ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags21f08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009484.1| Triticum aestivum clone wr1.pk0046.b11:fis, full insert mRNA sequence Length = 1658 Score = 938 bits (473), Expect = 0.0 Identities = 506/517 (97%) Strand = Plus / Plus Query: 1 agcttggactagatagctccattgtttcaggttttttggacgaattggagcaactgctca 60 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95 agcttggcctagatagctccattgtttcaggttttttggacgagttggagcaactgctca 154 Query: 61 agggtgttgctatgatgaaagagctgactcttaggacacgagattaccttgtttcgtttg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 155 agggtgttgctatgatgaaagagctgactcttaggacacgagattaccttgtttcctttg 214 Query: 121 gtgaatgcatgtctacaagaatattttctgcatatttaaataaagtcgggaagaaggcac 180 ||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| Sbjct: 215 gtgaatgcatgtctacaagaatattttctgcatatttgaataaactagggaagaaggcac 274 Query: 181 gacagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 gacagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgata 334 Query: 241 ttctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgacc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 ttctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgacc 394 Query: 301 ctgctattcctatagtgactggtttccttgggaagggatggaaatcatgtgcggtcacaa 360 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 395 ctgctattcctatagtgactggtttccttgggaagggatggaaatcttgtgcggtcacaa 454 Query: 361 cgttaggaaggggcggcagtgacttgactgctacaaccattggcaaagccttggggttaa 420 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 455 cgttaggaaggggcggcagtgacttgaccgctacaaccattggcaaagccttggggttaa 514 Query: 421 gagaaatccaggtttggaaggatgtagacggtgtgttaacgtgtgatccaaatatttatg 480 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 515 gagaaattcaggtttggaaggatgtagacggtgtgttgacgtgtgatccaaatatttatg 574 Query: 481 caaacgcagtaccagtaccctacttgacttttgatga 517 ||||||| ||||||||||||||||||||||||||||| Sbjct: 575 caaacgcggtaccagtaccctacttgacttttgatga 611
>ref|XM_470409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1698 Score = 543 bits (274), Expect = e-151 Identities = 454/514 (88%) Strand = Plus / Plus Query: 1 agcttggactagatagctccattgtttcaggttttttggacgaattggagcaactgctca 60 |||||||| | ||||| || |||||||||||||| ||||| |||||||| ||||| || | Sbjct: 479 agcttggattggatagatcgattgtttcaggtttattggaagaattggaacaacttctta 538 Query: 61 agggtgttgctatgatgaaagagctgactcttaggacacgagattaccttgtttcgtttg 120 |||||||||||||||||||||| || |||| ||||||||| |||||||||||||| || | Sbjct: 539 agggtgttgctatgatgaaagaactaactcctaggacacgggattaccttgtttccttcg 598 Query: 121 gtgaatgcatgtctacaagaatattttctgcatatttaaataaagtcgggaagaaggcac 180 |||||||||||||||||||||||||| |||||||||| |||||| | ||||| ||||| | Sbjct: 599 gtgaatgcatgtctacaagaatatttgctgcatatttgaataaacttgggaaaaaggctc 658 Query: 181 gacagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgata 240 | ||||||||||| |||||| ||||||||||||| ||||| |||||||||||||| || | Sbjct: 659 ggcagtatgatgcatttgatattggctttataactactgatgatttcacaaatgcggaca 718 Query: 241 ttctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgacc 300 |||| ||||| || ||||||||||||||||||||| |||| || ||||||||||| |||| Sbjct: 719 ttcttgaagcgacatatcctgctgttgcaaagaggttacagggtgattggattgacgacc 778 Query: 301 ctgctattcctatagtgactggtttccttgggaagggatggaaatcatgtgcggtcacaa 360 |||||||||||||||| |||||||||||||| || ||||||||||||||||| ||||| | Sbjct: 779 ctgctattcctatagttactggtttccttggaaaaggatggaaatcatgtgctgtcacca 838 Query: 361 cgttaggaaggggcggcagtgacttgactgctacaaccattggcaaagccttggggttaa 420 | ||||| || || ||||| |||||||||||||| |||||||||||||| ||||| |||| Sbjct: 839 ctttaggcagaggtggcagcgacttgactgctaccaccattggcaaagcgttgggattaa 898 Query: 421 gagaaatccaggtttggaaggatgtagacggtgtgttaacgtgtgatccaaatatttatg 480 |||| |||||||| ||||||||||| || |||||||| || |||||||| ||||||| || Sbjct: 899 gagagatccaggtatggaaggatgttgatggtgtgttgacatgtgatcctaatatttgtg 958 Query: 481 caaacgcagtaccagtaccctacttgacttttga 514 | ||||| |||| |||||||||||||||||||| Sbjct: 959 cgaacgcgatacctgtaccctacttgacttttga 992
>dbj|AK121930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106K22, full insert sequence Length = 1916 Score = 543 bits (274), Expect = e-151 Identities = 454/514 (88%) Strand = Plus / Plus Query: 1 agcttggactagatagctccattgtttcaggttttttggacgaattggagcaactgctca 60 |||||||| | ||||| || |||||||||||||| ||||| |||||||| ||||| || | Sbjct: 485 agcttggattggatagatcgattgtttcaggtttattggaagaattggaacaacttctta 544 Query: 61 agggtgttgctatgatgaaagagctgactcttaggacacgagattaccttgtttcgtttg 120 |||||||||||||||||||||| || |||| ||||||||| |||||||||||||| || | Sbjct: 545 agggtgttgctatgatgaaagaactaactcctaggacacgggattaccttgtttccttcg 604 Query: 121 gtgaatgcatgtctacaagaatattttctgcatatttaaataaagtcgggaagaaggcac 180 |||||||||||||||||||||||||| |||||||||| |||||| | ||||| ||||| | Sbjct: 605 gtgaatgcatgtctacaagaatatttgctgcatatttgaataaacttgggaaaaaggctc 664 Query: 181 gacagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgata 240 | ||||||||||| |||||| ||||||||||||| ||||| |||||||||||||| || | Sbjct: 665 ggcagtatgatgcatttgatattggctttataactactgatgatttcacaaatgcggaca 724 Query: 241 ttctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgacc 300 |||| ||||| || ||||||||||||||||||||| |||| || ||||||||||| |||| Sbjct: 725 ttcttgaagcgacatatcctgctgttgcaaagaggttacagggtgattggattgacgacc 784 Query: 301 ctgctattcctatagtgactggtttccttgggaagggatggaaatcatgtgcggtcacaa 360 |||||||||||||||| |||||||||||||| || ||||||||||||||||| ||||| | Sbjct: 785 ctgctattcctatagttactggtttccttggaaaaggatggaaatcatgtgctgtcacca 844 Query: 361 cgttaggaaggggcggcagtgacttgactgctacaaccattggcaaagccttggggttaa 420 | ||||| || || ||||| |||||||||||||| |||||||||||||| ||||| |||| Sbjct: 845 ctttaggcagaggtggcagcgacttgactgctaccaccattggcaaagcgttgggattaa 904 Query: 421 gagaaatccaggtttggaaggatgtagacggtgtgttaacgtgtgatccaaatatttatg 480 |||| |||||||| ||||||||||| || |||||||| || |||||||| ||||||| || Sbjct: 905 gagagatccaggtatggaaggatgttgatggtgtgttgacatgtgatcctaatatttgtg 964 Query: 481 caaacgcagtaccagtaccctacttgacttttga 514 | ||||| |||| |||||||||||||||||||| Sbjct: 965 cgaacgcgatacctgtaccctacttgacttttga 998
>ref|XM_477617.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1991 Score = 337 bits (170), Expect = 2e-89 Identities = 395/470 (84%) Strand = Plus / Plus Query: 48 gagcaactgctcaagggtgttgctatgatgaaagagctgactcttaggacacgagattac 107 |||||||| || ||||| ||||||||||||||||||| |||||||||||| |||| || Sbjct: 605 gagcaacttcttaagggaattgctatgatgaaagagcttactcttaggacaagagactat 664 Query: 108 cttgtttcgtttggtgaatgcatgtctacaagaatattttctgcatatttaaataaagtc 167 |||||||| || |||||||||||||| ||||| |||||| | ||| ||| |||||| | Sbjct: 665 cttgtttccttcggtgaatgcatgtcaacaaggatatttgcggcacttttgaataaactt 724 Query: 168 gggaagaaggcacgacagtatgatgcttttgatcttggctttataaccactgacgatttc 227 ||| ||| ||||| ||||||||||| ||||| | ||||||||||||||||| |||||| Sbjct: 725 ggggtgaaagcacgtcagtatgatgcatttgaaataggctttataaccactgatgatttc 784 Query: 228 acaaatgccgatattctcgaagcaacttatcctgctgttgcaaagaggctacatggagat 287 ||||| || |||||||| ||||||||||||||||| ||||||||||||||||||| || Sbjct: 785 acaaacgctgatattctggaagcaacttatcctgccattgcaaagaggctacatggggac 844 Query: 288 tggattgatgaccctgctattcctatagtgactggtttccttgggaagggatggaaatca 347 ||| || || ||||||||||| ||||| |||||||| || || |||||||||||| | Sbjct: 845 tgggttactggtcctgctattccaatagtcactggttttctcggaaagggatggaaaact 904 Query: 348 tgtgcggtcacaacgttaggaaggggcggcagtgacttgactgctacaaccattggcaaa 407 |||| |||| || ||||| ||||| || |||||| |||| ||||| |||||||||||| Sbjct: 905 ggtgcaatcaccactttaggcaggggtggtagtgacctgacagctactaccattggcaaa 964 Query: 408 gccttggggttaagagaaatccaggtttggaaggatgtagacggtgtgttaacgtgtgat 467 |||||||| ||||||||||||||||||||||| ||||| || ||||| ||||| |||||| Sbjct: 965 gccttgggattaagagaaatccaggtttggaaagatgttgatggtgttttaacttgtgat 1024 Query: 468 ccaaatatttatgcaaacgcagtaccagtaccctacttgacttttgatga 517 || |||||| || |||| || ||| || || |||||||| |||||||| Sbjct: 1025 cctaatattcatccaaatgcgaaacctgtgccatacttgacatttgatga 1074
