ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags21g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF509779.1| Hordeum vulgare subsp. vulgare isolate RSB416 Rpg... 331 2e-87
2gb|AF509770.1| Hordeum vulgare subsp. vulgare isolate NRG046 Rpg... 331 2e-87
3gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones B... 266 8e-68
4gb|U76261.1|HVU76261 Hordeum vulgare highly repeated, retrotrans... 256 8e-65
5gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 151 3e-33
6gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 143 8e-31
7gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones B... 135 2e-28
8gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic prote... 113 7e-22
9gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 109 1e-20
10gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence 90 1e-14
11gb|DQ175982.1| Hordeum vulgare subsp. vulgare clone 41-39A-RB fl... 78 4e-11
12gb|DQ175972.1| Hordeum vulgare subsp. vulgare clone 40-32A-LB fl... 78 4e-11
13gb|DQ175971.1| Hordeum vulgare subsp. vulgare clone 40-32A-RB fl... 78 4e-11
14emb|CR626926.1| Aegilops tauschii 74 6e-10
15gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence 74 6e-10
16gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene lo... 72 3e-09
17gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete seq... 72 3e-09
18gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 ge... 72 3e-09
19gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156... 72 3e-09
20gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, comple... 66 2e-07
21gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 64 6e-07
22gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial c... 64 6e-07
23gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspa... 58 4e-05
24gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete se... 58 4e-05
25gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene,... 46 0.15
26gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, comp... 44 0.57
27gb|AC174642.2| Mus musculus BAC clone RP24-362N12 from chromosom... 44 0.57
28gb|AC159708.13| Mus musculus 10 BAC RP23-110M21 (Roswell Park Ca... 42 2.3
29emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segme... 42 2.3
30gb|AC161825.13| Mus musculus 10 BAC RP23-35O24 (Roswell Park Can... 42 2.3
31gb|AC153155.6| Mus musculus BAC clone RP23-25J23 from chromosome... 42 2.3
32dbj|AK136014.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 42 2.3
33emb|X83999.1|STNADHBS S.tuberosum mRNA for NADH dehydrogenase, N... 42 2.3
34ref|NM_112148.3| Arabidopsis thaliana ATMRP8 AT3G13090 (ATMRP8) ... 40 9.0
35gb|AC150392.2| Branchiostoma floridae clone CH302-12P3, complete... 40 9.0
36gb|AY730594.1| Salmonella enterica subsp. salamae serovar Greens... 40 9.0
37ref|XM_424669.1| PREDICTED: Gallus gallus similar to glypican-1 ... 40 9.0
38ref|XM_422590.1| PREDICTED: Gallus gallus similar to glypican-1 ... 40 9.0
39ref|XM_459562.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 9.0
40gb|AY150229.1| Meleagris gallopavo glypican precursor, mRNA, par... 40 9.0
41gb|AC132590.3| Mus musculus BAC clone RP24-273G1 from chromosome... 40 9.0
42gb|AY052368.1| Arabidopsis thaliana ATP-binding cassette transpo... 40 9.0
43emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 40 9.0
44gb|AF526000.1| Falco columbarius CHD1Z gene, intron A 40 9.0
45gb|AC104209.7| Homo sapiens chromosome 18, clone RP11-653G8, com... 40 9.0
46gb|AC009455.9| Homo sapiens chromosome 18, clone RP11-169F17, co... 40 9.0
47gb|AY551002.1| Meleagris gallopavo glypican-1 precursor mRNA, co... 40 9.0
48emb|AJ235843.1|CPU235843 Cinchona pubescens chloroplast ndhF gene 40 9.0
49gb|AC004985.2| Homo sapiens PAC clone RP5-1165K10 from 7, comple... 40 9.0
50gb|AC133435.2| Homo sapiens 3 BAC RP11-343B5 (Roswell Park Cance... 40 9.0
51dbj|AP000375.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 9.0 
>gb|AF509779.1| Hordeum vulgare subsp. vulgare isolate RSB416 Rpg1 region, genomic
           sequence
          Length = 825

 Score =  331 bits (167), Expect = 2e-87
 Identities = 339/395 (85%), Gaps = 1/395 (0%)
 Strand = Plus / Minus

                                                                       
Query: 91  atcattaggtttgacacaagaaaacaaagattcaatgggagccacaccaagcactttaag 150
           ||||||||||||||||| | ||||||| ||||||||||||| ||||| ||||||||||||
Sbjct: 539 atcattaggtttgacactaaaaaacaaggattcaatgggagtcacacgaagcactttaag 480

                                                                       
Query: 151 atcttcgtgattctcatcacgagtttcgggtttagcaaccattttattgactaaagtagc 210
           |||||||||||||||||||| | |||| ||||||| | |||||||||||||||| |||||
Sbjct: 479 atcttcgtgattctcatcacaaatttcaggtttagaagccattttattgactaaggtagc 420

