ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags21g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_196817.1| Oryza sativa (japonica cultivar-group) unknown ... 547 e-152
2gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome... 547 e-152
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 547 e-152
4dbj|AK101916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 547 e-152
5dbj|AK102067.1| Oryza sativa (japonica cultivar-group) cDNA clon... 547 e-152
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 547 e-152
7gb|AY110859.1| Zea mays CL41895_1 mRNA sequence 381 e-102
8emb|CR962137.2| Medicago truncatula chromosome 5 clone mte1-10p1... 58 4e-05
9ref|NM_126461.2| Arabidopsis thaliana unknown protein AT2G04280 ... 52 0.002
10gb|BT015416.1| Arabidopsis thaliana At2g04280 gene, complete cds 52 0.002
11gb|AY056207.1| Arabidopsis thaliana unknown protein (At2g04280) ... 52 0.002
12gb|AC007213.6| Arabidopsis thaliana chromosome 2 clone T23O15 ma... 52 0.002
13ref|XM_741429.1| Aspergillus fumigatus Af293 exo-beta-1,3-glucan... 42 2.1
14ref|XM_329578.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.5
15ref|XM_957923.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.5
16gb|AC094830.5| Rattus norvegicus 8 BAC CH230-3H18 (Children's Ho... 40 8.5
17gb|AC132142.3| Mus musculus BAC clone RP23-75I5 from chromosome ... 40 8.5
18gb|AC121811.2| Mus musculus BAC clone RP23-453O15 from 5, comple... 40 8.5
19gb|AC004870.2| Homo sapiens PAC clone RP4-739M23 from 7, complet... 40 8.5
20emb|AL357353.12| Human DNA sequence from clone RP11-251L16 on ch... 40 8.5
21gb|AC158228.3| Mus musculus chromosome 5, clone RP23-118K12, com... 40 8.5
22gb|AC092711.14| Mus musculus chromosome 5, clone RP23-7D3, compl... 40 8.5
23gb|AC006585.8| Arabidopsis thaliana chromosome 2 clone F27C12 ma... 40 8.5
24gb|AC132308.4| Mus musculus BAC clone RP24-292O13 from chromosom... 40 8.5
25gb|AC122736.13| Mus musculus chromosome 7, clone RP23-272F2, com... 40 8.5
26gb|AC003686.1|AC003686 Homo sapiens 12q13.1 PAC RPCI1-90J4 (Rosw... 40 8.5
27emb|AL627214.15| Mouse DNA sequence from clone RP23-357K18 on ch... 40 8.5

>ref|NM_196817.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0018F16.3), mRNA
          Length = 2157

 Score =  547 bits (276), Expect = e-152
 Identities = 516/596 (86%)
 Strand = Plus / Plus

                                                                        
Query: 20   gaggcgcagttcttgaaccggacgcttgtcatggacttcagcgtctgcctcaattcacgg 79
            ||||| |||| |||||||||||| ||||| |||||| | |  || |||||||||||||||
Sbjct: 1084 gaggcacagtacttgaaccggacacttgttatggaccttaatgtgtgcctcaattcacgg 1143

                                                                        
Query: 80   tataccgccagtggcaaggacgaagaaaaggatttcaggttctactttgattttgagcac 139
            |||||  | ||||||||||| ||||| |  ||||| ||| ||||||||||||||||||||
Sbjct: 1144 tatacttcaagtggcaaggatgaagagagagattttaggctctactttgattttgagcac 1203

                                                                        
Query: 140  ctgaaggaatctgcatctgtgatcgaccagagtcagttctggacagactgggggaagtgg 199
             ||||| |||| ||||| || || |||||||| |||||||||||||| ||||||||||||
Sbjct: 1204 ttgaagcaatcagcatcggtcattgaccagagccagttctggacagattgggggaagtgg 1263

                                                                        
Query: 200  cacaagaaggatcgactgaagaatcactatactgaagacatcaaggtgacccccatgaaa 259
            |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| ||
Sbjct: 1264 cacaagaaggatagactgaagaatcactacactgaagacatcaaggtgaccccgatgcaa 1323

