| Clone Name | bags21g10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196817.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0018F16.3), mRNA Length = 2157 Score = 547 bits (276), Expect = e-152 Identities = 516/596 (86%) Strand = Plus / Plus Query: 20 gaggcgcagttcttgaaccggacgcttgtcatggacttcagcgtctgcctcaattcacgg 79 ||||| |||| |||||||||||| ||||| |||||| | | || ||||||||||||||| Sbjct: 1084 gaggcacagtacttgaaccggacacttgttatggaccttaatgtgtgcctcaattcacgg 1143 Query: 80 tataccgccagtggcaaggacgaagaaaaggatttcaggttctactttgattttgagcac 139 ||||| | ||||||||||| ||||| | ||||| ||| |||||||||||||||||||| Sbjct: 1144 tatacttcaagtggcaaggatgaagagagagattttaggctctactttgattttgagcac 1203 Query: 140 ctgaaggaatctgcatctgtgatcgaccagagtcagttctggacagactgggggaagtgg 199 ||||| |||| ||||| || || |||||||| |||||||||||||| |||||||||||| Sbjct: 1204 ttgaagcaatcagcatcggtcattgaccagagccagttctggacagattgggggaagtgg 1263 Query: 200 cacaagaaggatcgactgaagaatcactatactgaagacatcaaggtgacccccatgaaa 259 |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 1264 cacaagaaggatagactgaagaatcactacactgaagacatcaaggtgaccccgatgcaa 1323 Query: 260 cttcgtgacgtcaaggacacgctgatcatgaggaagtttgggcatgttgagccggataac 319 |||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||| Sbjct: 1324 cttcgtgacgtcaaggacacactgatcatgaggaagtttgggaatgttgagcctgataac 1383 Query: 320 tactggtcacgtgtgtgcgagggtgagacagaggccatgatcaaacggccatggcatttc 379 | |||||| ||||| || ||||||||||| ||||| ||||||| || |||||| |||| Sbjct: 1384 ttctggtctcgtgtatgtgagggtgagacggaggcagtgatcaagcgcccatggtattta 1443 Query: 380 ttgtggaagtcgcgccgcttgatggagattgtgtctgccattgcctcccgaatgagttgg 439 |||||||| ||||| || ||||||||||| |||||||||||| ||||||| ||| |||| Sbjct: 1444 ttgtggaaatcgcgtcgattgatggagatcgtgtctgccatttcctcccggatggattgg 1503 Query: 440 gatttcgactcgatgcatgttgtgagaggagagaaagcccagaacacacagctttggcca 499 || || || || | ||||||||||| || |||||||||||||||| |||| | |||||| Sbjct: 1504 gactttgattcagtccatgttgtgaggggggagaaagcccagaacaaacagttgtggcca 1563 Query: 500 aaccttgatgcagatacctcgccagaaaatctccttacgacactcaatgataaggttggt 559 || |||||| |||||| || ||||| | ||||||||||||||| ||||||||||| ||| Sbjct: 1564 aatcttgatagagatacttctccagatagtctccttacgacacttaatgataaggtcggt 1623 Query: 560 gctggacggtatttgtacattgctaccgatgagtccgataaatcgttcttcgaccc 615 ||||| ||| ||||||||||||| ||| |||| |||||||||| ||||| ||||| Sbjct: 1624 gctggccggcatttgtacattgcaaccaatgaacccgataaatcattctttgaccc 1679
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 547 bits (276), Expect = e-152 Identities = 516/596 (86%) Strand = Plus / Plus Query: 20 gaggcgcagttcttgaaccggacgcttgtcatggacttcagcgtctgcctcaattcacgg 79 ||||| |||| |||||||||||| ||||| |||||| | | || ||||||||||||||| Sbjct: 41490 gaggcacagtacttgaaccggacacttgttatggaccttaatgtgtgcctcaattcacgg 41549 Query: 80 tataccgccagtggcaaggacgaagaaaaggatttcaggttctactttgattttgagcac 139 ||||| | ||||||||||| ||||| | ||||| ||| |||||||||||||||||||| Sbjct: 41550 tatacttcaagtggcaaggatgaagagagagattttaggctctactttgattttgagcac 41609 Query: 140 ctgaaggaatctgcatctgtgatcgaccagagtcagttctggacagactgggggaagtgg 199 ||||| |||| ||||| || || |||||||| |||||||||||||| |||||||||||| Sbjct: 41610 