>ref|XM_477616.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1982 Score = 337 bits (170), Expect = 2e-89 Identities = 395/470 (84%) Strand = Plus / Plus Query: 48 gagcaactgctcaagggtgttgctatgatgaaagagctgactcttaggacacgagattac 107 |||||||| || ||||| ||||||||||||||||||| |||||||||||| |||| || Sbjct: 610 gagcaacttcttaagggaattgctatgatgaaagagcttactcttaggacaagagactat 669 Query: 108 cttgtttcgtttggtgaatgcatgtctacaagaatattttctgcatatttaaataaagtc 167 |||||||| || |||||||||||||| ||||| |||||| | ||| ||| |||||| | Sbjct: 670 cttgtttccttcggtgaatgcatgtcaacaaggatatttgcggcacttttgaataaactt 729 Query: 168 gggaagaaggcacgacagtatgatgcttttgatcttggctttataaccactgacgatttc 227 ||| ||| ||||| ||||||||||| ||||| | ||||||||||||||||| |||||| Sbjct: 730 ggggtgaaagcacgtcagtatgatgcatttgaaataggctttataaccactgatgatttc 789 Query: 228 acaaatgccgatattctcgaagcaacttatcctgctgttgcaaagaggctacatggagat 287 ||||| || |||||||| ||||||||||||||||| ||||||||||||||||||| || Sbjct: 790 acaaacgctgatattctggaagcaacttatcctgccattgcaaagaggctacatggggac 849 Query: 288 tggattgatgaccctgctattcctatagtgactggtttccttgggaagggatggaaatca 347 ||| || || ||||||||||| ||||| |||||||| || || |||||||||||| | Sbjct: 850 tgggttactggtcctgctattccaatagtcactggttttctcggaaagggatggaaaact 909 Query: 348 tgtgcggtcacaacgttaggaaggggcggcagtgacttgactgctacaaccattggcaaa 407 |||| |||| || ||||| ||||| || |||||| |||| ||||| |||||||||||| Sbjct: 910 ggtgcaatcaccactttaggcaggggtggtagtgacctgacagctactaccattggcaaa 969 Query: 408 gccttggggttaagagaaatccaggtttggaaggatgtagacggtgtgttaacgtgtgat 467 |||||||| ||||||||||||||||||||||| ||||| || ||||| ||||| |||||| Sbjct: 970 gccttgggattaagagaaatccaggtttggaaagatgttgatggtgttttaacttgtgat 1029 Query: 468 ccaaatatttatgcaaacgcagtaccagtaccctacttgacttttgatga 517 || |||||| || |||| || ||| || || |||||||| |||||||| Sbjct: 1030 cctaatattcatccaaatgcgaaacctgtgccatacttgacatttgatga 1079
>dbj|AK061941.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D10, full insert sequence Length = 1991 Score = 329 bits (166), Expect = 5e-87 Identities = 394/470 (83%) Strand = Plus / Plus Query: 48 gagcaactgctcaagggtgttgctatgatgaaagagctgactcttaggacacgagattac 107 |||||||| || ||||| ||||||||||||||||||| |||||||||||| |||| || Sbjct: 605 gagcaacttcttaagggaattgctatgatgaaagagcttactcttaggacaagagactat 664 Query: 108 cttgtttcgtttggtgaatgcatgtctacaagaatattttctgcatatttaaataaagtc 167 |||||||| || |||||||||||||| ||||| |||||| | ||| ||| |||||| | Sbjct: 665 cttgtttccttcggtgaatgcatgtcaacaaggatatttgcggcacttttgaataaactt 724 Query: 168 gggaagaaggcacgacagtatgatgcttttgatcttggctttataaccactgacgatttc 227 ||| ||| ||||| ||||||||||| ||||| | ||||||||||||||||| |||||| Sbjct: 725 ggggtgaaagcacgtcagtatgatgcatttgaaataggctttataaccactgatgatttc 784 Query: 228 acaaatgccgatattctcgaagcaacttatcctgctgttgcaaagaggctacatggagat 287 ||||| || |||||||| ||||||||||||||||| ||||||||||||||||||| || Sbjct: 785 acaaacgctgatattctggaagcaacttatcctgccattgcaaagaggctacatggggac 844 Query: 288 tggattgatgaccctgctattcctatagtgactggtttccttgggaagggatggaaatca 347 ||| || || ||||||||||| ||||| |||||||| || || |||||||||||| | Sbjct: 845 tgggttactggtcctgctattccaatagtcactggttttctcggaaagggatggaaaact 904 Query: 348 tgtgcggtcacaacgttaggaaggggcggcagtgacttgactgctacaaccattggcaaa 407 |||| |||| || ||||| ||||| || || ||| |||| ||||| |||||||||||| Sbjct: 905 ggtgcaatcaccactttaggcaggggtggtagcgacctgacagctactaccattggcaaa 964 Query: 408 gccttggggttaagagaaatccaggtttggaaggatgtagacggtgtgttaacgtgtgat 467 |||||||| ||||||||||||||||||||||| ||||| || ||||| ||||| |||||| Sbjct: 965 gccttgggattaagagaaatccaggtttggaaagatgttgatggtgttttaacttgtgat 1024 Query: 468 ccaaatatttatgcaaacgcagtaccagtaccctacttgacttttgatga 517 || |||||| || |||| || ||| || || |||||||| |||||||| Sbjct: 1025 cctaatattcatccaaatgcgaaacctgtgccatacttgacatttgatga 1074
>dbj|AK102162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086G22, full insert sequence Length = 1983 Score = 329 bits (166), Expect = 5e-87 Identities = 394/470 (83%) Strand = Plus / Plus Query: 48 gagcaactgctcaagggtgttgctatgatgaaagagctgactcttaggacacgagattac 107 |||||||| || ||||| |||||||||||| |||||| |||||||||||| |||| || Sbjct: 610 gagcaacttcttaagggaattgctatgatgagagagcttactcttaggacaagagactat 669 Query: 108 cttgtttcgtttggtgaatgcatgtctacaagaatattttctgcatatttaaataaagtc 167 |||||||| || |||||||||||||| ||||| |||||| | ||| ||| |||||| | Sbjct: 670 cttgtttccttcggtgaatgcatgtcaacaaggatatttgcggcacttttgaataaactt 729 Query: 168 gggaagaaggcacgacagtatgatgcttttgatcttggctttataaccactgacgatttc 227 ||| ||| ||||| ||||||||||| ||||| | ||||||||||||||||| |||||| Sbjct: 730 ggggtgaaagcacgtcagtatgatgcatttgaaataggctttataaccactgatgatttc 789 Query: 228 acaaatgccgatattctcgaagcaacttatcctgctgttgcaaagaggctacatggagat 287 ||||| || |||||||| ||||||||||||||||| ||||||||||||||||||| || Sbjct: 790 acaaacgctgatattctggaagcaacttatcctgccattgcaaagaggctacatggggac 849 Query: 288 tggattgatgaccctgctattcctatagtgactggtttccttgggaagggatggaaatca 347 ||| || || ||||||||||| ||||| |||||||| || || |||||||||||| | Sbjct: 850 tgggttactggtcctgctattccaatagtcactggttttctcggaaagggatggaaaact 909 Query: 348 tgtgcggtcacaacgttaggaaggggcggcagtgacttgactgctacaaccattggcaaa 407 |||| |||| || ||||| ||||| || |||||| |||| ||||| |||||||||||| Sbjct: 910 ggtgcaatcaccactttaggcaggggtggtagtgacctgacagctactaccattggcaaa 969 Query: 408 gccttggggttaagagaaatccaggtttggaaggatgtagacggtgtgttaacgtgtgat 467 |||||||| ||||||||||||||||||||||| ||||| || ||||| ||||| |||||| Sbjct: 970 gccttgggattaagagaaatccaggtttggaaagatgttgatggtgttttaacttgtgat 1029 Query: 468 ccaaatatttatgcaaacgcagtaccagtaccctacttgacttttgatga 517 || |||||| || |||| || ||| || || |||||||| |||||||| Sbjct: 1030 cctaatattcatccaaatgcgaaacctgtgccatacttgacatttgatga 1079
>ref|NM_189995.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1533 Score = 192 bits (97), Expect = 8e-46 Identities = 331/409 (80%) Strand = Plus / Plus Query: 67 ttgctatgatgaaagagctgactcttaggacacgagattaccttgtttcgtttggtgaat 126 |||| ||||||||||||||||| ||| |||| || ||||||||||| ||||| || | Sbjct: 599 ttgcaatgatgaaagagctgacacttcggaccactgactaccttgtttcatttggggagt 658 Query: 127 gcatgtctacaagaatattttctgcatatttaaataaagtcgggaagaaggcacgacagt 186 ||||||||||| | || ||| |||| ||||| || ||| |||| || ||||| |||| Sbjct: 659 gcatgtctacacggatttttgctgcttatttgaacaaaatcggagtaaaagcacggcagt 718 Query: 187 atgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgatattctcg 246 | || || |||||| |||| || ||||| || ||||||||| ||| || || || | | Sbjct: 719 acgacgcatttgatattggtttcataacaacagacgatttcggaaacgcggacatcttgg 778 Query: 247 aagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgaccctgcta 306 | |||||||||||||||||||| ||||| |||||||||| |||||| ||| || || | Sbjct: 779 aggcaacttatcctgctgttgcgaagagattacatggagactggattcgtgatccagcga 838 Query: 307 ttcctatagtgactggtttccttgggaagggatggaaatcatgtgcggtcacaacgttag 366 | ||||| || ||||| |||||||||||||| ||||||||| | || || || || |||| Sbjct: 839 tacctattgttactgggttccttgggaagggctggaaatcaggcgctgtaaccactttag 898 Query: 367 gaaggggcggcagtgacttgactgctacaaccattggcaaagccttggggttaagagaaa 426 | | || ||||||||||||||||||||||||||||| |||||| ||||||| ||||||| Sbjct: 899 gccgaggtggcagtgacttgactgctacaaccattggtaaagccctggggttgagagaaa 958 Query: 427 tccaggtttggaaggatgtagacggtgtgttaacgtgtgatccaaatat 475 | ||||| ||||| ||||| || ||||| | || |||||||||||||| Sbjct: 959 ttcaggtatggaaagatgttgatggtgtactgacctgtgatccaaatat 1007
