ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags21e14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 311 2e-81
2dbj|AK107282.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 2e-81
3dbj|AK101317.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 2e-81
4gb|AY029561.1| Zea mays putative methyl-binding domain protein M... 264 3e-67
5gb|AY029560.1| Zea mays putative methyl-binding domain protein M... 248 2e-62
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
7dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
8gb|AC154508.2| Mus musculus BAC clone RP24-96P6 from chromosome ... 42 2.2
9gb|BC034347.1| Mus musculus RIKEN cDNA C530044N13 gene, mRNA (cD... 42 2.2
10gb|AC154509.2| Mus musculus BAC clone RP23-207P21 from chromosom... 42 2.2
11dbj|AK133977.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 42 2.2
12ref|NM_146067.2| Mus musculus RIKEN cDNA C530044N13 gene (C53004... 42 2.2
13dbj|AK029379.1| Mus musculus 0 day neonate head cDNA, RIKEN full... 42 2.2
14gb|BC025476.1| Mus musculus RIKEN cDNA C530044N13 gene, mRNA (cD... 42 2.2
15dbj|AK080876.1| Mus musculus 4 days neonate male adipose cDNA, R... 42 2.2
16dbj|AK032288.1| Mus musculus adult male olfactory brain cDNA, RI... 42 2.2
17dbj|AK049721.1| Mus musculus 12 days embryo spinal cord cDNA, RI... 42 2.2
18ref|XM_464523.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.8
19gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 8.8
20gb|AC139746.15| Medicago truncatula clone mth2-17b20, complete s... 40 8.8
21emb|Z82193.1|HS260J9 Human DNA sequence from clone RP1-260J9 on ... 40 8.8
22gb|AC183109.2| Pan troglodytes BAC clone CH251-317D18 from chrom... 40 8.8
23gb|AC116427.1| Homo sapiens chromosome 5 clone CTD-2316N20, comp... 40 8.8
24gb|AC020703.7| Homo sapiens BAC clone RP11-259G7 from 4, complet... 40 8.8
25gb|AC026400.4| Homo sapiens chromosome 5 clone CTB-173O12, compl... 40 8.8
26gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 40 8.8
27dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
28gb|AC139493.3| Homo sapiens chromosome 5 clone RP11-844P9, compl... 40 8.8
29gb|AC138819.3| Homo sapiens chromosome 5 clone RP11-1101H11, com... 40 8.8
30gb|AC140125.3| Homo sapiens chromosome 5 clone RP11-1026M7, comp... 40 8.8
31gb|AE004814.1| Pseudomonas aeruginosa PAO1, section 375 of 529 o... 40 8.8
32gb|AC008469.4|AC008469 Homo sapiens chromosome 5 clone CTC-365H2... 40 8.8
33dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
34gb|U93363.2|PPU93363 Pseudomonas pseudoalcaligenes YjgF-like pro... 40 8.8
35gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 40 8.8
36gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
37emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.8
38emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.8
39gb|AC164120.2| Mus musculus BAC clone RP24-289J17 from chromosom... 40 8.8
40emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 8.8 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  311 bits (157), Expect = 2e-81
 Identities = 235/261 (90%)
 Strand = Plus / Minus

                                                                            
Query: 381      gccatgtattggggcattcactatccagtgtgctaggtgcttcaaatggagacttattcc 440
                ||||| |||||||||||||||| |||| ||||| | ||| ||||||||||||||||||||
Sbjct: 18863046 gccatctattggggcattcactgtccaatgtgccaagtgtttcaaatggagacttattcc 18862987

                                                                            
Query: 441      aacgaaagagaagtacgaagaaatacgtgagcatattatacaggaaccttttgactgcga 500
                 || ||||||||||| |||||||| ||||||  ||||||||||||||||||||| |||||
Sbjct: 18862986 gacaaaagagaagtatgaagaaattcgtgagtgtattatacaggaaccttttgagtgcga 18862927

                                                                            
Query: 501      acgagcccgtgaatggaaacctgatgtaacatgcgatgatcaagaagatatatctcagga 560
                |||||||||||| |||| |||||||||||||||  |||||| ||||||||||||||||||
Sbjct: 18862926 acgagcccgtgagtggagacctgatgtaacatgtaatgatccagaagatatatctcagga 18862867

                                                                            
Query: 561      tggaagcagactctgggctatcgacaaacccaatattgcacagcctcctgctggatggga 620
                ||||||||| || |||||||| |||||||||||||||||||  |||||| ||||||||||
Sbjct: 18862866 tggaagcaggctttgggctattgacaaacccaatattgcactacctcctcctggatggga 18862807

