ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags21i10 |
|---|---|
| Clone Library Name | barley_pub |
>RS26_ORYSA (P49216) 40S ribosomal protein S26 (S31)| Length = 133 Score = 145 bits (367), Expect = 6e-35 Identities = 65/69 (94%), Positives = 66/69 (95%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHVKYIRCSNCAKCCPKDKAIKRF VRNIVEQ A+RDVQE CVHDGYVLPKLYAKVHHC Sbjct: 15 RGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQVAIRDVQEGCVHDGYVLPKLYAKVHHC 74 Query: 183 VSCAIHAHI 209 VSCAIHAHI Sbjct: 75 VSCAIHAHI 83
>RS26_ARATH (P49206) 40S ribosomal protein S26| Length = 131 Score = 125 bits (314), Expect = 9e-29 Identities = 55/69 (79%), Positives = 62/69 (89%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHV IRCSNC KCCPKDKAIKRF+VRNIVEQAA+RDVQEA V++GY LPKLYAK +C Sbjct: 15 RGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYC 74 Query: 183 VSCAIHAHI 209 VSCAIH+H+ Sbjct: 75 VSCAIHSHV 83
>RS26_DROME (P13008) 40S ribosomal protein S26 (DS31)| Length = 114 Score = 114 bits (286), Expect = 2e-25 Identities = 49/69 (71%), Positives = 61/69 (88%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHVK +RC+NCA+C PKDKAIK+F++RNIVE AAVRD+ EA + D YVLPKLYAK+H+C Sbjct: 15 RGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYC 74 Query: 183 VSCAIHAHI 209 VSCAIH+ + Sbjct: 75 VSCAIHSKV 83
>RS26_ANOGA (Q9GT45) 40S ribosomal protein S26| Length = 114 Score = 114 bits (284), Expect = 3e-25 Identities = 48/69 (69%), Positives = 61/69 (88%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHVK +RC+NCA+C PKDKAIK+F++RNIVE AAVRD+ +A V+ YVLPKLYAK+H+C Sbjct: 14 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHYC 73 Query: 183 VSCAIHAHI 209 VSCAIH+ + Sbjct: 74 VSCAIHSKV 82
>RS26_RAT (P62856) 40S ribosomal protein S26| Length = 114 Score = 113 bits (282), Expect = 5e-25 Identities = 49/69 (71%), Positives = 60/69 (86%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHV+ IRC+NCA+C PKDKAIK+F++RNIVE AAVRD+ EA V D YVLPKLY K+H+C Sbjct: 14 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC 73 Query: 183 VSCAIHAHI 209 VSCAIH+ + Sbjct: 74 VSCAIHSKV 82
>RS26_MOUSE (P62855) 40S ribosomal protein S26| Length = 114 Score = 113 bits (282), Expect = 5e-25 Identities = 49/69 (71%), Positives = 60/69 (86%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHV+ IRC+NCA+C PKDKAIK+F++RNIVE AAVRD+ EA V D YVLPKLY K+H+C Sbjct: 14 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC 73 Query: 183 VSCAIHAHI 209 VSCAIH+ + Sbjct: 74 VSCAIHSKV 82
>RS26_MACFA (P61251) 40S ribosomal protein S26| Length = 114 Score = 113 bits (282), Expect = 5e-25 Identities = 49/69 (71%), Positives = 60/69 (86%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHV+ IRC+NCA+C PKDKAIK+F++RNIVE AAVRD+ EA V D YVLPKLY K+H+C Sbjct: 14 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC 73 Query: 183 VSCAIHAHI 209 VSCAIH+ + Sbjct: 74 VSCAIHSKV 82
>RS26_HUMAN (P62854) 40S ribosomal protein S26| Length = 114 Score = 113 bits (282), Expect = 5e-25 Identities = 49/69 (71%), Positives = 60/69 (86%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHV+ IRC+NCA+C PKDKAIK+F++RNIVE AAVRD+ EA V D YVLPKLY K+H+C Sbjct: 14 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYC 73 Query: 183 VSCAIHAHI 209 VSCAIH+ + Sbjct: 74 VSCAIHSKV 82
>RS26_SHEEP (Q6Q312) 40S ribosomal protein S26| Length = 114 Score = 112 bits (280), Expect = 8e-25 Identities = 49/69 (71%), Positives = 60/69 (86%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHV+ IRC+NCA+C PKDKAIK+F++RNIVE AAVRD+ EA V D YVLPKLY K+H+C Sbjct: 14 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEAGVFDAYVLPKLYVKLHYC 73 Query: 183 VSCAIHAHI 209 VSCAIH+ + Sbjct: 74 VSCAIHSKV 82
