ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags21i19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK065966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 3e-73
2gb|AY103949.1| Zea mays PCO103424 mRNA sequence 208 2e-50
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 135 2e-28
4gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare str... 135 2e-28
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
6gb|AC121840.3| Mus musculus BAC clone RP24-79E2 from chromosome ... 42 2.2
7gb|AC122729.23| Medicago truncatula clone mth1-62g18, complete s... 42 2.2
8emb|AL079336.27|HSJ662M14 Human DNA sequence from clone RP4-662M... 42 2.2
9gb|AC162611.2| Mus musculus chromosome 3, clone RP24-86E1, compl... 42 2.2
10gb|AC105177.5| Homo sapiens chromosome 8, clone RP11-91D24, comp... 42 2.2
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
12emb|BX820631.1|CNS0AA0U Arabidopsis thaliana Full-length cDNA Co... 42 2.2
13dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
14gb|AC103389.10| Mus musculus chromosome 3, clone RP24-419J17, co... 42 2.2
15dbj|AP005359.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 2.2
16dbj|AP005368.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 2.2
17gb|AC131249.43| Medicago truncatula clone mth2-8p18, complete se... 40 8.7
18emb|AL138854.1|SPAC23G3 S.pombe chromosome I cosmid c23G3 40 8.7
19gb|AC008501.5| Homo sapiens chromosome 5 clone CTC-439N6, comple... 40 8.7
20gb|AC008589.6| Homo sapiens chromosome 5 clone CTC-574I1, comple... 40 8.7
21gb|AC008927.6| Homo sapiens chromosome 5 clone CTD-2287O23, comp... 40 8.7
22ref|NM_001018499.1| Schizosaccharomyces pombe 972h- hypothetical... 40 8.7
23gb|AC122710.3| Homo sapiens chromosome 5 clone RP11-332J15, comp... 40 8.7
24gb|AF135182.3| Serratia entomophila plasmid pADAP, partial sequence 40 8.7
25gb|AC008779.5|AC008779 Homo sapiens chromosome 5 clone CTD-2023H... 40 8.7
26gb|AC099489.2| Homo sapiens chromosome 16 clone CTD-3088G3, comp... 40 8.7
27emb|AL954850.12| Mouse DNA sequence from clone RP23-331B22 on ch... 40 8.7
28emb|AL844849.13| Mouse DNA sequence from clone RP23-383L13 on ch... 40 8.7

>dbj|AK065966.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047E12, full
            insert sequence
          Length = 2797

 Score =  283 bits (143), Expect = 3e-73
 Identities = 332/395 (84%)
 Strand = Plus / Plus

                                                                        
Query: 234  tatcttccatatatttagagtttttggatacctttggggatatacagttgatcaagaagg 293
            |||||||||||| ||||||||||||||||   |||||||||  |||   |||||||||||
Sbjct: 2038 tatcttccatatttttagagtttttggatctatttggggatgcacaagcgatcaagaagg 2097

                                                                        
Query: 294  ctacaactcgacatactattctattttcacgtaaaaggagcattctgccatcaaagaaac 353
            |||| | ||| |||  || ||  ||||| || || || ||||| ||| |||||||||| |
Sbjct: 2098 ctaccaatcggcatcttactcatttttcgcggaagagaagcatgctgtcatcaaagaagc 2157

                                                                        
Query: 354  gaagagccgatgatgctgttatgtctggtagagataaaatggctaaaaccggagatggca 413
            ||||||| ||||||| | | ||||| |  ||||||||| ||||||  |  || ||||| |
Sbjct: 2158 gaagagctgatgatgttatcatgtcagacagagataaattggctaggattggggatggta 2217

                                                                        
Query: 414  cccaaccagtcatgggaactgatccaaatgctcataatcctgcagtttggcctgcgactt 473
            | || |||||  ||||||||||||||||||||||||||||| |||||||||| ||||| |
Sbjct: 2218 ctcagccagttgtgggaactgatccaaatgctcataatcctccagtttggccagcgacat 2277

                                                                        
Query: 474  ctgaagcatcagcgcagcaatggggggctgcttacgcacaacaggctgcttatcctgcat 533
            |||||||||| | ||| |||||||| |||||||| |||| ||||||  |||||||||| |
Sbjct: 2278 ctgaagcatcggggcaacaatggggagctgcttatgcaccacaggccacttatcctgcgt 2337

                                                                        
Query: 534  atggagcttacgactacagccagcaaatgccccaatctgctcctcaagcagccgcttatg 593
            ||||| |||||||||||||||| |||||||| |||||||||||||||||||| ||||| |
Sbjct: 2338 atggaacttacgactacagccatcaaatgcctcaatctgctcctcaagcagctgcttacg 2397