>dbj|AK073189.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033004I10, full insert sequence Length = 2037 Score = 192 bits (97), Expect = 8e-46 Identities = 331/409 (80%) Strand = Plus / Plus Query: 67 ttgctatgatgaaagagctgactcttaggacacgagattaccttgtttcgtttggtgaat 126 |||| ||||||||||||||||| ||| |||| || ||||||||||| ||||| || | Sbjct: 654 ttgcaatgatgaaagagctgacacttcggaccactgactaccttgtttcatttggggagt 713 Query: 127 gcatgtctacaagaatattttctgcatatttaaataaagtcgggaagaaggcacgacagt 186 ||||||||||| | || ||| |||| ||||| || ||| |||| || ||||| |||| Sbjct: 714 gcatgtctacacggatttttgctgcttatttgaacaaaatcggagtaaaagcacggcagt 773 Query: 187 atgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgatattctcg 246 | || || |||||| |||| || ||||| || ||||||||| ||| || || || | | Sbjct: 774 acgacgcatttgatattggtttcataacaacagacgatttcggaaacgcggacatcttgg 833 Query: 247 aagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgaccctgcta 306 | |||||||||||||||||||| ||||| |||||||||| |||||| ||| || || | Sbjct: 834 aggcaacttatcctgctgttgcgaagagattacatggagactggattcgtgatccagcga 893 Query: 307 ttcctatagtgactggtttccttgggaagggatggaaatcatgtgcggtcacaacgttag 366 | ||||| || ||||| |||||||||||||| ||||||||| | || || || || |||| Sbjct: 894 tacctattgttactgggttccttgggaagggctggaaatcaggcgctgtaaccactttag 953 Query: 367 gaaggggcggcagtgacttgactgctacaaccattggcaaagccttggggttaagagaaa 426 | | || ||||||||||||||||||||||||||||| |||||| ||||||| ||||||| Sbjct: 954 gccgaggtggcagtgacttgactgctacaaccattggtaaagccctggggttgagagaaa 1013 Query: 427 tccaggtttggaaggatgtagacggtgtgttaacgtgtgatccaaatat 475 | ||||| ||||| ||||| || ||||| | || |||||||||||||| Sbjct: 1014 ttcaggtatggaaagatgttgatggtgtactgacctgtgatccaaatat 1062
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 184 bits (93), Expect = 2e-43 Identities = 135/149 (90%) Strand = Plus / Plus Query: 183 cagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgatatt 242 ||||||||||| |||||| ||||||||||||| ||||| |||||||||||||| || ||| Sbjct: 35489041 cagtatgatgcatttgatattggctttataactactgatgatttcacaaatgcggacatt 35489100 Query: 243 ctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgaccct 302 || ||||| || ||||||||||||||||||||| |||| || ||||||||||| |||||| Sbjct: 35489101 cttgaagcgacatatcctgctgttgcaaagaggttacagggtgattggattgacgaccct 35489160 Query: 303 gctattcctatagtgactggtttccttgg 331 |||||||||||||| |||||||||||||| Sbjct: 35489161 gctattcctatagttactggtttccttgg 35489189 Score = 172 bits (87), Expect = 7e-40 Identities = 135/151 (89%) Strand = Plus / Plus Query: 28 caggttttttggacgaattggagcaactgctcaagggtgttgctatgatgaaagagctga 87 ||||||| ||||| |||||||| ||||| || ||||||||||||||||||||||| || | Sbjct: 35488142 caggtttattggaagaattggaacaacttcttaagggtgttgctatgatgaaagaactaa 35488201 Query: 88 ctcttaggacacgagattaccttgtttcgtttggtgaatgcatgtctacaagaatatttt 147 ||| ||||||||| |||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 35488202 ctcctaggacacgggattaccttgtttccttcggtgaatgcatgtctacaagaatatttg 35488261 Query: 148 ctgcatatttaaataaagtcgggaagaaggc 178 |||||||||| |||||| | ||||| ||||| Sbjct: 35488262 ctgcatatttgaataaacttgggaaaaaggc 35488292 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 334 agggatggaaatcatgtgcggtcacaacgttaggaaggggcggcagtgacttgactgcta 393 ||||||||||||||||||| ||||| || ||||| || || ||||| ||||||||||||| Sbjct: 35489312 agggatggaaatcatgtgctgtcaccactttaggcagaggtggcagcgacttgactgcta 35489371 Query: 394 caaccattggcaaagccttggggttaagagaaatccaggtttg 436 | |||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 35489372 ccaccattggcaaagcgttgggattaagagagatccaggtttg 35489414 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 429 caggtttggaaggatgtagacggtgtgttaacgtgtgatccaaatatttatgcaaacgca 488 ||||| ||||||||||| || |||||||| || |||||||| ||||||| ||| ||||| Sbjct: 35489663 caggtatggaaggatgttgatggtgtgttgacatgtgatcctaatatttgtgcgaacgcg 35489722 Query: 489 gtaccagtaccctacttgacttttga 514 |||| |||||||||||||||||||| Sbjct: 35489723 atacctgtaccctacttgacttttga 35489748
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 184 bits (93), Expect = 2e-43 Identities = 135/149 (90%) Strand = Plus / Plus Query: 183 cagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgatatt 242 ||||||||||| |||||| ||||||||||||| ||||| |||||||||||||| || ||| Sbjct: 35579113 cagtatgatgcatttgatattggctttataactactgatgatttcacaaatgcggacatt 35579172 Query: 243 ctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgaccct 302 || ||||| || ||||||||||||||||||||| |||| || ||||||||||| |||||| Sbjct: 35579173 cttgaagcgacatatcctgctgttgcaaagaggttacagggtgattggattgacgaccct 35579232 Query: 303 gctattcctatagtgactggtttccttgg 331 |||||||||||||| |||||||||||||| Sbjct: 35579233 gctattcctatagttactggtttccttgg 35579261 Score = 172 bits (87), Expect = 7e-40 Identities = 135/151 (89%) Strand = Plus / Plus Query: 28 caggttttttggacgaattggagcaactgctcaagggtgttgctatgatgaaagagctga 87 ||||||| ||||| |||||||| ||||| || ||||||||||||||||||||||| || | Sbjct: 35578214 caggtttattggaagaattggaacaacttcttaagggtgttgctatgatgaaagaactaa 35578273 Query: 88 ctcttaggacacgagattaccttgtttcgtttggtgaatgcatgtctacaagaatatttt 147 ||| ||||||||| |||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 35578274 ctcctaggacacgggattaccttgtttccttcggtgaatgcatgtctacaagaatatttg 35578333 Query: 148 ctgcatatttaaataaagtcgggaagaaggc 178 |||||||||| |||||| | ||||| ||||| Sbjct: 35578334 ctgcatatttgaataaacttgggaaaaaggc 35578364 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 334 agggatggaaatcatgtgcggtcacaacgttaggaaggggcggcagtgacttgactgcta 393 ||||||||||||||||||| ||||| || ||||| || || ||||| ||||||||||||| Sbjct: 35579384 agggatggaaatcatgtgctgtcaccactttaggcagaggtggcagcgacttgactgcta 35579443 Query: 394 caaccattggcaaagccttggggttaagagaaatccaggtttg 436 | |||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 35579444 ccaccattggcaaagcgttgggattaagagagatccaggtttg 35579486 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 429 caggtttggaaggatgtagacggtgtgttaacgtgtgatccaaatatttatgcaaacgca 488 ||||| ||||||||||| || |||||||| || |||||||| ||||||| ||| ||||| Sbjct: 35579735 caggtatggaaggatgttgatggtgtgttgacatgtgatcctaatatttgtgcgaacgcg 35579794 Query: 489 gtaccagtaccctacttgacttttga 514 |||| |||||||||||||||||||| Sbjct: 35579795 atacctgtaccctacttgacttttga 35579820