>RS26_OCTVU (P27085) 40S ribosomal protein S26| Length = 127 Score = 112 bits (279), Expect = 1e-24 Identities = 49/69 (71%), Positives = 61/69 (88%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHVKYIRC+NCA+C PKDKAIK+F++RNIVE AAVRD+ +A V++ Y LPKLYAK+ +C Sbjct: 15 RGHVKYIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYEVYALPKLYAKLLYC 74 Query: 183 VSCAIHAHI 209 VSCAIH+ I Sbjct: 75 VSCAIHSKI 83
>RS26_CRICR (P30742) 40S ribosomal protein S26| Length = 114 Score = 111 bits (278), Expect = 1e-24 Identities = 48/69 (69%), Positives = 60/69 (86%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHV+ IRC+NCA+C PKDKAIK+F++RNIVE AAVRD+ EA V D YVLPKLY ++H+C Sbjct: 14 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVELHYC 73 Query: 183 VSCAIHAHI 209 VSCAIH+ + Sbjct: 74 VSCAIHSKV 82
>RS26_PIG (P49171) 40S ribosomal protein S26| Length = 114 Score = 110 bits (275), Expect = 3e-24 Identities = 48/69 (69%), Positives = 59/69 (85%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHV+ IRC+NCA+C PKDKAIK+F++RNIVE AAVR + EA V D YVLPKLY K+H+C Sbjct: 14 RGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRXISEASVFDAYVLPKLYVKLHYC 73 Query: 183 VSCAIHAHI 209 VSCAIH+ + Sbjct: 74 VSCAIHSKV 82
>RS26_CAEEL (O45499) 40S ribosomal protein S26| Length = 117 Score = 107 bits (268), Expect = 2e-23 Identities = 44/69 (63%), Positives = 58/69 (84%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHV +IRC+NC +CCPKDKAIK+F+VRNIVE AAVRD+ +A + Y LPKLY K+H+C Sbjct: 15 RGHVAFIRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYTQYALPKLYHKLHYC 74 Query: 183 VSCAIHAHI 209 ++CAIH+ + Sbjct: 75 IACAIHSKV 83
>RS26_BRUPA (P41959) 40S ribosomal protein S26 (Fragment)| Length = 83 Score = 106 bits (264), Expect = 6e-23 Identities = 45/69 (65%), Positives = 57/69 (82%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHV+ IRC+NC +C PKDKAIK+F+VRNIV AAVRD+ +A +D Y LPKLY K+H+C Sbjct: 15 RGHVRPIRCTNCGRCAPKDKAIKKFVVRNIVVAAAVRDISDASAYDSYALPKLYHKLHYC 74 Query: 183 VSCAIHAHI 209 VSCAIH+ + Sbjct: 75 VSCAIHSKV 83
>RS26_SCHCO (O93931) 40S ribosomal protein S26| Length = 126 Score = 105 bits (261), Expect = 1e-22 Identities = 43/69 (62%), Positives = 57/69 (82%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHV ++RCSNC++C KDKAIKRF VRN+VE AA+RD+ +A V+ Y +PKLY K+ +C Sbjct: 15 RGHVTFVRCSNCSRCVAKDKAIKRFTVRNMVESAAIRDISDASVYPEYAIPKLYIKIAYC 74 Query: 183 VSCAIHAHI 209 VSCAIH+H+ Sbjct: 75 VSCAIHSHV 83
>RS26_NEUCR (P21772) 40S ribosomal protein S26E (CRP5) (13.6 kDa ribosomal| protein) Length = 119 Score = 102 bits (253), Expect = 1e-21 Identities = 44/69 (63%), Positives = 55/69 (79%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHVK IRCSNC++C PKDKAIKRF +RN+VE AA+RD+ +A V Y +PK+Y K+ +C Sbjct: 15 RGHVKPIRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYTVPKMYLKLQYC 74 Query: 183 VSCAIHAHI 209 VSCAIH I Sbjct: 75 VSCAIHGKI 83
>RS26B_YEAST (P39939) 40S ribosomal protein S26-B| Length = 119 Score = 102 bits (253), Expect = 1e-21 Identities = 47/69 (68%), Positives = 54/69 (78%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHVK +RC NC+K PKDKAIKR +RNIVE AAVRD+ EA V+ Y LPK Y K+H+C Sbjct: 15 RGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYC 74 Query: 183 VSCAIHAHI 209 VSCAIHA I Sbjct: 75 VSCAIHARI 83
