ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags21i23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009629.1| Triticum aestivum clone wre1n.pk168.h11:fis, full... 979 0.0
2gb|AY108579.1| Zea mays PCO102927 mRNA sequence 537 e-149
3dbj|AK120113.1| Oryza sativa (japonica cultivar-group) cDNA clon... 531 e-148
4dbj|AK060718.1| Oryza sativa (japonica cultivar-group) cDNA clon... 523 e-145
5gb|AY111909.1| Zea mays CL491_-2 mRNA sequence 442 e-121
6gb|AF297643.1|AF297643 Cucumis melo mitochondrial processing pep... 208 1e-50
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 202 9e-49
8gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare str... 202 9e-49
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 202 9e-49
10emb|X80237.1|STBIMPP S.tuberosum mRNA for beta-I MPP 165 2e-37
11gb|AF363285.1|AF363285 Avicennia marina mitochondrial processing... 163 8e-37
12ref|NM_111075.2| Arabidopsis thaliana MPPBETA; metalloendopeptid... 153 8e-34
13ref|NM_180169.1| Arabidopsis thaliana MPPBETA; metalloendopeptid... 153 8e-34
14gb|BT000830.1| Arabidopsis thaliana putative mitochondrial proce... 153 8e-34
15gb|BT000662.1| Arabidopsis thaliana clone RAFL07-09-O22 (R10705)... 153 8e-34
16gb|AY057579.1| Arabidopsis thaliana At3g02090 mRNA sequence 153 8e-34
17gb|AY126990.1| Arabidopsis thaliana AT3g02090/F1C9_12 mRNA, comp... 153 8e-34
18emb|BX823363.1|CNS0A4RL Arabidopsis thaliana Full-length cDNA Co... 153 8e-34
19gb|BT001915.1| Arabidopsis thaliana clone C105149 putative mitoc... 153 8e-34
20gb|AY656733.1| Vitis vinifera clone 5-3 powdery mildew-resistant... 113 7e-22
21emb|BX825296.1|CNS0A4ZN Arabidopsis thaliana Full-length cDNA Co... 109 1e-20
22gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BA... 88 4e-14
23gb|DQ284488.1| Solanum tuberosum clone 028E08 mitochondrial proc... 76 1e-10
24gb|BT013728.1| Lycopersicon esculentum clone 132587R, mRNA sequence 68 3e-08
25emb|X80235.1|STBIIMPP S.tuberosum mRNA for beta-II MPP 68 3e-08
26gb|AC124191.4| Mus musculus BAC clone RP23-275E4 from 18, comple... 44 0.50
27emb|AL136146.10| Human DNA sequence from clone RP5-916O11 on chr... 42 2.0
28gb|AC026269.26| Homo sapiens chromosome 11, clone RP11-745E9, co... 42 2.0
29gb|AE014133.1| Streptococcus mutans UA159, complete genome 42 2.0
30dbj|AB010699.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.0
31ref|XM_511581.1| PREDICTED: Pan troglodytes hypothetical protein... 40 7.8
32gb|AC099884.12| Mus musculus chromosome 15, clone RP23-11F24, co... 40 7.8
33gb|AC154426.2| Mus musculus BAC clone RP24-199A21 from chromosom... 40 7.8
34gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 40 7.8
35gb|AC120877.15| Mus musculus chromosome 6, clone RP24-548D19, co... 40 7.8
36gb|AC110247.9| Mus musculus chromosome 1, clone RP23-254H20, com... 40 7.8
37gb|AC119846.14| Mus musculus chromosome 1, clone RP23-45A13, com... 40 7.8
38gb|AC101729.8| Mus musculus chromosome 1, clone RP23-362J21, com... 40 7.8
39gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 7.8
40gb|AC102663.6| Mus musculus chromosome 6, clone RP23-244M15, com... 40 7.8
41gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete seq... 40 7.8
42emb|AL590995.14| Human DNA sequence from clone RP11-475B22 on ch... 40 7.8
43emb|AL391821.7| Human DNA sequence from clone RP11-212B22 on chr... 40 7.8
44ref|XM_966541.1| PREDICTED: Tribolium castaneum similar to CG550... 40 7.8
45emb|X72832.1|SEDEXB S.equisimilis dexb, abc, lrp, skc, rel genes... 40 7.8
46emb|BX004761.10| Zebrafish DNA sequence from clone DKEY-11I10 in... 40 7.8
47emb|BX296553.6| Zebrafish DNA sequence from clone CH211-222G19 i... 40 7.8
48gb|AC022819.8| Homo sapiens chromosome 15, clone RP11-41I15, com... 40 7.8
49gb|AC037479.9| Homo sapiens chromosome 15, clone RP11-616M17, co... 40 7.8
50gb|AC010314.6| Homo sapiens chromosome 5 clone CTB-83L16, comple... 40 7.8
51gb|AE006470.1| Chlorobium tepidum TLS, complete genome 40 7.8
52dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
53ref|XM_575971.1| PREDICTED: Rattus norvegicus similar to hypothe... 40 7.8
54dbj|AK068475.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
55gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 40 7.8
56gb|AC101789.9| Mus musculus chromosome 1, clone RP24-150F11, com... 40 7.8
57gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
58emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.8

>gb|BT009629.1| Triticum aestivum clone wre1n.pk168.h11:fis, full insert mRNA
           sequence
          Length = 1391

 Score =  979 bits (494), Expect = 0.0
 Identities = 551/570 (96%)
 Strand = Plus / Plus

                                                                       
Query: 8   gtatacttctcttggcaggccaatcttgggttctgctgataacgtcaagtctatcaccaa 67
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gtatacttctcttggcaggccaatcttgggttctgctgataacgtcaagtctatcaccaa 201

                                                                       
Query: 68  aaaggatctcgtagactacattcaaaatcattacacggcttctagaatggttattactgc 127
           |||| ||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 202 aaagaatctcatagactacattcaaaagcattacacggcttctagaatggtcattactgc 261

                                                                       
Query: 128 tgctggtgctgttaagcatgatgatattgtacaacaggcaaaagagctgttcaaaacgct 187
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 262 tgctggtgctgttaagcatgatgatattgtacagcaggcaaaagagctgttcaaatcgct 321

                                                                       
Query: 188 gccaactgaccctacaacaaccaacatgttggttgctaagcagccagccatttttactgg 247
           ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||
Sbjct: 322 gccaactgaccctacaacaactaacatgttggttgctgaacagccagccatttttactgg 381

                                                                       
Query: 248 ttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgttgccttcaa 307
           |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 382 ttctgaggtacgaatcattgatgatgacatgcccctggcccaatttgctgttgccttcaa 441

                                                                       
Query: 308 tggagcatcctggacagatcccgattctattgcattaatggttatgcaaaccatgcttgg 367
           ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 442 tggagcatcctggacagatcctgattctattgcattaatggttatgcaaactatgcttgg 501

                                                                       
Query: 368 ttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgtacagagagt 427
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttcgtggaacaagagtgctggaggagggaagcacatgggttcggagcttgtacagagagt 561

                                                                       
Query: 428 agcaatcaatgacatagctgagagtataatggcattcaacacaaactataaggacactgg 487
           |||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 562 agcaatcaatgaaatagctgagagtataatggcattcaatacaaactacaaggacactgg 621

                                                                       
Query: 488 cctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgatttggcttttgcaat 547
           |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 622 cctgtttggtgtctatgctgtcgctaaggctgattgcttggatgatttggcttttgcaat 681

                                         
Query: 548 tatgcaagagatgagcaaattatcatacag 577
           ||||||||||||||||||||||||||||||
Sbjct: 682 tatgcaagagatgagcaaattatcatacag 711



to top

>gb|AY108579.1| Zea mays PCO102927 mRNA sequence
          Length = 2137

 Score =  537 bits (271), Expect = e-149
 Identities = 493/567 (86%)
 Strand = Plus / Plus

