>AMPN_ACEPA (Q10736) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide|
           hydrolase) (Fragment)
          Length = 355

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
 Frame = +3

Query: 267 DGSRVGVYGKPANEDFEADYA-HWKRVVSKSYVNGMGIDWSKVRNVMDMRAVYGGFAAAL 443
           DG+ + VY  P+  + + +YA H    +   Y N  G+ +   +  MDM A+ G + A  
Sbjct: 235 DGTPLAVYA-PSGLEEQGEYALHASEKILPYYNNYFGVKYPLPQ--MDMVAIPGNYQAGA 291

Query: 444 RDQ---KVWVMNIVPIDSPD----TLPIVYERGLFGMYHDW 545
            +      ++ N++  D P+    T  ++YE     M H W
Sbjct: 292 MENWGLLTYIDNVLLFDPPNSTPRTRELIYEVVAHEMAHQW 332

>SCG2_RANRI (P30945) Secretogranin-2 precursor (Secretogranin II) (SgII)|
           [Contains: Secretoneurin (SN) (Brain peptide)]
          Length = 601

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +1

Query: 214 QNGQRCGLKGLRRLPSGLMVLVLEFMENQRMKTSR 318
           Q  Q   +K L+RLPS  M+  LE++EN R + SR
Sbjct: 37  QQDQEYRMKTLQRLPSPDMLKALEYIENLRKQASR 71

>RP54_PSEAE (P49988) RNA polymerase sigma-54 factor|
          Length = 497

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
 Frame = +3

Query: 66  QKPMDNNCYEKRSED------SPPLCKETDDADAAWNVPLQACIPK--LPPGPSVRGSKW 221
           Q+ +++N   +R ED      S PL    D A+ A + P ++ + +   P   S+   +W
Sbjct: 38  QEALESNPMLERQEDGDDFDNSDPLA---DGAEQAASAPQESPLQESATPSVESLDDDQW 94

Query: 222 PEMWPQRLEKTPFWIDGSRVGVYGKPANEDFEADY 326
            E  P  L     W D  +      P+N+D E D+
Sbjct: 95  SERIPSELPVDTAWEDIYQTSASSLPSNDDDEWDF 129

>JPH4_MOUSE (Q80WT0) Junctophilin-4 (Junctophilin-like 1 protein)|
          Length = 628

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
 Frame = +3

Query: 102 SEDSPPLCKETDDADAAWNVPLQACIPKLPP----GPSVRGSKWPEMW 233
           SE SP L      +   W  P  AC   LPP    GP      WPE W
Sbjct: 454 SEGSPELPSSPASSHQPWRAP--ACRSPLPPGGNWGPFSSPKAWPEEW 499

>CM4T_STRPE (Q06528) Carminomycin 4-O-methyltransferase (EC 2.1.1.-) (COMT)|
          Length = 355

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 378 DWSKVRNVMDMRAVYGGFAAAL 443
           DW+ VR+V+D+    GGFAAA+
Sbjct: 175 DWTNVRHVLDVGGGKGGFAAAI 196

>3MG2_ECOLI (P04395) DNA-3-methyladenine glycosylase 2 (EC 3.2.2.21)|
           (DNA-3-methyladenine glycosylase II)
           (3-methyladenine-DNA glycosylase II, inducible) (TAG II)
           (DNA-3-methyladenine glycosidase II)
          Length = 282

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = -2

Query: 371 HAIHIRLTYNTFPVCIVCLEVFIRWFSINSNTRTINPEGSLLKPLRPHL 225
           H +HI L+    PV   CL    R F +  N + +N     L   RP L
Sbjct: 57  HTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGL 105

>TSEAR_HUMAN (Q8WU66) Protein TSPEAR precursor (TSP-EAR)|
          Length = 669

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
 Frame = +3

Query: 102 SEDSPPLCKETDDADAAWNVP--LQAC--------IPKLPPGPSVRGSKWPEMWPQRLEK 251
           S+ +P LC   +   A  ++P  LQA         + K P   ++R +  P+     +E 
Sbjct: 223 SDATPRLCPSRNAPLAVLSIPRVLQALTGKPEDNEVLKYPYETNIRVTLGPQPPCTEVED 282

Query: 252 TPFWIDGSRVGVYGKPANE 308
             FW D SR G+Y    NE
Sbjct: 283 AQFWFDASRKGLYLCVGNE 301

>NHR47_CAEEL (Q17370) Nuclear hormone receptor family member nhr-47|
          Length = 579

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 459 WVMNIVPIDSPDTLPIVYERGLFGMYHDWCESFST 563
           W  N+V  +  D LP   +R L  +Y DW ++FST
Sbjct: 190 WSDNVVLTNRDDKLPFWRQR-LIALYIDWAKTFST 223

>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3511

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
 Frame = +3

Query: 180  PKLPPGPSVRGSKWPEMWPQRLEKTPFWIDGSRVGVYGKPANEDFEADYAH---WKRVVS 350
            P+  P P     +WP +WP   +    W   SR+  Y   ++        H   WK+   
Sbjct: 1126 PEQGPAPQACSLRWPCLWPP-TDAHCLW---SRIRTYSSQSHLRGHGGDCHKSLWKKTRP 1181

Query: 351  KSYVNGMGIDWSKVRNVMDMRA 416
            +S+ N M      +RN+  MR+
Sbjct: 1182 QSWQNKM----HSIRNLPSMRS 1199

>MYCD_HUMAN (Q8IZQ8) Myocardin|
          Length = 938

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
 Frame = -2

Query: 563 SAERFAPVMIHSKQATLINNGQCVRRIDWHDIHNPDFLVPQCCSKTSVYGSHVHDISHF- 387
           S+    P    + Q   + N  CV   D  ++ +  FL PQC  + S  G+ V    H  
Sbjct: 592 SSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGA-VKSPQHIS 650

Query: 386 ---GPVNPH 369
               P NPH
Sbjct: 651 LPPSPNNPH 659

>JPH4_HUMAN (Q96JJ6) Junctophilin-4 (Junctophilin-like 1 protein)|
          Length = 628

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
 Frame = +3

Query: 102 SEDSPPLCKETDDADAAWNVPLQACIPKLPP----GPSVRGSKWPEMW 233
           SE SP L      +   W  P  AC   LPP    GP      WPE W
Sbjct: 454 SEGSPELPSSPASSRQPWRPP--ACRSPLPPGGDQGPFSSPKAWPEEW 499


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,640,599
Number of Sequences: 219361
Number of extensions: 2120790
Number of successful extensions: 6021
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6020
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)