>RS26A_YEAST (P39938) 40S ribosomal protein S26-A| Length = 119 Score = 102 bits (253), Expect = 1e-21 Identities = 47/69 (68%), Positives = 54/69 (78%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHVK +RC NC+K PKDKAIKR +RNIVE AAVRD+ EA V+ Y LPK Y K+H+C Sbjct: 15 RGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYC 74 Query: 183 VSCAIHAHI 209 VSCAIHA I Sbjct: 75 VSCAIHARI 83
>RS26B_SCHPO (Q9UTG4) 40S ribosomal protein S26-B| Length = 119 Score = 99.8 bits (247), Expect = 5e-21 Identities = 41/69 (59%), Positives = 56/69 (81%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGHVK++RC NC++ PKDKAIKR+ +RN+VE AA+RD+ EA V+ Y +PKLY K+ +C Sbjct: 15 RGHVKFVRCINCSRAVPKDKAIKRWTIRNMVETAAIRDLSEASVYSEYTIPKLYIKLQYC 74 Query: 183 VSCAIHAHI 209 VSCAIH+ + Sbjct: 75 VSCAIHSRV 83
>RS26A_SCHPO (Q9UT56) 40S ribosomal protein S26-A| Length = 120 Score = 98.2 bits (243), Expect = 2e-20 Identities = 40/69 (57%), Positives = 55/69 (79%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHC 182 RGH K++RC NC++ PKDKAIKR+ +RN+VE AA+RD+ EA V+ Y +PK+Y K+ +C Sbjct: 15 RGHTKFVRCINCSRAVPKDKAIKRWNIRNMVETAAIRDLSEASVYSEYAIPKIYVKLQYC 74 Query: 183 VSCAIHAHI 209 VSCAIHA + Sbjct: 75 VSCAIHARV 83
>RS26_OXYNO (Q9BHU1) 40S ribosomal protein S26| Length = 125 Score = 79.0 bits (193), Expect = 1e-14 Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 2/71 (2%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQE--ACVHDGYVLPKLYAKVH 176 +GH +RC+NC + KDKAIKRF RN+V+ ++ RD+QE A + +PK+Y K+ Sbjct: 15 KGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYAQSDFTMPKIYVKLS 74 Query: 177 HCVSCAIHAHI 209 +CVSCAIHA I Sbjct: 75 YCVSCAIHARI 85
>RS26_MUSVI (P41692) 40S ribosomal protein S26 (Fragment)| Length = 40 Score = 44.7 bits (104), Expect = 2e-04 Identities = 18/26 (69%), Positives = 23/26 (88%) Frame = +3 Query: 3 RGHVKYIRCSNCAKCCPKDKAIKRFL 80 RGHV+ IRC+N A+C PKDKAIK+F+ Sbjct: 14 RGHVQPIRCTNLARCVPKDKAIKKFV 39
>T22D2_HUMAN (O75157) TSC22 domain family protein 2 (TSC22-related-inducible| leucine zipper protein 4) Length = 780 Score = 30.8 bits (68), Expect = 3.0 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +1 Query: 187 LVPSMLTLSVSAPVRTGGTVSPRSVSGAGTTALGLDKVARP 309 L+ L + +AP GG VS RSVSGA + L + P Sbjct: 89 LLDGQLAAAAAAPANGGGVVSARSVSGALASTLAAAATSAP 129
>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed| Length = 596 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = -3 Query: 183 HSGAPWHTAWGEHIHHAHKPPAHLSQQPAPQCSSP 79 H P H H HH H P QQP+PQ S P Sbjct: 94 HHQHPHHHQLPHHPHHQHHP----QQQPSPQTSPP 124
>YFCK_SHIFL (Q83QQ8) UPF0209 protein yfcK| Length = 668 Score = 30.4 bits (67), Expect = 4.0 Identities = 11/40 (27%), Positives = 22/40 (55%) Frame = +3 Query: 81 VRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHCVSCAIH 200 V +I + ++++ +DGY+ P+ A HHC+ + H Sbjct: 483 VSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYH 522
>YFCK_ECOLI (P77182) UPF0209 protein yfcK| Length = 668 Score = 30.4 bits (67), Expect = 4.0 Identities = 11/40 (27%), Positives = 22/40 (55%) Frame = +3 Query: 81 VRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHCVSCAIH 200 V +I + ++++ +DGY+ P+ A HHC+ + H Sbjct: 483 VSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYH 522
>KPC1_COCHE (O42632) Protein kinase C-like (EC 2.7.11.13)| Length = 1174 Score = 30.0 bits (66), Expect = 5.2 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 22/84 (26%) Frame = +3 Query: 21 IRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEA--------------------CVHD 140 ++CS+C C K K + + + I + A D EA C H Sbjct: 485 MQCSDCNYTCHK-KCYPKVVTKCITQSNAETDPDEAKLNHRIPHRFENFSNMGANWCCHC 543 Query: 141 GYVLPKLYAKVHHCVSCAI--HAH 206 GYVLP + C C + HAH Sbjct: 544 GYVLPLGRKQTKKCNECGLTCHAH 567
