ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags21g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464558.1| Oryza sativa (japonica cultivar-group), mRNA 391 e-105
2ref|XM_506756.1| PREDICTED Oryza sativa (japonica cultivar-group... 391 e-105
3dbj|AK073514.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
4dbj|AK060003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
5gb|AY109347.1| Zea mays CL10949_1 mRNA sequence 325 1e-85
6ref|XM_466026.1| Oryza sativa (japonica cultivar-group), mRNA 151 4e-33
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
8dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
9dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
10dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
11gb|BT014281.1| Lycopersicon esculentum clone 133514F, mRNA sequence 54 6e-04
12gb|AY105955.1| Zea mays PCO121693 mRNA sequence 48 0.038
13gb|AF288225.1| Salmonella typhimurium resistance against oxidati... 46 0.15
14gb|AE008722.1| Salmonella typhimurium LT2, section 30 of 220 of ... 46 0.15
15emb|X17250.1|STNITRD Salmonella typhimurium gene for nitroreductase 46 0.15
16emb|AL627267.1| Salmonella enterica serovar Typhi (Salmonella ty... 46 0.15
17gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 46 0.15
18gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 46 0.15
19ref|XM_448461.1| Candida glabrata CBS138, CAGL0K05423g partial mRNA 44 0.59
20emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 44 0.59
21ref|XM_426249.1| PREDICTED: Gallus gallus similar to cysteinyl l... 42 2.3
22gb|AC010996.9| Homo sapiens chromosome 10 clone RP11-118J22, com... 42 2.3
23gb|AC151955.2| Populus trichocarpa clone Pop1-041G20, complete s... 40 9.3
24gb|AC154194.2| Mus musculus BAC clone RP24-401L2 from chromosome... 40 9.3
25gb|AE013104.1| Thermoanaerobacter tengcongensis MB4, section 131... 40 9.3
26ref|XM_949611.1| Theileria annulata strain Ankara hypothetical p... 40 9.3
27emb|AL607144.5| Human DNA sequence from clone RP11-398A16 on chr... 40 9.3
28emb|AL160255.14| Human DNA sequence from clone RP11-60N6 on chro... 40 9.3
29emb|AL096851.1|SPBC1105 S.pombe chromosome II cosmid c1105 40 9.3
30emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4... 40 9.3
31ref|NM_001022376.1| Schizosaccharomyces pombe 972h- hypothetical... 40 9.3
32gb|AC158772.5| Mus musculus chromosome 18, clone RP23-291M14, co... 40 9.3
33emb|CR962132.2| Medicago truncatula chromosome 5 clone mte1-33l1... 40 9.3
34gb|AC115692.6| Mus musculus chromosome 18, clone RP23-463G11, co... 40 9.3
35gb|AC152934.2| Xenopus tropicalis clone ISB1-84B23, complete seq... 40 9.3
36gb|AC004465.1|AC004465 Homo sapiens 12q24 PAC RPCI3-363I18 (Rosw... 40 9.3
37gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, comple... 40 9.3 
>ref|XM_464558.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 987

 Score =  391 bits (197), Expect = e-105
 Identities = 329/373 (88%)
 Strand = Plus / Plus

                                                                       
Query: 61  cgcatcaagttcaagaggcctgacaagactgccaggcacattatgaatatcttgaacaaa 120
           ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 431 cgcatcaagtttaagaggcctgacaagacggccaggcacattatgaatatcttgaacaag 490

                                                                       
Query: 121 gaggcggttgataaggtccactcggagagggagattcctgatgtgcagcctggatgcatc 180
           ||||| ||||| |||||||    ||| || |||||||||||||||||||||||||| || 
Sbjct: 491 gaggctgttgacaaggtccgtggggaaagagagattcctgatgtgcagcctggatgtatt 550

                                                                       
Query: 181 attcagatgagattgcaagttcctgagaacaaaaggcgagagtctacactaaaagggatt 240
           || || ||||||||||||||||||||||||||  | || ||||||||  | ||||| |||
Sbjct: 551 atccaaatgagattgcaagttcctgagaacaagcgtcgtgagtctacgttgaaaggcatt 610

                                                                       
Query: 241 gtgatagcaaggcgcaatgctgggataaatacaaccttcagattgcggagattagtagct 300
           || |||| ||| || ||||||||||| |||||||| |||||| |||| ||||||||||||
Sbjct: 611 gtcataggaagacgtaatgctgggatcaatacaactttcagactgcgtagattagtagct 670

                                                                       
Query: 301 ggtgtgggtgtcgaatctgtctttccactttactcgccaaacatcaaagaaatgaagatc 360
           ||||| || ||||| |||||||||||||||||||| ||||||||||| ||||| ||| ||
Sbjct: 671 ggtgttggagtcgagtctgtctttccactttactctccaaacatcaaggaaatcaaggtc 730