                                                                        
Query: 9    tatacttctcttggcaggccaatcttgggttctgctgataacgtcaagtctatcaccaaa 68
            ||||| || |||||||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 888  tatacatcccttggcagaccaatcttgggttctgcagataacgtcaagtcaatcaccaaa 947

                                                                        
Query: 69   aaggatctcgtagactacattcaaaatcattacacggcttctagaatggttattactgct 128
             |||| ||||   ||||||||  || |||||| || ||||||||||||||||| || |||
Sbjct: 948  gaggacctcgagaactacattgcaactcattatacagcttctagaatggttatcacagct 1007

                                                                        
Query: 129  gctggtgctgttaagcatgatgatattgtacaacaggcaaaagagctgttcaaaacgctg 188
            || ||   |||||| ||||| || |||||  | ||||||||  || ||||||  | ||| 
Sbjct: 1008 gcaggcaatgttaaacatgaagacattgttgagcaggcaaagaagttgttcagcaagcta 1067

                                                                        
Query: 189  ccaactgaccctacaacaaccaacatgttggttgctaagcagccagccatttttactggt 248
             ||||||||||||||||||| |||||||||||  ||||||||||||||  ||| ||||||
Sbjct: 1068 tcaactgaccctacaacaacaaacatgttggtctctaagcagccagcctctttcactggt 1127

                                                                        
Query: 249  tctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgttgccttcaat 308
            |||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 1128 tctgaggttcgaatcattgatgatgacatgcccctcgctcaatttgctgttgctttcaat 1187

                                                                        
Query: 309  ggagcatcctggacagatcccgattctattgcattaatggttatgcaaaccatgcttggt 368
            |||||||| |||   ||||| |||||| ||||| | |||||||||||||| |||||||||
Sbjct: 1188 ggagcatcatgggtggatcctgattctgttgcactgatggttatgcaaacaatgcttggt 1247

                                                                        
Query: 369  tcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgtacagagagta 428
            || ||||||||||||||||| ||||| |||||||||||||| |||||||| ||||| | |
Sbjct: 1248 tcatggaacaagagtgctggtggaggaaagcacatgggttcagagcttgtgcagagggca 1307

                                                                        
Query: 429  gcaatcaatgacatagctgagagtataatggcattcaacacaaactataaggacactggc 488
            |||||||||||||| ||||||||| |||||| |||||| || || || ||||||||||| 
Sbjct: 1308 gcaatcaatgacatcgctgagagtgtaatgggattcaatacgaattacaaggacactggt 1367

                                                                        
Query: 489  ctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgatttggcttttgcaatt 548
            || |||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 1368 ctttttggtgtctatgctgttgctaaggctgattgcttggatgatttggcttttgcaatt 1427

                                       
Query: 549  atgcaagagatgagcaaattatcatac 575
            ||||| |||||||||||||| ||||||
Sbjct: 1428 atgcatgagatgagcaaattgtcatac 1454



to top

>dbj|AK120113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025E12, full
            insert sequence
          Length = 2166

 Score =  531 bits (268), Expect = e-148
 Identities = 490/564 (86%)
 Strand = Plus / Plus

                                                                        
Query: 12   acttctcttggcaggccaatcttgggttctgctgataacgtcaagtctatcaccaaaaag 71
            |||||||||||||| ||||||||||||||||| || || |||||||| || ||| || ||
Sbjct: 903  acttctcttggcagaccaatcttgggttctgcagaaaatgtcaagtcaattacccaagag 962

                                                                        
Query: 72   gatctcgtagactacattcaaaatcattacacggcttctagaatggttattactgctgct 131
            || |||    | || ||| |||  ||||| |||||| ||||||||||||| |||||||||
Sbjct: 963  gacctccagaagtatattgaaacacattatacggctcctagaatggttatcactgctgct 1022

                                                                        
Query: 132  ggtgctgttaagcatgatgatattgtacaacaggcaaaagagctgttcaaaacgctgcca 191
            ||||||||||||||||||||||||||| |   ||||| | | ||||| ||    || |||
Sbjct: 1023 ggtgctgttaagcatgatgatattgtagagatggcaacaaaactgtttaatgacctacca 1082

                                                                        
Query: 192  actgaccctacaacaaccaacatgttggttgctaagcagccagccatttttactggttct 251
            ||||||||||||||||| | |||||||||| |||  || ||||||   ||||||||||||
Sbjct: 1083 actgaccctacaacaacaagcatgttggtttctacccaaccagcctgctttactggttct 1142

                                                                        
Query: 252  gaggtacgaatcattgatgatgacatgccccttgctcaatttgctgttgccttcaatgga 311
            ||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1143 gaggtccgcatcattgatgatgacatgccccttgctcaatttgctgttgcctttaatgga 1202

                                                                        
Query: 312  gcatcctggacagatcccgattctattgcattaatggttatgcaaaccatgcttggttcc 371
            ||||| |||| |||||| ||||||||||| || ||||| |||||| |||||||||| || 
Sbjct: 1203 gcatcatggatagatcctgattctattgccttgatggtcatgcaatccatgcttggctca 1262

                                                                        
Query: 372  tggaacaagagtgctggaggagggaagcacatgggttcggagcttgtacagagagtagca 431
            |||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||| 
Sbjct: 1263 tggaacaagagtgctggaggagggaaacacatgggttcagagcttgtacaaagggtagcg 1322

                                                                        
Query: 432  atcaatgacatagctgagagtataatggcattcaacacaaactataaggacactggcctg 491
            ||||||||||| |||||||||||||||||||| || ||||| || |||||||||||||| 
Sbjct: 1323 atcaatgacattgctgagagtataatggcatttaatacaaattacaaggacactggcctc 1382

                                                                        
Query: 492  tttggtgtgtatgctgtcgctaagcctgattgcttggatgatttggcttttgcaattatg 551
            |||||||| || ||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 1383 tttggtgtctacgctgttgctaagcctgactgcttggatgatttggcttttgcaatcatg 1442

                                    
Query: 552  caagagatgagcaaattatcatac 575
            |||||||| |||||| | ||||||
Sbjct: 1443 caagagattagcaaactgtcatac 1466



to top

>dbj|AK060718.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E10, full
           insert sequence
          Length = 1410

 Score =  523 bits (264), Expect = e-145
 Identities = 489/564 (86%)
 Strand = Plus / Plus

                                                                       
Query: 12  acttctcttggcaggccaatcttgggttctgctgataacgtcaagtctatcaccaaaaag 71
           |||||||||||||| ||||||||||||||||| || || |||||||| || ||| || ||
Sbjct: 146 acttctcttggcagaccaatcttgggttctgcagaaaatgtcaagtcaattacccaagag 205

                                                                       
Query: 72  gatctcgtagactacattcaaaatcattacacggcttctagaatggttattactgctgct 131
           || |||    | || ||| |||  ||||| |||||| ||||||||||||| |||||||||
Sbjct: 206 gacctccagaagtatattgaaacacattatacggctcctagaatggttatcactgctgct 265

                                                                       
Query: 132 ggtgctgttaagcatgatgatattgtacaacaggcaaaagagctgttcaaaacgctgcca 191
           ||||||||||||||||||||||||||| |   ||||| | | ||||| ||    || |||
Sbjct: 266 ggtgctgttaagcatgatgatattgtagagatggcaacaaaactgtttaatgacctacca 325

                                                                       
Query: 192 actgaccctacaacaaccaacatgttggttgctaagcagccagccatttttactggttct 251
           ||||||||||||||||| | |||||||||| |||  || ||||||   ||||||||||||
Sbjct: 326 actgaccctacaacaacaagcatgttggtttctacccaaccagcctgctttactggttct 385

