ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags22b16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105004.1| Zea mays PCO112876 mRNA sequence 507 e-140
2dbj|AK104231.1| Oryza sativa (japonica cultivar-group) cDNA clon... 492 e-136
3dbj|AK059904.1| Oryza sativa (japonica cultivar-group) cDNA clon... 492 e-136
4dbj|AK068821.1| Oryza sativa (japonica cultivar-group) cDNA clon... 484 e-133
5gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome... 141 3e-30
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 141 3e-30
8gb|AY830138.1| Ipomoea batatas cultivar Beauregard clone BAC117E... 68 4e-08
9gb|AY111416.1| Zea mays CL16879_1 mRNA sequence 60 1e-05
10ref|XM_481983.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
11gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
13dbj|AP005817.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
14dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
15gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P... 48 0.037
16dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
17gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.15
18emb|AL844876.4|CNS08CAZ Oryza sativa chromosome 12, . BAC OSJNBa... 46 0.15
19gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.58
20gb|AC127357.5| Mus musculus BAC clone RP23-103P11 from chromosom... 44 0.58
21emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4,... 44 0.58
22dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.58
23gb|AC008306.3|AC008306 Drosophila melanogaster, chromosome 2R, r... 44 0.58
24gb|AE003814.3| Drosophila melanogaster chromosome 2R, section 36... 44 0.58
25emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4,... 44 0.58
26gb|AC131184.4| Mus musculus BAC clone RP23-347G20 from 3, comple... 44 0.58
27ref|NM_102458.1| Arabidopsis thaliana peptidyl-prolyl cis-trans ... 42 2.3
28gb|AC068760.12| Homo sapiens 3 BAC RP11-420J11 (Roswell Park Can... 42 2.3
29gb|AC118351.14| Rattus norvegicus 1 BAC CH230-362O18 (Children's... 42 2.3
30emb|AL844213.2| Human DNA sequence from clone DAQB-352F19 on chr... 42 2.3
31emb|AL662822.4| Human DNA sequence from clone XXbac-17K10 on chr... 42 2.3
32emb|AL662800.4| Human DNA sequence from clone XXbac-249D20 on ch... 42 2.3
33emb|CR936927.1| Human DNA sequence from clone DAMC-32J6 on chrom... 42 2.3
34emb|CR759912.6| Human DNA sequence from clone DAAP-394O23 on chr... 42 2.3
35emb|CR388372.6| Human DNA sequence from clone DADB-87H23 on chro... 42 2.3
36emb|BX248096.10| Human DNA sequence from clone DASS-205E5 on chr... 42 2.3
37emb|BX927220.8| Human DNA sequence from clone DAMA-199F12 on chr... 42 2.3
38gb|BT005541.1| Arabidopsis thaliana clone U50735 unknown protein... 42 2.3
39gb|AY085848.1| Arabidopsis thaliana clone 19020 mRNA, complete s... 42 2.3
40dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA... 42 2.3
41dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility co... 42 2.3
42dbj|AK118273.1| Arabidopsis thaliana At1g26940 mRNA for unknown ... 42 2.3
43gb|AC007159.4|AC007159 Homo sapiens, clone 2_A_4, complete sequence 42 2.3
44gb|AC006139.1|AC006139 Homo sapiens clone UWGC:y55c068 from 6p21... 42 2.3
45dbj|AB014078.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA... 42 2.3
46gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence 40 9.1
47gb|AC079815.9| Trypanosoma brucei chromosome 4 clone RPCI93-3M17... 40 9.1
48gb|AC096672.14| Trypanosoma brucei chromosome 4 clone RPCI93-24M... 40 9.1
49gb|AC113158.3| Mus musculus BAC clone RP23-101D11 from chromosom... 40 9.1
50gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, c... 40 9.1
51gb|AC164156.2| Mus musculus BAC clone RP24-549I8 from chromosome... 40 9.1
52ref|XM_820240.1| Trypanosoma brucei TREU927 clone RPCI93-24M18 U... 40 9.1
53ref|XM_821383.1| Trypanosoma brucei TREU927 clone RPCI93-3M17 UD... 40 9.1
54ref|XM_821384.1| Trypanosoma brucei TREU927 clone RPCI93-3M17 UD... 40 9.1
55ref|XM_821385.1| Trypanosoma brucei TREU927 clone RPCI93-3M17 UD... 40 9.1
56ref|XM_821386.1| Trypanosoma brucei TREU927 clone RPCI93-3M17 UD... 40 9.1
57ref|XM_821387.1| Trypanosoma brucei TREU927 clone RPCI93-3M17 UD... 40 9.1
58ref|XM_389609.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 9.1
59emb|CT010465.5| Mouse DNA sequence from clone RP23-273I1 on chro... 40 9.1
60gb|AC117608.13| Mus musculus chromosome 14, clone RP23-100O3, co... 40 9.1
61gb|AC166176.5| Mus musculus 6 BAC RP24-325F2 (Roswell Park Cance... 40 9.1
62gb|AC166249.3| Mus musculus 10 BAC RP23-411N5 (Roswell Park Canc... 40 9.1
63gb|AC160965.4| Mus musculus BAC clone RP24-334E4 from chromosome... 40 9.1
64emb|AL359962.15| Human DNA sequence from clone RP11-104L21 on ch... 40 9.1
65emb|AL031733.3|HS455J7 Human DNA sequence from clone RP3-455J7 o... 40 9.1
66emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 40 9.1
67gb|AC154634.2| Mus musculus BAC clone RP23-298D14 from chromosom... 40 9.1
68gb|DQ072717.1| Homo sapiens CD3Z antigen, zeta polypeptide (TiT3... 40 9.1
69emb|BX890578.6| Mouse DNA sequence from clone RP23-72P20 on chro... 40 9.1
70gb|AC159105.2| Mus musculus BAC clone RP23-248P15 from chromosom... 40 9.1
71dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 40 9.1
72gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, co... 40 9.1
73emb|AL672069.10| Mouse DNA sequence from clone RP23-343O22 on ch... 40 9.1 
>gb|AY105004.1| Zea mays PCO112876 mRNA sequence
          Length = 1002

 Score =  507 bits (256), Expect = e-140
 Identities = 506/590 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   ctcggatccgcccgcgtcgtcttccagttaaatcatggtgatattgagttcggcttcttt 61
           |||||||||||||||||||||||||||   |||  ||||||||||||||| |||||||||
Sbjct: 156 ctcggatccgcccgcgtcgtcttccagacgaattttggtgatattgagtttggcttcttt 215

                                                                       
Query: 62  cctcatgttgcacctaagacagttgaacacatttttaaacttgtgcagcttggatgctac 121
           |||||||||||||||||||| || ||||||||||| |||||||||| |||||||||||||
Sbjct: 216 cctcatgttgcacctaagactgtcgaacacattttcaaacttgtgcggcttggatgctac 275

