431 |||| ||||| || ||| ||||| | ||||| ||||| |||||| Sbjct: 25369772 tgtttgagagtgtgccaccggcagacgctgtcttcctcaaggta 25369729 Score = 143 bits (72), Expect = 8e-31 Identities = 276/344 (80%) Strand = Plus / Plus Query: 88 tcttcgagcagacgcacggcgagggcctgtggaagatggcccaccgcgacgccaccttcg 147 ||||| ||||| |||||||| | |||||||| || ||||| ||||||||| | |||| Sbjct: 25364681 tcttcaagcaggcgcacggccggagcctgtgggagctggccggccgcgacgcggcgttcg 25364740 Query: 148 acgcgctgatcaatgacgggatggtctcggacagccgcttcatcatggacatcgccgtca 207 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| || ||| | Sbjct: 25364741 acgcgctcatcaacgacgggatggtctcggacagccgcgtcatcatggactacgtcgtga 25364800 Query: 208 aggagtgcggcgaggtcttccaggggataacctcgttggtagacgtcggcggtggcctcg 267 |||| ||||||||| |||| |||||| |||| |||| ||| ||| ||| || |||| Sbjct: 25364801 gggagcacggcgaggtgttccgggggatcgcctccctggtcgacctcgccggcgggctcg 25364860 Query: 268 gcgcggcatctcaggcaatctccaaggcgttcccgcatctcgagtgcaccgtcatggatc 327 ||||||| | |||| ||||| |||||||||||| | | ||||| ||| ||||| | Sbjct: 25364861 gcgcggcggcgcaggtcatctcgaaggcgttcccggaggtgaggtgcagcgtgatggacc 25364920 Query: 328 tcggtcacgtcatcgccaatgctccaactggtactgacgtgaagttcgtcgccggcgaca 387 |||| |||||| ||||||| ||||| | || || ||||| ||| | |||||||||||| Sbjct: 25364921 tcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcgagtacatcgccggcgaca 25364980 Query: 388 tgttcgagagcgttccagcggcaaatgctgtgttcctaaaggta 431 |||| ||||| || ||| ||||| | ||||| ||||| |||||| Sbjct: 25364981 tgtttgagagtgtgccaccggcagacgctgtcttcctcaaggta 25365024 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cgtcggcggtggcctcggcg 270 |||||||||||||||||||| Sbjct: 4568389 cgtcggcggtggcctcggcg 4568408
>dbj|AK068905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G03, full insert sequence Length = 1357 Score = 137 bits (69), Expect = 5e-29 Identities = 270/337 (80%) Strand = Plus / Plus Query: 88 tcttcgagcagacgcacggcgagggcctgtggaagatggcccaccgcgacgccaccttcg 147 ||||| ||||| |||||||| | |||||||| || ||||| ||||||||| | |||| Sbjct: 478 tcttcaagcaggcgcacggccggagcctgtgggagctggccggccgcgacgcggcgttcg 537 Query: 148 acgcgctgatcaatgacgggatggtctcggacagccgcttcatcatggacatcgccgtca 207 ||||||| ||||| |||||||||||||||||||||||| ||||||||||| || ||| | Sbjct: 538 acgcgctcatcaacgacgggatggtctcggacagccgcgtcatcatggactacgtcgtga 597 Query: 208 aggagtgcggcgaggtcttccaggggataacctcgttggtagacgtcggcggtggcctcg 267 |||| ||||||||| |||| |||||| |||| |||| ||| ||| ||| || |||| Sbjct: 598 gggagcacggcgaggtgttccgggggatcgcctccctggtcgacctcgccggcgggctcg 657 Query: 268 gcgcggcatctcaggcaatctccaaggcgttcccgcatctcgagtgcaccgtcatggatc 327 ||||||| | |||| ||||| |||||||||||| | | ||||| ||| ||||| | Sbjct: 658 gcgcggcggcgcaggtcatctcgaaggcgttcccggaggtgaggtgcagcgtgatggacc 717 Query: 328 tcggtcacgtcatcgccaatgctccaactggtactgacgtgaagttcgtcgccggcgaca 387 |||| |||||| ||||||| ||||| | || || ||||| ||| | |||||||||||| Sbjct: 718 tcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcgagtacatcgccggcgaca 777 Query: 388 tgttcgagagcgttccagcggcaaatgctgtgttcct 424 |||| ||||| || ||| ||||| | ||||| ||||| Sbjct: 778 tgtttgagagtgtgccaccggcagacgctgtcttcct 814
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 101 bits (51), Expect = 3e-18 Identities = 219/275 (79%) Strand = Plus / Minus Query: 157 tcaatgacgggatggtctcggacagccgcttcatcatggacatcgccgtcaaggagtgcg 216 |||| |||| ||||||||| ||||||||| | | |||||| ||| ||||| |||| || Sbjct: 14760262 tcaacgacgcgatggtctccgacagccgcctggtgatggacgtcgtcgtcagggagcacg 14760203 Query: 217 gcgaggtcttccaggggataacctcgttggtagacgtcggcggtggcctcggcgcggcat 276 |||| || |||| | |||| | |||| |||| ||||||| ||| |||| |||| |||| Sbjct: 14760202 gcgatgtgttccggaggatcagctcgctggtggacgtcgccgggggccacggcacggcgg 14760143 Query: 277 ctcaggcaatctccaaggcgttcccgcatctcgagtgcaccgtcatggatctcggtcacg 336 | ||||| ||| ||| |||||||||| | | |||||| ||| ||||| |||| |||| Sbjct: 14760142 cgcaggccatcgccagggcgttcccggaggtgaagtgcagcgtgatggacctcgcccacg 14760083 Query: 