                                                                       
Query: 252 gaggtacgaatcattgatgatgacatgccccttgctcaatttgctgttgccttcaatgga 311
           ||||| || |||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 386 gaggtccgcatcattgatggtgacatgccccttgctcaatttgctgttgcctttaatgga 445

                                                                       
Query: 312 gcatcctggacagatcccgattctattgcattaatggttatgcaaaccatgcttggttcc 371
           ||||| |||| |||||| ||||||||||| || ||||| |||||| |||||||||| || 
Sbjct: 446 gcatcatggatagatcctgattctattgccttgatggtcatgcaatccatgcttggctca 505

                                                                       
Query: 372 tggaacaagagtgctggaggagggaagcacatgggttcggagcttgtacagagagtagca 431
           |||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||| 
Sbjct: 506 tggaacaagagtgctggaggagggaaacacatgggttcagagcttgtacaaagggtagcg 565

                                                                       
Query: 432 atcaatgacatagctgagagtataatggcattcaacacaaactataaggacactggcctg 491
           ||||||||||| |||||||||||||||||||| || ||||| || |||||||||||||| 
Sbjct: 566 atcaatgacattgctgagagtataatggcatttaatacaaattacaaggacactggcctc 625

                                                                       
Query: 492 tttggtgtgtatgctgtcgctaagcctgattgcttggatgatttggcttttgcaattatg 551
           |||||||| || ||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 626 tttggtgtctacgctgttgctaagcctgactgcttggatgatttggcttttgcaatcatg 685

                                   
Query: 552 caagagatgagcaaattatcatac 575
           |||||||| |||||| | ||||||
Sbjct: 686 caagagattagcaaactgtcatac 709



to top

>gb|AY111909.1| Zea mays CL491_-2 mRNA sequence
          Length = 584

 Score =  442 bits (223), Expect = e-121
 Identities = 344/386 (89%)
 Strand = Plus / Plus

                                                                       
Query: 190 caactgaccctacaacaaccaacatgttggttgctaagcagccagccatttttactggtt 249
           ||||||||||||||||||| ||||||||||| |||||||| ||||||  ||| || ||||
Sbjct: 39  caactgaccctacaacaacaaacatgttggtcgctaagcaaccagcctctttcacgggtt 98

                                                                       
Query: 250 ctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgttgccttcaatg 309
           ||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 99  ctgaggttcgaatcattgacgatgacatgccccttgctcaatttgctgttgctttcaatg 158

                                                                       
Query: 310 gagcatcctggacagatcccgattctattgcattaatggttatgcaaaccatgcttggtt 369
           ||||||| |||  |||||| |||||| ||||| | |||||||||||| | ||||||||||
Sbjct: 159 gagcatcatgggtagatcctgattctgttgcactgatggttatgcaatcaatgcttggtt 218

                                                                       
Query: 370 cctggaacaagagtgctggaggagggaagcacatgggttcggagcttgtacagagagtag 429
           | ||||||||||||||||| ||||| |||||||||||||||||||||||||||| || ||
Sbjct: 219 catggaacaagagtgctggtggaggaaagcacatgggttcggagcttgtacagaaagcag 278

                                                                       
Query: 430 caatcaatgacatagctgagagtataatggcattcaacacaaactataaggacactggcc 489
           ||||||||||||| ||||||||| ||||| |||||||||  || || ||||||||||| |
Sbjct: 279 caatcaatgacattgctgagagtgtaatgtcattcaacatgaattacaaggacactggtc 338

                                                                       
Query: 490 tgtttggtgtgtatgctgtcgctaagcctgattgcttggatgatttggcttttgcaatta 549
                ||||| |||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 339 nnnnnggtgtctatgctgttgctaaggctgattgcttggatgatttggcttttgcaatta 398

                                     
Query: 550 tgcaagagatgagcaaattatcatac 575
           |||| |||||||||||||| ||||||
Sbjct: 399 tgcatgagatgagcaaattgtcatac 424



to top

>gb|AF297643.1|AF297643 Cucumis melo mitochondrial processing peptidase beta subunit mRNA,
            complete cds; nuclear gene for mitochondrial product
          Length = 1906

 Score =  208 bits (105), Expect = 1e-50
 Identities = 276/333 (82%)
 Strand = Plus / Plus

                                                                        
Query: 215  gttggttgctaagcagccagccatttttactggttctgaggtacgaatcattgatgatga 274
            ||||||||| ||| ||||||| ||||||||||| || ||||| || ||  ||||||| ||
Sbjct: 966  gttggttgcaaaggagccagcaatttttactggctccgaggttcggatagttgatgacga 1025

                                                                        
Query: 275  catgccccttgctcaatttgctgttgccttcaatggagcatcctggacagatcccgattc 334
              | ||| | |||||||||||| |||| || ||||||||||||||||||||||| || ||
Sbjct: 1026 tgttcccttggctcaatttgctattgcttttaatggagcatcctggacagatccagactc 1085

                                                                        
Query: 335  tattgcattaatggttatgcaaaccatgcttggttcctggaacaagagtgctggaggagg 394
             |||||  | ||||| |||||| | ||| | ||||||||||| || ||||||||||| ||
Sbjct: 1086 cattgccctgatggtcatgcaagctatgttgggttcctggaataaaagtgctggaggtgg 1145

                                                                        
Query: 395  gaagcacatgggttcggagcttgtacagagagtagcaatcaatgacatagctgagagtat 454
             ||||| |||||||| ||||| |  || ||||| || ||||||||  |||| || |||||
Sbjct: 1146 aaagcatatgggttctgagctggcccaaagagttgccatcaatgaggtagcagaaagtat 1205

                                                                        
Query: 455  aatggcattcaacacaaactataaggacactggcctgtttggtgtgtatgctgtcgctaa 514
             ||||| |||||||| || || ||||||||||| || |||||||| |||||||| || ||
Sbjct: 1206 gatggctttcaacaccaattacaaggacactggtctttttggtgtctatgctgttgcaaa 1265

                                             
Query: 515  gcctgattgcttggatgatttggcttttgcaat 547
            |||||| ||||||||||||||||||| ||||||
Sbjct: 1266 gcctgactgcttggatgatttggcttatgcaat 1298



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 111 agaatggttattactgctgctggtgctgttaagcatgatgatattgt 157
           |||||||||||| ||||| | || |||||||||||||| ||| ||||
Sbjct: 862 agaatggttattgctgcttccggagctgttaagcatgaggattttgt 908



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  202 bits (102), Expect = 9e-49
 Identities = 135/146 (92%)
 Strand = Plus / Plus

                                                                           
Query: 261     atcattgatgatgacatgccccttgctcaatttgctgttgccttcaatggagcatcctgg 320
               |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 5840289 atcattgatgatgacatgccccttgctcaatttgctgttgcctttaatggagcatcatgg 5840348

                                                                           
Query: 321     acagatcccgattctattgcattaatggttatgcaaaccatgcttggttcctggaacaag 380
               | |||||| ||||||||||| || ||||| |||||| |||||||||| || |||||||||
Sbjct: 5840349 atagatcctgattctattgccttgatggtcatgcaatccatgcttggctcatggaacaag 5840408

                                         
Query: 381     agtgctggaggagggaagcacatggg 406
               ||||||||||||||||| ||||||||
Sbjct: 5840409 agtgctggaggagggaaacacatggg 5840434



 Score =  115 bits (58), Expect = 2e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                           
Query: 406     gttcggagcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattca 465
               |||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||||| |
Sbjct: 5840540 gttcagagcttgtacaaagggtagcgatcaatgacattgctgagagtataatggcattta 5840599

                                                                 
Query: 466     acacaaactataaggacactggcctgtttggtgtgtatgctgtcgctaag 515
               | ||||| || |||||||||||||| |||||||| || ||||| ||||||
Sbjct: 5840600 atacaaattacaaggacactggcctctttggtgtctacgctgttgctaag 5840649