                                                                       
Query: 211 ttgcttatcagaaatctggcc-cactacttttcaagacgagcaaactgggagttcagcgc 269
            || |||||| ||||||||||   | | ||||||||||| |||||||| || || |||||
Sbjct: 419 ctgtttatcaaaaatctggcctgccaatttttcaagacgggcaaactgagaatttagcgc 360

                                                                       
Query: 270 aaggaattcgttggccatatcatcaactcctctactcataaaagccagaaaagaatcttg 329
           ||||||||| |||||||||| || |||| || || |||||||||||  |||||||| |||
Sbjct: 359 aaggaattctttggccatatgattaacttctttattcataaaagcccaaaaagaattttg 300

                                                                       
Query: 330 ctccttcagctctctacggaagtaattattatattcaaactgcgtagacatgaagccttt 389
           |||| | ||||||||| | |||||| ||||||| |||||||| |||||||||||||| ||
Sbjct: 299 ctcccttagctctctatgcaagtaactattataatcaaactgtgtagacatgaagccgtt 240

                                                                       
Query: 390 aacactagtttcaatctcttccaactttgcaaagcgagcatcaaaatcccttagtggggc 449
           ||||||||||||||||||||||||| ||| | ||  ||||||| ||||| || || ||||
Sbjct: 239 aacactagtttcaatctcttccaaccttgtatagtaagcatcataatcctttggttgggc 180

                                              
Query: 450 cattcgggctctagcaggcaagcaagcacacaagc 484
           ||| | ||   ||||||||| |||||| |||||||
Sbjct: 179 catacaggtcttagcaggcaggcaagcgcacaagc 145



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 598 agtaaatgcaagagatgagtttgcgacacctacttggat 636
           ||||||||||||||||||||| ||||||| |||||||||
Sbjct: 45  agtaaatgcaagagatgagttcgcgacacttacttggat 7



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 558 gaagtgggggagaggaaaacgagagg 583
           ||||||||||||||||||||||||||
Sbjct: 76  gaagtgggggagaggaaaacgagagg 51



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 40/44 (90%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                       
Query: 9   aatgcttttagcatcaagnatagatggactccgaatccttgggg 52
           ||||||||||| |||||| |||||| ||||||||||| ||||||
Sbjct: 588 aatgcttttagaatcaag-atagatagactccgaatcattgggg 546
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>gb|AF509770.1| Hordeum vulgare subsp. vulgare isolate NRG046 Rpg1 region, genomic
           sequence
          Length = 825

 Score =  331 bits (167), Expect = 2e-87
 Identities = 339/395 (85%), Gaps = 1/395 (0%)
 Strand = Plus / Minus

                                                                       
Query: 91  atcattaggtttgacacaagaaaacaaagattcaatgggagccacaccaagcactttaag 150
           ||||||||||||||||| | ||||||| ||||||||||||| ||||| ||||||||||||
Sbjct: 539 atcattaggtttgacactaaaaaacaaggattcaatgggagtcacacgaagcactttaag 480

                                                                       
Query: 151 atcttcgtgattctcatcacgagtttcgggtttagcaaccattttattgactaaagtagc 210
           |||||||||||||||||||| | |||| ||||||| | |||||||||||||||| |||||
Sbjct: 479 atcttcgtgattctcatcacaaatttcaggtttagaagccattttattgactaaggtagc 420

                                                                       
Query: 211 ttgcttatcagaaatctggcc-cactacttttcaagacgagcaaactgggagttcagcgc 269
            || |||||| ||||||||||   | | ||||||||||| |||||||| || || |||||
Sbjct: 419 ctgtttatcaaaaatctggcctgccaatttttcaagacgggcaaactgagaatttagcgc 360

                                                                       
Query: 270 aaggaattcgttggccatatcatcaactcctctactcataaaagccagaaaagaatcttg 329
           ||||||||| |||||||||| || |||| || || |||||||||||  |||||||| |||
Sbjct: 359 aaggaattctttggccatatgattaacttctttattcataaaagcccaaaaagaattttg 300

                                                                       
Query: 330 ctccttcagctctctacggaagtaattattatattcaaactgcgtagacatgaagccttt 389
           |||| | ||||||||| | |||||| ||||||| |||||||| |||||||||||||| ||
Sbjct: 299 ctcccttagctctctatgcaagtaactattataatcaaactgtgtagacatgaagccgtt 240

                                                                       
Query: 390 aacactagtttcaatctcttccaactttgcaaagcgagcatcaaaatcccttagtggggc 449
           ||||||||||||||||||||||||| ||| | ||  ||||||| ||||| || || ||||
Sbjct: 239 aacactagtttcaatctcttccaaccttgtatagtaagcatcataatcctttggttgggc 180

                                              
Query: 450 cattcgggctctagcaggcaagcaagcacacaagc 484
           ||| | ||   ||||||||| |||||| |||||||
Sbjct: 179 catacaggtcttagcaggcaggcaagcgcacaagc 145