                                                                        
Query: 260  cttcgtgacgtcaaggacacgctgatcatgaggaagtttgggcatgttgagccggataac 319
            |||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 1324 cttcgtgacgtcaaggacacactgatcatgaggaagtttgggaatgttgagcctgataac 1383

                                                                        
Query: 320  tactggtcacgtgtgtgcgagggtgagacagaggccatgatcaaacggccatggcatttc 379
            | |||||| ||||| || ||||||||||| |||||  ||||||| || |||||| |||| 
Sbjct: 1384 ttctggtctcgtgtatgtgagggtgagacggaggcagtgatcaagcgcccatggtattta 1443

                                                                        
Query: 380  ttgtggaagtcgcgccgcttgatggagattgtgtctgccattgcctcccgaatgagttgg 439
            |||||||| ||||| || ||||||||||| |||||||||||| ||||||| |||  ||||
Sbjct: 1444 ttgtggaaatcgcgtcgattgatggagatcgtgtctgccatttcctcccggatggattgg 1503

                                                                        
Query: 440  gatttcgactcgatgcatgttgtgagaggagagaaagcccagaacacacagctttggcca 499
            || || || ||  | ||||||||||| || |||||||||||||||| |||| | ||||||
Sbjct: 1504 gactttgattcagtccatgttgtgaggggggagaaagcccagaacaaacagttgtggcca 1563

                                                                        
Query: 500  aaccttgatgcagatacctcgccagaaaatctccttacgacactcaatgataaggttggt 559
            || ||||||  |||||| || ||||| | ||||||||||||||| ||||||||||| |||
Sbjct: 1564 aatcttgatagagatacttctccagatagtctccttacgacacttaatgataaggtcggt 1623

                                                                    
Query: 560  gctggacggtatttgtacattgctaccgatgagtccgataaatcgttcttcgaccc 615
            ||||| ||| ||||||||||||| ||| ||||  |||||||||| ||||| |||||
Sbjct: 1624 gctggccggcatttgtacattgcaaccaatgaacccgataaatcattctttgaccc 1679



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>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
             complete sequence
          Length = 179157

 Score =  547 bits (276), Expect = e-152
 Identities = 516/596 (86%)
 Strand = Plus / Plus

                                                                         
Query: 20    gaggcgcagttcttgaaccggacgcttgtcatggacttcagcgtctgcctcaattcacgg 79
             ||||| |||| |||||||||||| ||||| |||||| | |  || |||||||||||||||
Sbjct: 41490 gaggcacagtacttgaaccggacacttgttatggaccttaatgtgtgcctcaattcacgg 41549

                                                                         
Query: 80    tataccgccagtggcaaggacgaagaaaaggatttcaggttctactttgattttgagcac 139
             |||||  | ||||||||||| ||||| |  ||||| ||| ||||||||||||||||||||
Sbjct: 41550 tatacttcaagtggcaaggatgaagagagagattttaggctctactttgattttgagcac 41609

                                                                         
Query: 140   ctgaaggaatctgcatctgtgatcgaccagagtcagttctggacagactgggggaagtgg 199
              ||||| |||| ||||| || || |||||||| |||||||||||||| ||||||||||||
Sbjct: 41610 ttgaagcaatcagcatcggtcattgaccagagccagttctggacagattgggggaagtgg 41669

                                                                         
Query: 200   cacaagaaggatcgactgaagaatcactatactgaagacatcaaggtgacccccatgaaa 259
             |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| ||
Sbjct: 41670 cacaagaaggatagactgaagaatcactacactgaagacatcaaggtgaccccgatgcaa 41729

                                                                         
Query: 260   cttcgtgacgtcaaggacacgctgatcatgaggaagtttgggcatgttgagccggataac 319
             |||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 41730 cttcgtgacgtcaaggacacactgatcatgaggaagtttgggaatgttgagcctgataac 41789

                                                                         
Query: 320   tactggtcacgtgtgtgcgagggtgagacagaggccatgatcaaacggccatggcatttc 379
             | |||||| ||||| || ||||||||||| |||||  ||||||| || |||||| |||| 
Sbjct: 41790 ttctggtctcgtgtatgtgagggtgagacggaggcagtgatcaagcgcccatggtattta 41849