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 118/141 (83%)
 Strand = Plus / Plus

                                                                           
Query: 116     ggttattactgctgctggtgctgttaagcatgatgatattgtacaacaggcaaaagagct 175
               |||||| |||||||||||||||||||||||||||||||||||| |   ||||| | | ||
Sbjct: 5840075 ggttatcactgctgctggtgctgttaagcatgatgatattgtagagatggcaacaaaact 5840134

                                                                           
Query: 176     gttcaaaacgctgccaactgaccctacaacaaccaacatgttggttgctaagcagccagc 235
               ||| ||    || |||||||||||||||||||| | |||||||||| |||  || |||||
Sbjct: 5840135 gtttaatgacctaccaactgaccctacaacaacaagcatgttggtttctacccaaccagc 5840194

                                    
Query: 236     catttttactggttctgaggt 256
               |   |||||||||||||||||
Sbjct: 5840195 ctgctttactggttctgaggt 5840215



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                           
Query: 514     agcctgattgcttggatgatttggcttttgcaattatgcaagagatgagcaaattatcat 573
               ||||||| |||||||||||||||||||||||||| ||||||||||| |||||| | ||||
Sbjct: 5841336 agcctgactgcttggatgatttggcttttgcaatcatgcaagagattagcaaactgtcat 5841395

                 
Query: 574     ac 575
               ||
Sbjct: 5841396 ac 5841397



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                              
Query: 12      acttctcttggcaggccaatcttgggttctgctgataacgtcaagtc 58
               |||||||||||||| ||||||||||||||||| || || ||||||||
Sbjct: 5839847 acttctcttggcagaccaatcttgggttctgcagaaaatgtcaagtc 5839893



to top

>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0021B21, from chromosome 3, complete sequence
          Length = 139208

 Score =  202 bits (102), Expect = 9e-49
 Identities = 135/146 (92%)
 Strand = Plus / Plus

                                                                         
Query: 261   atcattgatgatgacatgccccttgctcaatttgctgttgccttcaatggagcatcctgg 320
             |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 69119 atcattgatgatgacatgccccttgctcaatttgctgttgcctttaatggagcatcatgg 69178

                                                                         
Query: 321   acagatcccgattctattgcattaatggttatgcaaaccatgcttggttcctggaacaag 380
             | |||||| ||||||||||| || ||||| |||||| |||||||||| || |||||||||
Sbjct: 69179 atagatcctgattctattgccttgatggtcatgcaatccatgcttggctcatggaacaag 69238

                                       
Query: 381   agtgctggaggagggaagcacatggg 406
             ||||||||||||||||| ||||||||
Sbjct: 69239 agtgctggaggagggaaacacatggg 69264



 Score =  115 bits (58), Expect = 2e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                         
Query: 406   gttcggagcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattca 465
             |||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||||| |
Sbjct: 69370 gttcagagcttgtacaaagggtagcgatcaatgacattgctgagagtataatggcattta 69429

                                                               
Query: 466   acacaaactataaggacactggcctgtttggtgtgtatgctgtcgctaag 515
             | ||||| || |||||||||||||| |||||||| || ||||| ||||||
Sbjct: 69430 atacaaattacaaggacactggcctctttggtgtctacgctgttgctaag 69479



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 118/141 (83%)
 Strand = Plus / Plus

                                                                         
Query: 116   ggttattactgctgctggtgctgttaagcatgatgatattgtacaacaggcaaaagagct 175
             |||||| |||||||||||||||||||||||||||||||||||| |   ||||| | | ||
Sbjct: 68905 ggttatcactgctgctggtgctgttaagcatgatgatattgtagagatggcaacaaaact 68964

                                                                         
Query: 176   gttcaaaacgctgccaactgaccctacaacaaccaacatgttggttgctaagcagccagc 235
             ||| ||    || |||||||||||||||||||| | |||||||||| |||  || |||||
Sbjct: 68965 gtttaatgacctaccaactgaccctacaacaacaagcatgttggtttctacccaaccagc 69024

                                  
Query: 236   catttttactggttctgaggt 256
             |   |||||||||||||||||
Sbjct: 69025 ctgctttactggttctgaggt 69045



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                         
Query: 514   agcctgattgcttggatgatttggcttttgcaattatgcaagagatgagcaaattatcat 573
             ||||||| |||||||||||||||||||||||||| ||||||||||| |||||| | ||||
Sbjct: 70166 agcctgactgcttggatgatttggcttttgcaatcatgcaagagattagcaaactgtcat 70225

               
Query: 574   ac 575
             ||
Sbjct: 70226 ac 70227



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 12    acttctcttggcaggccaatcttgggttctgctgataacgtcaagtc 58
             |||||||||||||| ||||||||||||||||| || || ||||||||
Sbjct: 68677 acttctcttggcagaccaatcttgggttctgcagaaaatgtcaagtc 68723



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  202 bits (102), Expect = 9e-49
 Identities = 135/146 (92%)
 Strand = Plus / Plus

                                                                           
Query: 261     atcattgatgatgacatgccccttgctcaatttgctgttgccttcaatggagcatcctgg 320
               |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 5839502 atcattgatgatgacatgccccttgctcaatttgctgttgcctttaatggagcatcatgg 5839561

                                                                           
Query: 321     acagatcccgattctattgcattaatggttatgcaaaccatgcttggttcctggaacaag 380
               | |||||| ||||||||||| || ||||| |||||| |||||||||| || |||||||||
Sbjct: 5839562 atagatcctgattctattgccttgatggtcatgcaatccatgcttggctcatggaacaag 5839621

                                         
Query: 381     agtgctggaggagggaagcacatggg 406
               ||||||||||||||||| ||||||||
Sbjct: 5839622 agtgctggaggagggaaacacatggg 5839647



 Score =  115 bits (58), Expect = 2e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                           
Query: 406     gttcggagcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattca 465
               |||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||||| |
Sbjct: 5839753 gttcagagcttgtacaaagggtagcgatcaatgacattgctgagagtataatggcattta 5839812

                                                                 
Query: 466     acacaaactataaggacactggcctgtttggtgtgtatgctgtcgctaag 515
               | ||||| || |||||||||||||| |||||||| || ||||| ||||||
Sbjct: 5839813 atacaaattacaaggacactggcctctttggtgtctacgctgttgctaag 5839862



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 118/141 (83%)
 Strand = Plus / Plus

                                                                           
Query: 116     ggttattactgctgctggtgctgttaagcatgatgatattgtacaacaggcaaaagagct 175
               |||||| |||||||||||||||||||||||||||||||||||| |   ||||| | | ||
Sbjct: 5839288 ggttatcactgctgctggtgctgttaagcatgatgatattgtagagatggcaacaaaact 5839347

                                                                           
Query: 176     gttcaaaacgctgccaactgaccctacaacaaccaacatgttggttgctaagcagccagc 235
               ||| ||    || |||||||||||||||||||| | |||||||||| |||  || |||||
Sbjct: 5839348 gtttaatgacctaccaactgaccctacaacaacaagcatgttggtttctacccaaccagc 5839407

                                    
Query: 236     catttttactggttctgaggt 256
               |   |||||||||||||||||
Sbjct: 5839408 ctgctttactggttctgaggt 5839428



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                           
Query: 514     agcctgattgcttggatgatttggcttttgcaattatgcaagagatgagcaaattatcat 573
               ||||||| |||||||||||||||||||||||||| ||||||||||| |||||| | ||||
Sbjct: 5840549 agcctgactgcttggatgatttggcttttgcaatcatgcaagagattagcaaactgtcat 5840608