                                                                       
Query: 122 aatacaaatcacttcttccgggttgacaagggtttcgtagcgcaagttgccgatgtcatg 181
           | |||||||||||||||||||||||||||||||||||| || |||||||| ||||| |||
Sbjct: 276 attacaaatcacttcttccgggttgacaagggtttcgttgcacaagttgctgatgttatg 335

                                                                       
Query: 182 ggaggtagaaaagcccgtatgaataaagagcaggaacaacaggcagagaaatcaattgtt 241
             |||| |||  |||| ||||||| | |||||| || || | || |||||| ||||||||
Sbjct: 336 tcaggtcgaaccgcccctatgaatgaggagcagaaaaaagaagcggagaaaacaattgtt 395

                                                                       
Query: 242 ggtgaatttagtactttcaagcatgtcagaggaattctttcaatgggaaggtattctgat 301
           ||||||||||||| | ||||||||||||| ||||| || || ||||||||| | ||||||
Sbjct: 396 ggtgaatttagtagtgtcaagcatgtcaggggaatcctctccatgggaaggcactctgat 455

                                                                       
Query: 302 ccagacagtgcctcctcttcctttnntatcctccttggtgatgctccccaccttgatggt 361
           |||||||||||   ||||||||||  ||| || || ||  || | || || |||||||| 
Sbjct: 456 ccagacagtgctggctcttccttttctattcttctgggcaattcaccgcatcttgatggc 515

                                                                       
Query: 362 cagtatgctgtattcgggagggtgactaagggtgacgatacattaagaaaactagagcgc 421
           |||||||||||||| |||||||| ||||| |||||||||||||| |  ||||||||| | 
Sbjct: 516 cagtatgctgtatttgggagggtcactaaaggtgacgatacattgactaaactagagagg 575

                                                                       
Query: 422 ctgccaacccataaagaaggcatttttgtaatgccaattgagcgcattgagattctgtcg 481
           || |||||||  | ||||||||||||||||||||| || ||||| ||  | || || || 
Sbjct: 576 cttccaacccggagagaaggcatttttgtaatgccgatcgagcgtatcaacatcctatca 635

                                                                       
Query: 482 acatactattacgatattgatgtagagagttgtgaagcagagaagtctattcttaagagg 541
           || |||||||| ||||||||| ||||||| ||||||||||| || ||||||||   ||||
Sbjct: 636 acttactattatgatattgatctagagagctgtgaagcagaaaaatctattctccggagg 695

                                                             
Query: 542 agactttctgaatcagcatcagaagttgagagatggagacgaaaatgctt 591
           |||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 696 agactttctgaatcagcatcagaagttgagcgatggagaagaaaatgctt 745
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>dbj|AK104231.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-E09, full
           insert sequence
          Length = 1059

 Score =  492 bits (248), Expect = e-136
 Identities = 510/598 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   ctcggatccgcccgcgtcgtcttccagttaaatcatggtgatattgagttcggcttcttt 61
           |||||||||||||||||||||||||||  || ||||||||| |||||||| |||||||||
Sbjct: 168 ctcggatccgcccgcgtcgtcttccagacaactcatggtgacattgagtttggcttcttt 227

                                                                       
Query: 62  cctcatgttgcacctaagacagttgaacacatttttaaacttgtgcagcttggatgctac 121
           ||||||||||| ||||||||||||||||||||||  |||||||||  |||||| ||||||
Sbjct: 228 cctcatgttgctcctaagacagttgaacacatttacaaacttgtgaggcttgggtgctac 287

                                                                       
Query: 122 aatacaaatcacttcttccgggttgacaagggtttcgtagcgcaagttgccgatgtcatg 181
           || ||||||||||| |||||||||||||||||||| || || ||||||||   |||  ||
Sbjct: 288 aacacaaatcactttttccgggttgacaagggttttgttgcacaagttgcttctgttgtg 347

                                                                       
Query: 182 ggaggtagaaaagcccgtatgaataaagagcaggaacaacaggcagagaaatcaattgtt 241
           || |||||||  ||||  |||||| | |||||| || |  | |||||||||||  |||||
Sbjct: 348 ggtggtagaactgcccccatgaatgatgagcagcaagaggaagcagagaaatcggttgtt 407

                                                                       
Query: 242 ggtgaatttagtactttcaagcatgtcagaggaattctttcaatgggaaggtattctgat 301
           ||||||||||||||| ||||||||||||| || ||||| || ||||||||| | ||||||
Sbjct: 408 ggtgaatttagtactgtcaagcatgtcagggggattctgtccatgggaaggcactctgat 467

                                                                       
Query: 302 ccagacagtgcctcctcttcctttnntatcctccttggtgatgctccccaccttgatggt 361
           ||| ||||||     |||||||||   ||||| ||||| ||||| || ||||||||||| 
Sbjct: 468 ccaaacagtggtggttcttccttttccatccttcttggagatgcaccacaccttgatgga 527

                                                                       
Query: 362 cagtatgctgtattcgggagggtgactaagggtgacgatacattaagaaaactagagcgc 421
           |||||||||||||| || ||| | || || ||||| ||||||||||||||||| ||||  
Sbjct: 528 cagtatgctgtatttggaaggctcacaaaaggtgatgatacattaagaaaacttgagcaa 587

                                                                       
Query: 422 ctgccaacccataaagaaggcatttttgtaatgccaattgagcgcattgagattctgtcg 481
           || ||||| | || ||||||||| ||||||||||| |||||||| ||    |||||||| 
Sbjct: 588 cttccaactcgtagagaaggcatatttgtaatgcctattgagcgtatcagcattctgtca 647

                                                                       
Query: 482 acatactattacgatattgatgtagagagttgtgaagcagagaagtctattcttaagagg 541
           ||||||||||| ||| ||||| ||||||| ||||||||||| ||||| ||||||| ||||
Sbjct: 648 acatactattatgatgttgatttagagagctgtgaagcagaaaagtccattcttaggagg 707

                                                                     
Query: 542 agactttctgaatcagcatcagaagttgagagatggagacgaaaatgcttcgcatgat 599
           ||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||
Sbjct: 708 agactttctgaatcagcatcagaagttgagagatggagaagaaagtgctttgcatgat 765
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>dbj|AK059904.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G11, full
           insert sequence
          Length = 1058

 Score =  492 bits (248), Expect = e-136
 Identities = 510/598 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   ctcggatccgcccgcgtcgtcttccagttaaatcatggtgatattgagttcggcttcttt 61
           |||||||||||||||||||||||||||  || ||||||||| |||||||| |||||||||
Sbjct: 146 ctcggatccgcccgcgtcgtcttccagacaactcatggtgacattgagtttggcttcttt 205