337 tcatcgccaatgctccaactggtactgacgtgaagttcgtcgccggcgacatgttcgaga 396 || ||||||| ||||| ||| || | |||| ||| | ||||||||||||||||||||| Sbjct: 14760082 tcgtcgccaaggctcccggtggcaccggcgtggagtacatcgccggcgacatgttcgaga 14760023 Query: 397 gcgttccagcggcaaatgctgtgttcctaaaggta 431 || ||||| ||||||| ||||| ||||| |||||| Sbjct: 14760022 gcattccaccggcaaacgctgtcttcctcaaggta 14759988 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 365 cgtgaagttcgtcgccggcgacatgttcgagagcgttccagcggcaaatgctgtgttcct 424 |||| ||| ||||||||||||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 15051257 cgtggagtacgtcgccggcgacatgttcgagagcgtcccaccggcaaacgctgtcttcct 15051316 Query: 425 aaaggta 431 |||||| Sbjct: 15051317 caaggta 15051323 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 157 tcaatgacgggatggtctcggacagccgcttcatcatggacatcgccgtcaaggagtgcg 216 |||| |||||||||| ||||||||| |||||| ||||||||| |||| |||| || Sbjct: 14796021 tcaacgacgggatggcgtcggacagcgccttcatgatggacatcctggtcagggagcacg 14795962 Query: 217 gcgaggtcttccaggggataacctcgttggtagacgtcg 255 ||||||| ||||||||||| | |||| |||| ||||||| Sbjct: 14795961 gcgaggtgttccaggggatcagctcgctggtcgacgtcg 14795923 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 370 agttcgtcgccggcgacatgttcgagagcgttccagcggcaaatgctgtgttcctaaagg 429 ||||| || ||||||||||||| ||||| |||||| ||||||| ||||| ||||| |||| Sbjct: 15020055 agttcatcaccggcgacatgtttgagagtgttccaccggcaaacgctgtcttcctcaagg 15020114 Query: 430 ta 431 || Sbjct: 15020115 ta 15020116 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 370 agttcgtcgccggcgacatgttcgagagcgttccagcggcaaatgctgtgttcctaaagg 429 ||||| |||||||||||||||| || || ||||||| || |||||||| ||||| |||| Sbjct: 14795808 agttcatcgccggcgacatgtttgacagtattccagcagccaatgctgtcttcctcaagg 14795749 Query: 430 tac 432 ||| Sbjct: 14795748 tac 14795746 Score = 44.1 bits (22), Expect = 0.58 Identities = 49/58 (84%) Strand = Plus / Plus Query: 166 ggatggtctcggacagccgcttcatcatggacatcgccgtcaaggagtgcggcgaggt 223 |||||||||| ||||||||||| | |||||| ||| ||||| |||| ||||||||| Sbjct: 15051052 ggatggtctccgacagccgcttggtgatggacgtcgtcgtcagggagcacggcgaggt 15051109 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 31 tcaccccgttcctcgggatcggcgactgg 59 ||||||| |||||| |||||||||||||| Sbjct: 14760388 tcacccccttcctccggatcggcgactgg 14760360 Score = 40.1 bits (20), Expect = 9.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 216 ggcgaggtcttccaggggataacctcgttggtagacgtcg 255 |||||||| ||||||||||| | |||| |||| ||||||| Sbjct: 15019901 ggcgaggtgttccaggggatcagctcgctggtcgacgtcg 15019940
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 101 bits (51), Expect = 3e-18 Identities = 219/275 (79%) Strand = Plus / Minus Query: 157 tcaatgacgggatggtctcggacagccgcttcatcatggacatcgccgtcaaggagtgcg 216 |||| |||| ||||||||| ||||||||| | | |||||| ||| ||||| |||| || Sbjct: 14714545 tcaacgacgcgatggtctccgacagccgcctggtgatggacgtcgtcgtcagggagcacg 14714486 Query: 217 gcgaggtcttccaggggataacctcgttggtagacgtcggcggtggcctcggcgcggcat 276 |||| || |||| | |||| | |||| |||| ||||||| ||| |||| |||| |||| Sbjct: 14714485 gcgatgtgttccggaggatcagctcgctggtggacgtcgccgggggccacggcacggcgg 14714426 Query: 277 ctcaggcaatctccaaggcgttcccgcatctcgagtgcaccgtcatggatctcggtcacg 336 | ||||| ||| ||| |||||||||| | | |||||| ||| ||||| |||| |||| Sbjct: 14714425 cgcaggccatcgccagggcgttcccggaggtgaagtgcagcgtgatggacctcgcccacg 14714366 Query: 337 tcatcgccaatgctccaactggtactgacgtgaagttcgtcgccggcgacatgttcgaga 396 || ||||||| ||||| ||| || | |||| ||| | ||||||||||||||||||||| Sbjct: 14714365 tcgtcgccaaggctcccggtggcaccggcgtggagtacatcgccggcgacatgttcgaga 14714306 Query: 397 gcgttccagcggcaaatgctgtgttcctaaaggta 431 || ||||| ||||||| ||||| ||||| |||||| Sbjct: 14714305 gcattccaccggcaaacgctgtcttcctcaaggta 14714271 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 365 cgtgaagttcgtcgccggcgacatgttcgagagcgttccagcggcaaatgctgtgttcct 424 |||| ||| ||||||||||||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 