                 
Query: 574     ac 575
               ||
Sbjct: 5840609 ac 5840610



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                              
Query: 12      acttctcttggcaggccaatcttgggttctgctgataacgtcaagtc 58
               |||||||||||||| ||||||||||||||||| || || ||||||||
Sbjct: 5839060 acttctcttggcagaccaatcttgggttctgcagaaaatgtcaagtc 5839106



to top

>emb|X80237.1|STBIMPP S.tuberosum mRNA for beta-I MPP
          Length = 1961

 Score =  165 bits (83), Expect = 2e-37
 Identities = 245/299 (81%)
 Strand = Plus / Plus

                                                                        
Query: 229  agccagccatttttactggttctgaggtacgaatcattgatgatgacatgccccttgctc 288
            ||||||| || ||||| ||||| ||| |||| ||||||||||||||  |||| || ||||
Sbjct: 977  agccagcaatatttacaggttcagagatacgtatcattgatgatgatctgcctctcgctc 1036

                                                                        
Query: 289  aatttgctgttgccttcaatggagcatcctggacagatcccgattctattgcattaatgg 348
            ||||||||||||| || | |||||| || |||||||| || || || || || || ||||
Sbjct: 1037 aatttgctgttgcatttagtggagcgtcatggacagaccctgactccatagctttgatgg 1096

                                                                        
Query: 349  ttatgcaaaccatgcttggttcctggaacaagagtgctggaggagggaagcacatgggtt 408
            | ||||||   ||||| || || |||||||| ||| | |||||||| |||||||||||||
Sbjct: 1097 tcatgcaacaaatgctaggatcatggaacaaaagttcaggaggaggaaagcacatgggtt 1156

                                                                        
Query: 409  cggagcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattcaaca 468
            | |||||||| ||||| || || || |||||  ||||||| ||| | ||||| || ||||
Sbjct: 1157 cagagcttgtccagagggtggccattaatgagctagctgaaagtgtgatggcttttaaca 1216

                                                                       
Query: 469  caaactataaggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttg 527
            | |||||||| || || || ||||||||||| |||||||  ||||||||||||||||||
Sbjct: 1217 ccaactataaagatacagggctgtttggtgtctatgctgaagctaagcctgattgcttg 1275



to top

>gb|AF363285.1|AF363285 Avicennia marina mitochondrial processing peptidase mRNA, complete
            cds; nuclear gene for mitochondrial product
          Length = 1870

 Score =  163 bits (82), Expect = 8e-37
 Identities = 256/314 (81%)
 Strand = Plus / Plus

                                                                        
Query: 238  tttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctg 297
            ||||||||||||| |||||  | ||  | ||||||||||| || ||||| ||||||||||
Sbjct: 1006 tttttactggttcagaggtgaggatgctcgatgatgacattcctcttgcccaatttgctg 1065

                                                                        
Query: 298  ttgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaa 357
            |||||||  | || || || ||||||||||| ||||| ||||| |||||||| |||||  
Sbjct: 1066 ttgcctttgaaggggcttcatggacagatccagattccattgctttaatggtcatgcagt 1125

                                                                        
Query: 358  ccatgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttg 417
            | ||| | ||||| ||||| || | |||||  || || ||||| |||||||| |||||||
Sbjct: 1126 cgatgttaggttcttggaataaaaatgctgttggtggaaagcatatgggttctgagcttg 1185

                                                                        
Query: 418  tacagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactata 477
             ||||||||| |  |||||||| ||||| ||||| || ||||| ||||| || |||||||
Sbjct: 1186 cacagagagttgggatcaatgaaatagccgagagcatgatggctttcaataccaactata 1245

                                                                        
Query: 478  aggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgatttgg 537
            | ||||||||  | |||||||| |||||| | ||||||||||| |||||||| |||||||
Sbjct: 1246 aagacactggtttatttggtgtttatgctattgctaagcctgactgcttggacgatttgg 1305

                          
Query: 538  cttttgcaattatg 551
            | | ||| ||||||
Sbjct: 1306 cctatgcgattatg 1319



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 130 ctggtgctgttaagcatgatgatattgt 157
           ||||||||||||||||||| ||| ||||
Sbjct: 895 ctggtgctgttaagcatgaagattttgt 922



to top

>ref|NM_111075.2| Arabidopsis thaliana MPPBETA; metalloendopeptidase AT3G02090
            (MPPBETA) transcript variant AT3G02090.1 mRNA, complete
            cds
          Length = 2056

 Score =  153 bits (77), Expect = 8e-34
 Identities = 242/297 (81%)
 Strand = Plus / Plus

                                                                        
Query: 239  ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 298
            |||||||||||||||||| ||||| |||||||| ||| | |||||||| |||||||||||
Sbjct: 1035 ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1094

                                                                        
Query: 299  tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 358
            ||||||  | |||||||| ||||| ||||| |||||  ||||  | ||||||||||||||
Sbjct: 1095 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1154

                                                                        
Query: 359  catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 418
             ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || ||   
Sbjct: 1155 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1214

                                                                        
Query: 419  acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 478
             ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| ||
Sbjct: 1215 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1274

                                                                     
Query: 479  ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 535
            ||| ||||| ||||| || || ||||| || || ||| | |||||||||||||||||
Sbjct: 1275 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1331



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 141
           |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || |||||||
Sbjct: 878 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 937

                  
Query: 142 agcatga 148
           |||||||
Sbjct: 938 agcatga 944



to top

>ref|NM_180169.1| Arabidopsis thaliana MPPBETA; metalloendopeptidase AT3G02090
            (MPPBETA) transcript variant AT3G02090.2 mRNA, complete
            cds
          Length = 2060

 Score =  153 bits (77), Expect = 8e-34
 Identities = 242/297 (81%)
 Strand = Plus / Plus

                                                                        
Query: 239  ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 298
            |||||||||||||||||| ||||| |||||||| ||| | |||||||| |||||||||||
Sbjct: 1035 ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1094

                                                                        
Query: 299  tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 358
            ||||||  | |||||||| ||||| ||||| |||||  ||||  | ||||||||||||||
Sbjct: 1095 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1154

                                                                        
Query: 359  catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 418
             ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || ||   
Sbjct: 1155 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1214

                                                                        
Query: 419  acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 478
             ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| ||
Sbjct: 1215 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1274

                                                                     
Query: 479  ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 535
            ||| ||||| ||||| || || ||||| || || ||| | |||||||||||||||||
Sbjct: 1275 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1331



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 141
           |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || |||||||
Sbjct: 878 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 937

                  
Query: 142 agcatga 148
           |||||||
Sbjct: 938 agcatga 944



to top

>gb|BT000830.1| Arabidopsis thaliana putative mitochondrial processing peptidase
            (At3g02090/F1C9_12) mRNA, complete cds
          Length = 1596

 Score =  153 bits (77), Expect = 8e-34
 Identities = 242/297 (81%)
 Strand = Plus / Plus

                                                                        
Query: 239  ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 298
            |||||||||||||||||| ||||| |||||||| ||| | |||||||| |||||||||||
Sbjct: 960  ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1019

                                                                        
Query: 299  tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 358
            ||||||  | |||||||| ||||| ||||| |||||  ||||  | ||||||||||||||
Sbjct: 1020 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1079

                                                                        
Query: 359  catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 418
             ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || ||   
Sbjct: 1080 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1139

                                                                        
Query: 419  acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 478
             ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| ||
Sbjct: 1140 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1199

                                                                     
Query: 479  ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 535
            ||| ||||| ||||| || || ||||| || || ||| | |||||||||||||||||
Sbjct: 1200 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1256



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 141
           |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || |||||||
Sbjct: 803 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 862

                  
Query: 142 agcatga 148
           |||||||
Sbjct: 863 agcatga 869



to top

>gb|BT000662.1| Arabidopsis thaliana clone RAFL07-09-O22 (R10705) putative
            mitochondrial processing peptidase (At3g02090) mRNA,
            complete cds
          Length = 2036

 Score =  153 bits (77), Expect = 8e-34
 Identities = 242/297 (81%)
 Strand = Plus / Plus