                                                                         
Query: 380   ttgtggaagtcgcgccgcttgatggagattgtgtctgccattgcctcccgaatgagttgg 439
             |||||||| ||||| || ||||||||||| |||||||||||| ||||||| |||  ||||
Sbjct: 41850 ttgtggaaatcgcgtcgattgatggagatcgtgtctgccatttcctcccggatggattgg 41909

                                                                         
Query: 440   gatttcgactcgatgcatgttgtgagaggagagaaagcccagaacacacagctttggcca 499
             || || || ||  | ||||||||||| || |||||||||||||||| |||| | ||||||
Sbjct: 41910 gactttgattcagtccatgttgtgaggggggagaaagcccagaacaaacagttgtggcca 41969

                                                                         
Query: 500   aaccttgatgcagatacctcgccagaaaatctccttacgacactcaatgataaggttggt 559
             || ||||||  |||||| || ||||| | ||||||||||||||| ||||||||||| |||
Sbjct: 41970 aatcttgatagagatacttctccagatagtctccttacgacacttaatgataaggtcggt 42029

                                                                     
Query: 560   gctggacggtatttgtacattgctaccgatgagtccgataaatcgttcttcgaccc 615
             ||||| ||| ||||||||||||| ||| ||||  |||||||||| ||||| |||||
Sbjct: 42030 gctggccggcatttgtacattgcaaccaatgaacccgataaatcattctttgaccc 42085



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  547 bits (276), Expect = e-152
 Identities = 516/596 (86%)
 Strand = Plus / Plus

                                                                            
Query: 20       gaggcgcagttcttgaaccggacgcttgtcatggacttcagcgtctgcctcaattcacgg 79
                ||||| |||| |||||||||||| ||||| |||||| | |  || |||||||||||||||
Sbjct: 16162601 gaggcacagtacttgaaccggacacttgttatggaccttaatgtgtgcctcaattcacgg 16162660

                                                                            
Query: 80       tataccgccagtggcaaggacgaagaaaaggatttcaggttctactttgattttgagcac 139
                |||||  | ||||||||||| ||||| |  ||||| ||| ||||||||||||||||||||
Sbjct: 16162661 tatacttcaagtggcaaggatgaagagagagattttaggctctactttgattttgagcac 16162720

                                                                            
Query: 140      ctgaaggaatctgcatctgtgatcgaccagagtcagttctggacagactgggggaagtgg 199
                 ||||| |||| ||||| || || |||||||| |||||||||||||| ||||||||||||
Sbjct: 16162721 ttgaagcaatcagcatcggtcattgaccagagccagttctggacagattgggggaagtgg 16162780

                                                                            
Query: 200      cacaagaaggatcgactgaagaatcactatactgaagacatcaaggtgacccccatgaaa 259
                |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| ||
Sbjct: 16162781 cacaagaaggatagactgaagaatcactacactgaagacatcaaggtgaccccgatgcaa 16162840

                                                                            
Query: 260      cttcgtgacgtcaaggacacgctgatcatgaggaagtttgggcatgttgagccggataac 319
                |||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 16162841 cttcgtgacgtcaaggacacactgatcatgaggaagtttgggaatgttgagcctgataac 16162900

                                                                            
Query: 320      tactggtcacgtgtgtgcgagggtgagacagaggccatgatcaaacggccatggcatttc 379
                | |||||| ||||| || ||||||||||| |||||  ||||||| || |||||| |||| 
Sbjct: 16162901 ttctggtctcgtgtatgtgagggtgagacggaggcagtgatcaagcgcccatggtattta 16162960

                                                                            
Query: 380      ttgtggaagtcgcgccgcttgatggagattgtgtctgccattgcctcccgaatgagttgg 439
                |||||||| ||||| || ||||||||||| |||||||||||| ||||||| |||  ||||
Sbjct: 16162961 ttgtggaaatcgcgtcgattgatggagatcgtgtctgccatttcctcccggatggattgg 16163020

                                                                            
Query: 440      gatttcgactcgatgcatgttgtgagaggagagaaagcccagaacacacagctttggcca 499
                || || || ||  | ||||||||||| || |||||||||||||||| |||| | ||||||
Sbjct: 16163021 gactttgattcagtccatgttgtgaggggggagaaagcccagaacaaacagttgtggcca 16163080