15005540 cgtggagtacgtcgccggcgacatgttcgagagcgtcccaccggcaaacgctgtcttcct 15005599 Query: 425 aaaggta 431 |||||| Sbjct: 15005600 caaggta 15005606 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 157 tcaatgacgggatggtctcggacagccgcttcatcatggacatcgccgtcaaggagtgcg 216 |||| |||||||||| ||||||||| |||||| ||||||||| |||| |||| || Sbjct: 14750304 tcaacgacgggatggcgtcggacagcgccttcatgatggacatcctggtcagggagcacg 14750245 Query: 217 gcgaggtcttccaggggataacctcgttggtagacgtcg 255 ||||||| ||||||||||| | |||| |||| ||||||| Sbjct: 14750244 gcgaggtgttccaggggatcagctcgctggtcgacgtcg 14750206 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 370 agttcgtcgccggcgacatgttcgagagcgttccagcggcaaatgctgtgttcctaaagg 429 ||||| || ||||||||||||| ||||| |||||| ||||||| ||||| ||||| |||| Sbjct: 14974338 agttcatcaccggcgacatgtttgagagtgttccaccggcaaacgctgtcttcctcaagg 14974397 Query: 430 ta 431 || Sbjct: 14974398 ta 14974399 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 370 agttcgtcgccggcgacatgttcgagagcgttccagcggcaaatgctgtgttcctaaagg 429 ||||| |||||||||||||||| || || ||||||| || |||||||| ||||| |||| Sbjct: 14750091 agttcatcgccggcgacatgtttgacagtattccagcagccaatgctgtcttcctcaagg 14750032 Query: 430 tac 432 ||| Sbjct: 14750031 tac 14750029 Score = 44.1 bits (22), Expect = 0.58 Identities = 49/58 (84%) Strand = Plus / Plus Query: 166 ggatggtctcggacagccgcttcatcatggacatcgccgtcaaggagtgcggcgaggt 223 |||||||||| ||||||||||| | |||||| ||| ||||| |||| ||||||||| Sbjct: 15005335 ggatggtctccgacagccgcttggtgatggacgtcgtcgtcagggagcacggcgaggt 15005392 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 31 tcaccccgttcctcgggatcggcgactgg 59 ||||||| |||||| |||||||||||||| Sbjct: 14714671 tcacccccttcctccggatcggcgactgg 14714643 Score = 40.1 bits (20), Expect = 9.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 216 ggcgaggtcttccaggggataacctcgttggtagacgtcg 255 |||||||| ||||||||||| | |||| |||| ||||||| Sbjct: 14974184 ggcgaggtgttccaggggatcagctcgctggtcgacgtcg 14974223
>emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa0037B01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133207 Score = 101 bits (51), Expect = 3e-18 Identities = 219/275 (79%) Strand = Plus / Plus Query: 157 tcaatgacgggatggtctcggacagccgcttcatcatggacatcgccgtcaaggagtgcg 216 |||| |||| ||||||||| ||||||||| | | |||||| ||| ||||| |||| || Sbjct: 58538 tcaacgacgcgatggtctccgacagccgcctggtgatggacgtcgtcgtcagggagcacg 58597 Query: 217 gcgaggtcttccaggggataacctcgttggtagacgtcggcggtggcctcggcgcggcat 276 |||| || |||| | |||| | |||| |||| ||||||| ||| |||| |||| |||| Sbjct: 58598 gcgatgtgttccggaggatcagctcgctggtggacgtcgccgggggccacggcacggcgg 58657 Query: 277 ctcaggcaatctccaaggcgttcccgcatctcgagtgcaccgtcatggatctcggtcacg 336 | ||||| ||| ||| |||||||||| | | |||||| ||| ||||| |||| |||| Sbjct: 58658 cgcaggccatcgccagggcgttcccggaggtgaagtgcagcgtgatggacctcgcccacg 58717 Query: 337 tcatcgccaatgctccaactggtactgacgtgaagttcgtcgccggcgacatgttcgaga 396 || ||||||| ||||| ||| || | |||| ||| | ||||||||||||||||||||| Sbjct: 58718 tcgtcgccaaggctcccggtggcaccggcgtggagtacatcgccggcgacatgttcgaga 58777 Query: 397 gcgttccagcggcaaatgctgtgttcctaaaggta 431 || ||||| ||||||| ||||| ||||| |||||| Sbjct: 58778 gcattccaccggcaaacgctgtcttcctcaaggta 58812 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 157 tcaatgacgggatggtctcggacagccgcttcatcatggacatcgccgtcaaggagtgcg 216 |||| |||||||||| ||||||||| |||||| ||||||||| |||| |||| || Sbjct: 22779 tcaacgacgggatggcgtcggacagcgccttcatgatggacatcctggtcagggagcacg 22838 Query: 217 gcgaggtcttccaggggataacctcgttggtagacgtcg 255 ||||||| ||||||||||| | |||| |||| ||||||| Sbjct: 22839 gcgaggtgttccaggggatcagctcgctggtcgacgtcg 22877 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 370 agttcgtcgccggcgacatgttcgagagcgttccagcggcaaatgctgtgttcctaaagg 429 ||||| |||||||||||||||| || || ||||||| || |||||||| ||||| |||| Sbjct: 22992 agttcatcgccggcgacatgtttgacagtattccagcagccaatgctgtcttcctcaagg 23051 Query: 430 tac 432 ||| Sbjct: 23052 tac 23054 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 31 tcaccccgttcctcgggatcggcgactgg 59 ||||||| |||||| |||||||||||||| Sbjct: 58412 tcacccccttcctccggatcggcgactgg 58440