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 598 agtaaatgcaagagatgagtttgcgacacctacttggat 636
           ||||||||||||||||||||| ||||||| |||||||||
Sbjct: 45  agtaaatgcaagagatgagttcgcgacacttacttggat 7



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 558 gaagtgggggagaggaaaacgagagg 583
           ||||||||||||||||||||||||||
Sbjct: 76  gaagtgggggagaggaaaacgagagg 51



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 40/44 (90%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                       
Query: 9   aatgcttttagcatcaagnatagatggactccgaatccttgggg 52
           ||||||||||| |||||| |||||| ||||||||||| ||||||
Sbjct: 588 aatgcttttagaatcaag-atagatagactccgaatcattgggg 546
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>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness
             locus region
          Length = 129099

 Score =  266 bits (134), Expect = 8e-68
 Identities = 156/162 (96%), Gaps = 1/162 (0%)
 Strand = Plus / Plus

                                                                         
Query: 12    gcttttagcatcaagnatagatggactccgaatccttggggcacttttcaaccaaagtgg 71
             ||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 42276 gcttttagcatcaag-atagatggactccgaaccattggggcacttttcaaccaaagtgg 42334

                                                                         
Query: 72    attcatacccagccccataatcattaggtttgacacaagaaaacaaagattcaatgggag 131
             ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42335 attcatatccagccccataatcattaggtttgacacaagaaaacaaagattcaatgggag 42394

                                                       
Query: 132   ccacaccaagcactttaagatcttcgtgattctcatcacgag 173
              |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 42395 tcacaccaagcacttaaagatcttcgtgattctcatcacgag 42436



 Score =  184 bits (93), Expect = 2e-43
 Identities = 102/105 (97%)
 Strand = Plus / Plus

                                                                         
Query: 545   aaggcaaattggtgaagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaat 604
             |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 43711 aaggcaaattggtgaagtgggggagaggaaaacgagaggcaactggcaaacaaagtaaat 43770

                                                          
Query: 605   gcaagagatgagtttgcgacacctacttggatgagttcttgactt 649
             |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 43771 gcaagagatgagtttgcgacacttacttggatgagttcttgactt 43815
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>gb|U76261.1|HVU76261 Hordeum vulgare highly repeated, retrotransposon-like sequence
          Length = 5050

 Score =  256 bits (129), Expect = 8e-65
 Identities = 157/165 (95%), Gaps = 1/165 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    aatgcttttagcatcaagnatagatggactccgaatccttggggcacttttcaaccaaag 68
            |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4982 aatgcttttagcatcaag-atagatggactccgaatcattggggcacttttcaaccaaag 4924

                                                                        
Query: 69   tggattcatacccagccccataatcattaggtttgacacaagaaaacaaagattcaatgg 128
            ||||||||||   ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4923 tggattcatatatagccccataatcattgggtttgacacaagaaaacaaagattcaatgg 4864

                                                         
Query: 129  gagccacaccaagcactttaagatcttcgtgattctcatcacgag 173
            ||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4863 gattcacaccaagcactttaagatcttcgtgattctcatcacgag 4819



 Score =  192 bits (97), Expect = 1e-45
 Identities = 109/113 (96%)
 Strand = Plus / Minus

                                                                        
Query: 545  aaggcaaattggtgaagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaat 604
            |||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||
Sbjct: 3523 aaggcaaattggtgaagtgggggagaggaaaacgagaggcaactcgcaaacaaagtaaat 3464

                                                                 
Query: 605  gcaagagatgagtttgcgacacctacttggatgagttcttgacttaatcttcc 657
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3463 gcaagagatgagtttgcgacacctacttggatgagttcttgacttgatcttcc 3411
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>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete
             sequence
          Length = 101158

 Score =  151 bits (76), Expect = 3e-33
 Identities = 131/148 (88%), Gaps = 1/148 (0%)
 Strand = Plus / Minus

                                                                         
Query: 15    tttagcatcaagnatagatggactccgaatccttggggcacttttcaaccaaagtggatt 74
             |||| ||||||| |||| ||||||||||||| |||||||  |||||||||||||||||||
Sbjct: 21218 tttatcatcaag-ataggtggactccgaatcattggggcgtttttcaaccaaagtggatt 21160

                                                                         
Query: 75    catacccagccccataatcattaggtttgacacaagaaaacaaagattcaatgggagcca 134
             |||| ||||||||   || | ||||||||||||  ||||||||||||||||  |||| ||
Sbjct: 21159 catatccagcccctccataaataggtttgacacgcgaaaacaaagattcaagaggagaca 21100

                                         
Query: 135   caccaagcactttaagatcttcgtgatt 162
             ||||||||||||||||||||||||||||
Sbjct: 21099 caccaagcactttaagatcttcgtgatt 21072



 Score =  105 bits (53), Expect = 2e-19
 Identities = 74/81 (91%)
 Strand = Plus / Minus

                                                                         
Query: 556   gtgaagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaatgcaagagatga 615
             ||||||||||||||||||||||||||||||| ||||||  | ||||||||||||||| ||
Sbjct: 19752 gtgaagtgggggagaggaaaacgagaggcaactggcaacaaaagtaaatgcaagagaaga 19693