                                                                            
Query: 500      aaccttgatgcagatacctcgccagaaaatctccttacgacactcaatgataaggttggt 559
                || ||||||  |||||| || ||||| | ||||||||||||||| ||||||||||| |||
Sbjct: 16163081 aatcttgatagagatacttctccagatagtctccttacgacacttaatgataaggtcggt 16163140

                                                                        
Query: 560      gctggacggtatttgtacattgctaccgatgagtccgataaatcgttcttcgaccc 615
                ||||| ||| ||||||||||||| ||| ||||  |||||||||| ||||| |||||
Sbjct: 16163141 gctggccggcatttgtacattgcaaccaatgaacccgataaatcattctttgaccc 16163196



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>dbj|AK101916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071I02, full
            insert sequence
          Length = 2290

 Score =  547 bits (276), Expect = e-152
 Identities = 516/596 (86%)
 Strand = Plus / Plus

                                                                        
Query: 20   gaggcgcagttcttgaaccggacgcttgtcatggacttcagcgtctgcctcaattcacgg 79
            ||||| |||| |||||||||||| ||||| |||||| | |  || |||||||||||||||
Sbjct: 1187 gaggcacagtacttgaaccggacacttgttatggaccttaatgtgtgcctcaattcacgg 1246

                                                                        
Query: 80   tataccgccagtggcaaggacgaagaaaaggatttcaggttctactttgattttgagcac 139
            |||||  | ||||||||||| ||||| |  ||||| ||| ||||||||||||||||||||
Sbjct: 1247 tatacttcaagtggcaaggatgaagagagagattttaggctctactttgattttgagcac 1306

                                                                        
Query: 140  ctgaaggaatctgcatctgtgatcgaccagagtcagttctggacagactgggggaagtgg 199
             ||||| |||| ||||| || || |||||||| |||||||||||||| ||||||||||||
Sbjct: 1307 ttgaagcaatcagcatcggtcattgaccagagccagttctggacagattgggggaagtgg 1366

                                                                        
Query: 200  cacaagaaggatcgactgaagaatcactatactgaagacatcaaggtgacccccatgaaa 259
            |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| ||
Sbjct: 1367 cacaagaaggatagactgaagaatcactacactgaagacatcaaggtgaccccgatgcaa 1426

                                                                        
Query: 260  cttcgtgacgtcaaggacacgctgatcatgaggaagtttgggcatgttgagccggataac 319
            |||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 1427 cttcgtgacgtcaaggacacactgatcatgaggaagtttgggaatgttgagcctgataac 1486

                                                                        
Query: 320  tactggtcacgtgtgtgcgagggtgagacagaggccatgatcaaacggccatggcatttc 379
            | |||||| ||||| || ||||||||||| |||||  ||||||| || |||||| |||| 
Sbjct: 1487 ttctggtctcgtgtatgtgagggtgagacggaggcagtgatcaagcgcccatggtattta 1546

                                                                        
Query: 380  ttgtggaagtcgcgccgcttgatggagattgtgtctgccattgcctcccgaatgagttgg 439
            |||||||| ||||| || ||||||||||| |||||||||||| ||||||| |||  ||||
Sbjct: 1547 ttgtggaaatcgcgtcgattgatggagatcgtgtctgccatttcctcccggatggattgg 1606

                                                                        
Query: 440  gatttcgactcgatgcatgttgtgagaggagagaaagcccagaacacacagctttggcca 499
            || || || ||  | ||||||||||| || |||||||||||||||| |||| | ||||||
Sbjct: 1607 gactttgattcagtccatgttgtgaggggggagaaagcccagaacaaacagttgtggcca 1666

                                                                        
Query: 500  aaccttgatgcagatacctcgccagaaaatctccttacgacactcaatgataaggttggt 559
            || ||||||  |||||| || ||||| | ||||||||||||||| ||||||||||| |||
Sbjct: 1667 aatcttgatagagatacttctccagatagtctccttacgacacttaatgataaggtcggt 1726