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 184 bits (93), Expect = 2e-43 Identities = 135/149 (90%) Strand = Plus / Plus Query: 183 cagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgatatt 242 ||||||||||| |||||| ||||||||||||| ||||| |||||||||||||| || ||| Sbjct: 22004 cagtatgatgcatttgatattggctttataactactgatgatttcacaaatgcggacatt 22063 Query: 243 ctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgaccct 302 || ||||| || ||||||||||||||||||||| |||| || ||||||||||| |||||| Sbjct: 22064 cttgaagcgacatatcctgctgttgcaaagaggttacagggtgattggattgacgaccct 22123 Query: 303 gctattcctatagtgactggtttccttgg 331 |||||||||||||| |||||||||||||| Sbjct: 22124 gctattcctatagttactggtttccttgg 22152 Score = 172 bits (87), Expect = 7e-40 Identities = 135/151 (89%) Strand = Plus / Plus Query: 28 caggttttttggacgaattggagcaactgctcaagggtgttgctatgatgaaagagctga 87 ||||||| ||||| |||||||| ||||| || ||||||||||||||||||||||| || | Sbjct: 21105 caggtttattggaagaattggaacaacttcttaagggtgttgctatgatgaaagaactaa 21164 Query: 88 ctcttaggacacgagattaccttgtttcgtttggtgaatgcatgtctacaagaatatttt 147 ||| ||||||||| |||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 21165 ctcctaggacacgggattaccttgtttccttcggtgaatgcatgtctacaagaatatttg 21224 Query: 148 ctgcatatttaaataaagtcgggaagaaggc 178 |||||||||| |||||| | ||||| ||||| Sbjct: 21225 ctgcatatttgaataaacttgggaaaaaggc 21255 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 334 agggatggaaatcatgtgcggtcacaacgttaggaaggggcggcagtgacttgactgcta 393 ||||||||||||||||||| ||||| || ||||| || || ||||| ||||||||||||| Sbjct: 22275 agggatggaaatcatgtgctgtcaccactttaggcagaggtggcagcgacttgactgcta 22334 Query: 394 caaccattggcaaagccttggggttaagagaaatccaggtttg 436 | |||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 22335 ccaccattggcaaagcgttgggattaagagagatccaggtttg 22377 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 429 caggtttggaaggatgtagacggtgtgttaacgtgtgatccaaatatttatgcaaacgca 488 ||||| ||||||||||| || |||||||| || |||||||| ||||||| ||| ||||| Sbjct: 22626 caggtatggaaggatgttgatggtgtgttgacatgtgatcctaatatttgtgcgaacgcg 22685 Query: 489 gtaccagtaccctacttgacttttga 514 |||| |||||||||||||||||||| Sbjct: 22686 atacctgtaccctacttgacttttga 22711
>dbj|AB042521.1| Oryza sativa mRNA for aspartate kinase, partial cds Length = 1343 Score = 149 bits (75), Expect = 1e-32 Identities = 186/223 (83%) Strand = Plus / Plus Query: 253 cttatcctgctgttgcaaagaggctacatggagattggattgatgaccctgctattccta 312 |||||||||||||||| ||||| |||||||||| |||||| ||| || || || |||| Sbjct: 137 cttatcctgctgttgcgaagagattacatggagactggattcgtgatccagcgataccta 196 Query: 313 tagtgactggtttccttgggaagggatggaaatcatgtgcggtcacaacgttaggaaggg 372 | || ||||| |||||||||||||| ||||||||| | || || || || ||||| | | Sbjct: 197 ttgttactgggttccttgggaagggctggaaatcaggcgctgtaaccactttaggccgag 256 Query: 373 gcggcagtgacttgactgctacaaccattggcaaagccttggggttaagagaaatccagg 432 | |||||||| |||||||||||||||||||| |||||| ||||||| |||||||| |||| Sbjct: 257 gtggcagtgatttgactgctacaaccattggtaaagccctggggttgagagaaattcagg 316 Query: 433 tttggaaggatgtagacggtgtgttaacgtgtgatccaaatat 475 | ||||| ||||| || ||||| | || |||||||||||||| Sbjct: 317 tatggaaagatgttgatggtgtactgacctgtgatccaaatat 359
>gb|AF135862.1|AF135862 Glycine max precursor monofunctional aspartokinase mRNA, complete cds Length = 1695 Score = 145 bits (73), Expect = 2e-31 Identities = 319/401 (79%) Strand = Plus / Plus Query: 117 tttggtgaatgcatgtctacaagaatattttctgcatatttaaataaagtcgggaagaag 176 ||||| ||||||||||| ||||| || ||| |||||||| | |||||| | || ||| Sbjct: 607 tttggagaatgcatgtcgacaaggatctttgctgcatatcttaataaaataggtgtcaag 666 Query: 177 gcacgacagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgcc 236 || || || |||||||| ||||| |||| |||||||| |||||||| ||||||||||| Sbjct: 667 gctcgccaatatgatgcatttgagattggttttataacaactgacgacttcacaaatgcg 726 Query: 237 gatattctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggattgat 296 || ||| | |||||||||||||| |||||||||||||| | ||||| |||||| | Sbjct: 727 gacattttggaagcaacttatccagctgttgcaaagagattgcatggtgattggctctcc 786 Query: 297 gaccctgctattcctatagtgactggtttccttgggaagggatggaaatcatgtgcggtc 356 || ||||| ||| | || || ||||| |||||||| |||| ||||||||||||| || Sbjct: 787 gatcctgcaattgcaattgttactggcttccttggaaaggcccggaaatcatgtgcagtg 846 Query: 357 acaacgttaggaaggggcggcagtgacttgactgctacaaccattggcaaagccttgggg 416 ||||| | ||||| || |||||||| ||||| |||||||| ||||| ||||| | ||| Sbjct: 847 acaacactgggaagagggggcagtgatttgacggctacaacaattgggaaagcactaggg 906 Query: 417 ttaagagaaatccaggtttggaaggatgtagacggtgtgttaacgtgtgatccaaatatt 476 || || |||||||| ||||||||||| || ||||| |||| |||||||||||||| Sbjct: 907 ttgcctgagatccaggtatggaaggatgttgatggtgtcctaacctgtgatccaaatata 966 Query: 477 tatgcaaacgcagtaccagtaccctacttgacttttgatga 517 || |||| |||| ||| || || || ||||| |||||||| Sbjct: 967 tacccaaaagcagaacctgttccttatttgacatttgatga 1007
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 133 bits (67), Expect = 6e-28 Identities = 124/143 (86%) Strand = Plus / Minus Query: 183 cagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgatatt 242 ||||||||||| ||||| | ||||||||||||||||| ||||||||||| || |||||| Sbjct: 11899597 cagtatgatgcatttgaaataggctttataaccactgatgatttcacaaacgctgatatt 11899538 Query: 243 ctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgaccct 302 || ||||||||||||||||| ||||||||||||||||||| || ||| || || ||| Sbjct: 11899537 ctggaagcaacttatcctgccattgcaaagaggctacatggggactgggttactggtcct 11899478 Query: 303 gctattcctatagtgactggttt 325 |||||||| ||||| |||||||| Sbjct: 11899477 gctattccaatagtcactggttt 11899455 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 48 gagcaactgctcaagggtgttgctatgatgaaagagctgactcttaggacacgagattac 107 |||||||| || ||||| ||||||||||||||||||| |||||||||||| |||| || Sbjct: 11900069 gagcaacttcttaagggaattgctatgatgaaagagcttactcttaggacaagagactat 11900010 Query: 108 cttgtttcgtttggtgaatgcatgtctacaagaatattt 146 |||||||| || |||||||||||||| ||||| |||||| Sbjct: 11900009 cttgtttccttcggtgaatgcatgtcaacaaggatattt 11899971 Score = 93.7 bits (47), Expect = 5e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 334 agggatggaaatcatgtgcggtcacaacgttaggaaggggcggcagtgacttgactgcta 393 ||||||||||| | |||| |||| || ||||| ||||| || |||||| |||| |||| Sbjct: 11899351 agggatggaaaactggtgcaatcaccactttaggcaggggtggtagtgacctgacagcta 11899292 Query: 394 caaccattggcaaagccttggggttaagagaaatccaggtttg 436 | |||||||||||||||||||| |||||||||||||||||||| Sbjct: 11899291 ctaccattggcaaagccttgggattaagagaaatccaggtttg 11899249
>dbj|AP006343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1032F05 Length = 151412 Score = 133 bits (67), Expect = 6e-28 Identities = 124/143 (86%) Strand = Plus / Minus Query: 183 cagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgatatt 242 ||||||||||| ||||| | ||||||||||||||||| ||||||||||| || |||||| Sbjct: 131897 cagtatgatgcatttgaaataggctttataaccactgatgatttcacaaacgctgatatt 131838 Query: 243 ctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgaccct 302 || ||||||||||||||||| ||||||||||||||||||| || ||| || || ||| Sbjct: 131837 ctggaagcaacttatcctgccattgcaaagaggctacatggggactgggttactggtcct 131778 Query: 303 gctattcctatagtgactggttt 325 |||||||| ||||| |||||||| Sbjct: 131777 gctattccaatagtcactggttt 131755 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 48 gagcaactgctcaagggtgttgctatgatgaaagagctgactcttaggacacgagattac 107 |||||||| || ||||| ||||||||||||||||||| |||||||||||| |||| || Sbjct: 132369 gagcaacttcttaagggaattgctatgatgaaagagcttactcttaggacaagagactat 132310 Query: 108 cttgtttcgtttggtgaatgcatgtctacaagaatattt 146 |||||||| || |||||||||||||| ||||| |||||| Sbjct: 132309 cttgtttccttcggtgaatgcatgtcaacaaggatattt 132271 Score = 93.7 bits (47), Expect = 5e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 334 agggatggaaatcatgtgcggtcacaacgttaggaaggggcggcagtgacttgactgcta 393 ||||||||||| | |||| |||| || ||||| ||||| || |||||| |||| |||| Sbjct: 131651 agggatggaaaactggtgcaatcaccactttaggcaggggtggtagtgacctgacagcta 131592 Query: 394 caaccattggcaaagccttggggttaagagaaatccaggtttg 436 | |||||||||||||||||||| |||||||||||||||||||| Sbjct: 131591 ctaccattggcaaagccttgggattaagagaaatccaggtttg 131549