                                                                       
Query: 361 ttggacaggaagaaagtgaggagagctaagctgtattacctgagagacaggatgaatgca 420
           ||||||||||||||||| |||||||| ||| ||||||||||| | |||||||||||||||
Sbjct: 731 ttggacaggaagaaagtcaggagagcaaagttgtattacctgcgggacaggatgaatgca 790

                        
Query: 421 cttaaaaaatgag 433
           ||||| |||||||
Sbjct: 791 cttaagaaatgag 803
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>ref|XM_506756.1| PREDICTED Oryza sativa (japonica cultivar-group), P0544H11.34 mRNA
          Length = 1129

 Score =  391 bits (197), Expect = e-105
 Identities = 329/373 (88%)
 Strand = Plus / Plus

                                                                       
Query: 61  cgcatcaagttcaagaggcctgacaagactgccaggcacattatgaatatcttgaacaaa 120
           ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 436 cgcatcaagtttaagaggcctgacaagacggccaggcacattatgaatatcttgaacaag 495

                                                                       
Query: 121 gaggcggttgataaggtccactcggagagggagattcctgatgtgcagcctggatgcatc 180
           ||||| ||||| |||||||    ||| || |||||||||||||||||||||||||| || 
Sbjct: 496 gaggctgttgacaaggtccgtggggaaagagagattcctgatgtgcagcctggatgtatt 555

                                                                       
Query: 181 attcagatgagattgcaagttcctgagaacaaaaggcgagagtctacactaaaagggatt 240
           || || ||||||||||||||||||||||||||  | || ||||||||  | ||||| |||
Sbjct: 556 atccaaatgagattgcaagttcctgagaacaagcgtcgtgagtctacgttgaaaggcatt 615

                                                                       
Query: 241 gtgatagcaaggcgcaatgctgggataaatacaaccttcagattgcggagattagtagct 300
           || |||| ||| || ||||||||||| |||||||| |||||| |||| ||||||||||||
Sbjct: 616 gtcataggaagacgtaatgctgggatcaatacaactttcagactgcgtagattagtagct 675

                                                                       
Query: 301 ggtgtgggtgtcgaatctgtctttccactttactcgccaaacatcaaagaaatgaagatc 360
           ||||| || ||||| |||||||||||||||||||| ||||||||||| ||||| ||| ||
Sbjct: 676 ggtgttggagtcgagtctgtctttccactttactctccaaacatcaaggaaatcaaggtc 735

                                                                       
Query: 361 ttggacaggaagaaagtgaggagagctaagctgtattacctgagagacaggatgaatgca 420
           ||||||||||||||||| |||||||| ||| ||||||||||| | |||||||||||||||
Sbjct: 736 ttggacaggaagaaagtcaggagagcaaagttgtattacctgcgggacaggatgaatgca 795

                        
Query: 421 cttaaaaaatgag 433
           ||||| |||||||
Sbjct: 796 cttaagaaatgag 808
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>dbj|AK073514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040E14, full
           insert sequence
          Length = 1129

 Score =  391 bits (197), Expect = e-105
 Identities = 329/373 (88%)
 Strand = Plus / Plus

                                                                       
Query: 61  cgcatcaagttcaagaggcctgacaagactgccaggcacattatgaatatcttgaacaaa 120
           ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 436 cgcatcaagtttaagaggcctgacaagacggccaggcacattatgaatatcttgaacaag 495

                                                                       
Query: 121 gaggcggttgataaggtccactcggagagggagattcctgatgtgcagcctggatgcatc 180
           ||||| ||||| |||||||    ||| || |||||||||||||||||||||||||| || 
Sbjct: 496 gaggctgttgacaaggtccgtggggaaagagagattcctgatgtgcagcctggatgtatt 555

                                                                       
Query: 181 attcagatgagattgcaagttcctgagaacaaaaggcgagagtctacactaaaagggatt 240
           || || ||||||||||||||||||||||||||  | || ||||||||  | ||||| |||
Sbjct: 556 atccaaatgagattgcaagttcctgagaacaagcgtcgtgagtctacgttgaaaggcatt 615

                                                                       
Query: 241 gtgatagcaaggcgcaatgctgggataaatacaaccttcagattgcggagattagtagct 300
           || |||| ||| || ||||||||||| |||||||| |||||| |||| ||||||||||||
Sbjct: 616 gtcataggaagacgtaatgctgggatcaatacaactttcagactgcgtagattagtagct 675