                                                                    
Query: 560  gctggacggtatttgtacattgctaccgatgagtccgataaatcgttcttcgaccc 615
            ||||| ||| ||||||||||||| ||| ||||  |||||||||| ||||| |||||
Sbjct: 1727 gctggccggcatttgtacattgcaaccaatgaacccgataaatcattctttgaccc 1782



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>dbj|AK102067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082F19, full
            insert sequence
          Length = 2230

 Score =  547 bits (276), Expect = e-152
 Identities = 516/596 (86%)
 Strand = Plus / Plus

                                                                        
Query: 20   gaggcgcagttcttgaaccggacgcttgtcatggacttcagcgtctgcctcaattcacgg 79
            ||||| |||| |||||||||||| ||||| |||||| | |  || |||||||||||||||
Sbjct: 1127 gaggcacagtacttgaaccggacacttgttatggaccttaatgtgtgcctcaattcacgg 1186

                                                                        
Query: 80   tataccgccagtggcaaggacgaagaaaaggatttcaggttctactttgattttgagcac 139
            |||||  | ||||||||||| ||||| |  ||||| ||| ||||||||||||||||||||
Sbjct: 1187 tatacttcaagtggcaaggatgaagagagagattttaggctctactttgattttgagcac 1246

                                                                        
Query: 140  ctgaaggaatctgcatctgtgatcgaccagagtcagttctggacagactgggggaagtgg 199
             ||||| |||| ||||| || || |||||||| |||||||||||||| ||||||||||||
Sbjct: 1247 ttgaagcaatcagcatcggtcattgaccagagccagttctggacagattgggggaagtgg 1306

                                                                        
Query: 200  cacaagaaggatcgactgaagaatcactatactgaagacatcaaggtgacccccatgaaa 259
            |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| ||
Sbjct: 1307 cacaagaaggatagactgaagaatcactacactgaagacatcaaggtgaccccgatgcaa 1366

                                                                        
Query: 260  cttcgtgacgtcaaggacacgctgatcatgaggaagtttgggcatgttgagccggataac 319
            |||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 1367 cttcgtgacgtcaaggacacactgatcatgaggaagtttgggaatgttgagcctgataac 1426

                                                                        
Query: 320  tactggtcacgtgtgtgcgagggtgagacagaggccatgatcaaacggccatggcatttc 379
            | |||||| ||||| || ||||||||||| |||||  ||||||| || |||||| |||| 
Sbjct: 1427 ttctggtctcgtgtatgtgagggtgagacggaggcagtgatcaagcgcccatggtattta 1486

                                                                        
Query: 380  ttgtggaagtcgcgccgcttgatggagattgtgtctgccattgcctcccgaatgagttgg 439
            |||||||| ||||| || ||||||||||| |||||||||||| ||||||| |||  ||||
Sbjct: 1487 ttgtggaaatcgcgtcgattgatggagatcgtgtctgccatttcctcccggatggattgg 1546

                                                                        
Query: 440  gatttcgactcgatgcatgttgtgagaggagagaaagcccagaacacacagctttggcca 499
            || || || ||  | ||||||||||| || |||||||||||||||| |||| | ||||||
Sbjct: 1547 gactttgattcagtccatgttgtgaggggggagaaagcccagaacaaacagttgtggcca 1606

                                                                        
Query: 500  aaccttgatgcagatacctcgccagaaaatctccttacgacactcaatgataaggttggt 559
            || ||||||  |||||| || ||||| | ||||||||||||||| ||||||||||| |||
Sbjct: 1607 aatcttgatagagatacttctccagatagtctccttacgacacttaatgataaggtcggt 1666

                                                                    
Query: 560  gctggacggtatttgtacattgctaccgatgagtccgataaatcgttcttcgaccc 615
            ||||| ||| ||||||||||||| ||| ||||  |||||||||| ||||| |||||
Sbjct: 1667 gctggccggcatttgtacattgcaaccaatgaacccgataaatcattctttgaccc 1722



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  547 bits (276), Expect = e-152
 Identities = 516/596 (86%)
 Strand = Plus / Plus

                                                                            
Query: 20       gaggcgcagttcttgaaccggacgcttgtcatggacttcagcgtctgcctcaattcacgg 79
                ||||| |||| |||||||||||| ||||| |||||| | |  || |||||||||||||||
Sbjct: 16170842 gaggcacagtacttgaaccggacacttgttatggaccttaatgtgtgcctcaattcacgg 16170901