                                                                       
Query: 62  cctcatgttgcacctaagacagttgaacacatttttaaacttgtgcagcttggatgctac 121
           ||||||||||| ||||||||||||||||||||||  |||||||||  |||||| ||||||
Sbjct: 206 cctcatgttgctcctaagacagttgaacacatttacaaacttgtgaggcttgggtgctac 265

                                                                       
Query: 122 aatacaaatcacttcttccgggttgacaagggtttcgtagcgcaagttgccgatgtcatg 181
           || ||||||||||| |||||||||||||||||||| || || ||||||||   |||  ||
Sbjct: 266 aacacaaatcactttttccgggttgacaagggttttgttgcacaagttgcttctgttgtg 325

                                                                       
Query: 182 ggaggtagaaaagcccgtatgaataaagagcaggaacaacaggcagagaaatcaattgtt 241
           || |||||||  ||||  |||||| | |||||| || |  | |||||||||||  |||||
Sbjct: 326 ggtggtagaactgcccccatgaatgatgagcagcaagaggaagcagagaaatcggttgtt 385

                                                                       
Query: 242 ggtgaatttagtactttcaagcatgtcagaggaattctttcaatgggaaggtattctgat 301
           ||||||||||||||| ||||||||||||| || ||||| || ||||||||| | ||||||
Sbjct: 386 ggtgaatttagtactgtcaagcatgtcagggggattctgtccatgggaaggcactctgat 445

                                                                       
Query: 302 ccagacagtgcctcctcttcctttnntatcctccttggtgatgctccccaccttgatggt 361
           ||| ||||||     |||||||||   ||||| ||||| ||||| || ||||||||||| 
Sbjct: 446 ccaaacagtggtggttcttccttttccatccttcttggagatgcaccacaccttgatgga 505

                                                                       
Query: 362 cagtatgctgtattcgggagggtgactaagggtgacgatacattaagaaaactagagcgc 421
           |||||||||||||| || ||| | || || ||||| ||||||||||||||||| ||||  
Sbjct: 506 cagtatgctgtatttggaaggctcacaaaaggtgatgatacattaagaaaacttgagcaa 565

                                                                       
Query: 422 ctgccaacccataaagaaggcatttttgtaatgccaattgagcgcattgagattctgtcg 481
           || ||||| | || ||||||||| ||||||||||| |||||||| ||    |||||||| 
Sbjct: 566 cttccaactcgtagagaaggcatatttgtaatgcctattgagcgtatcagcattctgtca 625

                                                                       
Query: 482 acatactattacgatattgatgtagagagttgtgaagcagagaagtctattcttaagagg 541
           ||||||||||| ||| ||||| ||||||| ||||||||||| ||||| ||||||| ||||
Sbjct: 626 acatactattatgatgttgatttagagagctgtgaagcagaaaagtccattcttaggagg 685

                                                                     
Query: 542 agactttctgaatcagcatcagaagttgagagatggagacgaaaatgcttcgcatgat 599
           ||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||
Sbjct: 686 agactttctgaatcagcatcagaagttgagagatggagaagaaagtgctttgcatgat 743
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>dbj|AK068821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168A08, full
           insert sequence
          Length = 1090

 Score =  484 bits (244), Expect = e-133
 Identities = 510/598 (85%), Gaps = 1/598 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ctcggatccgcccgcgtcgtcttccagttaaatcatggtgatattgagttcggcttcttt 61
           |||||||||||||||||||||||||||  || ||||||||| |||||||| |||||||||
Sbjct: 180 ctcggatccgcccgcgtcgtcttccagacaactcatggtgacattgagtt-ggcttcttt 238

                                                                       
Query: 62  cctcatgttgcacctaagacagttgaacacatttttaaacttgtgcagcttggatgctac 121
           ||||||||||| ||||||||||||||||||||||  |||||||||  |||||| ||||||
Sbjct: 239 cctcatgttgctcctaagacagttgaacacatttacaaacttgtgaggcttgggtgctac 298

                                                                       
Query: 122 aatacaaatcacttcttccgggttgacaagggtttcgtagcgcaagttgccgatgtcatg 181
           || ||||||||||| |||||||||||||||||||| || || ||||||||   |||  ||
Sbjct: 299 aacacaaatcactttttccgggttgacaagggttttgttgcacaagttgcttctgttgtg 358

                                                                       
Query: 182 ggaggtagaaaagcccgtatgaataaagagcaggaacaacaggcagagaaatcaattgtt 241
           || |||||||  ||||  |||||| | |||||| || |  | |||||||||||  |||||
Sbjct: 359 ggtggtagaactgcccccatgaatgatgagcagcaagaggaagcagagaaatcggttgtt 418

                                                                       
Query: 242 ggtgaatttagtactttcaagcatgtcagaggaattctttcaatgggaaggtattctgat 301
           ||||||||||||||| ||||||||||||| || ||||| || ||||||||| | ||||||
Sbjct: 419 ggtgaatttagtactgtcaagcatgtcagggggattctgtccatgggaaggcactctgat 478

                                                                       
Query: 302 ccagacagtgcctcctcttcctttnntatcctccttggtgatgctccccaccttgatggt 361
           ||| ||||||     |||||||||   ||||| ||||| ||||| || ||||||||||| 
Sbjct: 479 ccaaacagtggtggttcttccttttccatccttcttggagatgcaccacaccttgatgga 538

                                                                       
Query: 362 cagtatgctgtattcgggagggtgactaagggtgacgatacattaagaaaactagagcgc 421
           |||||||||||||| || ||| | || || ||||| ||||||||||||||||| ||||  
Sbjct: 539 cagtatgctgtatttggaaggctcacaaaaggtgatgatacattaagaaaacttgagcaa 598

                                                                       
Query: 422 ctgccaacccataaagaaggcatttttgtaatgccaattgagcgcattgagattctgtcg 481
           || ||||| | || ||||||||| ||||||||||| |||||||| ||    |||||||| 
Sbjct: 599 cttccaactcgtagagaaggcatatttgtaatgcctattgagcgtatcagcattctgtca 658

                                                                       
Query: 482 acatactattacgatattgatgtagagagttgtgaagcagagaagtctattcttaagagg 541
           ||||||||||| ||| ||||| ||||||| ||||||||||| ||||| ||||||| ||||
Sbjct: 659 acatactattatgatgttgatttagagagctgtgaagcagaaaagtccattcttaggagg 718

                                                                     
Query: 542 agactttctgaatcagcatcagaagttgagagatggagacgaaaatgcttcgcatgat 599
           ||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||
Sbjct: 719 agactttctgaatcagcatcagaagttgagagatggagaagaaagtgctttgcatgat 776
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>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0007P22, complete sequence
          Length = 148068