                                                                       
Query: 301 ggtgtgggtgtcgaatctgtctttccactttactcgccaaacatcaaagaaatgaagatc 360
           ||||| || ||||| |||||||||||||||||||| ||||||||||| ||||| ||| ||
Sbjct: 676 ggtgttggagtcgagtctgtctttccactttactctccaaacatcaaggaaatcaaggtc 735

                                                                       
Query: 361 ttggacaggaagaaagtgaggagagctaagctgtattacctgagagacaggatgaatgca 420
           ||||||||||||||||| |||||||| ||| ||||||||||| | |||||||||||||||
Sbjct: 736 ttggacaggaagaaagtcaggagagcaaagttgtattacctgcgggacaggatgaatgca 795

                        
Query: 421 cttaaaaaatgag 433
           ||||| |||||||
Sbjct: 796 cttaagaaatgag 808
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>dbj|AK060003.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-A07, full
           insert sequence
          Length = 986

 Score =  391 bits (197), Expect = e-105
 Identities = 329/373 (88%)
 Strand = Plus / Plus

                                                                       
Query: 61  cgcatcaagttcaagaggcctgacaagactgccaggcacattatgaatatcttgaacaaa 120
           ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 431 cgcatcaagtttaagaggcctgacaagacggccaggcacattatgaatatcttgaacaag 490

                                                                       
Query: 121 gaggcggttgataaggtccactcggagagggagattcctgatgtgcagcctggatgcatc 180
           ||||| ||||| |||||||    ||| || |||||||||||||||||||||||||| || 
Sbjct: 491 gaggctgttgacaaggtccgtggggaaagagagattcctgatgtgcagcctggatgtatt 550

                                                                       
Query: 181 attcagatgagattgcaagttcctgagaacaaaaggcgagagtctacactaaaagggatt 240
           || || ||||||||||||||||||||||||||  | || ||||||||  | ||||| |||
Sbjct: 551 atccaaatgagattgcaagttcctgagaacaagcgtcgtgagtctacgttgaaaggcatt 610

                                                                       
Query: 241 gtgatagcaaggcgcaatgctgggataaatacaaccttcagattgcggagattagtagct 300
           || |||| ||| || ||||||||||| |||||||| |||||| |||| ||||||||||||
Sbjct: 611 gtcataggaagacgtaatgctgggatcaatacaactttcagactgcgtagattagtagct 670

                                                                       
Query: 301 ggtgtgggtgtcgaatctgtctttccactttactcgccaaacatcaaagaaatgaagatc 360
           ||||| || ||||| |||||||||||||||||||| ||||||||||| ||||| ||| ||
Sbjct: 671 ggtgttggagtcgagtctgtctttccactttactctccaaacatcaaggaaatcaaggtc 730

                                                                       
Query: 361 ttggacaggaagaaagtgaggagagctaagctgtattacctgagagacaggatgaatgca 420
           ||||||||||||||||| |||||||| ||| ||||||||||| | |||||||||||||||
Sbjct: 731 ttggacaggaagaaagtcaggagagcaaagttgtattacctgcgggacaggatgaatgca 790

                        
Query: 421 cttaaaaaatgag 433
           ||||| |||||||
Sbjct: 791 cttaagaaatgag 803
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>gb|AY109347.1| Zea mays CL10949_1 mRNA sequence
          Length = 1525

 Score =  325 bits (164), Expect = 1e-85
 Identities = 236/262 (90%)
 Strand = Plus / Minus

                                                                        
Query: 26   acgattccagctcccctgcggttgagcaccccccacgcatcaagttcaagaggcctgaca 85
            ||||||||| ||||||||||||||||||       |||||||||||||||||||| ||||
Sbjct: 1154 acgattccacctcccctgcggttgagcannnnnngcgcatcaagttcaagaggcccgaca 1095

                                                                        
Query: 86   agactgccaggcacattatgaatatcttgaacaaagaggcggttgataaggtccactcgg 145
            |||| ||||||||||||||||||||| | |||||||||||||| || ||||||| |||||
Sbjct: 1094 agaccgccaggcacattatgaatatcctaaacaaagaggcggtcgaaaaggtccgctcgg 1035

                                                                        
Query: 146  agagggagattcctgatgtgcagcctggatgcatcattcagatgagattgcaagttcctg 205
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 aaagggagattcctgatgtgcagcctggatgcatcattcagatgagattgcaagttcctg 975

                                                                        
Query: 206  agaacaaaaggcgagagtctacactaaaagggattgtgatagcaaggcgcaatgctggga 265
            |||||||| |||| ||||| || || || ||||||||||||| ||||||||| || ||||
Sbjct: 974  agaacaaacggcgtgagtcgacgctgaaggggattgtgataggaaggcgcaacgccggga 915