>dbj|AP006529.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1114D08 Length = 148354 Score = 133 bits (67), Expect = 6e-28 Identities = 124/143 (86%) Strand = Plus / Minus Query: 183 cagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgatatt 242 ||||||||||| ||||| | ||||||||||||||||| ||||||||||| || |||||| Sbjct: 30638 cagtatgatgcatttgaaataggctttataaccactgatgatttcacaaacgctgatatt 30579 Query: 243 ctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgaccct 302 || ||||||||||||||||| ||||||||||||||||||| || ||| || || ||| Sbjct: 30578 ctggaagcaacttatcctgccattgcaaagaggctacatggggactgggttactggtcct 30519 Query: 303 gctattcctatagtgactggttt 325 |||||||| ||||| |||||||| Sbjct: 30518 gctattccaatagtcactggttt 30496 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 48 gagcaactgctcaagggtgttgctatgatgaaagagctgactcttaggacacgagattac 107 |||||||| || ||||| ||||||||||||||||||| |||||||||||| |||| || Sbjct: 31110 gagcaacttcttaagggaattgctatgatgaaagagcttactcttaggacaagagactat 31051 Query: 108 cttgtttcgtttggtgaatgcatgtctacaagaatattt 146 |||||||| || |||||||||||||| ||||| |||||| Sbjct: 31050 cttgtttccttcggtgaatgcatgtcaacaaggatattt 31012 Score = 93.7 bits (47), Expect = 5e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 334 agggatggaaatcatgtgcggtcacaacgttaggaaggggcggcagtgacttgactgcta 393 ||||||||||| | |||| |||| || ||||| ||||| || |||||| |||| |||| Sbjct: 30392 agggatggaaaactggtgcaatcaccactttaggcaggggtggtagtgacctgacagcta 30333 Query: 394 caaccattggcaaagccttggggttaagagaaatccaggtttg 436 | |||||||||||||||||||| |||||||||||||||||||| Sbjct: 30332 ctaccattggcaaagccttgggattaagagaaatccaggtttg 30290
>gb|AY109464.1| Zea mays CL754_1 mRNA sequence Length = 3000 Score = 123 bits (62), Expect = 6e-25 Identities = 188/230 (81%) Strand = Plus / Plus Query: 246 gaagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgaccctgct 305 |||||||| |||||||||||||| ||||| || ||||| || ||||| | || || || Sbjct: 920 gaagcaacctatcctgctgttgcgaagagacttcatggggactggatacaggatccagcg 979 Query: 306 attcctatagtgactggtttccttgggaagggatggaaatcatgtgcggtcacaacgtta 365 || ||| | || ||||| |||||||||||||| |||||||| |||| || || || ||| Sbjct: 980 atacctgttgttactgggttccttgggaagggctggaaatctggtgctgtaactacttta 1039 Query: 366 ggaaggggcggcagtgacttgactgctacaaccattggcaaagccttggggttaagagaa 425 || | || || |||||||||||||||||||||||||| ||||||||||| | |||||| Sbjct: 1040 ggccgaggtggtagtgacttgactgctacaaccattggtaaagccttgggactgagagaa 1099 Query: 426 atccaggtttggaaggatgtagacggtgtgttaacgtgtgatccaaatat 475 || ||||| ||||| ||||| || ||||| | || |||||||||||||| Sbjct: 1100 attcaggtatggaaagatgttgatggtgtacttacttgtgatccaaatat 1149 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 69 gctatgatgaaagagctgactcttaggacacgagattaccttgtttcgtttggtgaatgc 128 |||||||||||||||||||| | |||||| | || ||||||||||| ||||| |||||| Sbjct: 743 gctatgatgaaagagctgacgcctaggaccagtgactaccttgtttcatttggagaatgc 802 Query: 129 atgtc 133 ||||| Sbjct: 803 atgtc 807
>ref|NM_121331.2| Arabidopsis thaliana AK-LYS1 AT5G13280 (AK-LYS1) mRNA, complete cds Length = 1970 Score = 113 bits (57), Expect = 6e-22 Identities = 225/281 (80%) Strand = Plus / Plus Query: 174 aaggcacgacagtatgatgcttttgatcttggctttataaccactgacgatttcacaaat 233 |||||||| || |||||||| ||||| |||| || || || || || |||||||||||| Sbjct: 748 aaggcacgccaatatgatgcatttgaaattggtttcattacaacggatgatttcacaaat 807 Query: 234 gccgatattctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggatt 293 | ||||| || || ||||||||||| |||||||| ||||| || ||| |||||||| Sbjct: 808 ggggatatcctggaggcaacttatccagctgttgccaagagattatatgatgattggatg 867 Query: 294 gatgaccctgctattcctatagtgactggtttccttgggaagggatggaaatcatgtgcg 353 |||| |||||| ||||||| || || ||||||||||||||||| |||||| | ||||| Sbjct: 868 catgatcctgctgttcctattgtaacaggtttccttgggaagggttggaaaactggtgcg 927 Query: 354 gtcacaacgttaggaaggggcggcagtgacttgactgctacaaccattggcaaagccttg 413 || || || || || ||||| |||||||| ||||| || || || ||||| ||||| ||| Sbjct: 928 gttactaccttgggtaggggtggcagtgatttgacggcaaccacaattggtaaagcgttg 987 Query: 414 gggttaagagaaatccaggtttggaaggatgtagacggtgt 454 || || | ||| || ||||| ||||| ||||| || ||||| Sbjct: 988 ggtttgaaagagattcaggtgtggaaagatgtcgatggtgt 1028
>gb|BT000493.1| Arabidopsis thaliana aspartate kinase (At5g13280/T31B5_100) mRNA, complete cds Length = 1710 Score = 113 bits (57), Expect = 6e-22 Identities = 225/281 (80%) Strand = Plus / Plus Query: 174 aaggcacgacagtatgatgcttttgatcttggctttataaccactgacgatttcacaaat 233 |||||||| || |||||||| ||||| |||| || || || || || |||||||||||| Sbjct: 670 aaggcacgccaatatgatgcatttgaaattggtttcattacaacggatgatttcacaaat 729 Query: 234 gccgatattctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggatt 293 | ||||| || || ||||||||||| |||||||| ||||| || ||| |||||||| Sbjct: 730 ggggatatcctggaggcaacttatccagctgttgccaagagattatatgatgattggatg 789 Query: 294 gatgaccctgctattcctatagtgactggtttccttgggaagggatggaaatcatgtgcg 353 |||| |||||| ||||||| || || ||||||||||||||||| |||||| | ||||| Sbjct: 790 catgatcctgctgttcctattgtaacaggtttccttgggaagggttggaaaactggtgcg 849 Query: 354 gtcacaacgttaggaaggggcggcagtgacttgactgctacaaccattggcaaagccttg 413 || || || || || ||||| |||||||| ||||| || || || ||||| ||||| ||| Sbjct: 850 gttactaccttgggtaggggtggcagtgatttgacggcaaccacaattggtaaagcgttg 909 Query: 414 gggttaagagaaatccaggtttggaaggatgtagacggtgt 454 || || | ||| || ||||| ||||| ||||| || ||||| Sbjct: 910 ggtttgaaagagattcaggtgtggaaagatgtcgatggtgt 950
>gb|AY057674.1| Arabidopsis thaliana AT5g13280/T31B5_100 mRNA, complete cds Length = 1971 Score = 113 bits (57), Expect = 6e-22 Identities = 225/281 (80%) Strand = Plus / Plus Query: 174 aaggcacgacagtatgatgcttttgatcttggctttataaccactgacgatttcacaaat 233 |||||||| || |||||||| ||||| |||| || || || || || |||||||||||| Sbjct: 748 aaggcacgccaatatgatgcatttgaaattggtttcattacaacggatgatttcacaaat 807 Query: 234 gccgatattctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggatt 293 | ||||| || || ||||||||||| |||||||| ||||| || ||| |||||||| Sbjct: 808 ggggatatcctggaggcaacttatccagctgttgccaagagattatatgatgattggatg 867 Query: 294 gatgaccctgctattcctatagtgactggtttccttgggaagggatggaaatcatgtgcg 353 |||| |||||| ||||||| || || ||||||||||||||||| |||||| | ||||| Sbjct: 868 catgatcctgctgttcctattgtaacaggtttccttgggaagggttggaaaactggtgcg 927 Query: 354 gtcacaacgttaggaaggggcggcagtgacttgactgctacaaccattggcaaagccttg 413 || || || || || ||||| |||||||| ||||| || || || ||||| ||||| ||| Sbjct: 928 gttactaccttgggtaggggtggcagtgatttgacggcaaccacaattggtaaagcgttg 987 Query: 414 gggttaagagaaatccaggtttggaaggatgtagacggtgt 454 || || | ||| || ||||| ||||| ||||| || ||||| Sbjct: 988 ggtttgaaagagattcaggtgtggaaagatgtcgatggtgt 1028