>DHAS_PROMA (P49420) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA| dehydrogenase) (ASADH) Length = 343 Score = 30.0 bits (66), Expect = 5.2 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +1 Query: 166 PRCTTVFLVPSMLTLSVSAPVRTGGTVSPRSVSGAGTTAL 285 P CTT+ L + LS P++ + +S SGAG A+ Sbjct: 135 PNCTTILLALVLAPLSAQLPIKRVVVSTYQSASGAGARAM 174
>Y3185_PHOLL (Q7N2A3) UPF0209 protein plu3185| Length = 680 Score = 29.3 bits (64), Expect = 8.8 Identities = 12/42 (28%), Positives = 19/42 (45%) Frame = +3 Query: 81 VRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAH 206 V +I + +Q +DGY+ P A HHC+ + H Sbjct: 490 VSHIPTTTDLSQLQNVLCYDGYMTPANPANQHHCIGASYQRH 531
>SYI_THETN (Q8R9L3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 932 Score = 29.3 bits (64), Expect = 8.8 Identities = 16/59 (27%), Positives = 23/59 (38%) Frame = -3 Query: 579 LNQKVLSDIDSSEIVKI*RPDHKLCLTNQLSVQPIAAKTRIVQYPGMSKTRAGTITEAY 403 L +++ D E P H C+ + S+ K R+ YP SK R T Y Sbjct: 693 LVKQLTESFDKYEFYDFFHPVHNFCVVDMSSLYLDILKDRLYTYPAKSKERKAAQTTLY 751
>YFCK_ECOL6 (Q8FFH0) UPF0209 protein yfcK| Length = 668 Score = 29.3 bits (64), Expect = 8.8 Identities = 11/40 (27%), Positives = 21/40 (52%) Frame = +3 Query: 81 VRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHCVSCAIH 200 V +I + +++ +DGY+ P+ A HHC+ + H Sbjct: 483 VSHIPTTPELAKLKQVLCYDGYLTPQNPANQHHCIGASYH 522
>YFCK_ECO57 (Q8XCQ7) UPF0209 protein yfcK| Length = 668 Score = 29.3 bits (64), Expect = 8.8 Identities = 11/40 (27%), Positives = 21/40 (52%) Frame = +3 Query: 81 VRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHCVSCAIH 200 V +I + +++ +DGY+ P+ A HHC+ + H Sbjct: 483 VSHIPTTPELAKLKQVLCYDGYLTPQNPANQHHCIGASYH 522
>SINA_DROVI (P29304) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 29.3 bits (64), Expect = 8.8 Identities = 13/47 (27%), Positives = 22/47 (46%) Frame = +3 Query: 6 GHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGY 146 GH+ + C + CCP + +RN+ + +V+ C H GY Sbjct: 90 GHLVCVSCRSKLTCCPTCRG-PLANIRNLAMEEVASNVKFPCKHSGY 135
>SINA_DROME (P21461) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 29.3 bits (64), Expect = 8.8 Identities = 13/47 (27%), Positives = 22/47 (46%) Frame = +3 Query: 6 GHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGY 146 GH+ + C + CCP + +RN+ + +V+ C H GY Sbjct: 90 GHLVCVSCRSKLTCCPTCRG-PLANIRNLAMEKVASNVKFPCKHSGY 135
>SINA_DROER (P61093) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 29.3 bits (64), Expect = 8.8 Identities = 13/47 (27%), Positives = 22/47 (46%) Frame = +3 Query: 6 GHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGY 146 GH+ + C + CCP + +RN+ + +V+ C H GY Sbjct: 90 GHLVCVSCRSKLTCCPTCRG-PLANIRNLAMEKVASNVKFPCKHSGY 135
>SINA_DROWI (Q8I147) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 331 Score = 29.3 bits (64), Expect = 8.8 Identities = 13/47 (27%), Positives = 22/47 (46%) Frame = +3 Query: 6 GHVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGY 146 GH+ + C + CCP + +RN+ + +V+ C H GY Sbjct: 107 GHLVCVSCRSKLTCCPTCRG-PLANIRNLAMEKVASNVKFPCKHSGY 152 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,403,999 Number of Sequences: 219361 Number of extensions: 1055457 Number of successful extensions: 3617 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3418 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3593 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