                                                                        
Query: 239  ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 298
            |||||||||||||||||| ||||| |||||||| ||| | |||||||| |||||||||||
Sbjct: 1023 ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1082

                                                                        
Query: 299  tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 358
            ||||||  | |||||||| ||||| ||||| |||||  ||||  | ||||||||||||||
Sbjct: 1083 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1142

                                                                        
Query: 359  catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 418
             ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || ||   
Sbjct: 1143 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1202

                                                                        
Query: 419  acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 478
             ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| ||
Sbjct: 1203 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1262

                                                                     
Query: 479  ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 535
            ||| ||||| ||||| || || ||||| || || ||| | |||||||||||||||||
Sbjct: 1263 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1319



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 141
           |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || |||||||
Sbjct: 866 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 925

                  
Query: 142 agcatga 148
           |||||||
Sbjct: 926 agcatga 932



to top

>gb|AY057579.1| Arabidopsis thaliana At3g02090 mRNA sequence
          Length = 2026

 Score =  153 bits (77), Expect = 8e-34
 Identities = 242/297 (81%)
 Strand = Plus / Plus

                                                                        
Query: 239  ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 298
            |||||||||||||||||| ||||| |||||||| ||| | |||||||| |||||||||||
Sbjct: 1031 ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1090

                                                                        
Query: 299  tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 358
            ||||||  | |||||||| ||||| ||||| |||||  ||||  | ||||||||||||||
Sbjct: 1091 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1150

                                                                        
Query: 359  catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 418
             ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || ||   
Sbjct: 1151 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1210

                                                                        
Query: 419  acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 478
             ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| ||
Sbjct: 1211 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1270

                                                                     
Query: 479  ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 535
            ||| ||||| ||||| || || ||||| || || ||| | |||||||||||||||||
Sbjct: 1271 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1327



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 141
           |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || |||||||
Sbjct: 873 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 932

                  
Query: 142 agcatga 148
           |||||||
Sbjct: 933 agcatga 939



to top

>gb|AY126990.1| Arabidopsis thaliana AT3g02090/F1C9_12 mRNA, complete cds
          Length = 1911

 Score =  153 bits (77), Expect = 8e-34
 Identities = 242/297 (81%)
 Strand = Plus / Plus

                                                                        
Query: 239  ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 298
            |||||||||||||||||| ||||| |||||||| ||| | |||||||| |||||||||||
Sbjct: 1030 ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1089

                                                                        
Query: 299  tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 358
            ||||||  | |||||||| ||||| ||||| |||||  ||||  | ||||||||||||||
Sbjct: 1090 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1149

                                                                        
Query: 359  catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 418
             ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || ||   
Sbjct: 1150 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1209

                                                                        
Query: 419  acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 478
             ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| ||
Sbjct: 1210 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1269

                                                                     
Query: 479  ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 535
            ||| ||||| ||||| || || ||||| || || ||| | |||||||||||||||||
Sbjct: 1270 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1326



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 141
           |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || |||||||
Sbjct: 873 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 932

                  
Query: 142 agcatga 148
           |||||||
Sbjct: 933 agcatga 939



to top

>emb|BX823363.1|CNS0A4RL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS27ZD01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1928

 Score =  153 bits (77), Expect = 8e-34
 Identities = 242/297 (81%)
 Strand = Plus / Plus

                                                                        
Query: 239  ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 298
            |||||||||||||||||| ||||| |||||||| ||| | |||||||| |||||||||||
Sbjct: 1026 ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1085

                                                                        
Query: 299  tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 358
            ||||||  | |||||||| ||||| ||||| |||||  ||||  | ||||||||||||||
Sbjct: 1086 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1145

                                                                        
Query: 359  catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 418
             ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || ||   
Sbjct: 1146 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1205

                                                                        
Query: 419  acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 478
             ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| ||
Sbjct: 1206 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1265

                                                                     
Query: 479  ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 535
            ||| ||||| ||||| || || ||||| || || ||| | |||||||||||||||||
Sbjct: 1266 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1322



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 141
           |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || |||||||
Sbjct: 869 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 928

                  
Query: 142 agcatga 148
           |||||||
Sbjct: 929 agcatga 935



to top

>gb|BT001915.1| Arabidopsis thaliana clone C105149 putative mitochondrial processing
            peptidase (At3g02090) mRNA, complete cds
          Length = 1627

 Score =  153 bits (77), Expect = 8e-34
 Identities = 242/297 (81%)
 Strand = Plus / Plus

                                                                        
Query: 239  ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 298
            |||||||||||||||||| ||||| |||||||| ||| | |||||||| |||||||||||
Sbjct: 960  ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1019

                                                                        
Query: 299  tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 358
            ||||||  | |||||||| ||||| ||||| |||||  ||||  | ||||||||||||||
Sbjct: 1020 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1079

                                                                        
Query: 359  catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 418
             ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || ||   
Sbjct: 1080 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1139

                                                                        
Query: 419  acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 478
             ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| ||
Sbjct: 1140 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1199

                                                                     
Query: 479  ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 535
            ||| ||||| ||||| || || ||||| || || ||| | |||||||||||||||||
Sbjct: 1200 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1256



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 141
           |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || |||||||
Sbjct: 803 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 862

                  
Query: 142 agcatga 148
           |||||||
Sbjct: 863 agcatga 869



to top

>gb|AY656733.1| Vitis vinifera clone 5-3 powdery mildew-resistant-like mRNA,
           partial sequence
          Length = 394

 Score =  113 bits (57), Expect = 7e-22
 Identities = 165/201 (82%)
 Strand = Plus / Minus

                                                                       
Query: 215 gttggttgctaagcagccagccatttttactggttctgaggtacgaatcattgatgatga 274
           ||||||||| ||  ||||||| | ||||||||||||||||||  | || |||||||||||
Sbjct: 213 gttggttgcgaaagagccagctagttttactggttctgaggtcaggattattgatgatga 154

                                                                       
Query: 275 catgccccttgctcaatttgctgttgccttcaatggagcatcctggacagatcccgattc 334
             | || || || |||||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 153 tgtcccactcgcacaatttgctgttgcattcaacggagcctcctggacagatcccgattc 94

                                                                       
Query: 335 tattgcattaatggttatgcaaaccatgcttggttcctggaacaagagtgctggaggagg 394
            ||| | || ||||| ||||| |  || || ||||| ||||| |||| | |||| |||||
Sbjct: 93  cattcctttgatggtcatgcagagtatactgggttcttggaataagaattctggtggagg 34

                                
Query: 395 gaagcacatgggttcggagct 415
            ||||||||||| || |||||
Sbjct: 33  aaagcacatggggtcagagct 13



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 111 agaatggttattactgctgctggtgctgttaagca 145
           |||||||||||| ||||||||||||||||| ||||
Sbjct: 317 agaatggttatttctgctgctggtgctgtttagca 283



to top

>emb|BX825296.1|CNS0A4ZN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL27ZD07 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1939

 Score =  109 bits (55), Expect = 1e-20
 Identities = 233/291 (80%), Gaps = 1/291 (0%)
 Strand = Plus / Plus

                                                                        
Query: 243  actggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgttgcc 302
            |||||||||||||| ||||| |||||||| ||| | ||||| || |||||||||||||||
Sbjct: 1015 actggttctgaggtccgaatgattgatgacgacctacccctagcacaatttgctgttgcc 1074

                                                                        
Query: 303  ttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaaccatg 362
            ||  | |||||||| ||||| ||||| |||||  ||   || ||||||||||| || |||
Sbjct: 1075 tttgagggagcatcttggactgatccagattc-cttttttttatggttatgcatactatg 1133

                                                                        
Query: 363  cttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgtacag 422
             | ||||| |||||||| | || ||| || || || ||| ||||||| || ||    |||
Sbjct: 1134 ttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgacccag 1193