                                  
Query: 616   gtttgcgacacctacttggat 636
             ||||| || ||||||||||||
Sbjct: 19692 gtttgtgagacctacttggat 19672
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>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13,
             complete sequence
          Length = 102842

 Score =  143 bits (72), Expect = 8e-31
 Identities = 130/148 (87%), Gaps = 1/148 (0%)
 Strand = Plus / Minus

                                                                         
Query: 15    tttagcatcaagnatagatggactccgaatccttggggcacttttcaaccaaagtggatt 74
             |||| ||||||| |||| ||| ||||||||| |||||||  |||||||||||||||||||
Sbjct: 88693 tttatcatcaag-ataggtgggctccgaatcattggggcgtttttcaaccaaagtggatt 88635

                                                                         
Query: 75    catacccagccccataatcattaggtttgacacaagaaaacaaagattcaatgggagcca 134
             |||| |||||||| | ||||  |||||||||||  ||||||||||||||||  |||| ||
Sbjct: 88634 catatccagccccttcatcaacaggtttgacacgcgaaaacaaagattcaaaaggagtca 88575

                                         
Query: 135   caccaagcactttaagatcttcgtgatt 162
             ||||||||||||||||||| ||||||||
Sbjct: 88574 caccaagcactttaagatcctcgtgatt 88547



 Score =  135 bits (68), Expect = 2e-28
 Identities = 129/148 (87%), Gaps = 1/148 (0%)
 Strand = Plus / Plus

                                                                         
Query: 15    tttagcatcaagnatagatggactccgaatccttggggcacttttcaaccaaagtggatt 74
             |||| ||||||| |||| ||||||||||||  |||||||  |||| ||||||||||||||
Sbjct: 18805 tttatcatcaag-ataggtggactccgaattattggggcgttttttaaccaaagtggatt 18863

                                                                         
Query: 75    catacccagccccataatcattaggtttgacacaagaaaacaaagattcaatgggagcca 134
             |||| |||||||| | |||| | |||||||||   ||||||||||||||||  |||| ||
Sbjct: 18864 catatccagccccttcatcaatcggtttgacatgcgaaaacaaagattcaagaggagtca 18923

                                         
Query: 135   caccaagcactttaagatcttcgtgatt 162
             ||||||||||||||||||||||||||||
Sbjct: 18924 caccaagcactttaagatcttcgtgatt 18951



 Score =  121 bits (61), Expect = 3e-24
 Identities = 76/81 (93%)
 Strand = Plus / Minus

                                                                         
Query: 556   gtgaagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaatgcaagagatga 615
             ||||||||||||||||||||||||||||||| ||||||| |  |||||||||||||||||
Sbjct: 87153 gtgaagtgggggagaggaaaacgagaggcaactggcaaaaaaggtaaatgcaagagatga 87094

                                  
Query: 616   gtttgcgacacctacttggat 636
             ||||| |||||||||||||||
Sbjct: 87093 gtttgtgacacctacttggat 87073



 Score =  101 bits (51), Expect = 3e-18
 Identities = 88/99 (88%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                         
Query: 556   gtgaagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaatgcaagagatga 615
             ||||||||||||||||||| ||||| ||||| ||||||| |  |||||||||||||||||
Sbjct: 29166 gtgaagtgggggagaggaagacgagtggcaactggcaaaaaaggtaaatgcaagagatga 29225

                                                    
Query: 616   gtttgcgacacctacttggatgagttcttgacttaatct 654
             |||||  |||||||||||||| || ||||||||| ||||
Sbjct: 29226 gtttgtcacacctacttggat-agatcttgacttgatct 29263



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 96/111 (86%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                        
Query: 15   tttagcatcaagnatagatggactccgaatccttggggcacttttcaaccaaagtggatt 74
            |||| ||||||| |||| ||||||||||||| |||||||| |||||||||||||||| ||
Sbjct: 8751 tttatcatcaag-ataggtggactccgaatcattggggcatttttcaaccaaagtggttt 8693

                                                               
Query: 75   catacccagccccataatcattaggtttgacacaagaaaacaaagattcaa 125
            |||| ||||||||   || | |||||||||||   ||||||||||||||||
Sbjct: 8692 catatccagcccctccataagtaggtttgacaagcgaaaacaaagattcaa 8642



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                         
Query: 558   gaagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaatgcaagagatgagt 617
             ||||||||||||||||||||||| |||||  || ||| |  |||||||||||||||||||
Sbjct: 53908 gaagtgggggagaggaaaacgagtggcaaaaggaaaataatgtaaatgcaagagatgagt 53967

                   
Query: 618   ttgcga 623
             ||||||
Sbjct: 53968 ttgcga 53973
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>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness
             locus region
          Length = 160897

 Score =  135 bits (68), Expect = 2e-28
 Identities = 129/148 (87%), Gaps = 1/148 (0%)
 Strand = Plus / Minus