                                  
Query: 266  taaatacaaccttcagattgcg 287
            | ||||||||||||||||||||
Sbjct: 914  tcaatacaaccttcagattgcg 893



 Score =  178 bits (90), Expect = 2e-41
 Identities = 111/118 (94%)
 Strand = Plus / Minus

                                                                       
Query: 316 tctgtctttccactttactcgccaaacatcaaagaaatgaagatcttggacaggaagaaa 375
           |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||
Sbjct: 864 tctgtctttccactttactcgccaaacatcaaagaaatcaaggtattggacaggaagaaa 805

                                                                     
Query: 376 gtgaggagagctaagctgtattacctgagagacaggatgaatgcacttaaaaaatgag 433
           || |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||
Sbjct: 804 gtcaggagagctaagctgtattacctgagggacaggatgaacgcacttagaaaatgag 747
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>ref|XM_466026.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 636

 Score =  151 bits (76), Expect = 4e-33
 Identities = 142/164 (86%)
 Strand = Plus / Plus

                                                                       
Query: 151 gagattcctgatgtgcagcctggatgcatcattcagatgagattgcaagttcctgagaac 210
           |||||||||||||||||||||||||| ||  | || |||||| |||||||||||||||| 
Sbjct: 370 gagattcctgatgtgcagcctggatgtattctccaaatgagactgcaagttcctgagaag 429

                                                                       
Query: 211 aaaaggcgagagtctacactaaaagggattgtgatagcaaggcgcaatgctgggataaat 270
           ||  |||| ||||||||  | ||||| ||||| |||||||| |||||||||||||| |||
Sbjct: 430 aagcggcgcgagtctacgttgaaaggcattgtcatagcaagacgcaatgctgggatcaat 489

                                                       
Query: 271 acaaccttcagattgcggagattagtagctggtgtgggtgtcga 314
           ||||| |||||| |||| ||||||||||||||||| || |||||
Sbjct: 490 acaactttcagactgcgtagattagtagctggtgttggagtcga 533



 Score =  133 bits (67), Expect = 8e-28
 Identities = 94/103 (91%)
 Strand = Plus / Plus

                                                                       
Query: 330 ttactcgccaaacatcaaagaaatgaagatcttggacaggaagaaagtgaggagagctaa 389
           |||||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||
Sbjct: 534 ttactctccaaacatcaaagaaatcaaggtcttggacaggaagaaagtcaggagagcaaa 593

                                                      
Query: 390 gctgtattacctgagagacaggatgaatgcacttaaaaaatga 432
           | ||||||||||| | |||||||||||||||||||| ||||||
Sbjct: 594 gttgtattacctgcgggacaggatgaatgcacttaagaaatga 636
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  135 bits (68), Expect = 2e-28
 Identities = 95/104 (91%)
 Strand = Plus / Plus

                                                                            
Query: 330      ttactcgccaaacatcaaagaaatgaagatcttggacaggaagaaagtgaggagagctaa 389
                |||||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||
Sbjct: 19180204 ttactctccaaacatcaaagaaatcaaggtcttggacaggaagaaagtcaggagagcaaa 19180263

                                                            
Query: 390      gctgtattacctgagagacaggatgaatgcacttaaaaaatgag 433
                | ||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 19180264 gttgtattacctgcgggacaggatgaatgcacttaagaaatgag 19180307



 Score =  133 bits (67), Expect = 8e-28
 Identities = 118/135 (87%)
 Strand = Plus / Plus

                                                                            
Query: 195      gcaagttcctgagaacaaaaggcgagagtctacactaaaagggattgtgatagcaaggcg 254
                ||||||||||||||| ||  |||| ||||||||  | ||||| ||||| |||||||| ||
Sbjct: 19179160 gcaagttcctgagaagaagcggcgcgagtctacgttgaaaggcattgtcatagcaagacg 19179219

                                                                            
Query: 255      caatgctgggataaatacaaccttcagattgcggagattagtagctggtgtgggtgtcga 314
                |||||||||||| |||||||| |||||| |||| ||||||||||||||||| || |||||
Sbjct: 19179220 caatgctgggatcaatacaactttcagactgcgtagattagtagctggtgttggagtcga 19179279

                               
Query: 315      atctgtctttccact 329
                 ||||||||||||||
Sbjct: 19179280 gtctgtctttccact 19179294



 Score =  127 bits (64), Expect = 5e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                            
Query: 330      ttactcgccaaacatcaaagaaatgaagatcttggacaggaagaaagtgaggagagctaa 389
                |||||| ||||||||||||||||| ||  ||||||||||||||||||| |||||||| ||
Sbjct: 19180815 ttactctccaaacatcaaagaaatcaaagtcttggacaggaagaaagtcaggagagcaaa 19180874