                                                                        
Query: 423  agagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataaggac 482
            || || || || ||||| ||||| || || ||||||||||||||||| ||||| ||||| 
Sbjct: 1194 agggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaaggat 1253

                                                               
Query: 483  actggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgat 533
            ||||| ||||| || || ||||| || || ||| | |||||||||||||||
Sbjct: 1254 actggactgttcggcgtttatgcagttgccaaggccgattgcttggatgat 1304



to top

>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete
             sequence
          Length = 103960

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 110/132 (83%)
 Strand = Plus / Minus

                                                                         
Query: 248   ttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgttgccttcaa 307
             |||| |||| ||||| |||||||| ||| | |||||||| |||||||||||||||||  |
Sbjct: 42084 ttctcaggtccgaatgattgatgacgacctaccccttgcacaatttgctgttgcctttga 42025

                                                                         
Query: 308   tggagcatcctggacagatcccgattctattgcattaatggttatgcaaaccatgcttgg 367
              |||||||| ||||| ||||| |||||  ||||  | |||||||||||||| ||| | ||
Sbjct: 42024 gggagcatcttggactgatccagattccgttgctcttatggttatgcaaactatgttggg 41965

                         
Query: 368   ttcctggaacaa 379
             ||| ||||||||
Sbjct: 41964 ttcgtggaacaa 41953



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                        
Query: 435   aatgacatagctgagagtataatggcattcaacacaaactataaggacactggcctgtt 493
             ||||| ||||| || || ||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 41805 aatgaaatagcagaaagcataatggcattcaacactaactacaaggatactggactgtt 41747



to top

>gb|DQ284488.1| Solanum tuberosum clone 028E08 mitochondrial processing
            peptidase-like mRNA, complete cds; nuclear gene for
            mitochondrial product
          Length = 1761

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 239/306 (78%)
 Strand = Plus / Plus

                                                                        
Query: 231  ccagccatttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaa 290
            ||||| |||||||| ||||| |||||  |  | |||||||||||||| ||  | || |||
Sbjct: 1007 ccagcaatttttacaggttcagaggttagggtaattgatgatgacattccgttggcacaa 1066

                                                                        
Query: 291  tttgctgttgccttcaatggagcatcctggacagatcccgattctattgcattaatggtt 350
            ||||||||||| ||  | || ||| | ||||| ||||| ||| | ||| |  | ||||| 
Sbjct: 1067 tttgctgttgcttttcaaggggcaccatggactgatccagatgccattccgctgatggta 1126

                                                                        
Query: 351  atgcaaaccatgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcg 410
            |||||| ||||||| ||  | ||||| || | ||| ||||||||||| |||||||| || 
Sbjct: 1127 atgcaatccatgctgggaacttggaataaaaatgccggaggagggaaacacatgggctcc 1186

                                                                        
Query: 411  gagcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattcaacaca 470
            || || | ||| || || || || |||||  |||||||||| || ||| | || ||||| 
Sbjct: 1187 gatctggcacaaagtgttgccattaatgaactagctgagagcatgatgtcttttaacacc 1246

                                                                        
Query: 471  aactataaggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggat 530
            || |||||||| ||||| ||||| || ||||||||||| || ||||||||||| |||  |
Sbjct: 1247 aattataaggatactggtctgttcggcgtgtatgctgttgcaaagcctgattgtttgagt 1306

                  
Query: 531  gatttg 536
            ||||||
Sbjct: 1307 gatttg 1312



to top

>gb|BT013728.1| Lycopersicon esculentum clone 132587R, mRNA sequence
          Length = 1778

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 238/306 (77%)
 Strand = Plus / Plus

                                                                        
Query: 231  ccagccatttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaa 290
            ||||| |||||||| ||||| |||||  |  | |||||||||||||| ||  | || |||
Sbjct: 1022 ccagcaatttttacaggttcagaggttagggtaattgatgatgacattccattggcacaa 1081

                                                                        
Query: 291  tttgctgttgccttcaatggagcatcctggacagatcccgattctattgcattaatggtt 350
            ||||||||||| ||  | || ||| | ||||| ||||| ||| | ||| || | ||||| 
Sbjct: 1082 tttgctgttgcttttcaaggggcaccgtggactgatccagatgccattccactgatggta 1141

                                                                        
Query: 351  atgcaaaccatgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcg 410
            |||||| ||||||| ||  | ||||| || | ||| ||||||||||| |||||||| || 
Sbjct: 1142 atgcaatccatgctgggcacttggaataaaaatgccggaggagggaaacacatgggctcc 1201

                                                                        
Query: 411  gagcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattcaacaca 470
            || || | ||| || || |  || |||||  | |||||||| || ||| | || ||||| 
Sbjct: 1202 gatctggcacaaagtgttggcattaatgaacttgctgagagcatgatgtcttttaacacc 1261

                                                                        
Query: 471  aactataaggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggat 530
            ||||||||||| |||||  |||| || ||||||||||| || ||||||||||| |||  |
Sbjct: 1262 aactataaggatactggtttgttcggcgtgtatgctgttgcaaagcctgattgtttgagt 1321

                  
Query: 531  gatttg 536
            ||||||
Sbjct: 1322 gatttg 1327



to top

>emb|X80235.1|STBIIMPP S.tuberosum mRNA for beta-II MPP
          Length = 1848

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 238/306 (77%)
 Strand = Plus / Plus

                                                                        
Query: 231  ccagccatttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaa 290
            ||||| |||||||| ||||| |||||  |  | |||||||||||||| ||  | || |||
Sbjct: 1006 ccagcaatttttacaggttcagaggttagggtaattgatgatgacattccgttggcacaa 1065

                                                                        
Query: 291  tttgctgttgccttcaatggagcatcctggacagatcccgattctattgcattaatggtt 350
            ||||||||||| ||  | || ||| | ||||| ||||| ||| | ||| |  | ||||| 
Sbjct: 1066 tttgctgttgcttttcaaggggcaccatggactgatccagatgccattccgctgatggta 1125

                                                                        
Query: 351  atgcaaaccatgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcg 410
            |||||| ||||||| ||  | ||||| || | ||| ||||||||||| |||||||| || 
Sbjct: 1126 atgcaatccatgctgggaacttggaataaaaatgccggaggagggaaacacatgggctcc 1185

                                                                        
Query: 411  gagcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattcaacaca 470
            || || | ||| || || || || |||||  |||||||||| || ||| | || ||||| 
Sbjct: 1186 gatctggcacaaagtgttgccattaatgaactagctgagagcatgatgtcttttaacacc 1245

                                                                        
Query: 471  aactataaggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggat 530
            || |||||||| ||||| ||||| || ||||||||||| || ||| ||||||| |||  |
Sbjct: 1246 aattataaggatactggtctgttcggcgtgtatgctgttgcaaagtctgattgtttgagt 1305

                  
Query: 531  gatttg 536
            ||||||
Sbjct: 1306 gatttg 1311



to top

>gb|AC124191.4| Mus musculus BAC clone RP23-275E4 from 18, complete sequence
          Length = 203003

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 117   gttattactgctgctggtgctg 138
             ||||||||||||||||||||||
Sbjct: 91293 gttattactgctgctggtgctg 91314



to top

>emb|AL136146.10| Human DNA sequence from clone RP5-916O11 on chromosome 11p12-13,
             complete sequence
          Length = 106073

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 370   cctggaacaagagtgctggag 390
             |||||||||||||||||||||
Sbjct: 76497 cctggaacaagagtgctggag 76477



to top

>gb|AC026269.26| Homo sapiens chromosome 11, clone RP11-745E9, complete sequence
          Length = 173145

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 370   cctggaacaagagtgctggag 390
             |||||||||||||||||||||
Sbjct: 12819 cctggaacaagagtgctggag 12799



to top

>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 260     aatcattgatgatgacatgcc 280
               |||||||||||||||||||||
Sbjct: 1531145 aatcattgatgatgacatgcc 1531165



to top

>dbj|AB010699.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSN9
          Length = 61001