                                                                         
Query: 15    tttagcatcaagnatagatggactccgaatccttggggcacttttcaaccaaagtggatt 74
             |||| ||||||| |||| ||||||||||||| ||||||   |||||||| ||||||||||
Sbjct: 80371 tttatcatcaag-ataggtggactccgaatcattggggtgtttttcaacaaaagtggatt 80313

                                                                         
Query: 75    catacccagccccataatcattaggtttgacacaagaaaacaaagattcaatgggagcca 134
             |||| ||||||||   || | ||||||||||||  ||||||||||||||||  |||| ||
Sbjct: 80312 catatccagcccctccataagtaggtttgacacgcgaaaacaaagattcaagaggagaca 80253

                                         
Query: 135   caccaagcactttaagatcttcgtgatt 162
             ||||||||||||||||||||||||||||
Sbjct: 80252 caccaagcactttaagatcttcgtgatt 80225



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                         
Query: 556   gtgaagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaatgcaagagatga 615
             ||||||||||||||||||||||||||||||| ||||||  | ||||||||||||||| ||
Sbjct: 78891 gtgaagtgggggagaggaaaacgagaggcaactggcaacaaaagtaaatgcaagagaaga 78832

                              
Query: 616   gtttgcgacacctactt 632
             ||||| || ||||||||
Sbjct: 78831 gtttgtgagacctactt 78815
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>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast
             intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes,
             complete cds
          Length = 65979

 Score =  113 bits (57), Expect = 7e-22
 Identities = 75/81 (92%)
 Strand = Plus / Plus

                                                                         
Query: 556   gtgaagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaatgcaagagatga 615
             ||||||||||||||||||||||||||||||| ||||||  | ||||||||||||||||||
Sbjct: 31656 gtgaagtgggggagaggaaaacgagaggcaactggcaacaaaagtaaatgcaagagatga 31715

                                  
Query: 616   gtttgcgacacctacttggat 636
             ||||| || ||||||||||||
Sbjct: 31716 gtttgtgagacctacttggat 31736
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>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score =  109 bits (55), Expect = 1e-20
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                          
Query: 56     ttttcaaccaaagtggattcatacccagccccataatcattaggtttgacacaagaaaac 115
              ||||||||||||||||||||||| ||||||||   || | ||||||||||||  ||||||
Sbjct: 254856 ttttcaaccaaagtggattcatatccagcccctccataagtaggtttgacacgtgaaaac 254915

                                                             
Query: 116    aaagattcaatgggagccacaccaagcactttaagatcttcgtgatt 162
              |||||||||   |||| ||||||||||| ||||||||||||||||||
Sbjct: 254916 aaagattcaggaggagacacaccaagcattttaagatcttcgtgatt 254962



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                          
Query: 556    gtgaagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaatgcaagagatga 615
              |||||||||||||||||||||||| |||||| ||||||  | ||||||||||||||| ||
Sbjct: 256295 gtgaagtgggggagaggaaaacgacaggcaactggcaacaaaagtaaatgcaagagaaga 256354

                                   
Query: 616    gtttgcgacacctacttggat 636
              ||||| || ||||||||||||
Sbjct: 256355 gtttgtgagacctacttggat 256375
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>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence
          Length = 77136

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                       
Query: 556 gtgaagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaatgcaagagatga 615
           ||||||||||||||||||||||||||||||| ||||||  | | | ||||||||||| ||
Sbjct: 562 gtgaagtgggggagaggaaaacgagaggcaactggcaacaaaactgaatgcaagagaaga 621

                                
Query: 616 gtttgcgacacctacttggat 636
           ||||| || ||||||||||||
Sbjct: 622 gtttgtgagacctacttggat 642
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>gb|DQ175982.1| Hordeum vulgare subsp. vulgare clone 41-39A-RB flanking T-DNA
           insertion sequence
          Length = 354

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 558 gaagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaatgcaagagatgagt 617
           |||||||||||| |||||||||| || || ||||||| | ||||||||||||||||||||
Sbjct: 188 gaagtgggggaggggaaaacgagggggaaatggcaaataaagtaaatgcaagagatgagt 247

              
Query: 618 ttg 620
           |||
Sbjct: 248 ttg 250
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>gb|DQ175972.1| Hordeum vulgare subsp. vulgare clone 40-32A-LB flanking T-DNA
           insertion sequence
          Length = 174

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 558 gaagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaatgcaagagatgagt 617
           |||||||||||| |||||||||| || || ||||||| | ||||||||||||||||||||
Sbjct: 8   gaagtgggggaggggaaaacgagggggaaatggcaaataaagtaaatgcaagagatgagt 67

              
Query: 618 ttg 620
           |||
Sbjct: 68  ttg 70
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>gb|DQ175971.1| Hordeum vulgare subsp. vulgare clone 40-32A-RB flanking T-DNA
           insertion sequence
          Length = 421