                                                            
Query: 390      gctgtattacctgagagacaggatgaatgcacttaaaaaatgag 433
                | ||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 19180875 gttgtattacctgcgggacaggatgaatgcacttaagaaatgag 19180918



 Score =  127 bits (64), Expect = 5e-26
 Identities = 94/104 (90%)
 Strand = Plus / Minus

                                                                           
Query: 330     ttactcgccaaacatcaaagaaatgaagatcttggacaggaagaaagtgaggagagctaa 389
               |||||| ||||||||||| ||||| ||| ||||||||||||||||||| |||||||| ||
Sbjct: 5907457 ttactctccaaacatcaaggaaatcaaggtcttggacaggaagaaagtcaggagagcaaa 5907398

                                                           
Query: 390     gctgtattacctgagagacaggatgaatgcacttaaaaaatgag 433
               | ||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 5907397 gttgtattacctgcgggacaggatgaatgcacttaagaaatgag 5907354



 Score =  117 bits (59), Expect = 5e-23
 Identities = 116/135 (85%)
 Strand = Plus / Minus

                                                                           
Query: 195     gcaagttcctgagaacaaaaggcgagagtctacactaaaagggattgtgatagcaaggcg 254
               ||||||||||||||||||  | || ||||||||  | ||||| ||||| |||| ||| ||
Sbjct: 5908462 gcaagttcctgagaacaagcgtcgtgagtctacgttgaaaggcattgtcataggaagacg 5908403

                                                                           
Query: 255     caatgctgggataaatacaaccttcagattgcggagattagtagctggtgtgggtgtcga 314
                ||||||||||| |||||||| |||||| |||| ||||||||||||||||| || |||||
Sbjct: 5908402 taatgctgggatcaatacaactttcagactgcgtagattagtagctggtgttggagtcga 5908343

                              
Query: 315     atctgtctttccact 329
                ||||||||||||||
Sbjct: 5908342 gtctgtctttccact 5908328



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                               
Query: 61      cgcatcaagttcaagaggcctgacaagactgccaggcacattatgaat 108
               ||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 5908780 cgcatcaagtttaagaggcctgacaagacggccaggcacattatgaat 5908733



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                           
Query: 109     atcttgaacaaagaggcggttgataaggtccactcggagagggagattcctgatgtgcag 168
               ||||||||||| ||||| ||||| |||||||    ||| || ||||||||||||||||||
Sbjct: 5908628 atcttgaacaaggaggctgttgacaaggtccgtggggaaagagagattcctgatgtgcag 5908569

                                          
Query: 169     cctggatgcatcattcagatgagattg 195
               |||||||| || || || |||||||||
Sbjct: 5908568 cctggatgtattatccaaatgagattg 5908542



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 151      gagattcctgatgtgcagcctggatg 176
                ||||||||||||||||||||||||||
Sbjct: 19179034 gagattcctgatgtgcagcctggatg 19179059
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>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0415B12
          Length = 157419

 Score =  135 bits (68), Expect = 2e-28
 Identities = 95/104 (91%)
 Strand = Plus / Plus

                                                                         
Query: 330   ttactcgccaaacatcaaagaaatgaagatcttggacaggaagaaagtgaggagagctaa 389
             |||||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||
Sbjct: 78453 ttactctccaaacatcaaagaaatcaaggtcttggacaggaagaaagtcaggagagcaaa 78512

                                                         
Query: 390   gctgtattacctgagagacaggatgaatgcacttaaaaaatgag 433
             | ||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 78513 gttgtattacctgcgggacaggatgaatgcacttaagaaatgag 78556



 Score =  133 bits (67), Expect = 8e-28
 Identities = 118/135 (87%)
 Strand = Plus / Plus

                                                                         
Query: 195   gcaagttcctgagaacaaaaggcgagagtctacactaaaagggattgtgatagcaaggcg 254
             ||||||||||||||| ||  |||| ||||||||  | ||||| ||||| |||||||| ||
Sbjct: 77409 gcaagttcctgagaagaagcggcgcgagtctacgttgaaaggcattgtcatagcaagacg 77468

                                                                         
Query: 255   caatgctgggataaatacaaccttcagattgcggagattagtagctggtgtgggtgtcga 314
             |||||||||||| |||||||| |||||| |||| ||||||||||||||||| || |||||
Sbjct: 77469 caatgctgggatcaatacaactttcagactgcgtagattagtagctggtgttggagtcga 77528

                            
Query: 315   atctgtctttccact 329
              ||||||||||||||
Sbjct: 77529 gtctgtctttccact 77543