 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Minus

                                                                         
Query: 34    tcatggtgatattgagttcggcttctttcctcatgttgcacctaagacagttgaacacat 93
             ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 93367 tcatggtgacattgagtttggcttctttcctcatgttgctcctaagacagttgaacacat 93308

                                                                
Query: 94    ttttaaacttgtgcagcttggatgctacaatacaaatcacttcttccgggt 144
             ||  |||||||||  |||||| |||||||| ||||||||||| ||||||||
Sbjct: 93307 ttacaaacttgtgaggcttgggtgctacaacacaaatcactttttccgggt 93257



 Score =  119 bits (60), Expect = 1e-23
 Identities = 75/80 (93%)
 Strand = Plus / Minus

                                                                         
Query: 498   ttgatgtagagagttgtgaagcagagaagtctattcttaagaggagactttctgaatcag 557
             ||||| ||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||
Sbjct: 91234 ttgatttagagagctgtgaagcagaaaagtccattcttaggaggagactttctgaatcag 91175

                                 
Query: 558   catcagaagttgagagatgg 577
             ||||||||||||||||||||
Sbjct: 91174 catcagaagttgagagatgg 91155



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 128/155 (82%)
 Strand = Plus / Minus

                                                                         
Query: 142   ggttgacaagggtttcgtagcgcaagttgccgatgtcatgggaggtagaaaagcccgtat 201
             ||||||||||||||| || || ||||||||   |||  |||| |||||||  ||||  ||
Sbjct: 93174 ggttgacaagggttttgttgcacaagttgcttctgttgtgggtggtagaactgcccccat 93115

                                                                         
Query: 202   gaataaagagcaggaacaacaggcagagaaatcaattgttggtgaatttagtactttcaa 261
             |||| | |||||| || |  | |||||||||||  |||||||||||||||||||| ||||
Sbjct: 93114 gaatgatgagcagcaagaggaagcagagaaatcggttgttggtgaatttagtactgtcaa 93055

                                                
Query: 262   gcatgtcagaggaattctttcaatgggaaggtatt 296
             ||||||||| || ||||| || |||||||||||||
Sbjct: 93054 gcatgtcagggggattctgtccatgggaaggtatt 93020



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                         
Query: 361   tcagtatgctgtattcgggagggtgactaagggtgacgatacattaagaaaactagagcg 420
             ||||||||||||||| || ||| | || || ||||| ||||||||||||||||| |||| 
Sbjct: 92512 tcagtatgctgtatttggaaggctcacaaaaggtgatgatacattaagaaaacttgagca 92453

                                               
Query: 421   cctgccaacccataaagaaggcatttttgtaatg 454
              || ||||| | || ||||||||| |||||||||
Sbjct: 92452 acttccaactcgtagagaaggcatatttgtaatg 92419



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 2     ctcggatccgcccgcgtcgtcttccag 28
             |||||||||||||||||||||||||||
Sbjct: 94200 ctcggatccgcccgcgtcgtcttccag 94174
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                            
Query: 34       tcatggtgatattgagttcggcttctttcctcatgttgcacctaagacagttgaacacat 93
                ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 22359449 tcatggtgacattgagtttggcttctttcctcatgttgctcctaagacagttgaacacat 22359508

                                                                   
Query: 94       ttttaaacttgtgcagcttggatgctacaatacaaatcacttcttccgggt 144
                ||  |||||||||  |||||| |||||||| ||||||||||| ||||||||
Sbjct: 22359509 ttacaaacttgtgaggcttgggtgctacaacacaaatcactttttccgggt 22359559



 Score =  119 bits (60), Expect = 1e-23
 Identities = 75/80 (93%)
 Strand = Plus / Plus

                                                                            
Query: 498      ttgatgtagagagttgtgaagcagagaagtctattcttaagaggagactttctgaatcag 557
                ||||| ||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||
Sbjct: 22361582 ttgatttagagagctgtgaagcagaaaagtccattcttaggaggagactttctgaatcag 22361641

                                    
Query: 558      catcagaagttgagagatgg 577
                ||||||||||||||||||||
Sbjct: 22361642 catcagaagttgagagatgg 22361661



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 128/155 (82%)
 Strand = Plus / Plus

                                                                            
Query: 142      ggttgacaagggtttcgtagcgcaagttgccgatgtcatgggaggtagaaaagcccgtat 201
                ||||||||||||||| || || ||||||||   |||  |||| |||||||  ||||  ||
Sbjct: 22359642 ggttgacaagggttttgttgcacaagttgcttctgttgtgggtggtagaactgcccccat 22359701

                                                                            
Query: 202      gaataaagagcaggaacaacaggcagagaaatcaattgttggtgaatttagtactttcaa 261
                |||| | |||||| || |  | |||||||||||  |||||||||||||||||||| ||||
Sbjct: 22359702 gaatgatgagcagcaagaggaagcagagaaatcggttgttggtgaatttagtactgtcaa 22359761

                                                   
Query: 262      gcatgtcagaggaattctttcaatgggaaggtatt 296
                ||||||||| || ||||| || |||||||||||||
Sbjct: 22359762 gcatgtcagggggattctgtccatgggaaggtatt 22359796



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                            
Query: 361      tcagtatgctgtattcgggagggtgactaagggtgacgatacattaagaaaactagagcg 420
                ||||||||||||||| || ||| | || || ||||| ||||||||||||||||| |||| 
Sbjct: 22360304 tcagtatgctgtatttggaaggctcacaaaaggtgatgatacattaagaaaacttgagca 22360363

                                                  
Query: 421      cctgccaacccataaagaaggcatttttgtaatg 454
                 || ||||| | || ||||||||| |||||||||
Sbjct: 22360364 acttccaactcgtagagaaggcatatttgtaatg 22360397



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                           
Query: 2        ctcggatccgcccgcgtcgtcttccag 28
                |||||||||||||||||||||||||||
Sbjct: 22358616 ctcggatccgcccgcgtcgtcttccag 22358642



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 2        ctcggatccgcccgcgtcgtcttcca 27
                ||||||||||||||||||||||||||
Sbjct: 24663631 ctcggatccgcccgcgtcgtcttcca 24663606



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 2        ctcggatccgcccgcgtcgtcttcca 27
                ||||||||||||||||||| ||||||
Sbjct: 25461655 ctcggatccgcccgcgtcgccttcca 25461630
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  141 bits (71), Expect = 3e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                            
Query: 34       tcatggtgatattgagttcggcttctttcctcatgttgcacctaagacagttgaacacat 93
                ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 22669360 tcatggtgacattgagtttggcttctttcctcatgttgctcctaagacagttgaacacat 22669419

                                                                   
Query: 94       ttttaaacttgtgcagcttggatgctacaatacaaatcacttcttccgggt 144
                ||  |||||||||  |||||| |||||||| ||||||||||| ||||||||
Sbjct: 22669420 ttacaaacttgtgaggcttgggtgctacaacacaaatcactttttccgggt 22669470