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                       
Query: 558 gaagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaatgcaagagatgagt 617
           |||||||||||| |||||||||| || || ||||||| | ||||||||||||||||||||
Sbjct: 180 gaagtgggggaggggaaaacgagggggaaatggcaaataaagtaaatgcaagagatgagt 121

              
Query: 618 ttg 620
           |||
Sbjct: 120 ttg 118
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>emb|CR626926.1| Aegilops tauschii
          Length = 94421

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                      
Query: 554   tggtgaagtgggggagaggaaaacgagaggcaagtggcaaa 594
             ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 72548 tggtgaagtgggggagaggaaaacgagaggcaaatggcaaa 72588
to top
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence
          Length = 184425

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                          
Query: 559    aagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaatgcaagagatgagtt 618
              |||||||||| | || |||||||||||| ||||||| |  ||||||||||||||||||||
Sbjct: 184225 aagtgggggacacgagaacgagaggcaaatggcaaataatgtaaatgcaagagatgagtt 184166

                   
Query: 619    tgcga 623
              |||||
Sbjct: 184165 tgcga 184161



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                             
Query: 387    tttaacactagtttcaatctcttccaacttt 417
              |||||||||||||||||||||||||||||||
Sbjct: 184402 tttaacactagtttcaatctcttccaacttt 184372
to top
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence
          Length = 307015

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                      
Query: 555    ggtgaagtgggggagaggaaaacgagaggcaagtggcaaa 594
              |||||||||||||||||||||||||||||||| |||||||
Sbjct: 133303 ggtgaagtgggggagaggaaaacgagaggcaaatggcaaa 133342



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                   
Query: 555    ggtgaagtgggggagaggaaaacgagaggcaagtggc 591
              |||||||||||||||||||||||||||||||| ||||
Sbjct: 150585 ggtgaagtgggggagaggaaaacgagaggcaaatggc 150549



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 562    tgggggagaggaaaacgagaggcaa 586
              ||||||||||||||| |||||||||
Sbjct: 198625 tgggggagaggaaaatgagaggcaa 198649
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>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence
          Length = 101101

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                     
Query: 555   ggtgaagtgggggagaggaaaacgagaggcaagtggcaaa 594
             |||||||||||||||||||||||||||||||| |||||||
Sbjct: 39759 ggtgaagtgggggagaggaaaacgagaggcaaatggcaaa 39798
to top
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence
          Length = 215241

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                     
Query: 555   ggtgaagtgggggagaggaaaacgagaggcaagtggcaaa 594
             |||||||||||||||||||||||||||||||| |||||||
Sbjct: 15210 ggtgaagtgggggagaggaaaacgagaggcaaatggcaaa 15249



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 31/32 (96%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                              
Query: 555    ggtgaagtgggggagaggaaaacgagaggcaa 586
              ||||||||||||| ||||||||||||||||||
Sbjct: 139643 ggtgaagtggggg-gaggaaaacgagaggcaa 139673
to top
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence
          Length = 187012

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                      
Query: 555    ggtgaagtgggggagaggaaaacgagaggcaagtggcaaa 594
              |||||||||||||||||||||||||||||||| |||||||
Sbjct: 106484 ggtgaagtgggggagaggaaaacgagaggcaaatggcaaa 106445



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                     
Query: 555    ggtgaagtgggggagaggaaaacgagaggcaagtggcaa 593
              |||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 129742 ggtgaagtaggggagaggaaaatgagaggcaaatggcaa 129704
to top
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence
          Length = 142018

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                  
Query: 558   gaagtgggggagaggaaaacgagaggcaagtggcaaa 594
             ||||||||||||||||||||||||||||| |||||||
Sbjct: 34020 gaagtgggggagaggaaaacgagaggcaaatggcaaa 33984
to top
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                              
Query: 555    ggtgaagtgggggagaggaaaacgagaggcaa 586
              ||||||||||||||||||||||||||||||||
Sbjct: 108302 ggtgaagtgggggagaggaaaacgagaggcaa 108271



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 556    gtgaagtgggggagaggaaaacgagaggcaa 586
              |||||||||||||||| ||||||| ||||||
Sbjct: 125330 gtgaagtgggggagagaaaaacgaaaggcaa 125360
to top
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative
             chromosome condensation factor (CCF), putative resistance
             protein (RGA-2), putative resistance protein (RGA2) and
             putative nodulin-like-like protein (NLL) gene, complete
             cds; and retrotransposons Josephine, Angela-2, Angela-4,
             Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6,
             Angela-5, Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 555   ggtgaagtgggggagaggaaaacgagaggcaagtggcaaa 594
             |||||||||||||||||||||| ||||||||| |||||||
Sbjct: 85058 ggtgaagtgggggagaggaaaatgagaggcaaatggcaaa 85019
to top
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete
              sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12
              (WM1.12) genes, complete cds; transposons Ophelia2,
              Angela3s, and XJ3, complete sequence; LRR protein WM1.3
              (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1,
              Jody, Angela, and XJ and Stowaway MITE, complete sequence;
              LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1)
              genes, complete cds; transposons XJ, XA, Angela, and Fred
              and WM1.11 gene, complete sequence; RPM1-like sequence and
              LRR protein WM1.10 (WM1.10) genes, complete cds; and
              transposon XJ, complete sequence
          Length = 198649