                                                                            
Query: 80       tataccgccagtggcaaggacgaagaaaaggatttcaggttctactttgattttgagcac 139
                |||||  | ||||||||||| ||||| |  ||||| ||| ||||||||||||||||||||
Sbjct: 16170902 tatacttcaagtggcaaggatgaagagagagattttaggctctactttgattttgagcac 16170961

                                                                            
Query: 140      ctgaaggaatctgcatctgtgatcgaccagagtcagttctggacagactgggggaagtgg 199
                 ||||| |||| ||||| || || |||||||| |||||||||||||| ||||||||||||
Sbjct: 16170962 ttgaagcaatcagcatcggtcattgaccagagccagttctggacagattgggggaagtgg 16171021

                                                                            
Query: 200      cacaagaaggatcgactgaagaatcactatactgaagacatcaaggtgacccccatgaaa 259
                |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| ||
Sbjct: 16171022 cacaagaaggatagactgaagaatcactacactgaagacatcaaggtgaccccgatgcaa 16171081

                                                                            
Query: 260      cttcgtgacgtcaaggacacgctgatcatgaggaagtttgggcatgttgagccggataac 319
                |||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 16171082 cttcgtgacgtcaaggacacactgatcatgaggaagtttgggaatgttgagcctgataac 16171141

                                                                            
Query: 320      tactggtcacgtgtgtgcgagggtgagacagaggccatgatcaaacggccatggcatttc 379
                | |||||| ||||| || ||||||||||| |||||  ||||||| || |||||| |||| 
Sbjct: 16171142 ttctggtctcgtgtatgtgagggtgagacggaggcagtgatcaagcgcccatggtattta 16171201

                                                                            
Query: 380      ttgtggaagtcgcgccgcttgatggagattgtgtctgccattgcctcccgaatgagttgg 439
                |||||||| ||||| || ||||||||||| |||||||||||| ||||||| |||  ||||
Sbjct: 16171202 ttgtggaaatcgcgtcgattgatggagatcgtgtctgccatttcctcccggatggattgg 16171261

                                                                            
Query: 440      gatttcgactcgatgcatgttgtgagaggagagaaagcccagaacacacagctttggcca 499
                || || || ||  | ||||||||||| || |||||||||||||||| |||| | ||||||
Sbjct: 16171262 gactttgattcagtccatgttgtgaggggggagaaagcccagaacaaacagttgtggcca 16171321

                                                                            
Query: 500      aaccttgatgcagatacctcgccagaaaatctccttacgacactcaatgataaggttggt 559
                || ||||||  |||||| || ||||| | ||||||||||||||| ||||||||||| |||
Sbjct: 16171322 aatcttgatagagatacttctccagatagtctccttacgacacttaatgataaggtcggt 16171381

                                                                        
Query: 560      gctggacggtatttgtacattgctaccgatgagtccgataaatcgttcttcgaccc 615
                ||||| ||| ||||||||||||| ||| ||||  |||||||||| ||||| |||||
Sbjct: 16171382 gctggccggcatttgtacattgcaaccaatgaacccgataaatcattctttgaccc 16171437



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>gb|AY110859.1| Zea mays CL41895_1 mRNA sequence
          Length = 888

 Score =  381 bits (192), Expect = e-102
 Identities = 333/380 (87%)
 Strand = Plus / Minus

                                                                       
Query: 230 actgaagacatcaaggtgacccccatgaaacttcgtgacgtcaaggacacgctgatcatg 289
           ||||||||||||| | ||||||| ||||||||||||||| ||||||||||  ||||||||
Sbjct: 874 actgaagacatcaggatgaccccaatgaaacttcgtgacatcaaggacacattgatcatg 815

                                                                       
Query: 290 aggaagtttgggcatgttgagccggataactactggtcacgtgtgtgcgagggtgagaca 349
           |||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| 
Sbjct: 814 aggaagtttgggaatgttgagcctgataactattggtcacgtgtgtgcgagggtgagact 755