 Score =  119 bits (60), Expect = 1e-23
 Identities = 75/80 (93%)
 Strand = Plus / Plus

                                                                            
Query: 498      ttgatgtagagagttgtgaagcagagaagtctattcttaagaggagactttctgaatcag 557
                ||||| ||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||
Sbjct: 22671493 ttgatttagagagctgtgaagcagaaaagtccattcttaggaggagactttctgaatcag 22671552

                                    
Query: 558      catcagaagttgagagatgg 577
                ||||||||||||||||||||
Sbjct: 22671553 catcagaagttgagagatgg 22671572



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 128/155 (82%)
 Strand = Plus / Plus

                                                                            
Query: 142      ggttgacaagggtttcgtagcgcaagttgccgatgtcatgggaggtagaaaagcccgtat 201
                ||||||||||||||| || || ||||||||   |||  |||| |||||||  ||||  ||
Sbjct: 22669553 ggttgacaagggttttgttgcacaagttgcttctgttgtgggtggtagaactgcccccat 22669612

                                                                            
Query: 202      gaataaagagcaggaacaacaggcagagaaatcaattgttggtgaatttagtactttcaa 261
                |||| | |||||| || |  | |||||||||||  |||||||||||||||||||| ||||
Sbjct: 22669613 gaatgatgagcagcaagaggaagcagagaaatcggttgttggtgaatttagtactgtcaa 22669672

                                                   
Query: 262      gcatgtcagaggaattctttcaatgggaaggtatt 296
                ||||||||| || ||||| || |||||||||||||
Sbjct: 22669673 gcatgtcagggggattctgtccatgggaaggtatt 22669707



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                            
Query: 361      tcagtatgctgtattcgggagggtgactaagggtgacgatacattaagaaaactagagcg 420
                ||||||||||||||| || ||| | || || ||||| ||||||||||||||||| |||| 
Sbjct: 22670215 tcagtatgctgtatttggaaggctcacaaaaggtgatgatacattaagaaaacttgagca 22670274

                                                  
Query: 421      cctgccaacccataaagaaggcatttttgtaatg 454
                 || ||||| | || ||||||||| |||||||||
Sbjct: 22670275 acttccaactcgtagagaaggcatatttgtaatg 22670308



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                           
Query: 2        ctcggatccgcccgcgtcgtcttccag 28
                |||||||||||||||||||||||||||
Sbjct: 22668527 ctcggatccgcccgcgtcgtcttccag 22668553



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 2        ctcggatccgcccgcgtcgtcttcca 27
                ||||||||||||||||||||||||||
Sbjct: 24975301 ctcggatccgcccgcgtcgtcttcca 24975276



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 2        ctcggatccgcccgcgtcgtcttcca 27
                ||||||||||||||||||| ||||||
Sbjct: 25780325 ctcggatccgcccgcgtcgccttcca 25780300
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>gb|AY830138.1| Ipomoea batatas cultivar Beauregard clone BAC117E14, complete sequence
          Length = 99025

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 60/66 (90%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                         
Query: 80    acagttgaacacatttttaaacttgtgcagcttgg-atgctacaatacaaatcacttctt 138
             |||||||| ||||| || |||||||||| |||||| |||||||||||| |||||||||||
Sbjct: 98022 acagttgagcacatcttcaaacttgtgc-gcttgggatgctacaatactaatcacttctt 97964

                   
Query: 139   ccgggt 144
             ||||||
Sbjct: 97963 ccgggt 97958



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 258   tcaagcatgtcagaggaattctttcaatgggaaggta 294
             |||| ||||| |||||||||||||| |||||||||||
Sbjct: 97705 tcaaacatgtaagaggaattctttctatgggaaggta 97669
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>gb|AY111416.1| Zea mays CL16879_1 mRNA sequence
          Length = 532

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 506 gagagttgtgaagcagagaagtctattcttaagaggagactttctgaatcagcatcagaa 565
           ||||| ||||||| ||| || |||| ||||  |||||||||||||||||| |||||| ||
Sbjct: 228 gagagctgtgaagtagaaaactctaatctttggaggagactttctgaatctgcatcaaaa 287

                 
Query: 566 gttgag 571
           ||||||
Sbjct: 288 gttgag 293
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>ref|XM_481983.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 627

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 2   ctcggatccgcccgcgtcgtcttcca 27
           ||||||||||||||||||||||||||
Sbjct: 463 ctcggatccgcccgcgtcgtcttcca 488
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>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0041L19, complete sequence
          Length = 155086

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                        
Query: 2      ctcggatccgcccgcgtcgtcttcca 27
              ||||||||||||||||||||||||||
Sbjct: 140533 ctcggatccgcccgcgtcgtcttcca 140508
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 2        ctcggatccgcccgcgtcgtcttcca 27
                ||||||||||||||||||||||||||
Sbjct: 16875888 ctcggatccgcccgcgtcgtcttcca 16875863
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>dbj|AP005817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_F01
          Length = 119248

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 2     ctcggatccgcccgcgtcgtcttcca 27
             ||||||||||||||||||||||||||
Sbjct: 89253 ctcggatccgcccgcgtcgtcttcca 89228
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>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1484_G09
          Length = 124695

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 2     ctcggatccgcccgcgtcgtcttcca 27
             ||||||||||||||||||||||||||
Sbjct: 22899 ctcggatccgcccgcgtcgtcttcca 22874
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>gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P11 genomic sequence, complete
             sequence
          Length = 85372

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 260   aagcatgtcagaggaattctttcaatgggaaggtat 295
             |||||||||||||| | |||||| ||||||||||||
Sbjct: 51773 aagcatgtcagaggtactctttccatgggaaggtat 51808
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 3        tcggatccgcccgcgtcgtcttc 25
                |||||||||||||||||||||||
Sbjct: 15214257 tcggatccgcccgcgtcgtcttc 15214279
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 3        tcggatccgcccgcgtcgtcttc 25
                |||||||||||||||||||||||
Sbjct: 15168540 tcggatccgcccgcgtcgtcttc 15168562
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>emb|AL844876.4|CNS08CAZ Oryza sativa chromosome 12, . BAC OSJNBa0063F10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153687

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 3     tcggatccgcccgcgtcgtcttc 25
             |||||||||||||||||||||||
Sbjct: 41661 tcggatccgcccgcgtcgtcttc 41639
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>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0485F09, complete sequence
          Length = 161276

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 2     ctcggatccgcccgcgtcgtcttcca 27
             ||||||||||||||||||| ||||||
Sbjct: 68546 ctcggatccgcccgcgtcgccttcca 68521
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>gb|AC127357.5| Mus musculus BAC clone RP23-103P11 from chromosome 3, complete sequence
          Length = 220032