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/64 (87%), Gaps = 2/64 (3%)
 Strand = Plus / Minus

                                                                          
Query: 559    aagtgggggagaggaaaacgagaggcaagtggcaaacagagtaaatgcaa--gagatgag 616
              |||||||||||||||||||||||||||| ||| ||| |  |||||||| |  ||||||||
Sbjct: 154741 aagtgggggagaggaaaacgagaggcaaatggaaaataatgtaaatgcgagggagatgag 154682

                  
Query: 617    tttg 620
              ||||
Sbjct: 154681 tttg 154678
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>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence
          Length = 285444

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                           
Query: 555    ggtgaagtgggggagaggaaaacgagagg 583
              |||||||||||||||||||||||||||||
Sbjct: 227503 ggtgaagtgggggagaggaaaacgagagg 227531



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                              
Query: 563    gggggagaggaaaacgagaggcaagtggcaaa 594
              |||||||||||||||||||||||| |||||||
Sbjct: 177386 gggggagaggaaaacgagaggcaaatggcaaa 177417



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                      
Query: 555   ggtgaagtggggga-gaggaaaacgagaggcaagtggcaaa 594
             |||||| ||||||| |||||||||||||||||| |||||||
Sbjct: 23633 ggtgaattgggggaagaggaaaacgagaggcaaatggcaaa 23673
to top
>gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene, partial cds; seed
             globulin (Glo-2) gene, complete cds; HMW-glutenin
             (Glu-Dty) gene, Glu-Dty-T2 allele, complete cds; and
             HMW-glutenin (HMW) gene, HMW-Dtx2 allele, complete cds
          Length = 102842

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 564   ggggagaggaaaacgagaggcaagtggcaaa 594
             ||||||||||||||||||||| | |||||||
Sbjct: 20987 ggggagaggaaaacgagaggcgaatggcaaa 20957
to top
>gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, complete sequence
          Length = 254081

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 299    ctctactcataaaagccagaaa 320
              ||||||||||||||||||||||
Sbjct: 168667 ctctactcataaaagccagaaa 168688
to top
>gb|AC174642.2| Mus musculus BAC clone RP24-362N12 from chromosome 7, complete sequence
          Length = 144527

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 299    ctctactcataaaagccagaaa 320
              ||||||||||||||||||||||
Sbjct: 137769 ctctactcataaaagccagaaa 137748
to top
>gb|AC159708.13| Mus musculus 10 BAC RP23-110M21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 238622

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 300    tctactcataaaagccagaaa 320
              |||||||||||||||||||||
Sbjct: 116803 tctactcataaaagccagaaa 116823
to top
>emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segment 5/6
          Length = 305600

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 175    ttcgggtttagcaaccatttt 195
              |||||||||||||||||||||
Sbjct: 184556 ttcgggtttagcaaccatttt 184536
to top
>gb|AC161825.13| Mus musculus 10 BAC RP23-35O24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 199841

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 300   tctactcataaaagccagaaa 320
             |||||||||||||||||||||
Sbjct: 22379 tctactcataaaagccagaaa 22359
to top
>gb|AC153155.6| Mus musculus BAC clone RP23-25J23 from chromosome 18, complete sequence
          Length = 227880

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 299   ctctactcataaaagccagaa 319
             |||||||||||||||||||||
Sbjct: 74074 ctctactcataaaagccagaa 74054
to top
>dbj|AK136014.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
           enriched library, clone:7420447F13
           product:unclassifiable, full insert sequence
          Length = 1122

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 300 tctactcataaaagccagaaa 320
           |||||||||||||||||||||
Sbjct: 427 tctactcataaaagccagaaa 447
to top
>emb|X83999.1|STNADHBS S.tuberosum mRNA for NADH dehydrogenase, NADH-binding subunit
            (complex I)
          Length = 1827

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 400  tcaatctcttccaactttgca 420
            |||||||||||||||||||||
Sbjct: 1374 tcaatctcttccaactttgca 1354
to top
>ref|NM_112148.3| Arabidopsis thaliana ATMRP8 AT3G13090 (ATMRP8) mRNA, complete cds
          Length = 4401

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 404  tctcttccaactttgcaaag 423
            ||||||||||||||||||||
Sbjct: 1348 tctcttccaactttgcaaag 1329
to top
>gb|AC150392.2| Branchiostoma floridae clone CH302-12P3, complete sequence
          Length = 180902