ttgaagcaatcagcatcggtcattgaccagagccagttctggacagattgggggaagtgg 41669 Query: 200 cacaagaaggatcgactgaagaatcactatactgaagacatcaaggtgacccccatgaaa 259 |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 41670 cacaagaaggatagactgaagaatcactacactgaagacatcaaggtgaccccgatgcaa 41729 Query: 260 cttcgtgacgtcaaggacacgctgatcatgaggaagtttgggcatgttgagccggataac 319 |||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||| Sbjct: 41730 cttcgtgacgtcaaggacacactgatcatgaggaagtttgggaatgttgagcctgataac 41789 Query: 320 tactggtcacgtgtgtgcgagggtgagacagaggccatgatcaaacggccatggcatttc 379 | |||||| ||||| || ||||||||||| ||||| ||||||| || |||||| |||| Sbjct: 41790 ttctggtctcgtgtatgtgagggtgagacggaggcagtgatcaagcgcccatggtattta 41849 Query: 380 ttgtggaagtcgcgccgcttgatggagattgtgtctgccattgcctcccgaatgagttgg 439 |||||||| ||||| || ||||||||||| |||||||||||| ||||||| ||| |||| Sbjct: 41850 ttgtggaaatcgcgtcgattgatggagatcgtgtctgccatttcctcccggatggattgg 41909 Query: 440 gatttcgactcgatgcatgttgtgagaggagagaaagcccagaacacacagctttggcca 499 || || || || | ||||||||||| || |||||||||||||||| |||| | |||||| Sbjct: 41910 gactttgattcagtccatgttgtgaggggggagaaagcccagaacaaacagttgtggcca 41969 Query: 500 aaccttgatgcagatacctcgccagaaaatctccttacgacactcaatgataaggttggt 559 || |||||| |||||| || ||||| | ||||||||||||||| ||||||||||| ||| Sbjct: 41970 aatcttgatagagatacttctccagatagtctccttacgacacttaatgataaggtcggt 42029 Query: 560 gctggacggtatttgtacattgctaccgatgagtccgataaatcgttcttcgaccc 615 ||||| ||| ||||||||||||| ||| |||| |||||||||| ||||| ||||| Sbjct: 42030 gctggccggcatttgtacattgcaaccaatgaacccgataaatcattctttgaccc 42085
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 547 bits (276), Expect = e-152 Identities = 516/596 (86%) Strand = Plus / Plus Query: 20 gaggcgcagttcttgaaccggacgcttgtcatggacttcagcgtctgcctcaattcacgg 79 ||||| |||| |||||||||||| ||||| |||||| | | || ||||||||||||||| Sbjct: 16162601 gaggcacagtacttgaaccggacacttgttatggaccttaatgtgtgcctcaattcacgg 16162660 Query: 80 tataccgccagtggcaaggacgaagaaaaggatttcaggttctactttgattttgagcac 139 ||||| | ||||||||||| ||||| | ||||| ||| |||||||||||||||||||| Sbjct: 16162661 tatacttcaagtggcaaggatgaagagagagattttaggctctactttgattttgagcac 16162720 Query: 140 ctgaaggaatctgcatctgtgatcgaccagagtcagttctggacagactgggggaagtgg 199 ||||| |||| ||||| || || |||||||| |||||||||||||| |||||||||||| Sbjct: 16162721 ttgaagcaatcagcatcggtcattgaccagagccagttctggacagattgggggaagtgg 16162780 Query: 200 cacaagaaggatcgactgaagaatcactatactgaagacatcaaggtgacccccatgaaa 259 |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 16162781 cacaagaaggatagactgaagaatcactacactgaagacatcaaggtgaccccgatgcaa 16162840 Query: 260 cttcgtgacgtcaaggacacgctgatcatgaggaagtttgggcatgttgagccggataac 319 |||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||| Sbjct: 16162841 cttcgtgacgtcaaggacacactgatcatgaggaagtttgggaatgttgagcctgataac 16162900 Query: 320 tactggtcacgtgtgtgcgagggtgagacagaggccatgatcaaacggccatggcatttc 379 | |||||| ||||| || ||||||||||| ||||| ||||||| || |||||| |||| Sbjct: 16162901 ttctggtctcgtgtatgtgagggtgagacggaggcagtgatcaagcgcccatggtattta 16162960 Query: 380 ttgtggaagtcgcgccgcttgatggagattgtgtctgccattgcctcccgaatgagttgg 439 |||||||| ||||| || ||||||||||| |||||||||||| ||||||| ||| |||| Sbjct: 16162961 ttgtggaaatcgcgtcgattgatggagatcgtgtctgccatttcctcccggatggattgg 16163020 Query: 440 gatttcgactcgatgcatgttgtgagaggagagaaagcccagaacacacagctttggcca 499 || || || || | ||||||||||| || |||||||||||||||| |||| | |||||| Sbjct: 16163021 gactttgattcagtccatgttgtgaggggggagaaagcccagaacaaacagttgtggcca 16163080 Query: 500 aaccttgatgcagatacctcgccagaaaatctccttacgacactcaatgataaggttggt 559 || |||||| |||||| || ||||| | ||||||||||||||| ||||||||||| ||| Sbjct: 16163081 aatcttgatagagatacttctccagatagtctccttacgacacttaatgataaggtcggt 16163140 Query: 560 gctggacggtatttgtacattgctaccgatgagtccgataaatcgttcttcgaccc 615 ||||| ||| ||||||||||||| ||| |||| |||||||||| ||||| ||||| Sbjct: 16163141 gctggccggcatttgtacattgcaaccaatgaacccgataaatcattctttgaccc 16163196
>dbj|AK101916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071I02, full insert sequence Length = 2290 Score = 547 bits (276), Expect = e-152 Identities = 516/596 (86%) Strand = Plus / Plus Query: 20 gaggcgcagttcttgaaccggacgcttgtcatggacttcagcgtctgcctcaattcacgg 79 ||||| |||| |||||||||||| ||||| |||||| | | || ||||||||||||||| Sbjct: 1187 gaggcacagtacttgaaccggacacttgttatggaccttaatgtgtgcctcaattcacgg 1246 Query: 80 tataccgccagtggcaaggacgaagaaaaggatttcaggttctactttgattttgagcac 139 ||||| | ||||||||||| ||||| | ||||| ||| |||||||||||||||||||| Sbjct: 1247 tatacttcaagtggcaaggatgaagagagagattttaggctctactttgattttgagcac 1306 Query: 140 ctgaaggaatctgcatctgtgatcgaccagagtcagttctggacagactgggggaagtgg 199 ||||| |||| ||||| || || |||||||| |||||||||||||| |||||||||||| Sbjct: 1307 ttgaagcaatcagcatcggtcattgaccagagccagttctggacagattgggggaagtgg 1366 Query: 200 cacaagaaggatcgactgaagaatcactatactgaagacatcaaggtgacccccatgaaa 259 |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 1367 cacaagaaggatagactgaagaatcactacactgaagacatcaaggtgaccccgatgcaa 1426 Query: 260 cttcgtgacgtcaaggacacgctgatcatgaggaagtttgggcatgttgagccggataac 319 |||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||| Sbjct: 1427 cttcgtgacgtcaaggacacactgatcatgaggaagtttgggaatgttgagcctgataac 1486 Query: 320 tactggtcacgtgtgtgcgagggtgagacagaggccatgatcaaacggccatggcatttc 379 | |||||| ||||| || ||||||||||| ||||| ||||||| || |||||| |||| Sbjct: 1487 ttctggtctcgtgtatgtgagggtgagacggaggcagtgatcaagcgcccatggtattta 1546 Query: 380 ttgtggaagtcgcgccgcttgatggagattgtgtctgccattgcctcccgaatgagttgg 439 |||||||| ||||| || ||||||||||| |||||||||||| ||||||| ||| |||| Sbjct: 1547 ttgtggaaatcgcgtcgattgatggagatcgtgtctgccatttcctcccggatggattgg 1606 Query: 440 gatttcgactcgatgcatgttgtgagaggagagaaagcccagaacacacagctttggcca 499 || || || || | ||||||||||| || |||||||||||||||| |||| | |||||| Sbjct: 1607 gactttgattcagtccatgttgtgaggggggagaaagcccagaacaaacagttgtggcca 1666 Query: 500 aaccttgatgcagatacctcgccagaaaatctccttacgacactcaatgataaggttggt 559 || |||||| |||||| || ||||| | ||||||||||||||| ||||||||||| ||| Sbjct: 1667 aatcttgatagagatacttctccagatagtctccttacgacacttaatgataaggtcggt 1726 Query: 560 gctggacggtatttgtacattgctaccgatgagtccgataaatcgttcttcgaccc 615 ||||| ||| ||||||||||||| ||| |||| |||||||||| ||||| ||||| Sbjct: 1727 gctggccggcatttgtacattgcaaccaatgaacccgataaatcattctttgaccc 1782