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 342   atgctccccaccttgatggtca 363
             ||||||||||||||||||||||
Sbjct: 74941 atgctccccaccttgatggtca 74920
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>emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067G20,
              complete sequence
          Length = 145825

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 2      ctcggatccgcccgcgtcgtcttcca 27
              ||||||||||||| ||||||||||||
Sbjct: 124520 ctcggatccgcccacgtcgtcttcca 124495
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 2        ctcggatccgcccgcgtcgtcttcca 27
                ||||||||||||| ||||||||||||
Sbjct: 16163770 ctcggatccgcccacgtcgtcttcca 16163745
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>gb|AC008306.3|AC008306 Drosophila melanogaster, chromosome 2R, region 51B-51B, BAC clone
              BACR27M04, complete sequence
          Length = 169689

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 504    tagagagttgtgaagcagagaa 525
              ||||||||||||||||||||||
Sbjct: 110793 tagagagttgtgaagcagagaa 110814
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>gb|AE003814.3| Drosophila melanogaster chromosome 2R, section 36 of 73 of the complete
              sequence
          Length = 254438

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 504    tagagagttgtgaagcagagaa 525
              ||||||||||||||||||||||
Sbjct: 215067 tagagagttgtgaagcagagaa 215088
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>emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062B06,
            complete sequence
          Length = 187154

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 2    ctcggatccgcccgcgtcgtcttcca 27
            ||||||||||||| ||||||||||||
Sbjct: 8687 ctcggatccgcccacgtcgtcttcca 8662
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>gb|AC131184.4| Mus musculus BAC clone RP23-347G20 from 3, complete sequence
          Length = 203243

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 342   atgctccccaccttgatggtca 363
             ||||||||||||||||||||||
Sbjct: 12685 atgctccccaccttgatggtca 12706
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>ref|NM_102458.1| Arabidopsis thaliana peptidyl-prolyl cis-trans isomerase AT1G26940
           mRNA, complete cds
          Length = 931

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 260 aagcatgtcagaggaattctttcaatgggaaggtattctgatccagacagtgc 312
           |||||||||||||| | |||||| |||||||| |||   |||||| |||||||
Sbjct: 410 aagcatgtcagaggtactctttccatgggaagatatgacgatccaaacagtgc 462



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 472 gattctgtcgacatactattacga 495
           |||| |||||||||||||||||||
Sbjct: 622 gattttgtcgacatactattacga 645
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>gb|AC068760.12| Homo sapiens 3 BAC RP11-420J11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 193208

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 88    acacatttttaaacttgtgca 108
             |||||||||||||||||||||
Sbjct: 52622 acacatttttaaacttgtgca 52602
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>gb|AC118351.14| Rattus norvegicus 1 BAC CH230-362O18 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 143705

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 343   tgctccccaccttgatggtca 363
             |||||||||||||||||||||
Sbjct: 63117 tgctccccaccttgatggtca 63137
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>emb|AL844213.2| Human DNA sequence from clone DAQB-352F19 on chromosome 6 Contains the
             TMPOP1 pseudogene for thymopoietin-like 1, the SUCLA2P
             pseudogene for succinate-CoA ligase, ADP-forming, beta
             subunit, the RANP1 pseudogene for RAN, member RAS oncogene
             family pseudogene 1, HLA-E gene for major
             histocompatibility complex, class I, E, and 6 CpG islands,
             complete sequence
          Length = 97630

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 436   agaaggcatttttgtaatgcc 456
             |||||||||||||||||||||
Sbjct: 81432 agaaggcatttttgtaatgcc 81452
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>emb|AL662822.4| Human DNA sequence from clone XXbac-17K10 on chromosome 6 contains a
              major histocompatibility complex class 1-related
              polypeptide sequence B (MICB) pseudogene, a  thymopoietin
              (TMPO) pseudogene, a succinate-CoA ligase, ADP forming,
              beta subunit (SUCLA2) pseudogene, a RAN, member RAS
              oncogene family pseudogene, the HLA-E gene for major
              histocompatibility complex, class I, E and six CpG islands,
              complete sequence
          Length = 162948

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 436    agaaggcatttttgtaatgcc 456
              |||||||||||||||||||||
Sbjct: 138579 agaaggcatttttgtaatgcc 138599
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>emb|AL662800.4| Human DNA sequence from clone XXbac-249D20 on chromosome 6 contains the
             GNL1 gene for guanine nucleotide binding protein-like 1,
             the gene for CAT56 protein, the ABCF1 gene for ATP-binding
             cassette, subfamily F, member 1, the PPP1R10 gene for
             protein phosphatase 1, regulatory subunit 10, the MRPS18B
             gene for  mitochondrial ribosomal protein S18B, two novel
             proteins, a prothymosin alpha (PTMA) pseudogene and four
             CpG islands, complete sequence
          Length = 151228

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 436   agaaggcatttttgtaatgcc 456
             |||||||||||||||||||||
Sbjct: 20454 agaaggcatttttgtaatgcc 20474
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>emb|CR936927.1| Human DNA sequence from clone DAMC-32J6 on chromosome 6, complete
            sequence
          Length = 44783

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 436  agaaggcatttttgtaatgcc 456
            |||||||||||||||||||||
Sbjct: 7829 agaaggcatttttgtaatgcc 7849
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>emb|CR759912.6| Human DNA sequence from clone DAAP-394O23 on chromosome 6, complete
             sequence
          Length = 47462

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 436   agaaggcatttttgtaatgcc 456
             |||||||||||||||||||||
Sbjct: 13352 agaaggcatttttgtaatgcc 13372
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>emb|CR388372.6| Human DNA sequence from clone DADB-87H23 on chromosome 6, complete
             sequence
          Length = 70448

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 436   agaaggcatttttgtaatgcc 456
             |||||||||||||||||||||
Sbjct: 15448 agaaggcatttttgtaatgcc 15468
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>emb|BX248096.10| Human DNA sequence from clone DASS-205E5 on chromosome 6, complete
             sequence
          Length = 23481

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 436   agaaggcatttttgtaatgcc 456
             |||||||||||||||||||||
Sbjct: 15271 agaaggcatttttgtaatgcc 15291
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>emb|BX927220.8| Human DNA sequence from clone DAMA-199F12 on chromosome 6, complete
            sequence
          Length = 82724

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 436  agaaggcatttttgtaatgcc 456
            |||||||||||||||||||||
Sbjct: 8395 agaaggcatttttgtaatgcc 8415
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>gb|BT005541.1| Arabidopsis thaliana clone U50735 unknown protein (At1g26940) mRNA,
           complete cds
          Length = 712