                                               
Query: 594  gtgcctatcctcccacataccctgcccaggcctac 628
            | ||||||||||| |||||||| || |||||||||
Sbjct: 2398 gcgcctatcctccaacataccccgctcaggcctac 2432



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                        
Query: 119  gagtcgatctttcaatctgagaagcgaattgatttgttagaatcactggtggagaagttt 178
            ||||||||| ||| |||||| ||||| ||||| || ||||| |||||||| |||||||||
Sbjct: 1923 gagtcgatccttccatctgaaaagcgtattgaatttttagattcactggtcgagaagttt 1982

                       
Query: 179  cttacaactga 189
            |||||| ||||
Sbjct: 1983 cttacagctga 1993



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>gb|AY103949.1| Zea mays PCO103424 mRNA sequence
          Length = 1035

 Score =  208 bits (105), Expect = 2e-50
 Identities = 177/201 (88%)
 Strand = Plus / Plus

                                                                       
Query: 427 gggaactgatccaaatgctcataatcctgcagtttggcctgcgacttctgaagcatcagc 486
           |||||||||||||||||||   |||||| | ||||||||||| |||||||||||||| | 
Sbjct: 404 gggaactgatccaaatgcttccaatcctcctgtttggcctgcaacttctgaagcatctgg 463

                                                                       
Query: 487 gcagcaatggggggctgcttacgcacaacaggctgcttatcctgcatatggagcttacga 546
           ||| |||||||| ||| |||| ||||| |||||||| ||||||||||||||| |||||||
Sbjct: 464 gcaacaatggggagcttcttatgcacagcaggctgcatatcctgcatatggaacttacga 523

                                                                       
Query: 547 ctacagccagcaaatgccccaatctgctcctcaagcagccgcttatggtgcctatcctcc 606
           ||||||||| |||||||||||  |||||||||||||||| || |||||||| ||||||||
Sbjct: 524 ctacagccatcaaatgccccagcctgctcctcaagcagctgcctatggtgcttatcctcc 583

                                
Query: 607 cacataccctgcccaggccta 627
            |||||| |||| ||||||||
Sbjct: 584 aacatactctgcacaggccta 604



 Score =  139 bits (70), Expect = 1e-29
 Identities = 214/262 (81%)
 Strand = Plus / Plus

                                                                       
Query: 93  cagttcttgaggctgtcatctttctcgagtcgatctttcaatctgagaagcgaattgatt 152
           |||| ||||||||||||||   ||| ||||| || |||| ||  || ||||| |||||||
Sbjct: 73  cagtgcttgaggctgtcattcatctagagtcaatttttccatgcgaaaagcgtattgatt 132

                                                                       
Query: 153 tgttagaatcactggtggagaagtttcttacaactgagcagactcaaggggagctggcaa 212
           | ||||| ||||| |||||||||||| ||||| ||||     |||| || ||| ||||||
Sbjct: 133 ttttagactcacttgtggagaagtttgttacacctgaatcatctcagggagaggtggcaa 192

                                                                       
Query: 213 gcttaaacgacaaagaggaattatcttccatatatttagagtttttggatacctttgggg 272
           |  ||   |||||||||||| |||||||||||| ||||||||||||||||  ||||||||
Sbjct: 193 gtctagttgacaaagaggaaatatcttccatatttttagagtttttggatctctttgggg 252

                                                                       
Query: 273 atatacagttgatcaagaaggctacaactcgacatactattctattttcacgtaaaagga 332
           ||  | |||  ||||||||||||  |||||| ||||| | ||| |||||| |||| || |
Sbjct: 253 atgcaaagtcaatcaagaaggctttaactcggcatacaactcttttttcatgtaagagaa 312

                                 
Query: 333 gcattctgccatcaaagaaacg 354
           ||||||||||||||||||||||
Sbjct: 313 gcattctgccatcaaagaaacg 334



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  135 bits (68), Expect = 2e-28
 Identities = 194/236 (82%)
 Strand = Plus / Minus

                                                                           
Query: 283     gatcaagaaggctacaactcgacatactattctattttcacgtaaaaggagcattctgcc 342
               ||||||||||||||| | ||| |||  || ||  ||||| || || || ||||| ||| |
Sbjct: 5730199 gatcaagaaggctaccaatcggcatcttactcatttttcgcggaagagaagcatgctgtc 5730140