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 565    gggagaggaaaacgagaggcaagt 588
              |||||||||||| |||||||||||
Sbjct: 106475 gggagaggaaaaagagaggcaagt 106452
to top
>gb|AY730594.1| Salmonella enterica subsp. salamae serovar Greenside UDP-GlcNAc
             4-epimerase (gne), UDP-glucose pyrophosporylase (galF),
             complete cds; O-antigen gene cluster, complete sequence;
             6-phosphogluconate dehydrogenase (gnd), putative
             GDP-colitose biosynthetic protein (col1), putative
             GDP-colitose biosynthetic protein (col2),
             UDP-glucose-6-dehydrogenase (ugd), O-antigen chain length
             determinant (wzz), and phosphoribosyl-AMP cyclohydrolase
             (hisI) genes, complete cds
          Length = 21532

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 91    atcattaggtttgacacaagaaaa 114
             ||||||||||||||||| ||||||
Sbjct: 15771 atcattaggtttgacactagaaaa 15748
to top
>ref|XM_424669.1| PREDICTED: Gallus gallus similar to glypican-1 precursor (LOC427075),
            partial mRNA
          Length = 1309

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 107  caagaaaacaaagattcaat 126
            ||||||||||||||||||||
Sbjct: 1028 caagaaaacaaagattcaat 1047
to top
>ref|XM_422590.1| PREDICTED: Gallus gallus similar to glypican-1 precursor (LOC424770),
            mRNA
          Length = 2149

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 107  caagaaaacaaagattcaat 126
            ||||||||||||||||||||
Sbjct: 1342 caagaaaacaaagattcaat 1361
to top
>ref|XM_459562.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E06325g)
           partial mRNA
          Length = 1593

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 601 aaatgcaagagatgagtttg 620
           ||||||||||||||||||||
Sbjct: 318 aaatgcaagagatgagtttg 337
to top
>gb|AY150229.1| Meleagris gallopavo glypican precursor, mRNA, partial cds
          Length = 330

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 caagaaaacaaagattcaat 126
           ||||||||||||||||||||
Sbjct: 193 caagaaaacaaagattcaat 212
to top
>gb|AC132590.3| Mus musculus BAC clone RP24-273G1 from chromosome 14, complete sequence
          Length = 161371

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   gcaggcaagcaagcacacaa 482
             ||||||||||||||||||||
Sbjct: 35046 gcaggcaagcaagcacacaa 35065
to top
>gb|AY052368.1| Arabidopsis thaliana ATP-binding cassette transporter MRP6 mRNA,
            complete cds
          Length = 4401

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 404  tctcttccaactttgcaaag 423
            ||||||||||||||||||||
Sbjct: 1348 tctcttccaactttgcaaag 1329
to top
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
              hansenii
          Length = 2037969

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 601    aaatgcaagagatgagtttg 620
              ||||||||||||||||||||
Sbjct: 463142 aaatgcaagagatgagtttg 463161
to top
>gb|AF526000.1| Falco columbarius CHD1Z gene, intron A
          Length = 483

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 349 aagtaattattatattcaaa 368
           ||||||||||||||||||||
Sbjct: 457 aagtaattattatattcaaa 438
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>gb|AC104209.7| Homo sapiens chromosome 18, clone RP11-653G8, complete sequence
          Length = 210849

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 210   cttgcttatcagaaatctggccca 233
             ||||||||||||| ||||||||||
Sbjct: 76702 cttgcttatcagatatctggccca 76725
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>gb|AC009455.9| Homo sapiens chromosome 18, clone RP11-169F17, complete sequence
          Length = 191356

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   ttttcaagacgagcaaactg 257
             ||||||||||||||||||||
Sbjct: 89938 ttttcaagacgagcaaactg 89957
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>gb|AY551002.1| Meleagris gallopavo glypican-1 precursor mRNA, complete cds
          Length = 1792

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 107  caagaaaacaaagattcaat 126
            ||||||||||||||||||||
Sbjct: 1005 caagaaaacaaagattcaat 1024
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>emb|AJ235843.1|CPU235843 Cinchona pubescens chloroplast ndhF gene
          Length = 2142

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 300  tctactcataaaagccagaa 319
            ||||||||||||||||||||
Sbjct: 1054 tctactcataaaagccagaa 1073
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>gb|AC004985.2| Homo sapiens PAC clone RP5-1165K10 from 7, complete sequence
          Length = 159507

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    aaaagccagaaaagaatctt 328
              ||||||||||||||||||||
Sbjct: 109360 aaaagccagaaaagaatctt 109341
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>gb|AC133435.2| Homo sapiens 3 BAC RP11-343B5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 116556

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   tatcagaaatctggcccact 235
             ||||||||||||||||||||
Sbjct: 33946 tatcagaaatctggcccact 33965
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>dbj|AP000375.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MJG19
          Length = 62948

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   tctcttccaactttgcaaag 423
             ||||||||||||||||||||
Sbjct: 16190 tctcttccaactttgcaaag 16209


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,378,889
Number of Sequences: 3902068
Number of extensions: 5378889
Number of successful extensions: 98827
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98668
Number of HSP's gapped (non-prelim): 149
length of query: 657
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 634
effective length of database: 17,143,297,704
effective search space: 10868850744336
effective search space used: 10868850744336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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