                                                                       
Query: 350 gaggccatgatcaaacggccatggcatttcttgtggaagtcgcgccgcttgatggagatt 409
           ||||  || ||||| || |||||||||||| ||||||| || || |||||||||||||||
Sbjct: 754 gagggaataatcaagcgcccatggcatttcctgtggaaatctcgtcgcttgatggagatt 695

                                                                       
Query: 410 gtgtctgccattgcctcccgaatgagttgggatttcgactcgatgcatgttgtgagagga 469
           || |||||||||||||| || ||||  ||||| || |||||| | |||||||| ||||| 
Sbjct: 694 gtatctgccattgcctcacggatgaactgggactttgactcggtccatgttgtcagaggg 635

                                                                       
Query: 470 gagaaagcccagaacacacagctttggccaaaccttgatgcagatacctcgccagaaaat 529
           |||||||| ||||||||||| |||||||||||||||||   ||||||||| ||||| | |
Sbjct: 634 gagaaagcgcagaacacacaactttggccaaaccttgacagagatacctcaccagacagt 575

                                                                       
Query: 530 ctccttacgacactcaatgataaggttggtgctggacggtatttgtacattgctaccgat 589
           ||||||| | |||| |||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 574 ctccttatggcacttaatgataaggttggtgctggccggtatttgtacattgctaccaat 515

                               
Query: 590 gagtccgataaatcgttctt 609
           ||  | || |||||||||||
Sbjct: 514 gaacctgacaaatcgttctt 495



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>emb|CR962137.2| Medicago truncatula chromosome 5 clone mte1-10p15, COMPLETE SEQUENCE
          Length = 111128

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 455   catgttgtgagaggagagaaagcccagaacacacagctttggccaaaccttgatgcagat 514
             ||||||||||||||||| || ||   ||||| | ||||||||||||| ||||||||| ||
Sbjct: 20699 catgttgtgagaggagaaaaggcgaggaacaaagagctttggccaaatcttgatgcacat 20758

                  
Query: 515   acctc 519
             |||||
Sbjct: 20759 acctc 20763



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 110   gatttcaggttctactttgattttgagcacctgaagga 147
             ||||| ||||| |||||||||||||||||  |||||||
Sbjct: 20354 gattttaggttttactttgattttgagcatttgaagga 20391



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>ref|NM_126461.2| Arabidopsis thaliana unknown protein AT2G04280 mRNA, complete cds
          Length = 2272

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 107  aaggatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtg 160
            |||||||||||||| ||||||||||| |||||  |||| ||| |||| ||||||
Sbjct: 1055 aaggatttcaggttttactttgatttcgagcatttgaaagaagctgcttctgtg 1108



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>gb|BT015416.1| Arabidopsis thaliana At2g04280 gene, complete cds
          Length = 1707

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 107  aaggatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtg 160
            |||||||||||||| ||||||||||| |||||  |||| ||| |||| ||||||
Sbjct: 949  aaggatttcaggttttactttgatttcgagcatttgaaagaagctgcttctgtg 1002



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>gb|AY056207.1| Arabidopsis thaliana unknown protein (At2g04280) mRNA, complete cds
          Length = 2037

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 107  aaggatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtg 160
            |||||||||||||| ||||||||||| |||||  |||| ||| |||| ||||||
Sbjct: 1055 aaggatttcaggttttactttgatttcgagcatttgaaagaagctgcttctgtg 1108



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>gb|AC007213.6| Arabidopsis thaliana chromosome 2 clone T23O15 map RNS1, complete
             sequence
          Length = 81341

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                   
Query: 107   aaggatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtg 160
             |||||||||||||| ||||||||||| |||||  |||| ||| |||| ||||||
Sbjct: 44182 aaggatttcaggttttactttgatttcgagcatttgaaagaagctgcttctgtg 44235



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>ref|XM_741429.1| Aspergillus fumigatus Af293 exo-beta-1,3-glucanase (Afu4g03350)
            partial mRNA
          Length = 2340

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 268  cgtcaaggacacgctgatcat 288
            |||||||||||||||||||||
Sbjct: 1353 cgtcaaggacacgctgatcat 1373



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>ref|XM_329578.1| Neurospora crassa OR74A hypothetical protein (NCU08534.1) partial
            mRNA
          Length = 1545