                                     
Query: 621      aaggcagattagaataagagg 641
                ||| ||||| |||||||||||
Sbjct: 18862806 aagacagatcagaataagagg 18862786
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>dbj|AK107282.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-B01, full
           insert sequence
          Length = 1312

 Score =  311 bits (157), Expect = 2e-81
 Identities = 235/261 (90%)
 Strand = Plus / Plus

                                                                       
Query: 381 gccatgtattggggcattcactatccagtgtgctaggtgcttcaaatggagacttattcc 440
           ||||| |||||||||||||||| |||| ||||| | ||| ||||||||||||||||||||
Sbjct: 709 gccatctattggggcattcactgtccaatgtgccaagtgtttcaaatggagacttattcc 768

                                                                       
Query: 441 aacgaaagagaagtacgaagaaatacgtgagcatattatacaggaaccttttgactgcga 500
            || ||||||||||| |||||||| ||||||  ||||||||||||||||||||| |||||
Sbjct: 769 gacaaaagagaagtatgaagaaattcgtgagtgtattatacaggaaccttttgagtgcga 828

                                                                       
Query: 501 acgagcccgtgaatggaaacctgatgtaacatgcgatgatcaagaagatatatctcagga 560
           |||||||||||| |||| |||||||||||||||  |||||| ||||||||||||||||||
Sbjct: 829 acgagcccgtgagtggagacctgatgtaacatgtaatgatccagaagatatatctcagga 888

                                                                       
Query: 561 tggaagcagactctgggctatcgacaaacccaatattgcacagcctcctgctggatggga 620
           ||||||||| || |||||||| |||||||||||||||||||  |||||| ||||||||||
Sbjct: 889 tggaagcaggctttgggctattgacaaacccaatattgcactacctcctcctggatggga 948

                                
Query: 621 aaggcagattagaataagagg 641
           ||| ||||| |||||||||||
Sbjct: 949 aagacagatcagaataagagg 969
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>dbj|AK101317.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034D09, full
           insert sequence
          Length = 1751

 Score =  311 bits (157), Expect = 2e-81
 Identities = 235/261 (90%)
 Strand = Plus / Plus

                                                                       
Query: 381 gccatgtattggggcattcactatccagtgtgctaggtgcttcaaatggagacttattcc 440
           ||||| |||||||||||||||| |||| ||||| | ||| ||||||||||||||||||||
Sbjct: 631 gccatctattggggcattcactgtccaatgtgccaagtgtttcaaatggagacttattcc 690

                                                                       
Query: 441 aacgaaagagaagtacgaagaaatacgtgagcatattatacaggaaccttttgactgcga 500
            || ||||||||||| |||||||| ||||||  ||||||||||||||||||||| |||||
Sbjct: 691 gacaaaagagaagtatgaagaaattcgtgagtgtattatacaggaaccttttgagtgcga 750

                                                                       
Query: 501 acgagcccgtgaatggaaacctgatgtaacatgcgatgatcaagaagatatatctcagga 560
           |||||||||||| |||| |||||||||||||||  |||||| ||||||||||||||||||
Sbjct: 751 acgagcccgtgagtggagacctgatgtaacatgtaatgatccagaagatatatctcagga 810

                                                                       
Query: 561 tggaagcagactctgggctatcgacaaacccaatattgcacagcctcctgctggatggga 620
           ||||||||| || |||||||| |||||||||||||||||||  |||||| ||||||||||
Sbjct: 811 tggaagcaggctttgggctattgacaaacccaatattgcactacctcctcctggatggga 870

                                
Query: 621 aaggcagattagaataagagg 641
           ||| ||||| |||||||||||
Sbjct: 871 aagacagatcagaataagagg 891
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>gb|AY029561.1| Zea mays putative methyl-binding domain protein MBD111 mRNA,
           complete cds
          Length = 1452

 Score =  264 bits (133), Expect = 3e-67
 Identities = 232/265 (87%)
 Strand = Plus / Plus

                                                                       
Query: 378 atcgccatgtattggggcattcactatccagtgtgctaggtgcttcaaatggagacttat 437
           |||||||| |||||| ||||||||| |||| |||||||  || || |||||||| |||||
Sbjct: 300 atcgccatctattggagcattcactgtccaatgtgctaaatgttttaaatggaggcttat 359