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 365 cgtgaagttcgtcgccggcgacatgttcgagagcgttccagcggcaaatgctgtgttcct 424 |||| ||| ||||||||||||||||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 30590 cgtggagtacgtcgccggcgacatgttcgagagcgtcccaccggcaaacgctgtcttcct 30531 Query: 425 aaaggta 431 |||||| Sbjct: 30530 caaggta 30524 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 370 agttcgtcgccggcgacatgttcgagagcgttccagcggcaaatgctgtgttcctaaagg 429 ||||| || ||||||||||||| ||||| |||||| ||||||| ||||| ||||| |||| Sbjct: 61792 agttcatcaccggcgacatgtttgagagtgttccaccggcaaacgctgtcttcctcaagg 61733 Query: 430 ta 431 || Sbjct: 61732 ta 61731 Score = 44.1 bits (22), Expect = 0.58 Identities = 49/58 (84%) Strand = Plus / Minus Query: 166 ggatggtctcggacagccgcttcatcatggacatcgccgtcaaggagtgcggcgaggt 223 |||||||||| ||||||||||| | |||||| ||| ||||| |||| ||||||||| Sbjct: 30795 ggatggtctccgacagccgcttggtgatggacgtcgtcgtcagggagcacggcgaggt 30738 Score = 40.1 bits (20), Expect = 9.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 216 ggcgaggtcttccaggggataacctcgttggtagacgtcg 255 |||||||| ||||||||||| | |||| |||| ||||||| Sbjct: 61946 ggcgaggtgttccaggggatcagctcgctggtcgacgtcg 61907
>emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa0041M09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146519 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 157 tcaatgacgggatggtctcggacagccgcttcatcatggacatcgccgtcaaggagtgcg 216 |||| |||||||||| ||||||||| |||||| ||||||||| |||| |||| || Sbjct: 123865 tcaacgacgggatggcgtcggacagcgccttcatgatggacatcctggtcagggagcacg 123924 Query: 217 gcgaggtcttccaggggataacctcgttggtagacgtcg 255 ||||||| ||||||||||| | |||| |||| ||||||| Sbjct: 123925 gcgaggtgttccaggggatcagctcgctggtcgacgtcg 123963 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 370 agttcgtcgccggcgacatgttcgagagcgttccagcggcaaatgctgtgttcctaaagg 429 ||||| |||||||||||||||| || || ||||||| || |||||||| ||||| |||| Sbjct: 124078 agttcatcgccggcgacatgtttgacagtattccagcagccaatgctgtcttcctcaagg 124137 Query: 430 tac 432 ||| Sbjct: 124138 tac 124140
>gb|L14063.1|MZEOMT Zea mays O-methyltransferase mRNA, complete cds Length = 1268 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 219 gaggtcttccaggggataacctcgttggtagacgtcggcggtggcctcggcgcggcatct 278 ||||||||||||||||||| |||| | || |||||||| || ||| |||| ||||| | Sbjct: 606 gaggtcttccaggggataagctcgctcgtcgacgtcggtgggggcatcggtgcggcggcc 665 Query: 279 caggcaatctccaaggcgttcccgca 304 || || ||||| |||||||||||||| Sbjct: 666 caagccatctcaaaggcgttcccgca 691
>gb|AY107933.1| Zea mays PCO142167 mRNA sequence Length = 710 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 365 cgtgaagttcgtcgccggcgacatgttcgagagcgtt 401 |||||||| |||||||| |||||||||||||||||| Sbjct: 223 cgtgaagtatgtcgccggtgacatgttcgagagcgtt 259 Score = 40.1 bits (20), Expect = 9.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 175 cggacagccgcttcatcatggacatcgccgtcaaggagtgcggc 218 |||||||| ||||||||||| || ||| |||| |||||||||| Sbjct: 27 cggacagcggcttcatcatgaacgtcgtggtcagggagtgcggc 70
>emb|AJ584611.1| Methylocystis sp. SC2 Particulate Methane Monooxygenase operon, strain SC2 Length = 4444 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 368 gaagttcgtcgccggcgacatg 389 |||||||||||||||||||||| Sbjct: 4123 gaagttcgtcgccggcgacatg 4144
>gb|U81596.2|MSU81596 Methylocystis sp. M particulate methane monooxygenase operon, complete sequence Length = 5050 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 368 gaagttcgtcgccggcgacatg 389 |||||||||||||||||||||| Sbjct: 4075 gaagttcgtcgccggcgacatg 4096
>gb|U31650.2|MTU31650 Methylosinus trichosporium particulate methane monooxygenase operon, complete sequence; and unknown gene Length = 4548 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 368 gaagttcgtcgccggcgacatg 389 |||||||||||||||||||||| Sbjct: 3716 gaagttcgtcgccggcgacatg 3737