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 194   tgaccctacaacaaccaacat 214
             |||||||||||||||||||||
Sbjct: 40444 tgaccctacaacaaccaacat 40424



to top

>ref|XM_511581.1| PREDICTED: Pan troglodytes hypothetical protein XP_511581
           (LOC454765), mRNA
          Length = 1261

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 ggttattactgctgctggtg 135
           ||||||||||||||||||||
Sbjct: 695 ggttattactgctgctggtg 714



to top

>gb|AC099884.12| Mus musculus chromosome 15, clone RP23-11F24, complete sequence
          Length = 265797

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    tagaatggttattactgctg 129
              ||||||||||||||||||||
Sbjct: 116336 tagaatggttattactgctg 116317



to top

>gb|AC154426.2| Mus musculus BAC clone RP24-199A21 from chromosome 14, complete sequence
          Length = 210568

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 558    atgagcaaattatcatacag 577
              ||||||||||||||||||||
Sbjct: 103805 atgagcaaattatcatacag 103824



to top

>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 121     ttactgctgctggtgctgtt 140
               ||||||||||||||||||||
Sbjct: 1693966 ttactgctgctggtgctgtt 1693985



to top

>gb|AC120877.15| Mus musculus chromosome 6, clone RP24-548D19, complete sequence
          Length = 228206

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aagtctatcaccaaaaagga 73
             ||||||||||||||||||||
Sbjct: 91145 aagtctatcaccaaaaagga 91164



to top

>gb|AC110247.9| Mus musculus chromosome 1, clone RP23-254H20, complete sequence
          Length = 209326

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    acacggcttctagaatggtt 119
              ||||||||||||||||||||
Sbjct: 138244 acacggcttctagaatggtt 138263



to top

>gb|AC119846.14| Mus musculus chromosome 1, clone RP23-45A13, complete sequence
          Length = 242338

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  acacggcttctagaatggtt 119
            ||||||||||||||||||||
Sbjct: 3783 acacggcttctagaatggtt 3802



to top

>gb|AC101729.8| Mus musculus chromosome 1, clone RP23-362J21, complete sequence
          Length = 177946

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    aagcagccagccatttttac 244
              ||||||||||||||||||||
Sbjct: 162482 aagcagccagccatttttac 162463



to top

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 121     ttactgctgctggtgctgtt 140
               ||||||||||||||||||||
Sbjct: 5590190 ttactgctgctggtgctgtt 5590171



to top

>gb|AC102663.6| Mus musculus chromosome 6, clone RP23-244M15, complete sequence
          Length = 223742

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     aagtctatcaccaaaaagga 73
              ||||||||||||||||||||
Sbjct: 211296 aagtctatcaccaaaaagga 211315



to top

>gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete sequence
          Length = 118633

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   atcattgatgatgacatgcc 280
             ||||||||||||||||||||
Sbjct: 61095 atcattgatgatgacatgcc 61114



to top

>emb|AL590995.14| Human DNA sequence from clone RP11-475B22 on chromosome 6, complete
             sequence
          Length = 113362

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 554   agagatgagcaaattatcat 573
             ||||||||||||||||||||
Sbjct: 75538 agagatgagcaaattatcat 75557



to top

>emb|AL391821.7| Human DNA sequence from clone RP11-212B22 on chromosome Xq21.2-22.2
             Contains the 3' end of the DIAPH2 gene for diaphanous
             (Drosophila, homolog) 2 and the 5' end of a novel gene
             (EPAG), complete sequence
          Length = 158408

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 161   acaggcaaaagagctgttcaaaac 184
             |||||||||||| |||||||||||
Sbjct: 29558 acaggcaaaagacctgttcaaaac 29581



to top

>ref|XM_966541.1| PREDICTED: Tribolium castaneum similar to CG5502-PA (LOC660298),
           mRNA
          Length = 1369

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 gatgacatgccccttgctca 289
           ||||||||||||||||||||
Sbjct: 504 gatgacatgccccttgctca 485



to top

>emb|X72832.1|SEDEXB S.equisimilis dexb, abc, lrp, skc, rel genes and ORF1
          Length = 8931

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 525  ttggatgatttggcttttgc 544
            ||||||||||||||||||||
Sbjct: 3306 ttggatgatttggcttttgc 3287



to top

>emb|BX004761.10| Zebrafish DNA sequence from clone DKEY-11I10 in linkage group 20
             Contains a novel gene and a CpG island, complete sequence
          Length = 132841

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   tgccttcaatggagcatcct 318
             ||||||||||||||||||||
Sbjct: 38716 tgccttcaatggagcatcct 38697



to top

>emb|BX296553.6| Zebrafish DNA sequence from clone CH211-222G19 in linkage group 8,
             complete sequence
          Length = 108215

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   tgccttcaatggagcatcct 318
             ||||||||||||||||||||
Sbjct: 52958 tgccttcaatggagcatcct 52977



to top

>gb|AC022819.8| Homo sapiens chromosome 15, clone RP11-41I15, complete sequence
          Length = 193803

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   ctgctgctggtgctgttaagcatg 147
             ||||||||| ||||||||||||||
Sbjct: 42734 ctgctgctgctgctgttaagcatg 42711



to top

>gb|AC037479.9| Homo sapiens chromosome 15, clone RP11-616M17, complete sequence
          Length = 177761

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 124   ctgctgctggtgctgttaagcatg 147
             ||||||||| ||||||||||||||
Sbjct: 77334 ctgctgctgctgctgttaagcatg 77357



to top

>gb|AC010314.6| Homo sapiens chromosome 5 clone CTB-83L16, complete sequence
          Length = 124861

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 87    attcaaaatcattacacggcttct 110
             ||||||||||||| ||||||||||
Sbjct: 74311 attcaaaatcattccacggcttct 74334



to top

>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     gagctgttcaaaacgctgcc 190
               ||||||||||||||||||||
Sbjct: 1290157 gagctgttcaaaacgctgcc 1290138



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 521     ttgcttggatgatttggctt 540
               ||||||||||||||||||||
Sbjct: 3363400 ttgcttggatgatttggctt 3363419



to top

>ref|XM_575971.1| PREDICTED: Rattus norvegicus similar to hypothetical protein
            A530045M11 (LOC500597), mRNA
          Length = 2769

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 296  tgttgccttcaatggagcat 315
            ||||||||||||||||||||
Sbjct: 2257 tgttgccttcaatggagcat 2238



to top

>dbj|AK068475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152H07, full
            insert sequence
          Length = 4125

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 521  ttgcttggatgatttggctt 540
            ||||||||||||||||||||
Sbjct: 1318 ttgcttggatgatttggctt 1337



to top

>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
             complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   ttactgctgctggtgctgtt 140
             ||||||||||||||||||||
Sbjct: 57109 ttactgctgctggtgctgtt 57090



to top

>gb|AC101789.9| Mus musculus chromosome 1, clone RP24-150F11, complete sequence
          Length = 150474

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    aagcagccagccatttttac 244
              ||||||||||||||||||||
Sbjct: 134926 aagcagccagccatttttac 134945



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 521     ttgcttggatgatttggctt 540
               ||||||||||||||||||||
Sbjct: 3363345 ttgcttggatgatttggctt 3363364



to top

>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137936

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 521   ttgcttggatgatttggctt 540
             ||||||||||||||||||||
Sbjct: 42453 ttgcttggatgatttggctt 42472


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,375,556
Number of Sequences: 3902068
Number of extensions: 5375556
Number of successful extensions: 103340
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103045
Number of HSP's gapped (non-prelim): 288
length of query: 577
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 554
effective length of database: 17,143,297,704
effective search space: 9497386928016
effective search space used: 9497386928016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top