 Score =  127 bits (64), Expect = 5e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                         
Query: 330   ttactcgccaaacatcaaagaaatgaagatcttggacaggaagaaagtgaggagagctaa 389
             |||||| ||||||||||||||||| ||  ||||||||||||||||||| |||||||| ||
Sbjct: 79064 ttactctccaaacatcaaagaaatcaaagtcttggacaggaagaaagtcaggagagcaaa 79123

                                                         
Query: 390   gctgtattacctgagagacaggatgaatgcacttaaaaaatgag 433
             | ||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 79124 gttgtattacctgcgggacaggatgaatgcacttaagaaatgag 79167



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 151   gagattcctgatgtgcagcctggatg 176
             ||||||||||||||||||||||||||
Sbjct: 77283 gagattcctgatgtgcagcctggatg 77308
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>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0056C19
          Length = 147739

 Score =  127 bits (64), Expect = 5e-26
 Identities = 94/104 (90%)
 Strand = Plus / Minus

                                                                         
Query: 330   ttactcgccaaacatcaaagaaatgaagatcttggacaggaagaaagtgaggagagctaa 389
             |||||| ||||||||||| ||||| ||| ||||||||||||||||||| |||||||| ||
Sbjct: 85678 ttactctccaaacatcaaggaaatcaaggtcttggacaggaagaaagtcaggagagcaaa 85619

                                                         
Query: 390   gctgtattacctgagagacaggatgaatgcacttaaaaaatgag 433
             | ||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 85618 gttgtattacctgcgggacaggatgaatgcacttaagaaatgag 85575



 Score =  117 bits (59), Expect = 5e-23
 Identities = 116/135 (85%)
 Strand = Plus / Minus

                                                                         
Query: 195   gcaagttcctgagaacaaaaggcgagagtctacactaaaagggattgtgatagcaaggcg 254
             ||||||||||||||||||  | || ||||||||  | ||||| ||||| |||| ||| ||
Sbjct: 86683 gcaagttcctgagaacaagcgtcgtgagtctacgttgaaaggcattgtcataggaagacg 86624

                                                                         
Query: 255   caatgctgggataaatacaaccttcagattgcggagattagtagctggtgtgggtgtcga 314
              ||||||||||| |||||||| |||||| |||| ||||||||||||||||| || |||||
Sbjct: 86623 taatgctgggatcaatacaactttcagactgcgtagattagtagctggtgttggagtcga 86564

                            
Query: 315   atctgtctttccact 329
              ||||||||||||||
Sbjct: 86563 gtctgtctttccact 86549



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                             
Query: 61    cgcatcaagttcaagaggcctgacaagactgccaggcacattatgaat 108
             ||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 87001 cgcatcaagtttaagaggcctgacaagacggccaggcacattatgaat 86954



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                         
Query: 109   atcttgaacaaagaggcggttgataaggtccactcggagagggagattcctgatgtgcag 168
             ||||||||||| ||||| ||||| |||||||    ||| || ||||||||||||||||||
Sbjct: 86849 atcttgaacaaggaggctgttgacaaggtccgtggggaaagagagattcctgatgtgcag 86790

                                        
Query: 169   cctggatgcatcattcagatgagattg 195
             |||||||| || || || |||||||||
Sbjct: 86789 cctggatgtattatccaaatgagattg 86763
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>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0544H11
          Length = 178376

 Score =  127 bits (64), Expect = 5e-26
 Identities = 94/104 (90%)
 Strand = Plus / Minus

                                                                          
Query: 330    ttactcgccaaacatcaaagaaatgaagatcttggacaggaagaaagtgaggagagctaa 389
              |||||| ||||||||||| ||||| ||| ||||||||||||||||||| |||||||| ||
Sbjct: 137259 ttactctccaaacatcaaggaaatcaaggtcttggacaggaagaaagtcaggagagcaaa 137200

                                                          
Query: 390    gctgtattacctgagagacaggatgaatgcacttaaaaaatgag 433
              | ||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 137199 gttgtattacctgcgggacaggatgaatgcacttaagaaatgag 137156



 Score =  117 bits (59), Expect = 5e-23
 Identities = 116/135 (85%)
 Strand = Plus / Minus

                                                                          
Query: 195    gcaagttcctgagaacaaaaggcgagagtctacactaaaagggattgtgatagcaaggcg 254
              ||||||||||||||||||  | || ||||||||  | ||||| ||||| |||| ||| ||
Sbjct: 138264 gcaagttcctgagaacaagcgtcgtgagtctacgttgaaaggcattgtcataggaagacg 138205