                                                                           
Query: 343     atcaaagaaacgaagagccgatgatgctgttatgtctggtagagataaaatggctaaaac 402
               ||||||||| |||||||| ||||||| | | ||||| |  ||||||||| ||||||  | 
Sbjct: 5730139 atcaaagaagcgaagagctgatgatgttatcatgtcagacagagataaattggctaggat 5730080

                                                                           
Query: 403     cggagatggcacccaaccagtcatgggaactgatccaaatgctcataatcctgcagtttg 462
                || ||||| || || |||||  ||||||||||||||||||||||||||||| |||||||
Sbjct: 5730079 tggggatggtactcagccagttgtgggaactgatccaaatgctcataatcctccagtttg 5730020

                                                                       
Query: 463     gcctgcgacttctgaagcatcagcgcagcaatggggggctgcttacgcacaacagg 518
               ||| ||||| ||||||||||| | ||| |||||||| |||||||| |||| |||||
Sbjct: 5730019 gccagcgacatctgaagcatcggggcaacaatggggagctgcttatgcaccacagg 5729964



 Score =  123 bits (62), Expect = 8e-25
 Identities = 86/94 (91%)
 Strand = Plus / Minus

                                                                           
Query: 522     cttatcctgcatatggagcttacgactacagccagcaaatgccccaatctgctcctcaag 581
               |||||||||| |||||| |||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 5729699 cttatcctgcgtatggaacttacgactacagccatcaaatgcctcaatctgctcctcaag 5729640

                                                 
Query: 582     cagccgcttatggtgcctatcctcccacataccc 615
               |||| ||||| || ||||||||||| ||||||||
Sbjct: 5729639 cagctgcttacggcgcctatcctccaacataccc 5729606



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                           
Query: 119     gagtcgatctttcaatctgagaagcgaattgatttgttagaatcactggtggagaagttt 178
               ||||||||| ||| |||||| ||||| ||||| || ||||| |||||||| |||||||||
Sbjct: 5730730 gagtcgatccttccatctgaaaagcgtattgaatttttagattcactggtcgagaagttt 5730671

                          
Query: 179     cttacaactga 189
               |||||| ||||
Sbjct: 5730670 cttacagctga 5730660



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>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0021B21, from chromosome 3, complete sequence
          Length = 166777

 Score =  135 bits (68), Expect = 2e-28
 Identities = 194/236 (82%)
 Strand = Plus / Plus

                                                                          
Query: 283    gatcaagaaggctacaactcgacatactattctattttcacgtaaaaggagcattctgcc 342
              ||||||||||||||| | ||| |||  || ||  ||||| || || || ||||| ||| |
Sbjct: 100972 gatcaagaaggctaccaatcggcatcttactcatttttcgcggaagagaagcatgctgtc 101031

                                                                          
Query: 343    atcaaagaaacgaagagccgatgatgctgttatgtctggtagagataaaatggctaaaac 402
              ||||||||| |||||||| ||||||| | | ||||| |  ||||||||| ||||||  | 
Sbjct: 101032 atcaaagaagcgaagagctgatgatgttatcatgtcagacagagataaattggctaggat 101091

                                                                          
Query: 403    cggagatggcacccaaccagtcatgggaactgatccaaatgctcataatcctgcagtttg 462
               || ||||| || || |||||  ||||||||||||||||||||||||||||| |||||||
Sbjct: 101092 tggggatggtactcagccagttgtgggaactgatccaaatgctcataatcctccagtttg 101151

                                                                      
Query: 463    gcctgcgacttctgaagcatcagcgcagcaatggggggctgcttacgcacaacagg 518
              ||| ||||| ||||||||||| | ||| |||||||| |||||||| |||| |||||
Sbjct: 101152 gccagcgacatctgaagcatcggggcaacaatggggagctgcttatgcaccacagg 101207



 Score =  123 bits (62), Expect = 8e-25
 Identities = 86/94 (91%)
 Strand = Plus / Plus

                                                                          
Query: 522    cttatcctgcatatggagcttacgactacagccagcaaatgccccaatctgctcctcaag 581
              |||||||||| |||||| |||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 101472 cttatcctgcgtatggaacttacgactacagccatcaaatgcctcaatctgctcctcaag 101531

                                                
Query: 582    cagccgcttatggtgcctatcctcccacataccc 615
              |||| ||||| || ||||||||||| ||||||||
Sbjct: 101532 cagctgcttacggcgcctatcctccaacataccc 101565



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                          
Query: 119    gagtcgatctttcaatctgagaagcgaattgatttgttagaatcactggtggagaagttt 178
              ||||||||| ||| |||||| ||||| ||||| || ||||| |||||||| |||||||||
Sbjct: 100441 gagtcgatccttccatctgaaaagcgtattgaatttttagattcactggtcgagaagttt 100500