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 260 aagcatgtcagaggaattctttcaatgggaaggtattctgatccagacagtgc 312
           |||||||||||||| | |||||| |||||||| |||   |||||| |||||||
Sbjct: 343 aagcatgtcagaggtactctttccatgggaagatatgacgatccaaacagtgc 395



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 472 gattctgtcgacatactattacga 495
           |||| |||||||||||||||||||
Sbjct: 555 gattttgtcgacatactattacga 578
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>gb|AY085848.1| Arabidopsis thaliana clone 19020 mRNA, complete sequence
          Length = 931

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 260 aagcatgtcagaggaattctttcaatgggaaggtattctgatccagacagtgc 312
           |||||||||||||| | |||||| |||||||| |||   |||||| |||||||
Sbjct: 410 aagcatgtcagaggtactctttccatgggaagatatgacgatccaaacagtgc 462



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 472 gattctgtcgacatactattacga 495
           |||| |||||||||||||||||||
Sbjct: 622 gattttgtcgacatactattacga 645
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>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region
          Length = 2229817

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 436     agaaggcatttttgtaatgcc 456
               |||||||||||||||||||||
Sbjct: 1421901 agaaggcatttttgtaatgcc 1421881
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>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region
          Length = 1750601

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 436    agaaggcatttttgtaatgcc 456
              |||||||||||||||||||||
Sbjct: 997219 agaaggcatttttgtaatgcc 997199
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>dbj|AK118273.1| Arabidopsis thaliana At1g26940 mRNA for unknown protein, complete
           cds, clone: RAFL19-56-O08
          Length = 937

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 260 aagcatgtcagaggaattctttcaatgggaaggtattctgatccagacagtgc 312
           |||||||||||||| | |||||| |||||||| |||   |||||| |||||||
Sbjct: 396 aagcatgtcagaggtactctttccatgggaagatatgacgatccaaacagtgc 448



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 472 gattctgtcgacatactattacga 495
           |||| |||||||||||||||||||
Sbjct: 608 gattttgtcgacatactattacga 631
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>gb|AC007159.4|AC007159 Homo sapiens, clone 2_A_4, complete sequence
          Length = 155021

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 361   tcagtatgctgtattcgggag 381
             |||||||||||||||||||||
Sbjct: 61336 tcagtatgctgtattcgggag 61356
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>gb|AC006139.1|AC006139 Homo sapiens clone UWGC:y55c068 from 6p21, complete sequence
          Length = 46201

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 436   agaaggcatttttgtaatgcc 456
             |||||||||||||||||||||
Sbjct: 13183 agaaggcatttttgtaatgcc 13163
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>dbj|AB014078.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, Cosmid
             clone:TY1C6, complete sequence
          Length = 22738

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 436   agaaggcatttttgtaatgcc 456
             |||||||||||||||||||||
Sbjct: 11966 agaaggcatttttgtaatgcc 11946
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>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence
          Length = 1590432

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 615     cttcttttcccttttggcgt 634
               ||||||||||||||||||||
Sbjct: 1435861 cttcttttcccttttggcgt 1435842



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 615     cttcttttcccttttggcgt 634
               ||||||||||||||||||||
Sbjct: 1434102 cttcttttcccttttggcgt 1434083



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 615     cttcttttcccttttggcgt 634
               ||||||||||||||||||||
Sbjct: 1432343 cttcttttcccttttggcgt 1432324



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 615     cttcttttcccttttggcgt 634
               ||||||||||||||||||||
Sbjct: 1430584 cttcttttcccttttggcgt 1430565



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 615     cttcttttcccttttggcgt 634
               ||||||||||||||||||||
Sbjct: 1428825 cttcttttcccttttggcgt 1428806



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 615     cttcttttcccttttggcgt 634
               ||||||||||||||||||||
Sbjct: 1427066 cttcttttcccttttggcgt 1427047
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>gb|AC079815.9| Trypanosoma brucei chromosome 4 clone RPCI93-3M17, complete sequence
          Length = 144365

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    cttcttttcccttttggcgt 634
              ||||||||||||||||||||
Sbjct: 113748 cttcttttcccttttggcgt 113729



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    cttcttttcccttttggcgt 634
              ||||||||||||||||||||
Sbjct: 111989 cttcttttcccttttggcgt 111970



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    cttcttttcccttttggcgt 634
              ||||||||||||||||||||
Sbjct: 110230 cttcttttcccttttggcgt 110211



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    cttcttttcccttttggcgt 634
              ||||||||||||||||||||
Sbjct: 108471 cttcttttcccttttggcgt 108452



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    cttcttttcccttttggcgt 634
              ||||||||||||||||||||
Sbjct: 106712 cttcttttcccttttggcgt 106693



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    cttcttttcccttttggcgt 634
              ||||||||||||||||||||
Sbjct: 104953 cttcttttcccttttggcgt 104934
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>gb|AC096672.14| Trypanosoma brucei chromosome 4 clone RPCI93-24M18, complete sequence
          Length = 158627

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 615  cttcttttcccttttggcgt 634
            ||||||||||||||||||||
Sbjct: 4056 cttcttttcccttttggcgt 4037



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 615  cttcttttcccttttggcgt 634
            ||||||||||||||||||||
Sbjct: 2297 cttcttttcccttttggcgt 2278



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 615 cttcttttcccttttggcgt 634
           ||||||||||||||||||||
Sbjct: 538 cttcttttcccttttggcgt 519
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>gb|AC113158.3| Mus musculus BAC clone RP23-101D11 from chromosome 9, complete sequence
          Length = 188085

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 342    atgctccccaccttgatggt 361
              ||||||||||||||||||||
Sbjct: 104605 atgctccccaccttgatggt 104624
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>gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, complete sequence
          Length = 222382

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 560    tcagaagttgagagatggag 579
              ||||||||||||||||||||
Sbjct: 220650 tcagaagttgagagatggag 220631
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>gb|AC164156.2| Mus musculus BAC clone RP24-549I8 from chromosome 1, complete sequence
          Length = 173764

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   atgctccccaccttgatggt 361
             ||||||||||||||||||||
Sbjct: 24694 atgctccccaccttgatggt 24675
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>ref|XM_820240.1| Trypanosoma brucei TREU927 clone RPCI93-24M18
           UDP-Gal/UDP-GlcNAc-dependent glycosyltransferase
           (Tb927.4.5300) partial mRNA
          Length = 1011

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 615 cttcttttcccttttggcgt 634
           ||||||||||||||||||||
Sbjct: 980 cttcttttcccttttggcgt 999
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>ref|XM_821383.1| Trypanosoma brucei TREU927 clone RPCI93-3M17
            UDP-Gal/UDP-GlcNAc-dependent glycosyltransferase
            (Tb927.4.5250) partial mRNA
          Length = 1203