>gb|AY089207.1| Arabidopsis thaliana clone 94688 mRNA, complete sequence Length = 1933 Score = 113 bits (57), Expect = 6e-22 Identities = 225/281 (80%) Strand = Plus / Plus Query: 174 aaggcacgacagtatgatgcttttgatcttggctttataaccactgacgatttcacaaat 233 |||||||| || |||||||| ||||| |||| || || || || || |||||||||||| Sbjct: 714 aaggcacgccaatatgatgcatttgaaattggtttcattacaacggatgatttcacaaat 773 Query: 234 gccgatattctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggatt 293 | ||||| || || ||||||||||| |||||||| ||||| || ||| |||||||| Sbjct: 774 ggggatatcctggaggcaacttatccagctgttgccaagagattatatgatgattggatg 833 Query: 294 gatgaccctgctattcctatagtgactggtttccttgggaagggatggaaatcatgtgcg 353 |||| |||||| ||||||| || || ||||||||||||||||| |||||| | ||||| Sbjct: 834 catgatcctgctgttcctattgtaacaggtttccttgggaagggttggaaaactggtgcg 893 Query: 354 gtcacaacgttaggaaggggcggcagtgacttgactgctacaaccattggcaaagccttg 413 || || || || || ||||| |||||||| ||||| || || || ||||| ||||| ||| Sbjct: 894 gttactaccttgggtaggggtggcagtgatttgacggcaaccacaattggtaaagcgttg 953 Query: 414 gggttaagagaaatccaggtttggaaggatgtagacggtgt 454 || || | ||| || ||||| ||||| ||||| || ||||| Sbjct: 954 ggtttgaaagagattcaggtgtggaaagatgtcgatggtgt 994
>emb|X98873.1|ATAKLYS1 A.thaliana mRNA for aspartate kinase Length = 1980 Score = 113 bits (57), Expect = 6e-22 Identities = 225/281 (80%) Strand = Plus / Plus Query: 174 aaggcacgacagtatgatgcttttgatcttggctttataaccactgacgatttcacaaat 233 |||||||| || |||||||| ||||| |||| || || || || || |||||||||||| Sbjct: 748 aaggcacgccaatatgatgcatttgaaattggtttcattacaacggatgatttcacaaat 807 Query: 234 gccgatattctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggatt 293 | ||||| || || ||||||||||| |||||||| ||||| || ||| |||||||| Sbjct: 808 ggggatatcctggaggcaacttatccagctgttgccaagagattatatgatgattggatg 867 Query: 294 gatgaccctgctattcctatagtgactggtttccttgggaagggatggaaatcatgtgcg 353 |||| |||||| ||||||| || || ||||||||||||||||| |||||| | ||||| Sbjct: 868 catgatcctgctgttcctattgtaacaggtttccttgggaagggttggaaaactggtgcg 927 Query: 354 gtcacaacgttaggaaggggcggcagtgacttgactgctacaaccattggcaaagccttg 413 || || || || || ||||| |||||||| ||||| || || || ||||| ||||| ||| Sbjct: 928 gttactaccttgggtaggggtggcagtgatttgacggcaaccacaattggtaaagcgttg 987 Query: 414 gggttaagagaaatccaggtttggaaggatgtagacggtgt 454 || || | ||| || ||||| ||||| ||||| || ||||| Sbjct: 988 ggtttgaaagagattcaggtgtggaaagatgtcgatggtgt 1028
>emb|BX832262.1|CNS09YPM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1839 Score = 105 bits (53), Expect = 1e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 222 gatttcacaaatgccgatattctcgaagcaacttatcctgctgttgcaaagaggctacat 281 ||||||||||||| ||||| || || ||||||||||| |||||||| ||||| || || Sbjct: 740 gatttcacaaatggggatatcctggaggcaacttatccagctgttgccaagagattatat 799 Query: 282 ggagattggattgatgaccctgctattcctatagtgactggtttccttgggaagggatgg 341 | |||||||| |||| |||||| ||||||| || || ||||||||||||||||| ||| Sbjct: 800 gatgattggatgcatgatcctgctgttcctattgtaacaggtttccttgggaagggttgg 859 Query: 342 aaatcatgtgcggtcacaacgttaggaaggggcggcagtgacttgactgctacaaccatt 401 ||| | ||||||| || || || || ||||| |||||||| ||||| || || || ||| Sbjct: 860 aaaactggtgcggttactaccttgggtaggggtggcagtgatttgacggcaaccacaatt 919 Query: 402 ggcaaagccttggggttaagagaaatccaggtttggaaggatgtagacggtgt 454 || ||||| ||||| || | ||| || ||||| ||||| ||||| || ||||| Sbjct: 920 ggtaaagcgttgggtttgaaagagattcaggtgtggaaagatgtcgatggtgt 972
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 375 ggcagtgacttgactgctacaaccattggcaaagccttggggttaagagaaatccaggt 433 ||||||||||||||||||||||||||||| |||||| ||||||| |||||||| ||||| Sbjct: 40703258 ggcagtgacttgactgctacaaccattggtaaagccctggggttgagagaaattcaggt 40703200 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 249 gcaacttatcctgctgttgcaaagaggctacatggagattggattgatgaccctgctatt 308 |||||||||||||||||||| ||||| |||||||||| |||||| ||| || || || Sbjct: 40703481 gcaacttatcctgctgttgcgaagagattacatggagactggattcgtgatccagcgata 40703422 Query: 309 cctatagtgactggtttccttgggaagg 336 ||||| || ||||| ||||||||||||| Sbjct: 40703421 cctattgttactgggttccttgggaagg 40703394 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 67 ttgctatgatgaaagagctgactcttaggacacgagattaccttgtttcgtttggtgaat 126 |||| ||||||||||||||||| ||| |||| || ||||||||||| ||||| || | Sbjct: 40704034 ttgcaatgatgaaagagctgacacttcggaccactgactaccttgtttcatttggggagt 40703975 Query: 127 gcatgtctaca 137 ||||||||||| Sbjct: 40703974 gcatgtctaca 40703964
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 375 ggcagtgacttgactgctacaaccattggcaaagccttggggttaagagaaatccaggt 433 ||||||||||||||||||||||||||||| |||||| ||||||| |||||||| ||||| Sbjct: 145236 ggcagtgacttgactgctacaaccattggtaaagccctggggttgagagaaattcaggt 145178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 249 gcaacttatcctgctgttgcaaagaggctacatggagattggattgatgaccctgctatt 308 |||||||||||||||||||| ||||| |||||||||| |||||| ||| || || || Sbjct: 145459 gcaacttatcctgctgttgcgaagagattacatggagactggattcgtgatccagcgata 145400 Query: 309 cctatagtgactggtttccttgggaagg 336 ||||| || ||||| ||||||||||||| Sbjct: 145399 cctattgttactgggttccttgggaagg 145372 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 67 ttgctatgatgaaagagctgactcttaggacacgagattaccttgtttcgtttggtgaat 126 |||| ||||||||||||||||| ||| |||| || ||||||||||| ||||| || | Sbjct: 146012 ttgcaatgatgaaagagctgacacttcggaccactgactaccttgtttcatttggggagt 145953 Query: 127 gcatgtctaca 137 ||||||||||| Sbjct: 145952 gcatgtctaca 145942
>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0052O12 Length = 167881 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 375 ggcagtgacttgactgctacaaccattggcaaagccttggggttaagagaaatccaggt 433 ||||||||||||||||||||||||||||| |||||| ||||||| |||||||| ||||| Sbjct: 5904 ggcagtgacttgactgctacaaccattggtaaagccctggggttgagagaaattcaggt 5846 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 249 gcaacttatcctgctgttgcaaagaggctacatggagattggattgatgaccctgctatt 308 |||||||||||||||||||| ||||| |||||||||| |||||| ||| || || || Sbjct: 6127 gcaacttatcctgctgttgcgaagagattacatggagactggattcgtgatccagcgata 6068 Query: 309 cctatagtgactggtttccttgggaagg 336 ||||| || ||||| ||||||||||||| Sbjct: 6067 cctattgttactgggttccttgggaagg 6040 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 67 ttgctatgatgaaagagctgactcttaggacacgagattaccttgtttcgtttggtgaat 126 |||| ||||||||||||||||| ||| |||| || ||||||||||| ||||| || | Sbjct: 6680 ttgcaatgatgaaagagctgacacttcggaccactgactaccttgtttcatttggggagt 6621 Query: 127 gcatgtctaca 137 ||||||||||| Sbjct: 6620 gcatgtctaca 6610
>emb|AL163491.1|ATT31B5 Arabidopsis thaliana DNA chromosome 5, BAC clone T31B5 (ESSA project) Length = 82612 Score = 83.8 bits (42), Expect = 5e-13 Identities = 126/154 (81%) Strand = Plus / Plus Query: 183 cagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgatatt 242 ||||||||||| ||||| |||| || || || || || ||||||||||||| ||||| Sbjct: 47663 cagtatgatgcatttgaaattggtttcattacaacggatgatttcacaaatggggatatc 47722 Query: 243 ctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgaccct 302 || || ||||||||||| |||||||| ||||| || ||| |||||||| |||| ||| Sbjct: 47723 ctggaggcaacttatccagctgttgccaagagattatatgatgattggatgcatgatcct 47782 Query: 303 gctattcctatagtgactggtttccttgggaagg 336 ||| ||||||| || || |||||||||||||||| Sbjct: 47783 gctgttcctattgtaacaggtttccttgggaagg 47816