                                                                          
Query: 255    caatgctgggataaatacaaccttcagattgcggagattagtagctggtgtgggtgtcga 314
               ||||||||||| |||||||| |||||| |||| ||||||||||||||||| || |||||
Sbjct: 138204 taatgctgggatcaatacaactttcagactgcgtagattagtagctggtgttggagtcga 138145

                             
Query: 315    atctgtctttccact 329
               ||||||||||||||
Sbjct: 138144 gtctgtctttccact 138130



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                              
Query: 61     cgcatcaagttcaagaggcctgacaagactgccaggcacattatgaat 108
              ||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 138582 cgcatcaagtttaagaggcctgacaagacggccaggcacattatgaat 138535



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                          
Query: 109    atcttgaacaaagaggcggttgataaggtccactcggagagggagattcctgatgtgcag 168
              ||||||||||| ||||| ||||| |||||||    ||| || ||||||||||||||||||
Sbjct: 138430 atcttgaacaaggaggctgttgacaaggtccgtggggaaagagagattcctgatgtgcag 138371

                                         
Query: 169    cctggatgcatcattcagatgagattg 195
              |||||||| || || || |||||||||
Sbjct: 138370 cctggatgtattatccaaatgagattg 138344
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>gb|BT014281.1| Lycopersicon esculentum clone 133514F, mRNA sequence
          Length = 1317

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 232 aaagggattgtgatagcaaggcgcaatgctgggataaatacaaccttcaga 282
           ||||| || |||||||||||||||||||||||  ||||||| || ||||||
Sbjct: 692 aaaggcatagtgatagcaaggcgcaatgctggtttaaatactacattcaga 742
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>gb|AY105955.1| Zea mays PCO121693 mRNA sequence
          Length = 1004

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 370 aagaaagtgaggagagctaagctgtattacctgagagaca 409
           ||||||||||||||||| ||| |||| ||||||| |||||
Sbjct: 749 aagaaagtgaggagagcaaagttgtactacctgaaagaca 788
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>gb|AF288225.1| Salmonella typhimurium resistance against oxidative stress protein
           A (rox-A) gene, complete cds
          Length = 1724

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 240 tgtgatagcaaggcgcaatgctgggataaat 270
           ||||||||| ||||||||||||||| |||||
Sbjct: 299 tgtgatagccaggcgcaatgctggggtaaat 329
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>gb|AE008722.1| Salmonella typhimurium LT2, section 30 of 220 of the complete genome
          Length = 20029

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 240   tgtgatagcaaggcgcaatgctgggataaat 270
             ||||||||| ||||||||||||||| |||||
Sbjct: 18975 tgtgatagccaggcgcaatgctggggtaaat 19005
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>emb|X17250.1|STNITRD Salmonella typhimurium gene for nitroreductase
          Length = 1690

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 240 tgtgatagcaaggcgcaatgctgggataaat 270
           ||||||||| ||||||||||||||| |||||
Sbjct: 62  tgtgatagccaggcgcaatgctggggtaaat 32
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>emb|AL627267.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 3/20
          Length = 240050

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 240    tgtgatagcaaggcgcaatgctgggataaat 270
              ||||||||| ||||||||||||||| |||||
Sbjct: 103036 tgtgatagccaggcgcaatgctggggtaaat 103066
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 240     tgtgatagcaaggcgcaatgctgggataaat 270
               ||||||||| ||||||||||||||| |||||
Sbjct: 2359065 tgtgatagccaggcgcaatgctggggtaaat 2359035
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
              complete genome
          Length = 4755700

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 240    tgtgatagcaaggcgcaatgctgggataaat 270
              ||||||||| ||||||||||||||| |||||
Sbjct: 680471 tgtgatagccaggcgcaatgctggggtaaat 680501
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>ref|XM_448461.1| Candida glabrata CBS138, CAGL0K05423g partial mRNA
          Length = 1230

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 330  ttactcgccaaacatcaaagaa 351
            ||||||||||||||||||||||
Sbjct: 1102 ttactcgccaaacatcaaagaa 1123
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>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 330    ttactcgccaaacatcaaagaa 351
              ||||||||||||||||||||||
Sbjct: 532863 ttactcgccaaacatcaaagaa 532884
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>ref|XM_426249.1| PREDICTED: Gallus gallus similar to cysteinyl leukotriene receptor 1
            (LOC428691), mRNA
          Length = 2643

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 160  gatgtgcagcctggatgcatc 180
            |||||||||||||||||||||
Sbjct: 1524 gatgtgcagcctggatgcatc 1544
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>gb|AC010996.9| Homo sapiens chromosome 10 clone RP11-118J22, complete sequence
          Length = 169512

