>AROK_PYRKO (Q5JFT2) Shikimate kinase (EC 2.7.1.71) (SK)|
          Length = 271

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 21/79 (26%), Positives = 39/79 (49%)
 Frame = +1

Query: 214 LIRNLAHYFSRRANWEFSARNSLAISSTPLLIKARKESCSFSSLRK*LLYSNCVDMKPLT 393
           L++ +A  F  +   EF  +  +  S  P+ +  +  S + ++L K L  +  +DM  + 
Sbjct: 56  LVKAVADVFREKTGEEFGIKFRIE-SEIPIAMGLKSSSAAANALSKALADALGLDMSEME 114

Query: 394 LVSISSNFAKRASKSLSGA 450
           +V      AKRA  +L+GA
Sbjct: 115 VVKAGVEAAKRAGVTLTGA 133

>Y101_ARCFU (O30135) Hypothetical protein AF0101|
          Length = 216

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
 Frame = -2

Query: 560 FTNLPFSFTFFVRLFVR--PFSRPLFVCLCACLPARARMAPLRD-----FDARFAKLEEI 402
           F NLP S+T++V  F +  P +  L +  C+     A + PLR+      D ++ K+ +I
Sbjct: 28  FINLPSSYTYYVTSFDKKLPKNVTLIIPTCSLNGDIAEIKPLREGNISLLDTQYGKMIKI 87

Query: 401 ETSVKGFMS 375
           E    G ++
Sbjct: 88  EAEEVGHIT 96

>OPGD_SALTY (Q8ZPB3) Glucans biosynthesis protein D precursor|
          Length = 551

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
 Frame = -1

Query: 165 ENH----EDLKVLGVAPIESLFSC 106
           ENH    +D+K LG+AP+ S+FSC
Sbjct: 260 ENHLYARKDIKQLGIAPMTSMFSC 283

>OPGD_SALTI (Q8Z765) Glucans biosynthesis protein D precursor|
          Length = 551

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
 Frame = -1

Query: 165 ENH----EDLKVLGVAPIESLFSC 106
           ENH    +D+K LG+AP+ S+FSC
Sbjct: 260 ENHLYARKDIKQLGIAPMTSMFSC 283

>OPGD_ECOLI (P40120) Glucans biosynthesis protein D precursor|
          Length = 551

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
 Frame = -1

Query: 165 ENH----EDLKVLGVAPIESLFSC 106
           ENH    +D+K LG+AP+ S+FSC
Sbjct: 260 ENHLYARKDIKQLGIAPMTSMFSC 283

>OPGD_ECOL6 (Q8CW34) Glucans biosynthesis protein D precursor|
          Length = 551

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
 Frame = -1

Query: 165 ENH----EDLKVLGVAPIESLFSC 106
           ENH    +D+K LG+AP+ S+FSC
Sbjct: 260 ENHLYARKDIKQLGIAPMTSMFSC 283

>OPGD_ECO57 (Q8X9V1) Glucans biosynthesis protein D precursor|
          Length = 551

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
 Frame = -1

Query: 165 ENH----EDLKVLGVAPIESLFSC 106
           ENH    +D+K LG+AP+ S+FSC
Sbjct: 260 ENHLYARKDIKQLGIAPMTSMFSC 283


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,866,802
Number of Sequences: 219361
Number of extensions: 1487867
Number of successful extensions: 4576
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4576
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)