>gb|AC149131.3| Medicago truncatula chromosome 7 BAC clone mth2-19e15, complete sequence Length = 122492 Score = 69.9 bits (35), Expect = 8e-09 Identities = 101/123 (82%) Strand = Plus / Minus Query: 42 gaattggagcaactgctcaagggtgttgctatgatgaaagagctgactcttaggacacga 101 |||||||||||||| || ||||| |||||||||||||||| ||||||| |||| | | Sbjct: 1313 gaattggagcaacttctgaaggggattgctatgatgaaagaactgactccacggactcaa 1254 Query: 102 gattaccttgtttcgtttggtgaatgcatgtctacaagaatattttctgcatatttaaat 161 |||||| | ||||| ||||| || |||||||| || || || ||| |||||||| | ||| Sbjct: 1253 gattacttggtttcatttggagagtgcatgtccactaggatctttgctgcatatcttaat 1194 Query: 162 aaa 164 ||| Sbjct: 1193 aaa 1191 Score = 67.9 bits (34), Expect = 3e-08 Identities = 124/154 (80%) Strand = Plus / Minus Query: 183 cagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgatatt 242 ||||||||||| || || |||| |||||||| ||||| || ||||||||||| || ||| Sbjct: 1036 cagtatgatgcattcgagattggttttataacaactgatgacttcacaaatgcggacatt 977 Query: 243 ctcgaagcaacttatcctgctgttgcaaagaggctacatggagattggattgatgaccct 302 | || ||||| ||||| |||||||| |||||| ||||| | |||||| || ||| ||| Sbjct: 976 ttggaggcaacatatccagctgttgcgaagaggttacatagtgattgggtttctgatcct 917 Query: 303 gctattcctatagtgactggtttccttgggaagg 336 || ||||| || || || || |||||||| |||| Sbjct: 916 gcaattccaattgttacaggcttccttggaaagg 883
>gb|AC125245.4| Homo sapiens BAC clone RP11-236P13 from 4, complete sequence Length = 135923 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 140 aatattttctgcatatttaaat 161 |||||||||||||||||||||| Sbjct: 88347 aatattttctgcatatttaaat 88368
>gb|AC112227.4| Homo sapiens BAC clone RP13-552G12 from 4, complete sequence Length = 151609 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 140 aatattttctgcatatttaaat 161 |||||||||||||||||||||| Sbjct: 69173 aatattttctgcatatttaaat 69194
>ref|NM_111068.2| Arabidopsis thaliana amino acid binding / aspartate kinase AT3G02020 mRNA, complete cds Length = 2185 Score = 42.1 bits (21), Expect = 1.8 Identities = 63/77 (81%) Strand = Plus / Plus Query: 177 gcacgacagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgcc 236 ||||||||||||||||| ||||| | || |||| ||||| || || ||||| ||||| Sbjct: 986 gcacgacagtatgatgcatttgagatcgggattatcaccacagatgacttcactaatgct 1045 Query: 237 gatattctcgaagcaac 253 |||||||| || ||||| Sbjct: 1046 gatattcttgaggcaac 1062
>gb|AY088366.1| Arabidopsis thaliana clone 6203 mRNA, complete sequence Length = 2164 Score = 42.1 bits (21), Expect = 1.8 Identities = 63/77 (81%) Strand = Plus / Plus Query: 177 gcacgacagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgcc 236 ||||||||||||||||| ||||| | || |||| ||||| || || ||||| ||||| Sbjct: 985 gcacgacagtatgatgcatttgagatcgggattatcaccacagatgacttcactaatgct 1044 Query: 237 gatattctcgaagcaac 253 |||||||| || ||||| Sbjct: 1045 gatattcttgaggcaac 1061
>dbj|BS000215.2| Pan troglodytes chromosome 22 clone:RP43-183P07, map 22, complete sequences Length = 151501 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 tgtctacaagaatattttctgcata 154 |||||||||||||||||| |||||| Sbjct: 60809 tgtctacaagaatattttttgcata 60833
>dbj|AP001698.1| Homo sapiens genomic DNA, chromosome 21q, section 42/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 tgtctacaagaatattttctgcata 154 |||||||||||||||||| |||||| Sbjct: 297182 tgtctacaagaatattttttgcata 297206
>dbj|AP001603.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1411F11, APP-D21S292 region, complete sequence Length = 155767 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 tgtctacaagaatattttctgcata 154 |||||||||||||||||| |||||| Sbjct: 127303 tgtctacaagaatattttttgcata 127327
>ref|XM_515964.1| PREDICTED: Pan troglodytes similar to FLJ44048 protein (LOC459803), mRNA Length = 17703 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tgatgcttttgatcttggct 207 |||||||||||||||||||| Sbjct: 2306 tgatgcttttgatcttggct 2287
>gb|AC150524.3| Bos taurus BAC CH240-89P8 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 189720 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tgatccaaatatttatgcaa 483 |||||||||||||||||||| Sbjct: 102679 tgatccaaatatttatgcaa 102698
>ref|XM_589101.2| PREDICTED: Bos taurus similar to FLJ44048 protein (LOC539740), partial mRNA Length = 17346 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tgatgcttttgatcttggct 207 |||||||||||||||||||| Sbjct: 1163 tgatgcttttgatcttggct 1144
>gb|AE017263.1| Mesoplasma florum L1 complete genome Length = 793224 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 atattttctgcatatttaaa 160 |||||||||||||||||||| Sbjct: 480251 atattttctgcatatttaaa 480232
>ref|NM_001032477.1| Ciona intestinalis fibroblast growth factor 9/16/20 (Fgf9/16/20), mRNA Length = 1791 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 gaaggggcggcagtgacttg 386 |||||||||||||||||||| Sbjct: 171 gaaggggcggcagtgacttg 152
>emb|BX927165.18| Zebrafish DNA sequence from clone DKEYP-120H9 in linkage group 19, complete sequence Length = 137449 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 aatattttctgcatatttaaataa 163 |||||||| ||||||||||||||| Sbjct: 132682 aatattttatgcatatttaaataa 132705
>emb|BX950203.15| Zebrafish DNA sequence from clone CH211-108P22, complete sequence Length = 129504 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 ccattgtttcaggttttttggacg 42 ||||||||||| |||||||||||| Sbjct: 76505 ccattgtttcatgttttttggacg 76528
>gb|AY225171.1| Proctoporus sucullucu UTA-R-51478 NADH dehydrogenase subunit 4 (ND4) gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial genes for mitochondrial products Length = 856 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtctacaagaatattttctg 150 |||||||||||||||||||| Sbjct: 750 gtctacaagaatattttctg 731
>emb|CR450710.5| Zebrafish DNA sequence from clone CH211-197O6 in linkage group 2, complete sequence Length = 201624 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 gggaagggatggaaatcatg 349 |||||||||||||||||||| Sbjct: 29614 gggaagggatggaaatcatg 29595
>emb|AL359641.10| Human DNA sequence from clone RP11-402K9 on chromosome Xq21.32-22.2 Contains a novel pseudogene and a laminin receptor 1 (ribosomal protein SA,67kDa) (LAMR1) pseudogene, complete sequence Length = 175132 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 atcttggctttataaccact 218 |||||||||||||||||||| Sbjct: 169182 atcttggctttataaccact 169201
>emb|AL138878.10| Human DNA sequence from clone RP11-288G3 on chromosome 6 Contains the 3' end of the RIOK1 gene for RIO kinase 1 (yeast), a hetergeneous riboprotein L (HNRNP L) pseudogene, a ribosomal protein S26 pseudogene and a isocitrate dehydrogenase 1 (IDH1) pseudogene, complete sequence Length = 128320 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 agaaatccaggtttggaagg 441 |||||||||||||||||||| Sbjct: 116103 agaaatccaggtttggaagg 116122
>emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in linkage group 19, complete sequence Length = 187377 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 aatattttctgcatatttaaataa 163 |||||||| ||||||||||||||| Sbjct: 115320 aatattttatgcatatttaaataa 115343
>emb|CR936597.1| Homo sapiens mRNA; cDNA DKFZp781I24108 (from clone DKFZp781I24108) Length = 4574 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tgatgcttttgatcttggct 207 |||||||||||||||||||| Sbjct: 2658 tgatgcttttgatcttggct 2639
>gb|AY968817.1| Proctoporus sucullucu voucher UTAR52950 NADH dehydrogenase subunit 4 (ND4) gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial Length = 820 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtctacaagaatattttctg 150 |||||||||||||||||||| Sbjct: 741 gtctacaagaatattttctg 722