>dbj|AK102067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082F19, full insert sequence Length = 2230 Score = 547 bits (276), Expect = e-152 Identities = 516/596 (86%) Strand = Plus / Plus Query: 20 gaggcgcagttcttgaaccggacgcttgtcatggacttcagcgtctgcctcaattcacgg 79 ||||| |||| |||||||||||| ||||| |||||| | | || ||||||||||||||| Sbjct: 1127 gaggcacagtacttgaaccggacacttgttatggaccttaatgtgtgcctcaattcacgg 1186 Query: 80 tataccgccagtggcaaggacgaagaaaaggatttcaggttctactttgattttgagcac 139 ||||| | ||||||||||| ||||| | ||||| ||| |||||||||||||||||||| Sbjct: 1187 tatacttcaagtggcaaggatgaagagagagattttaggctctactttgattttgagcac 1246 Query: 140 ctgaaggaatctgcatctgtgatcgaccagagtcagttctggacagactgggggaagtgg 199 ||||| |||| ||||| || || |||||||| |||||||||||||| |||||||||||| Sbjct: 1247 ttgaagcaatcagcatcggtcattgaccagagccagttctggacagattgggggaagtgg 1306 Query: 200 cacaagaaggatcgactgaagaatcactatactgaagacatcaaggtgacccccatgaaa 259 |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 1307 cacaagaaggatagactgaagaatcactacactgaagacatcaaggtgaccccgatgcaa 1366 Query: 260 cttcgtgacgtcaaggacacgctgatcatgaggaagtttgggcatgttgagccggataac 319 |||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||| Sbjct: 1367 cttcgtgacgtcaaggacacactgatcatgaggaagtttgggaatgttgagcctgataac 1426 Query: 320 tactggtcacgtgtgtgcgagggtgagacagaggccatgatcaaacggccatggcatttc 379 | |||||| ||||| || ||||||||||| ||||| ||||||| || |||||| |||| Sbjct: 1427 ttctggtctcgtgtatgtgagggtgagacggaggcagtgatcaagcgcccatggtattta 1486 Query: 380 ttgtggaagtcgcgccgcttgatggagattgtgtctgccattgcctcccgaatgagttgg 439 |||||||| ||||| || ||||||||||| |||||||||||| ||||||| ||| |||| Sbjct: 1487 ttgtggaaatcgcgtcgattgatggagatcgtgtctgccatttcctcccggatggattgg 1546 Query: 440 gatttcgactcgatgcatgttgtgagaggagagaaagcccagaacacacagctttggcca 499 || || || || | ||||||||||| || |||||||||||||||| |||| | |||||| Sbjct: 1547 gactttgattcagtccatgttgtgaggggggagaaagcccagaacaaacagttgtggcca 1606 Query: 500 aaccttgatgcagatacctcgccagaaaatctccttacgacactcaatgataaggttggt 559 || |||||| |||||| || ||||| | ||||||||||||||| ||||||||||| ||| Sbjct: 1607 aatcttgatagagatacttctccagatagtctccttacgacacttaatgataaggtcggt 1666 Query: 560 gctggacggtatttgtacattgctaccgatgagtccgataaatcgttcttcgaccc 615 ||||| ||| ||||||||||||| ||| |||| |||||||||| ||||| ||||| Sbjct: 1667 gctggccggcatttgtacattgcaaccaatgaacccgataaatcattctttgaccc 1722
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 547 bits (276), Expect = e-152 Identities = 516/596 (86%) Strand = Plus / Plus Query: 20 gaggcgcagttcttgaaccggacgcttgtcatggacttcagcgtctgcctcaattcacgg 79 ||||| |||| |||||||||||| ||||| |||||| | | || ||||||||||||||| Sbjct: 16170842 gaggcacagtacttgaaccggacacttgttatggaccttaatgtgtgcctcaattcacgg 16170901 Query: 80 tataccgccagtggcaaggacgaagaaaaggatttcaggttctactttgattttgagcac 139 ||||| | ||||||||||| ||||| | ||||| ||| |||||||||||||||||||| Sbjct: 16170902 tatacttcaagtggcaaggatgaagagagagattttaggctctactttgattttgagcac 16170961 Query: 140 ctgaaggaatctgcatctgtgatcgaccagagtcagttctggacagactgggggaagtgg 199 ||||| |||| ||||| || || |||||||| |||||||||||||| |||||||||||| Sbjct: 16170962 ttgaagcaatcagcatcggtcattgaccagagccagttctggacagattgggggaagtgg 