>gb|AY110291.1| Zea mays CL2555_1 mRNA sequence Length = 1319 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 219 gaggtcttccaggggataacctcgttggtagacgtcgg 256 ||||||||||||||||||| |||| | || |||||||| Sbjct: 606 gaggtcttccaggggataagctcgctcgtcgacgtcgg 643
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 gacgtgaagttcgtcgccggc 383 ||||||||||||||||||||| Sbjct: 1231755 gacgtgaagttcgtcgccggc 1231735
>ref|NM_191262.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 370 agttcgtcgccggcgacatgttcga 394 ||||||||||||| ||||||||||| Sbjct: 767 agttcgtcgccggggacatgttcga 791
>gb|DQ286966.1| Salmonella paratyphi cytolysin A (clyA) gene, complete cds Length = 1366 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 aggtcttccaggggataacct 240 ||||||||||||||||||||| Sbjct: 346 aggtcttccaggggataacct 326
>emb|AJ313033.1|SEN313033 Salmonella paratyphi clyA gene for cytolysin A Length = 1102 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 aggtcttccaggggataacct 240 ||||||||||||||||||||| Sbjct: 192 aggtcttccaggggataacct 172
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 gttcgtcgccggcgacatgtt 391 ||||||||||||||||||||| Sbjct: 9844722 gttcgtcgccggcgacatgtt 9844702 Score = 40.1 bits (20), Expect = 9.1 Identities = 62/76 (81%) Strand = Plus / Minus Query: 184 gcttcatcatggacatcgccgtcaaggagtgcggcgaggtcttccaggggataacctcgt 243 ||||| ||||||||||||| || | |||| ||||||| || |||| ||| | | |||| Sbjct: 7317792 gcttcgtcatggacatcgcggtgagggagggcggcgacgtgttccgcgggctcagctcgc 7317733 Query: 244 tggtagacgtcggcgg 259 |||| ||||||||||| Sbjct: 7317732 tggtcgacgtcggcgg 7317717
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 370 agttcgtcgccggcgacatgttcga 394 ||||||||||||| ||||||||||| Sbjct: 31604762 agttcgtcgccggggacatgttcga 31604786
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 370 agttcgtcgccggcgacatgttcga 394 ||||||||||||| ||||||||||| Sbjct: 18494 agttcgtcgccggggacatgttcga 18518
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 370 agttcgtcgccggcgacatgttcga 394 ||||||||||||| ||||||||||| Sbjct: 117785 agttcgtcgccggggacatgttcga 117809
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 aggtcttccaggggataacct 240 ||||||||||||||||||||| Sbjct: 1386902 aggtcttccaggggataacct 1386922
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 gttcgtcgccggcgacatgtt 391 ||||||||||||||||||||| Sbjct: 134964 gttcgtcgccggcgacatgtt 134944
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 gttcgtcgccggcgacatgtt 391 ||||||||||||||||||||| Sbjct: 41357 gttcgtcgccggcgacatgtt 41337
>emb|AL672190.14| Mouse DNA sequence from clone RP23-150G4 on chromosome X, complete sequence Length = 198693 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cacaagaaaagaataaaatat 639 ||||||||||||||||||||| Sbjct: 195863 cacaagaaaagaataaaatat 195843
>ref|NM_196707.1| Oryza sativa (japonica cultivar-group) putative serine/threonine kinase (OSJNBa0046P18.16), mRNA Length = 1338 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cgtcggcggtggcctcggcg 270 |||||||||||||||||||| Sbjct: 65 cgtcggcggtggcctcggcg 84
>ref|NM_194125.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1905 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 agttcgtcgccggcgacatg 389 |||||||||||||||||||| Sbjct: 1538 agttcgtcgccggcgacatg 1557
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cgtcggcggtggcctcggcg 270 |||||||||||||||||||| Sbjct: 78856 cgtcggcggtggcctcggcg 78875
>gb|AF189005.5| Homo sapiens chromosome 8 clone CTA-396D5 map q12.1, complete sequence Length = 120719 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 cacaagaaaagaataaaata 638 |||||||||||||||||||| Sbjct: 96278 cacaagaaaagaataaaata 96259
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tcgtcgccggcgacatgttc 392 |||||||||||||||||||| Sbjct: 133629 tcgtcgccggcgacatgttc 133610