>emb|CR933724.1| Homo sapiens mRNA; cDNA DKFZp781I048 (from clone DKFZp781I048) Length = 7478 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 agtatgatgcttttgatctt 203 |||||||||||||||||||| Sbjct: 7266 agtatgatgcttttgatctt 7247
>ref|XM_941207.1| PREDICTED: Homo sapiens FRAS1 related extracellular matrix protein 2 (FREM2), mRNA Length = 16150 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 agtatgatgcttttgatctt 203 |||||||||||||||||||| Sbjct: 14768 agtatgatgcttttgatctt 14749
>ref|XM_929884.1| PREDICTED: Homo sapiens FRAS1 related extracellular matrix protein 2 (FREM2), mRNA Length = 16151 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 agtatgatgcttttgatctt 203 |||||||||||||||||||| Sbjct: 14768 agtatgatgcttttgatctt 14749
>gb|AC092333.2| Homo sapiens chromosome 5 clone RP11-195A20, complete sequence Length = 157402 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcaactgctcaagggtgttg 69 |||||||||||||||||||| Sbjct: 134653 gcaactgctcaagggtgttg 134634
>gb|AC012642.5| Homo sapiens chromosome 5 clone CTD-2287K1, complete sequence Length = 159956 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcaactgctcaagggtgttg 69 |||||||||||||||||||| Sbjct: 72090 gcaactgctcaagggtgttg 72109
>gb|AC015998.8|AC015998 Homo sapiens, clone RP11-15J14, complete sequence Length = 156873 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gtttccttgggaagggatggaaat 345 ||||||| |||||||||||||||| Sbjct: 123379 gtttcctggggaagggatggaaat 123356
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 agaatattttctgcatattt 157 |||||||||||||||||||| Sbjct: 10407806 agaatattttctgcatattt 10407825
>gb|AC018659.35| Homo sapiens 12 BAC RP11-528M18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178145 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 agaaatccaggtttggaagg 441 |||||||||||||||||||| Sbjct: 69388 agaaatccaggtttggaagg 69369
>gb|AC008174.2| Homo sapiens BAC clone RP11-400O18 from 2, complete sequence Length = 103663 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tgatgcttttgatcttggct 207 |||||||||||||||||||| Sbjct: 62946 tgatgcttttgatcttggct 62965
>dbj|AB086097.1| Ciona intestinalis Ci-Fgf9/16/20 mRNA for fibroblast growth factor 9/16/20, complete cds Length = 1791 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 gaaggggcggcagtgacttg 386 |||||||||||||||||||| Sbjct: 171 gaaggggcggcagtgacttg 152
>emb|BX640686.1|HSM806751 Homo sapiens mRNA; cDNA DKFZp686J05112 (from clone DKFZp686J05112) Length = 7315 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 agtatgatgcttttgatctt 203 |||||||||||||||||||| Sbjct: 5911 agtatgatgcttttgatctt 5892
>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091D16 Length = 174222 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 agaatattttctgcatattt 157 |||||||||||||||||||| Sbjct: 108764 agaatattttctgcatattt 108783
>dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0053M06 Length = 175416 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 agaatattttctgcatattt 157 |||||||||||||||||||| Sbjct: 30397 agaatattttctgcatattt 30416
>dbj|AB007650.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA22 Length = 65465 Score = 40.1 bits (20), Expect = 7.0 Identities = 65/80 (81%) Strand = Plus / Plus Query: 183 cagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgatatt 242 ||||||||||| ||||| | || ||||| ||||| ||||| || || ||||| ||||| Sbjct: 13141 cagtatgatgcatttgagatcggatttatcaccacagacgactttactaatgctgatata 13200 Query: 243 ctcgaagcaacttatcctgc 262 || |||||||| || ||||| Sbjct: 13201 cttgaagcaacataccctgc 13220
>emb|Y16255.1|ATY16255 Arabidopsis thaliana ak-lys2 gene Length = 4952 Score = 40.1 bits (20), Expect = 7.0 Identities = 65/80 (81%) Strand = Plus / Plus Query: 183 cagtatgatgcttttgatcttggctttataaccactgacgatttcacaaatgccgatatt 242 ||||||||||| ||||| | || ||||| ||||| ||||| || || ||||| ||||| Sbjct: 2573 cagtatgatgcatttgagatcggatttatcaccacagacgactttactaatgctgatata 2632 Query: 243 ctcgaagcaacttatcctgc 262 || |||||||| || ||||| Sbjct: 2633 cttgaagcaacataccctgc 2652
>gb|AC154822.2| Mus musculus BAC clone RP24-537L18 from 13, complete sequence Length = 167628 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccttgggaagggatggaaat 345 |||||||||||||||||||| Sbjct: 23058 ccttgggaagggatggaaat 23039
>gb|AC116724.13| Mus musculus chromosome 15, clone RP23-267E9, complete sequence Length = 136996 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 attttctgcatatttaaata 162 |||||||||||||||||||| Sbjct: 95951 attttctgcatatttaaata 95970
>dbj|AK116075.1| Ciona intestinalis cDNA, clone:citb007k01, full insert sequence Length = 1791 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 gaaggggcggcagtgacttg 386 |||||||||||||||||||| Sbjct: 171 gaaggggcggcagtgacttg 152
>emb|BX538304.1|HSM806565 Homo sapiens mRNA; cDNA DKFZp686L06109 (from clone DKFZp686L06109) Length = 8951 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 agtatgatgcttttgatctt 203 |||||||||||||||||||| Sbjct: 8739 agtatgatgcttttgatctt 8720
>emb|BX538150.1|HSM806352 Homo sapiens mRNA; cDNA DKFZp686J08113 (from clone DKFZp686J08113) Length = 6452 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 agtatgatgcttttgatctt 203 |||||||||||||||||||| Sbjct: 6240 agtatgatgcttttgatctt 6221
>emb|AL354819.15| Human DNA sequence from clone RP11-7B3 on chromosome 13 Contains the 3' end of the gene for a novel calx-beta domain containing protein similar to sea urchin ECM3, a novel gene, a phospholipase A2 group XII (PLA2G12) pseudogene and a novel KIAA0565 KIAA1074 and breast cancer antigen NY-BR-1 containing pseudogene, complete sequence Length = 153149 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 agtatgatgcttttgatctt 203 |||||||||||||||||||| Sbjct: 93686 agtatgatgcttttgatctt 93667
>gb|AC154735.2| Mus musculus BAC clone RP24-383B6 from chromosome 16, complete sequence Length = 224440 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 attggcaaagccttggggtt 418 |||||||||||||||||||| Sbjct: 182939 attggcaaagccttggggtt 182958
>emb|AL390025.1| Human DNA sequence from clone RP3-336K20 on chromosome 6 Contains a pseudogene similar to hetergeneous riboprotein L (HNRNP L), to Ribosomal protein S26, a pseudogene similar to isocitrate dehydrogenase (NADP+), STSs and GSSs, complete sequence Length = 52747 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 agaaatccaggtttggaagg 441 |||||||||||||||||||| Sbjct: 40530 agaaatccaggtttggaagg 40549
>dbj|AP003465.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1043D8 Length = 230879 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gtttccttgggaagggatggaaat 345 ||||||| |||||||||||||||| Sbjct: 48684 gtttcctggggaagggatggaaat 48661 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,731,307 Number of Sequences: 3902068 Number of extensions: 4731307 Number of successful extensions: 86588 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 86363 Number of HSP's gapped (non-prelim): 207 length of query: 517 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 494 effective length of database: 17,143,297,704 effective search space: 8468789065776 effective search space used: 8468789065776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