16171021 Query: 200 cacaagaaggatcgactgaagaatcactatactgaagacatcaaggtgacccccatgaaa 259 |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 16171022 cacaagaaggatagactgaagaatcactacactgaagacatcaaggtgaccccgatgcaa 16171081 Query: 260 cttcgtgacgtcaaggacacgctgatcatgaggaagtttgggcatgttgagccggataac 319 |||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||| Sbjct: 16171082 cttcgtgacgtcaaggacacactgatcatgaggaagtttgggaatgttgagcctgataac 16171141 Query: 320 tactggtcacgtgtgtgcgagggtgagacagaggccatgatcaaacggccatggcatttc 379 | |||||| ||||| || ||||||||||| ||||| ||||||| || |||||| |||| Sbjct: 16171142 ttctggtctcgtgtatgtgagggtgagacggaggcagtgatcaagcgcccatggtattta 16171201 Query: 380 ttgtggaagtcgcgccgcttgatggagattgtgtctgccattgcctcccgaatgagttgg 439 |||||||| ||||| || ||||||||||| |||||||||||| ||||||| ||| |||| Sbjct: 16171202 ttgtggaaatcgcgtcgattgatggagatcgtgtctgccatttcctcccggatggattgg 16171261 Query: 440 gatttcgactcgatgcatgttgtgagaggagagaaagcccagaacacacagctttggcca 499 || || || || | ||||||||||| || |||||||||||||||| |||| | |||||| Sbjct: 16171262 gactttgattcagtccatgttgtgaggggggagaaagcccagaacaaacagttgtggcca 16171321 Query: 500 aaccttgatgcagatacctcgccagaaaatctccttacgacactcaatgataaggttggt 559 || |||||| |||||| || ||||| | ||||||||||||||| ||||||||||| ||| Sbjct: 16171322 aatcttgatagagatacttctccagatagtctccttacgacacttaatgataaggtcggt 16171381 Query: 560 gctggacggtatttgtacattgctaccgatgagtccgataaatcgttcttcgaccc 615 ||||| ||| ||||||||||||| ||| |||| |||||||||| ||||| ||||| Sbjct: 16171382 gctggccggcatttgtacattgcaaccaatgaacccgataaatcattctttgaccc 16171437
>gb|AY110859.1| Zea mays CL41895_1 mRNA sequence Length = 888 Score = 381 bits (192), Expect = e-102 Identities = 333/380 (87%) Strand = Plus / Minus Query: 230 actgaagacatcaaggtgacccccatgaaacttcgtgacgtcaaggacacgctgatcatg 289 ||||||||||||| | ||||||| ||||||||||||||| |||||||||| |||||||| Sbjct: 874 actgaagacatcaggatgaccccaatgaaacttcgtgacatcaaggacacattgatcatg 815 Query: 290 aggaagtttgggcatgttgagccggataactactggtcacgtgtgtgcgagggtgagaca 349 |||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 814 aggaagtttgggaatgttgagcctgataactattggtcacgtgtgtgcgagggtgagact 755 Query: 350 gaggccatgatcaaacggccatggcatttcttgtggaagtcgcgccgcttgatggagatt 409 |||| || ||||| || |||||||||||| ||||||| || || ||||||||||||||| Sbjct: 754 gagggaataatcaagcgcccatggcatttcctgtggaaatctcgtcgcttgatggagatt 695 Query: 410 gtgtctgccattgcctcccgaatgagttgggatttcgactcgatgcatgttgtgagagga 469 || |||||||||||||| || |||| ||||| || |||||| | |||||||| ||||| Sbjct: 694 gtatctgccattgcctcacggatgaactgggactttgactcggtccatgttgtcagaggg 635 Query: 470 gagaaagcccagaacacacagctttggccaaaccttgatgcagatacctcgccagaaaat 529 |||||||| ||||||||||| ||||||||||||||||| ||||||||| ||||| | | Sbjct: 634 gagaaagcgcagaacacacaactttggccaaaccttgacagagatacctcaccagacagt 575 Query: 530 ctccttacgacactcaatgataaggttggtgctggacggtatttgtacattgctaccgat 589 ||||||| | |||| |||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 574 ctccttatggcacttaatgataaggttggtgctggccggtatttgtacattgctaccaat 515 Query: 590 gagtccgataaatcgttctt 609 || | || ||||||||||| Sbjct: 514 gaacctgacaaatcgttctt 495