                         
Query: 179    cttacaactga 189
              |||||| ||||
Sbjct: 100501 cttacagctga 100511



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  135 bits (68), Expect = 2e-28
 Identities = 194/236 (82%)
 Strand = Plus / Minus

                                                                           
Query: 283     gatcaagaaggctacaactcgacatactattctattttcacgtaaaaggagcattctgcc 342
               ||||||||||||||| | ||| |||  || ||  ||||| || || || ||||| ||| |
Sbjct: 5729412 gatcaagaaggctaccaatcggcatcttactcatttttcgcggaagagaagcatgctgtc 5729353

                                                                           
Query: 343     atcaaagaaacgaagagccgatgatgctgttatgtctggtagagataaaatggctaaaac 402
               ||||||||| |||||||| ||||||| | | ||||| |  ||||||||| ||||||  | 
Sbjct: 5729352 atcaaagaagcgaagagctgatgatgttatcatgtcagacagagataaattggctaggat 5729293

                                                                           
Query: 403     cggagatggcacccaaccagtcatgggaactgatccaaatgctcataatcctgcagtttg 462
                || ||||| || || |||||  ||||||||||||||||||||||||||||| |||||||
Sbjct: 5729292 tggggatggtactcagccagttgtgggaactgatccaaatgctcataatcctccagtttg 5729233

                                                                       
Query: 463     gcctgcgacttctgaagcatcagcgcagcaatggggggctgcttacgcacaacagg 518
               ||| ||||| ||||||||||| | ||| |||||||| |||||||| |||| |||||
Sbjct: 5729232 gccagcgacatctgaagcatcggggcaacaatggggagctgcttatgcaccacagg 5729177



 Score =  123 bits (62), Expect = 8e-25
 Identities = 86/94 (91%)
 Strand = Plus / Minus

                                                                           
Query: 522     cttatcctgcatatggagcttacgactacagccagcaaatgccccaatctgctcctcaag 581
               |||||||||| |||||| |||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 5728912 cttatcctgcgtatggaacttacgactacagccatcaaatgcctcaatctgctcctcaag 5728853

                                                 
Query: 582     cagccgcttatggtgcctatcctcccacataccc 615
               |||| ||||| || ||||||||||| ||||||||
Sbjct: 5728852 cagctgcttacggcgcctatcctccaacataccc 5728819



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                           
Query: 119     gagtcgatctttcaatctgagaagcgaattgatttgttagaatcactggtggagaagttt 178
               ||||||||| ||| |||||| ||||| ||||| || ||||| |||||||| |||||||||
Sbjct: 5729943 gagtcgatccttccatctgaaaagcgtattgaatttttagattcactggtcgagaagttt 5729884

                          
Query: 179     cttacaactga 189
               |||||| ||||
Sbjct: 5729883 cttacagctga 5729873



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>gb|AC121840.3| Mus musculus BAC clone RP24-79E2 from chromosome 3, complete sequence
          Length = 180558

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 383    agagataaaatggctaaaacc 403
              |||||||||||||||||||||
Sbjct: 171770 agagataaaatggctaaaacc 171790



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>gb|AC122729.23| Medicago truncatula clone mth1-62g18, complete sequence
          Length = 82977

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 426   tgggaactgatccaaatgctc 446
             |||||||||||||||||||||
Sbjct: 33427 tgggaactgatccaaatgctc 33447



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>emb|AL079336.27|HSJ662M14 Human DNA sequence from clone RP4-662M14 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 117077

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 560   atgccccaatctgctcctcaa 580
             |||||||||||||||||||||
Sbjct: 28057 atgccccaatctgctcctcaa 28077



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>gb|AC162611.2| Mus musculus chromosome 3, clone RP24-86E1, complete sequence
          Length = 229643

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 95     gttcttgaggctgtcatcttt 115
              |||||||||||||||||||||
Sbjct: 155703 gttcttgaggctgtcatcttt 155723



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>gb|AC105177.5| Homo sapiens chromosome 8, clone RP11-91D24, complete sequence
          Length = 149126

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 23     atgatctgtgacttggaaaag 43
              |||||||||||||||||||||
Sbjct: 100576 atgatctgtgacttggaaaag 100556



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 144     gaattgatttgttagaatcac 164
               |||||||||||||||||||||
Sbjct: 9615327 gaattgatttgttagaatcac 9615307



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>emb|BX820631.1|CNS0AA0U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH54ZC08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2933

