ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags22a02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YFRA_PROVU (P20925) Frd operon probable iron-sulfur protein A (F... 32 2.3

>YFRA_PROVU (P20925) Frd operon probable iron-sulfur protein A (Fragment)|
          Length = 157

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +1

Query: 358 QCLKLPFLSVCCNGW----RDFWYHCYDI*RGCSTCLFWCP 468
           QC   P  +VC NG     +D++Y   D   GC TC+  CP
Sbjct: 36  QCEDAPCANVCPNGAIIHNKDYYYVDQDKCIGCKTCVLACP 76


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,334,206
Number of Sequences: 219361
Number of extensions: 1455254
Number of successful extensions: 3523
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3521
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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