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 341   acatcaaagaaatgaagatct 361
             |||||||||||||||||||||
Sbjct: 28070 acatcaaagaaatgaagatct 28090
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>gb|AC151955.2| Populus trichocarpa clone Pop1-041G20, complete sequence
          Length = 129953

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   aacatcaaagaaatgaagat 359
             ||||||||||||||||||||
Sbjct: 48793 aacatcaaagaaatgaagat 48812
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>gb|AC154194.2| Mus musculus BAC clone RP24-401L2 from chromosome 17, complete sequence
          Length = 196871

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     agaggcctgacaagactgcc 93
              ||||||||||||||||||||
Sbjct: 141928 agaggcctgacaagactgcc 141947
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>gb|AE013104.1| Thermoanaerobacter tengcongensis MB4, section 131 of 244 of the
            complete genome
          Length = 14571

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 373  aaagtgaggagagctaagctgtattacctgag 404
            ||||| |||||||| ||||| |||||||||||
Sbjct: 5569 aaagttaggagagcaaagctttattacctgag 5538
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>ref|XM_949611.1| Theileria annulata strain Ankara hypothetical protein (TA18860)
            partial mRNA
          Length = 2625

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 121  gaggcggttgataaggtcca 140
            ||||||||||||||||||||
Sbjct: 1060 gaggcggttgataaggtcca 1041
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>emb|AL607144.5| Human DNA sequence from clone RP11-398A16 on chromosome 13 Contains
             part of a novel gene (KIAA0774) and a CpG island, complete
             sequence
          Length = 93294

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   aaagaaatgaagatcttgga 365
             ||||||||||||||||||||
Sbjct: 12091 aaagaaatgaagatcttgga 12072
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>emb|AL160255.14| Human DNA sequence from clone RP11-60N6 on chromosome 13 Contains the
             5' end of a novel gene (KIAA0774), complete sequence
          Length = 172923

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   aaagaaatgaagatcttgga 365
             ||||||||||||||||||||
Sbjct: 29360 aaagaaatgaagatcttgga 29341
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>emb|AL096851.1|SPBC1105 S.pombe chromosome II cosmid c1105
          Length = 34982

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 448 gtttctacgatttttgctct 467
           ||||||||||||||||||||
Sbjct: 389 gtttctacgatttttgctct 408
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>emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4, COMPLETE SEQUENCE
          Length = 114414

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 330  ttactcgccaaacatcaaagaaat 353
            |||||| |||||||||||||||||
Sbjct: 6526 ttactcaccaaacatcaaagaaat 6549
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>ref|NM_001022376.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC1105.01),
           partial mRNA
          Length = 970

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 448 gtttctacgatttttgctct 467
           ||||||||||||||||||||
Sbjct: 392 gtttctacgatttttgctct 411
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>gb|AC158772.5| Mus musculus chromosome 18, clone RP23-291M14, complete sequence
          Length = 198851

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   aaacatcaaagaaatgaaga 358
             ||||||||||||||||||||
Sbjct: 80237 aaacatcaaagaaatgaaga 80256
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>emb|CR962132.2| Medicago truncatula chromosome 5 clone mte1-33l16, COMPLETE SEQUENCE
          Length = 47783

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 330   ttactcgccaaacatcaaagaaat 353
             |||||| |||||||||||||||||
Sbjct: 32958 ttactcaccaaacatcaaagaaat 32981
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>gb|AC115692.6| Mus musculus chromosome 18, clone RP23-463G11, complete sequence
          Length = 227631

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    aaacatcaaagaaatgaaga 358
              ||||||||||||||||||||
Sbjct: 216932 aaacatcaaagaaatgaaga 216913
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>gb|AC152934.2| Xenopus tropicalis clone ISB1-84B23, complete sequence
          Length = 87331

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 88    actgccaggcacattatgaatatc 111
             ||||||||||||||||| ||||||
Sbjct: 33060 actgccaggcacattataaatatc 33083
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>gb|AC004465.1|AC004465 Homo sapiens 12q24 PAC RPCI3-363I18 (Roswell Park Cancer Institute
             Human PAC library) complete sequence
          Length = 102750

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   gaatctgtctttccacttta 332
             ||||||||||||||||||||
Sbjct: 23269 gaatctgtctttccacttta 23250
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>gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, complete sequence
          Length = 170607

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    tgtgcagcctggatgcatcattca 185
              ||||||||||| ||||||||||||
Sbjct: 120853 tgtgcagcctgtatgcatcattca 120876


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,133,527
Number of Sequences: 3902068
Number of extensions: 6133527
Number of successful extensions: 103869
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103693
Number of HSP's gapped (non-prelim): 168
length of query: 677
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 654
effective length of database: 17,143,297,704
effective search space: 11211716698416
effective search space used: 11211716698416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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