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 513 aacaggctgcttatcctgcat 533
           |||||||||||||||||||||
Sbjct: 949 aacaggctgcttatcctgcat 929



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>dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0693E08
          Length = 157969

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 144   gaattgatttgttagaatcac 164
             |||||||||||||||||||||
Sbjct: 79545 gaattgatttgttagaatcac 79525



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>gb|AC103389.10| Mus musculus chromosome 3, clone RP24-419J17, complete sequence
          Length = 162643

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 95     gttcttgaggctgtcatcttt 115
              |||||||||||||||||||||
Sbjct: 133162 gttcttgaggctgtcatcttt 133142



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>dbj|AP005359.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1470F2, complete
             sequence
          Length = 164913

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 23    atgatctgtgacttggaaaag 43
             |||||||||||||||||||||
Sbjct: 47275 atgatctgtgacttggaaaag 47255



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>dbj|AP005368.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB870F5, complete
              sequence
          Length = 111461

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 23     atgatctgtgacttggaaaag 43
              |||||||||||||||||||||
Sbjct: 109955 atgatctgtgacttggaaaag 109935



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>gb|AC131249.43| Medicago truncatula clone mth2-8p18, complete sequence
          Length = 104866

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   aactgatccaaatgctcata 449
             ||||||||||||||||||||
Sbjct: 47531 aactgatccaaatgctcata 47512



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>emb|AL138854.1|SPAC23G3 S.pombe chromosome I cosmid c23G3
          Length = 41181

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   atcactggtggagaagtttc 179
             ||||||||||||||||||||
Sbjct: 16582 atcactggtggagaagtttc 16563



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>gb|AC008501.5| Homo sapiens chromosome 5 clone CTC-439N6, complete sequence
          Length = 176903

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 560    atgccccaatctgctcctca 579
              ||||||||||||||||||||
Sbjct: 130532 atgccccaatctgctcctca 130513



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>gb|AC008589.6| Homo sapiens chromosome 5 clone CTC-574I1, complete sequence
          Length = 121272

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   atgccccaatctgctcctca 579
             ||||||||||||||||||||
Sbjct: 77671 atgccccaatctgctcctca 77690



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>gb|AC008927.6| Homo sapiens chromosome 5 clone CTD-2287O23, complete sequence
          Length = 165604

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   atgccccaatctgctcctca 579
             ||||||||||||||||||||
Sbjct: 84000 atgccccaatctgctcctca 84019



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>ref|NM_001018499.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPAC23G3.02c), partial mRNA
          Length = 14775

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 atcactggtggagaagtttc 179
           ||||||||||||||||||||
Sbjct: 157 atcactggtggagaagtttc 176



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>gb|AC122710.3| Homo sapiens chromosome 5 clone RP11-332J15, complete sequence
          Length = 204540

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 145    aattgatttgttagaatcactggt 168
              ||||||||| ||||||||||||||
Sbjct: 195311 aattgatttcttagaatcactggt 195334



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>gb|AF135182.3| Serratia entomophila plasmid pADAP, partial sequence
          Length = 106143

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 512   caacaggctgcttatcctgc 531
             ||||||||||||||||||||
Sbjct: 86265 caacaggctgcttatcctgc 86246



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>gb|AC008779.5|AC008779 Homo sapiens chromosome 5 clone CTD-2023H18, complete sequence
          Length = 123275

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 560    atgccccaatctgctcctca 579
              ||||||||||||||||||||
Sbjct: 119914 atgccccaatctgctcctca 119933



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>gb|AC099489.2| Homo sapiens chromosome 16 clone CTD-3088G3, complete sequence
          Length = 204493

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     cttggaaaaggcaagggagg 53
              ||||||||||||||||||||
Sbjct: 110259 cttggaaaaggcaagggagg 110240



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>emb|AL954850.12| Mouse DNA sequence from clone RP23-331B22 on chromosome X, complete
              sequence
          Length = 146713

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 307    tactattctattttcacgtaaaag 330
              |||||||||||||||| |||||||
Sbjct: 105698 tactattctattttcaagtaaaag 105721



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>emb|AL844849.13| Mouse DNA sequence from clone RP23-383L13 on chromosome 2, complete
             sequence
          Length = 155501

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   aattgatttgttagaatcac 164
             ||||||||||||||||||||
Sbjct: 71266 aattgatttgttagaatcac 71247


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,073,829
Number of Sequences: 3902068
Number of extensions: 5073829
Number of successful extensions: 94570
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94417
Number of HSP's gapped (non-prelim): 147
length of query: 639
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 616
effective length of database: 17,143,297,704
effective search space: 10560271385664
effective search space used: 10560271385664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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