| Clone Name | bags21l17 |
|---|---|
| Clone Library Name | barley_pub |
>CALX_SOYBN (Q39817) Calnexin homolog precursor| Length = 546 Score = 125 bits (315), Expect = 4e-29 Identities = 62/109 (56%), Positives = 75/109 (68%) Frame = +3 Query: 3 LFDXILIADDEKVAMSILEKTWKPKFVVXXXXXXXXXXXXXXSEDLSEFQKKIFSVLYKI 182 LFD +LIA+D+KVA S E TWKPKF V S+ +S FQKK+F +LYKI Sbjct: 389 LFDNVLIANDDKVAESYRETTWKPKFTVEKDKLKAEEEAATGSDGISGFQKKVFDLLYKI 448 Query: 183 ADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGG 329 ADIPFL +K KI DLIEK EKQPN+TI IL +V V+ V++ FR IFGG Sbjct: 449 ADIPFLSEHKSKIFDLIEKAEKQPNLTIGILVAVVVVFVSIFFRLIFGG 497
>CALX2_ARATH (Q38798) Calnexin homolog 2 precursor| Length = 532 Score = 114 bits (286), Expect = 1e-25 Identities = 61/158 (38%), Positives = 84/158 (53%) Frame = +3 Query: 3 LFDXILIADDEKVAMSILEKTWKPKFVVXXXXXXXXXXXXXXSEDLSEFQKKIFSVLYKI 182 LFD ILI+ DEKVA + + TWKPKF V ++ L +QKK+F +LYK+ Sbjct: 382 LFDNILISKDEKVAETYRQSTWKPKFDVEKEKQKAEDEAAGEADGLKSYQKKVFDLLYKV 441 Query: 183 ADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGGXXXXXXXXXXX 362 ADI FL YK KI++LIEK E QPN+TI +L S+ ++ +++ F+ IFGG Sbjct: 442 ADISFLSAYKSKIMELIEKAETQPNLTIGVLISIVIVFLSLFFKLIFGGAKAKVEKKKPE 501 Query: 363 XXXXXSATEADAAGSSGXXXXXXXXXXXTAAPRRRSRR 476 S +EA + AAPR+R R Sbjct: 502 TAAETSTSEAKTEEKA----------EAVAAPRKRQTR 529
>CALX_PEA (O82709) Calnexin homolog precursor| Length = 551 Score = 111 bits (277), Expect = 1e-24 Identities = 65/164 (39%), Positives = 83/164 (50%), Gaps = 6/164 (3%) Frame = +3 Query: 3 LFDXILIADDEKVAMSILEKTWKPKFVVXXXX------XXXXXXXXXXSEDLSEFQKKIF 164 LFD +LIA D+K+A S E TWKPKF + SE ++ QKK F Sbjct: 388 LFDNVLIAKDDKIAESYRETTWKPKFNIEKEKQKHEEEAAAAAAARSESEGIAGIQKKAF 447 Query: 165 SVLYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGGXXXXX 344 +LYKIADI FL K KII++IEKGEKQPN+TI I+ SV ++ V++ FR IFGG Sbjct: 448 DLLYKIADIAFLSGQKEKIIEIIEKGEKQPNLTIGIIVSVVIVFVSIFFRLIFGG--KKP 505 Query: 345 XXXXXXXXXXXSATEADAAGSSGXXXXXXXXXXXTAAPRRRSRR 476 + TE + G PRRR +R Sbjct: 506 ANVEANVEKKKTNTETTSKQDGGEKEDNKEKEETANPPRRRPKR 549
>CALX1_ARATH (P29402) Calnexin homolog 1 precursor| Length = 530 Score = 105 bits (262), Expect = 6e-23 Identities = 59/158 (37%), Positives = 80/158 (50%) Frame = +3 Query: 3 LFDXILIADDEKVAMSILEKTWKPKFVVXXXXXXXXXXXXXXSEDLSEFQKKIFSVLYKI 182 LFD ILIA DEKVA + + TWKPKF V ++ L +QK +F +L K+ Sbjct: 380 LFDNILIAKDEKVAETYRQTTWKPKFDVEKEKQKAEEEAAGSADGLKSYQKVVFDLLNKV 439 Query: 183 ADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGGXXXXXXXXXXX 362 AD+ FL YK KI +LIEK E+QPN+TI +L ++ V+ ++ + IFGG Sbjct: 440 ADLSFLSAYKSKITELIEKAEQQPNLTIGVLVAIVVVFFSLFLKLIFGGKKAAAPVEKKK 499 Query: 363 XXXXXSATEADAAGSSGXXXXXXXXXXXTAAPRRRSRR 476 S+ D A TAAPR+R R Sbjct: 500 PEVAESSKSGDEAEKK----------EETAAPRKRQPR 527
>CALX_HELTU (Q39994) Calnexin homolog precursor| Length = 540 Score = 86.3 bits (212), Expect = 4e-17 Identities = 56/164 (34%), Positives = 75/164 (45%), Gaps = 6/164 (3%) Frame = +3 Query: 3 LFDXILIADDEKVA------MSILEKTWKPKFVVXXXXXXXXXXXXXXSEDLSEFQKKIF 164 LFD ILIA DEK A + WK + + L QK +F Sbjct: 384 LFDNILIASDEKTAAKSGILLGSRSLRWKKR-------NRRLKKNQPLLDGLKGIQKAVF 436 Query: 165 SVLYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGGXXXXX 344 VLYKIAD+PFL +K+K+++LIEK E QPNITI ++ S+ V++ ++L + +FGG Sbjct: 437 DVLYKIADLPFLGDHKVKVLELIEKAETQPNITIGVIVSIIVVIFSILLKLLFGG--KKA 494 Query: 345 XXXXXXXXXXXSATEADAAGSSGXXXXXXXXXXXTAAPRRRSRR 476 EA AAPRRR RR Sbjct: 495 APKVNVVPKKKEEPEASNTAEVREGEEEKTEGEVAAAPRRRPRR 538
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 31.6 bits (70), Expect = 1.1 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = +2 Query: 272 FGLSCCHPCYCALQNHFRWQEGSGTCEA----RCCGEEAQCHGSRC 397 +G C CYC+ + Q G+ C A R C + C+ S C Sbjct: 177 WGAQCASACYCSATSRCDPQTGACLCHAGWWGRSCNNQCACNSSPC 222