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  gaagtttgggcatgttgagc 311
            ||||||||||||||||||||
Sbjct: 1090 gaagtttgggcatgttgagc 1071



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>ref|XM_957923.1| Neurospora crassa OR74A hypothetical protein (NCU08534.1) partial
            mRNA
          Length = 1545

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  gaagtttgggcatgttgagc 311
            ||||||||||||||||||||
Sbjct: 1090 gaagtttgggcatgttgagc 1071



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>gb|AC094830.5| Rattus norvegicus 8 BAC CH230-3H18 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237199

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 489    agctttggccaaaccttgat 508
              ||||||||||||||||||||
Sbjct: 208177 agctttggccaaaccttgat 208196



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>gb|AC132142.3| Mus musculus BAC clone RP23-75I5 from chromosome 7, complete sequence
          Length = 221548

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 370   atggcatttcttgtggaagt 389
             ||||||||||||||||||||
Sbjct: 61723 atggcatttcttgtggaagt 61704



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>gb|AC121811.2| Mus musculus BAC clone RP23-453O15 from 5, complete sequence
          Length = 190798

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   aggaagtttgggcatgttga 309
             ||||||||||||||||||||
Sbjct: 25687 aggaagtttgggcatgttga 25668



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>gb|AC004870.2| Homo sapiens PAC clone RP4-739M23 from 7, complete sequence
          Length = 144546

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  aggatttcaggttctacttt 127
            ||||||||||||||||||||
Sbjct: 9776 aggatttcaggttctacttt 9795



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>emb|AL357353.12| Human DNA sequence from clone RP11-251L16 on chromosome 10, complete
              sequence
          Length = 129800

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    agacatcaaggtgaccccca 254
              ||||||||||||||||||||
Sbjct: 110930 agacatcaaggtgaccccca 110949



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>gb|AC158228.3| Mus musculus chromosome 5, clone RP23-118K12, complete sequence
          Length = 208055

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   tttgagcacctgaaggaatc 150
             ||||||||||||||||||||
Sbjct: 89841 tttgagcacctgaaggaatc 89860



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>gb|AC092711.14| Mus musculus chromosome 5, clone RP23-7D3, complete sequence
          Length = 191727

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    tttgagcacctgaaggaatc 150
              ||||||||||||||||||||
Sbjct: 132554 tttgagcacctgaaggaatc 132535



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>gb|AC006585.8| Arabidopsis thaliana chromosome 2 clone F27C12 map mi238, complete
             sequence
          Length = 103495

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   atactgaagacatcaaggtg 247
             ||||||||||||||||||||
Sbjct: 17859 atactgaagacatcaaggtg 17878



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>gb|AC132308.4| Mus musculus BAC clone RP24-292O13 from chromosome 5, complete sequence
          Length = 184560

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    aggaagtttgggcatgttga 309
              ||||||||||||||||||||
Sbjct: 172893 aggaagtttgggcatgttga 172874



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>gb|AC122736.13| Mus musculus chromosome 7, clone RP23-272F2, complete sequence
          Length = 226595

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 370  atggcatttcttgtggaagt 389
            ||||||||||||||||||||
Sbjct: 5349 atggcatttcttgtggaagt 5368



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>gb|AC003686.1|AC003686 Homo sapiens 12q13.1 PAC RPCI1-90J4 (Roswell Park Cancer Institute
             Human PAC library) complete sequence
          Length = 113457

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   attttgagcacctgaaggaa 148
             ||||||||||||||||||||
Sbjct: 94892 attttgagcacctgaaggaa 94873



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>emb|AL627214.15| Mouse DNA sequence from clone RP23-357K18 on chromosome 4, complete
             sequence
          Length = 182829

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 461   gtgagaggagagaaagcccagaac 484
             |||||| |||||||||||||||||
Sbjct: 18295 gtgagatgagagaaagcccagaac 18318


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,597,283
Number of Sequences: 3902068
Number of extensions: 4597283
Number of successful extensions: 82871
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82763
Number of HSP's gapped (non-prelim): 108
length of query: 623
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 600
effective length of database: 17,143,297,704
effective search space: 10285978622400
effective search space used: 10285978622400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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