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tcgtcgccggcgacatgttc 392 |||||||||||||||||||| Sbjct: 33249 tcgtcgccggcgacatgttc 33230
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ttcatcatggacatcgccgt 205 |||||||||||||||||||| Sbjct: 540655 ttcatcatggacatcgccgt 540636
>gb|AC133602.3| Mus musculus BAC clone RP24-255I9 from chromosome 15, complete sequence Length = 155411 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gagggcctgtggaagatggc 127 |||||||||||||||||||| Sbjct: 90147 gagggcctgtggaagatggc 90128
>gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome 16, complete sequence Length = 186848 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 623 agaaaagaataaaatattac 642 |||||||||||||||||||| Sbjct: 171009 agaaaagaataaaatattac 170990
>gb|AC124538.4| Mus musculus BAC clone RP23-338P10 from chromosome 1, complete sequence Length = 181512 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gagggcctgtggaagatggc 127 |||||||||||||||||||| Sbjct: 73833 gagggcctgtggaagatggc 73852
>gb|BC006574.2| Homo sapiens cDNA clone IMAGE:3537327, partial cds Length = 3381 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 agccagacccgagcctcttc 92 |||||||||||||||||||| Sbjct: 300 agccagacccgagcctcttc 281
>gb|BC013950.2| Homo sapiens cDNA clone IMAGE:2821626, partial cds Length = 3435 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 agccagacccgagcctcttc 92 |||||||||||||||||||| Sbjct: 300 agccagacccgagcctcttc 281
>emb|AL590235.23| Human DNA sequence from clone RP11-529E10 on chromosome 4, complete sequence Length = 159246 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 agccagacccgagcctcttc 92 |||||||||||||||||||| Sbjct: 59909 agccagacccgagcctcttc 59890
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cgccaccttcgacgcgctga 156 |||||||||||||||||||| Sbjct: 3518334 cgccaccttcgacgcgctga 3518315
>emb|AL121796.17|HSDJ368B9 Human DNA sequence from clone RP3-368B9 on chromosome 4, complete sequence Length = 133066 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 agccagacccgagcctcttc 92 |||||||||||||||||||| Sbjct: 128595 agccagacccgagcctcttc 128576
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cgccaccttcgacgcgctga 156 |||||||||||||||||||| Sbjct: 161108 cgccaccttcgacgcgctga 161089
>emb|CR381598.5| Zebrafish DNA sequence from clone CH211-263K4 in linkage group 8, complete sequence Length = 146900 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 622 aagaaaagaataaaatattacttc 645 |||||||||| ||||||||||||| Sbjct: 12527 aagaaaagaaaaaaatattacttc 12504
>gb|AC151734.3| Mus musculus BAC clone RP23-22O15 from chromosome 15, complete sequence Length = 229862 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gagggcctgtggaagatggc 127 |||||||||||||||||||| Sbjct: 49192 gagggcctgtggaagatggc 49173
>gb|AC110013.5| Homo sapiens chromosome 8, clone CTA-396D5, complete sequence Length = 120724 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 cacaagaaaagaataaaata 638 |||||||||||||||||||| Sbjct: 24443 cacaagaaaagaataaaata 24462
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 gtcggcggtggcctcggcgc 271 |||||||||||||||||||| Sbjct: 1540450 gtcggcggtggcctcggcgc 1540431
>gb|AC005312.3| Arabidopsis thaliana chromosome 2 clone T16F16 map CIC11A04, complete sequence Length = 74903 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 618 tcacaagaaaagaataaaat 637 |||||||||||||||||||| Sbjct: 42699 tcacaagaaaagaataaaat 42680
>gb|AC084373.24| Homo sapiens 12q BAC RP11-421H10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184876 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 622 aagaaaagaataaaatatta 641 |||||||||||||||||||| Sbjct: 42879 aagaaaagaataaaatatta 42860
>gb|AC073613.16| Homo sapiens Xp BAC RP11-797I1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 137432 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 agaaaagaataaaatattac 642 |||||||||||||||||||| Sbjct: 86051 agaaaagaataaaatattac 86070