>emb|CR962137.2| Medicago truncatula chromosome 5 clone mte1-10p15, COMPLETE SEQUENCE Length = 111128 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 455 catgttgtgagaggagagaaagcccagaacacacagctttggccaaaccttgatgcagat 514 ||||||||||||||||| || || ||||| | ||||||||||||| ||||||||| || Sbjct: 20699 catgttgtgagaggagaaaaggcgaggaacaaagagctttggccaaatcttgatgcacat 20758 Query: 515 acctc 519 ||||| Sbjct: 20759 acctc 20763 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 110 gatttcaggttctactttgattttgagcacctgaagga 147 ||||| ||||| ||||||||||||||||| ||||||| Sbjct: 20354 gattttaggttttactttgattttgagcatttgaagga 20391
>ref|NM_126461.2| Arabidopsis thaliana unknown protein AT2G04280 mRNA, complete cds Length = 2272 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 107 aaggatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtg 160 |||||||||||||| ||||||||||| ||||| |||| ||| |||| |||||| Sbjct: 1055 aaggatttcaggttttactttgatttcgagcatttgaaagaagctgcttctgtg 1108
>gb|BT015416.1| Arabidopsis thaliana At2g04280 gene, complete cds Length = 1707 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 107 aaggatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtg 160 |||||||||||||| ||||||||||| ||||| |||| ||| |||| |||||| Sbjct: 949 aaggatttcaggttttactttgatttcgagcatttgaaagaagctgcttctgtg 1002
>gb|AY056207.1| Arabidopsis thaliana unknown protein (At2g04280) mRNA, complete cds Length = 2037 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 107 aaggatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtg 160 |||||||||||||| ||||||||||| ||||| |||| ||| |||| |||||| Sbjct: 1055 aaggatttcaggttttactttgatttcgagcatttgaaagaagctgcttctgtg 1108
>gb|AC007213.6| Arabidopsis thaliana chromosome 2 clone T23O15 map RNS1, complete sequence Length = 81341 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 107 aaggatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtg 160 |||||||||||||| ||||||||||| ||||| |||| ||| |||| |||||| Sbjct: 44182 aaggatttcaggttttactttgatttcgagcatttgaaagaagctgcttctgtg 44235
>ref|XM_741429.1| Aspergillus fumigatus Af293 exo-beta-1,3-glucanase (Afu4g03350) partial mRNA Length = 2340 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 cgtcaaggacacgctgatcat 288 ||||||||||||||||||||| Sbjct: 1353 cgtcaaggacacgctgatcat 1373
>ref|XM_329578.1| Neurospora crassa OR74A hypothetical protein (NCU08534.1) partial mRNA Length = 1545 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gaagtttgggcatgttgagc 311 |||||||||||||||||||| Sbjct: 1090 gaagtttgggcatgttgagc 1071
>ref|XM_957923.1| Neurospora crassa OR74A hypothetical protein (NCU08534.1) partial mRNA Length = 1545 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gaagtttgggcatgttgagc 311 |||||||||||||||||||| Sbjct: 1090 gaagtttgggcatgttgagc 1071
>gb|AC094830.5| Rattus norvegicus 8 BAC CH230-3H18 (Children's Hospital Oakland Research Institute) complete sequence Length = 237199 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 agctttggccaaaccttgat 508 |||||||||||||||||||| Sbjct: 208177 agctttggccaaaccttgat 208196