>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein| 5.6) (Ultrahigh sulfur keratin-associated protein 5.6) Length = 129 Score = 30.8 bits (68), Expect = 1.9 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +2 Query: 281 SCCHPCYCALQNHFRWQEGSGTCEARCC 364 SCC PCYC+ GS C++ CC Sbjct: 89 SCCKPCYCSSGC------GSSCCQSSCC 110
>ZNF77_HUMAN (Q15935) Zinc finger protein 77 (ZNFpT1)| Length = 545 Score = 30.4 bits (67), Expect = 2.5 Identities = 10/32 (31%), Positives = 17/32 (53%) Frame = +2 Query: 296 CYCALQNHFRWQEGSGTCEARCCGEEAQCHGS 391 CY + ++H R G C+ + CG+ C+ S Sbjct: 307 CYSSFRDHVRTHTGEKPCQCKHCGKAFTCYSS 338
>CRTC_NICPL (Q40401) Calreticulin precursor| Length = 416 Score = 29.3 bits (64), Expect = 5.5 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 Query: 3 LFDXILIADDEKVAMSILEKTW 68 LFD I+I DD + A +I E+TW Sbjct: 335 LFDNIVICDDPEYAKAIAEETW 356
>LAMB1_HUMAN (P07942) Laminin beta-1 chain precursor (Laminin B1 chain)| Length = 1786 Score = 28.9 bits (63), Expect = 7.2 Identities = 16/40 (40%), Positives = 17/40 (42%) Frame = +2 Query: 266 FDFGLSCCHPCYCALQNHFRWQEGSGTCEARCCGEEAQCH 385 F FG S C PC C LQ G+ A C QCH Sbjct: 811 FGFGPSGCKPCECHLQ---------GSVNAFCNPVTGQCH 841
>CRTC1_ARATH (O04151) Calreticulin-1 precursor| Length = 425 Score = 28.9 bits (63), Expect = 7.2 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +3 Query: 3 LFDXILIADDEKVAMSILEKTW 68 LFD +L++DD + A + E+TW Sbjct: 330 LFDNVLVSDDPEYAKKLAEETW 351
>FA35A_MOUSE (Q3UEN2) Protein FAM35A| Length = 898 Score = 28.9 bits (63), Expect = 7.2 Identities = 14/48 (29%), Positives = 28/48 (58%) Frame = +3 Query: 180 IADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLFRTIF 323 + D+P +P K+ ++ +E + QP+I + A + V+ VTVL ++ Sbjct: 542 LKDLPQRQPQKMNTVEFVELEQLQPDILVH--AVLRVVDVTVLTEALY 587
>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein| 5.2) (Ultrahigh sulfur keratin-associated protein 5.2) (Keratin-associated protein 5-8) (Keratin-associated protein 5.8) Length = 177 Score = 28.9 bits (63), Expect = 7.2 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = +2 Query: 281 SCCHPCYCALQNHFRWQEGSGTCEARCCGEEAQCHGSRC 397 SCC PC C+ GS C++ CC + C S C Sbjct: 117 SCCKPCCCSSGC------GSSCCQSSCC-KPCCCQSSCC 148
>SYFA_METJA (Q57911) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 480 Score = 28.5 bits (62), Expect = 9.4 Identities = 17/39 (43%), Positives = 24/39 (61%) Frame = +3 Query: 132 EDLSEFQKKIFSVLYKIADIPFLEPYKIKIIDLIEKGEK 248 +D SE +KKI +L K + F E +IK I L EKG++ Sbjct: 143 DDFSEEEKKIIDILKKRGYVDFDEEKEIK-IKLTEKGKE 180
>KRA54_HUMAN (Q6L8H1) Keratin-associated protein 5-4 (Keratin-associated protein| 5.4) (Ultrahigh sulfur keratin-associated protein 5.4) Length = 288 Score = 28.5 bits (62), Expect = 9.4 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = +2 Query: 281 SCCHPCYCALQNHFRWQEGSGTCEARCCGEEAQCHGSRC 397 SCC PC C+ GS C++ CC + C S C Sbjct: 200 SCCKPCCCSSGC------GSSCCQSSCC--KPCCSSSGC 230
>CRTC_BETVU (O81919) Calreticulin precursor| Length = 416 Score = 28.5 bits (62), Expect = 9.4 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +3 Query: 3 LFDXILIADDEKVAMSILEKTW 68 LFD +L+ DD + A + E+TW Sbjct: 333 LFDNVLVCDDPEYAKQLAEETW 354
>ACVR1_BOVIN (Q28041) Activin receptor type-1 precursor (EC 2.7.11.30) (Activin| receptor type I) (ACTR-I) (Serine/threonine-protein kinase receptor R1) (SKR1) Length = 509 Score = 28.5 bits (62), Expect = 9.4 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +2 Query: 347 CEARCCGEEAQCHGSRC 397 CE CG+EA C G +C Sbjct: 37 CEGLSCGDEAHCEGQQC 53 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,821,945 Number of Sequences: 219361 Number of extensions: 738183 Number of successful extensions: 2506 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2403 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2499 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)