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 615  cttcttttcccttttggcgt 634
            ||||||||||||||||||||
Sbjct: 1172 cttcttttcccttttggcgt 1191
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>ref|XM_821384.1| Trypanosoma brucei TREU927 clone RPCI93-3M17
            UDP-Gal/UDP-GlcNAc-dependent glycosyltransferase
            (Tb927.4.5260) partial mRNA
          Length = 1203

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 615  cttcttttcccttttggcgt 634
            ||||||||||||||||||||
Sbjct: 1172 cttcttttcccttttggcgt 1191
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>ref|XM_821385.1| Trypanosoma brucei TREU927 clone RPCI93-3M17
            UDP-Gal/UDP-GlcNAc-dependent glycosyltransferase
            (Tb927.4.5270) partial mRNA
          Length = 1203

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 615  cttcttttcccttttggcgt 634
            ||||||||||||||||||||
Sbjct: 1172 cttcttttcccttttggcgt 1191
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>ref|XM_821386.1| Trypanosoma brucei TREU927 clone RPCI93-3M17
            UDP-Gal/UDP-GlcNAc-dependent glycosyltransferase
            (Tb927.4.5280) partial mRNA
          Length = 1203

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 615  cttcttttcccttttggcgt 634
            ||||||||||||||||||||
Sbjct: 1172 cttcttttcccttttggcgt 1191
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>ref|XM_821387.1| Trypanosoma brucei TREU927 clone RPCI93-3M17
            UDP-Gal/UDP-GlcNAc-dependent glycosyltransferase
            (Tb927.4.5290) partial mRNA
          Length = 1203

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 615  cttcttttcccttttggcgt 634
            ||||||||||||||||||||
Sbjct: 1172 cttcttttcccttttggcgt 1191
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>ref|XM_389609.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09433.1)
           partial mRNA
          Length = 639

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 468 ttgagattctgtcgacatactatt 491
           ||||||||||| ||||||||||||
Sbjct: 13  ttgagattctggcgacatactatt 36
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>emb|CT010465.5| Mouse DNA sequence from clone RP23-273I1 on chromosome 13, complete
              sequence
          Length = 220594

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 430    ccataaagaaggcatttttg 449
              ||||||||||||||||||||
Sbjct: 184530 ccataaagaaggcatttttg 184549
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>gb|AC117608.13| Mus musculus chromosome 14, clone RP23-100O3, complete sequence
          Length = 210905

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 342    atgctccccaccttgatggt 361
              ||||||||||||||||||||
Sbjct: 193479 atgctccccaccttgatggt 193460
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>gb|AC166176.5| Mus musculus 6 BAC RP24-325F2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 190157

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    acagtgcctcctcttccttt 325
              ||||||||||||||||||||
Sbjct: 168668 acagtgcctcctcttccttt 168649
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>gb|AC166249.3| Mus musculus 10 BAC RP23-411N5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 203983

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    acagtgcctcctcttccttt 325
              ||||||||||||||||||||
Sbjct: 164284 acagtgcctcctcttccttt 164303
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>gb|AC160965.4| Mus musculus BAC clone RP24-334E4 from chromosome 1, complete sequence
          Length = 182270

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   atgctccccaccttgatggt 361
             ||||||||||||||||||||
Sbjct: 42129 atgctccccaccttgatggt 42148
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>emb|AL359962.15| Human DNA sequence from clone RP11-104L21 on chromosome 1q23.3-25.1
             Contains the 3' end of the POU2F1 gene for POU domain
             class 2 transcription factor 1,  the 3' end of the CD3Z
             gene for CD3Z antigen zeta polypeptide (TiT3 complex) and
             two CpG islands, complete sequence
          Length = 67173

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 300   atccagacagtgcctcctcttcct 323
             ||||||||||||||||||| ||||
Sbjct: 66298 atccagacagtgcctcctcctcct 66275
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>emb|AL031733.3|HS455J7 Human DNA sequence from clone RP3-455J7 on chromosome 1q24 Contains the
              5' end of the CD3Z gene for CD3Z antigen zeta polypeptide
              (TiT3 complex), an aldo-keto reductase family 1 member D1
              (delta 4-3-ketosteroid-5-beta-reductase) (AKR1D1)
              pseudogene, the CREG gene for cellular repressor of
              E1A-stimulated genes, a ribosomal protein S18 (RPS18)
              pseudogene, a novel gene, the 5' end of the gene for a
              novel protein and a CpG island, complete sequence
          Length = 215861

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 300    atccagacagtgcctcctcttcct 323
              ||||||||||||||||||| ||||
Sbjct: 214737 atccagacagtgcctcctcctcct 214760
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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 588     gcttcgcatgatccagcgat 607
               ||||||||||||||||||||
Sbjct: 1114832 gcttcgcatgatccagcgat 1114851
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>gb|AC154634.2| Mus musculus BAC clone RP23-298D14 from chromosome 14, complete sequence
          Length = 218356

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 342    atgctccccaccttgatggt 361
              ||||||||||||||||||||
Sbjct: 196779 atgctccccaccttgatggt 196798
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>gb|DQ072717.1| Homo sapiens CD3Z antigen, zeta polypeptide (TiT3 complex) (CD3Z) gene,
             complete cds
          Length = 90859

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 300   atccagacagtgcctcctcttcct 323
             ||||||||||||||||||| ||||
Sbjct: 36125 atccagacagtgcctcctcctcct 36148
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>emb|BX890578.6| Mouse DNA sequence from clone RP23-72P20 on chromosome X, complete
             sequence
          Length = 161519

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    tcctcatgttgcacctaaga 80
             ||||||||||||||||||||
Sbjct: 40506 tcctcatgttgcacctaaga 40525
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>gb|AC159105.2| Mus musculus BAC clone RP23-248P15 from chromosome 13, complete
             sequence
          Length = 182994

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   ccataaagaaggcatttttg 449
             ||||||||||||||||||||
Sbjct: 23333 ccataaagaaggcatttttg 23314
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>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 458     attgagcgcattgagattct 477
               ||||||||||||||||||||
Sbjct: 2116803 attgagcgcattgagattct 2116822
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>gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, complete sequence
          Length = 165190

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   tcagaagttgagagatggag 579
             ||||||||||||||||||||
Sbjct: 83575 tcagaagttgagagatggag 83594
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>emb|AL672069.10| Mouse DNA sequence from clone RP23-343O22 on chromosome X, complete
             sequence
          Length = 161147

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    tcctcatgttgcacctaaga 80
             ||||||||||||||||||||
Sbjct: 40135 tcctcatgttgcacctaaga 40154


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,334,108
Number of Sequences: 3902068
Number of extensions: 6334108
Number of successful extensions: 122714
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122231
Number of HSP's gapped (non-prelim): 473
length of query: 663
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 640
effective length of database: 17,143,297,704
effective search space: 10971710530560
effective search space used: 10971710530560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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