>gb|AC132142.3| Mus musculus BAC clone RP23-75I5 from chromosome 7, complete sequence Length = 221548 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 atggcatttcttgtggaagt 389 |||||||||||||||||||| Sbjct: 61723 atggcatttcttgtggaagt 61704
>gb|AC121811.2| Mus musculus BAC clone RP23-453O15 from 5, complete sequence Length = 190798 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 aggaagtttgggcatgttga 309 |||||||||||||||||||| Sbjct: 25687 aggaagtttgggcatgttga 25668
>gb|AC004870.2| Homo sapiens PAC clone RP4-739M23 from 7, complete sequence Length = 144546 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 aggatttcaggttctacttt 127 |||||||||||||||||||| Sbjct: 9776 aggatttcaggttctacttt 9795
>emb|AL357353.12| Human DNA sequence from clone RP11-251L16 on chromosome 10, complete sequence Length = 129800 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 agacatcaaggtgaccccca 254 |||||||||||||||||||| Sbjct: 110930 agacatcaaggtgaccccca 110949
>gb|AC158228.3| Mus musculus chromosome 5, clone RP23-118K12, complete sequence Length = 208055 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tttgagcacctgaaggaatc 150 |||||||||||||||||||| Sbjct: 89841 tttgagcacctgaaggaatc 89860
>gb|AC092711.14| Mus musculus chromosome 5, clone RP23-7D3, complete sequence Length = 191727 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 tttgagcacctgaaggaatc 150 |||||||||||||||||||| Sbjct: 132554 tttgagcacctgaaggaatc 132535
>gb|AC006585.8| Arabidopsis thaliana chromosome 2 clone F27C12 map mi238, complete sequence Length = 103495 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 atactgaagacatcaaggtg 247 |||||||||||||||||||| Sbjct: 17859 atactgaagacatcaaggtg 17878
>gb|AC132308.4| Mus musculus BAC clone RP24-292O13 from chromosome 5, complete sequence Length = 184560 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 aggaagtttgggcatgttga 309 |||||||||||||||||||| Sbjct: 172893 aggaagtttgggcatgttga 172874
>gb|AC122736.13| Mus musculus chromosome 7, clone RP23-272F2, complete sequence Length = 226595 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 atggcatttcttgtggaagt 389 |||||||||||||||||||| Sbjct: 5349 atggcatttcttgtggaagt 5368
>gb|AC003686.1|AC003686 Homo sapiens 12q13.1 PAC RPCI1-90J4 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 113457 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 attttgagcacctgaaggaa 148 |||||||||||||||||||| Sbjct: 94892 attttgagcacctgaaggaa 94873
>emb|AL627214.15| Mouse DNA sequence from clone RP23-357K18 on chromosome 4, complete sequence Length = 182829 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 461 gtgagaggagagaaagcccagaac 484 |||||| ||||||||||||||||| Sbjct: 18295 gtgagatgagagaaagcccagaac 18318 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,597,283 Number of Sequences: 3902068 Number of extensions: 4597283 Number of successful extensions: 82871 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82763 Number of HSP's gapped (non-prelim): 108 length of query: 623 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 600 effective length of database: 17,143,297,704 effective search space: 10285978622400 effective search space used: 10285978622400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)