>gb|AC067982.6| Homo sapiens chromosome 8, clone RP11-125E23, complete sequence Length = 147875 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 agaaaagaataaaatattac 642 |||||||||||||||||||| Sbjct: 145938 agaaaagaataaaatattac 145957
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgccaccttcgacgcgctga 156 |||||||||||||||||||| Sbjct: 1307128 cgccaccttcgacgcgctga 1307147
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tcgtcgccggcgacatgttc 392 |||||||||||||||||||| Sbjct: 19030431 tcgtcgccggcgacatgttc 19030412
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgtcggcggtggcctcggcg 270 |||||||||||||||||||| Sbjct: 15409048 cgtcggcggtggcctcggcg 15409029
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 cgacgcgctgatcaatgacg 165 |||||||||||||||||||| Sbjct: 14634340 cgacgcgctgatcaatgacg 14634321 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 agttcgtcgccggcgacatg 389 |||||||||||||||||||| Sbjct: 743468 agttcgtcgccggcgacatg 743487
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgtcggcggtggcctcggcg 270 |||||||||||||||||||| Sbjct: 12737615 cgtcggcggtggcctcggcg 12737596
>gb|AC025828.3|AC025828 Homo sapiens, clone RP11-13I24, complete sequence Length = 152843 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 agaaaagaataaaatattac 642 |||||||||||||||||||| Sbjct: 46935 agaaaagaataaaatattac 46954
>gb|AC010917.16|AC010917 Drosophila melanogaster, chromosome X, region 19E-19E, BAC clone BACR28L06, complete sequence Length = 174820 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 cacaagaaaagaataaaata 638 |||||||||||||||||||| Sbjct: 130140 cacaagaaaagaataaaata 130159
>gb|AC011706.14|AC011706 Drosophila melanogaster, chromosome X, region 19E-19E, BAC clone BACR03J18, complete sequence Length = 161614 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 cacaagaaaagaataaaata 638 |||||||||||||||||||| Sbjct: 87011 cacaagaaaagaataaaata 87030
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgtcggcggtggcctcggcg 270 |||||||||||||||||||| Sbjct: 126411 cgtcggcggtggcctcggcg 126392
>gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosome 16, complete sequence Length = 227632 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 agaaaagaataaaatattac 642 |||||||||||||||||||| Sbjct: 15840 agaaaagaataaaatattac 15859
>gb|AC007272.3| Homo sapiens BAC clone RP11-13J8 from 2, complete sequence Length = 95073 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 gctgtaccattactattttt 563 |||||||||||||||||||| Sbjct: 30991 gctgtaccattactattttt 30972
>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_G09 Length = 115815 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 agttcgtcgccggcgacatg 389 |||||||||||||||||||| Sbjct: 81999 agttcgtcgccggcgacatg 82018
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tcaccccgttcctcgggatc 50 |||||||||||||||||||| Sbjct: 1719309 tcaccccgttcctcgggatc 1719328
>dbj|AP004862.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B11 Length = 166004 Score = 40.1 bits (20), Expect = 9.1 Identities = 62/76 (81%) Strand = Plus / Minus Query: 184 gcttcatcatggacatcgccgtcaaggagtgcggcgaggtcttccaggggataacctcgt 243 ||||| ||||||||||||| || | |||| ||||||| || |||| ||| | | |||| Sbjct: 24377 gcttcgtcatggacatcgcggtgagggagggcggcgacgtgttccgcgggctcagctcgc 24318 Query: 244 tggtagacgtcggcgg 259 |||| ||||||||||| Sbjct: 24317 tggtcgacgtcggcgg 24302
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 40.1 bits (20), Expect = 9.1 Identities = 62/76 (81%) Strand = Plus / Minus Query: 184 gcttcatcatggacatcgccgtcaaggagtgcggcgaggtcttccaggggataacctcgt 243 ||||| ||||||||||||| || | |||| ||||||| || |||| ||| | | |||| Sbjct: 152796 gcttcgtcatggacatcgcggtgagggagggcggcgacgtgttccgcgggctcagctcgc 152737 Query: 244 tggtagacgtcggcgg 259 |||| ||||||||||| Sbjct: 152736 tggtcgacgtcggcgg 152721
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 agttcgtcgccggcgacatg 389 |||||||||||||||||||| Sbjct: 63275 agttcgtcgccggcgacatg 63294
>dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0026I22 Length = 143302 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 cgacgcgctgatcaatgacg 165 |||||||||||||||||||| Sbjct: 27338 cgacgcgctgatcaatgacg 27319
>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0086N11 Length = 146185 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgtcggcggtggcctcggcg 270 |||||||||||||||||||| Sbjct: 85892 cgtcggcggtggcctcggcg 85873
>dbj|AK121550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033A09, full insert sequence Length = 3695 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgtcggcggtggcctcggcg 270 |||||||||||||||||||| Sbjct: 3026 cgtcggcggtggcctcggcg 3007
>dbj|AK066106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052M01, full insert sequence Length = 4119 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgtcggcggtggcctcggcg 270 |||||||||||||||||||| Sbjct: 3539 cgtcggcggtggcctcggcg 3520
>emb|CT010584.19| Mouse DNA sequence from clone RP23-383B20 on chromosome 16, complete sequence Length = 199010 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 623 agaaaagaataaaatattac 642 |||||||||||||||||||| Sbjct: 114097 agaaaagaataaaatattac 114078
>gb|AF147749.1|AF147749 Streptomyces griseus dnaK pseudogene, complete sequence; putative antibiotic production activating factor gene, complete cds; and unknown gene Length = 4308 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 199 tcgccgtcaaggagtgcggcgaggtctt 226 ||||||||| |||| ||||||||||||| Sbjct: 253 tcgccgtcatggagggcggcgaggtctt 280
>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the complete sequence Length = 300051 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 cacaagaaaagaataaaata 638 |||||||||||||||||||| Sbjct: 191376 cacaagaaaagaataaaata 191395
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cgtcggcggtggcctcggcg 270 |||||||||||||||||||| Sbjct: 1073320 cgtcggcggtggcctcggcg 1073339
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgtcggcggtggcctcggcg 270 |||||||||||||||||||| Sbjct: 15417289 cgtcggcggtggcctcggcg 15417270
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tcgtcgccggcgacatgttc 392 |||||||||||||||||||| Sbjct: 19189080 tcgtcgccggcgacatgttc 19189061
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 9.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 622 aagaaaagaataaaatattacttcctcc 649 |||||||||||||||| ||||||||||| Sbjct: 4021506 aagaaaagaataaaat-ttacttcctcc 4021480
>emb|CT025838.2| Medicago truncatula chromosome 5 clone mth2-124f10, COMPLETE SEQUENCE Length = 113309 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 615 taatcacaagaaaagaataaaata 638 ||||||||| |||||||||||||| Sbjct: 59764 taatcacaacaaaagaataaaata 59787
>gb|U65749.1|DMU65749 Drosophila mettleri NADPH-cytochrome P450 reductase (cpr) mRNA, complete cds Length = 2773 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgttcctcgggatcggcgac 56 |||||||||||||||||||| Sbjct: 777 cgttcctcgggatcggcgac 758
>emb|Z69710.1|HSL98A6B Human DNA sequence from clone LA04NC01-98A6 on chromosome 4, complete sequence Length = 29156 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 agccagacccgagcctcttc 92 |||||||||||||||||||| Sbjct: 2714 agccagacccgagcctcttc 2733 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,610,016 Number of Sequences: 3902068 Number of extensions: 4610016 Number of successful extensions: 113468 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 111993 Number of HSP's gapped (non-prelim): 1477 length of query: 665 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 642 effective length of database: 17,143,297,704 effective search space: 11005997125968 effective search space used: 11005997125968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)