                                                                       
Query: 438 tccaacgaaagagaagtacgaagaaatacgtgagcatattatacaggaaccttttgactg 497
           |||||||||||||||||| |||||||| ||||| | ||||||| ||||||||||||  ||
Sbjct: 360 tccaacgaaagagaagtatgaagaaattcgtgaacgtattatagaggaaccttttgtatg 419

                                                                       
Query: 498 cgaacgagcccgtgaatggaaacctgatgtaacatgcgatgatcaagaagatatatctca 557
           | || |||| |||||||||| |||||||||||||||| |||| | |||||||||||||||
Sbjct: 420 caaaagagctcgtgaatggagacctgatgtaacatgcaatgacccagaagatatatctca 479

                                                                       
Query: 558 ggatggaagcagactctgggctatcgacaaacccaatattgcacagcctcctgctggatg 617
           |||||| ||||| || |||||||| |||||||||||||||||||| || |||   |||||
Sbjct: 480 ggatggtagcaggctttgggctattgacaaacccaatattgcacaaccccctcgcggatg 539

                                    
Query: 618 ggaaaggcagattagaataagaggt 642
           ||||||||||||||| |||||||||
Sbjct: 540 ggaaaggcagattaggataagaggt 564
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>gb|AY029560.1| Zea mays putative methyl-binding domain protein MBD108 mRNA,
           complete cds
          Length = 1431

 Score =  248 bits (125), Expect = 2e-62
 Identities = 227/261 (86%)
 Strand = Plus / Plus

                                                                       
Query: 382 ccatgtattggggcattcactatccagtgtgctaggtgcttcaaatggagacttattcca 441
           |||| |||||| ||||||||| |||| |||||||  || || |||||||| |||||||||
Sbjct: 336 ccatctattggagcattcactgtccaatgtgctaaatgttttaaatggaggcttattcca 395

                                                                       
Query: 442 acgaaagagaagtacgaagaaatacgtgagcatattatacaggaaccttttgactgcgaa 501
           || |||||||| ||||||||||| ||||| | ||||||||||||||||||||  ||| ||
Sbjct: 396 acaaaagagaaatacgaagaaattcgtgaacgtattatacaggaaccttttgtatgcaaa 455

                                                                       
Query: 502 cgagcccgtgaatggaaacctgatgtaacatgcgatgatcaagaagatatatctcaggat 561
            |||| |||||||||| ||||||| |||||||| |||| | |||||||||||||||||| 
Sbjct: 456 agagctcgtgaatggagacctgatataacatgcaatgacccagaagatatatctcaggac 515

                                                                       
Query: 562 ggaagcagactctgggctatcgacaaacccaatattgcacagcctcctgctggatgggaa 621
           || ||||| || |||||||| |||||||||||||||||||| || |||  ||||||||||
Sbjct: 516 ggtagcaggctttgggctattgacaaacccaatattgcacaaccccctcatggatgggaa 575

                                
Query: 622 aggcagattagaataagaggt 642
           ||||||||||| |||||||||
Sbjct: 576 aggcagattaggataagaggt 596
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 118/149 (79%)
 Strand = Plus / Plus

                                                                            
Query: 418      tgcttcaaatggagacttattccaacgaaagagaagtacgaagaaatacgtgagcatatt 477
                ||||||||||||||  | || ||||| |||||||| || ||||| ||||||||| |||||
Sbjct: 29077870 tgcttcaaatggaggatcatcccaacaaaagagaaatatgaagagatacgtgagaatatt 29077929

                                                                            
Query: 478      atacaggaaccttttgactgcgaacgagcccgtgaatggaaacctgatgtaacatgcgat 537
                   |||||    ||||  || ||| |||| ||||||||||| | || | || | |||| |
Sbjct: 29077930 tgtcaggatgtgtttgtatgtgaaagagctcgtgaatggaaccgtgttatatcttgcgtt 29077989

                                             
Query: 538      gatcaagaagatatatctcaggatggaag 566
                ||||  ||||||||||| |||||||||||
Sbjct: 29077990 gatcctgaagatatatcacaggatggaag 29078018



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 98      cccaccgccagccgcccgta 117
               ||||||||||||||||||||
Sbjct: 9786861 cccaccgccagccgcccgta 9786880
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>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0596H10
          Length = 166570

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 118/149 (79%)
 Strand = Plus / Plus

                                                                         
Query: 418   tgcttcaaatggagacttattccaacgaaagagaagtacgaagaaatacgtgagcatatt 477
             ||||||||||||||  | || ||||| |||||||| || ||||| ||||||||| |||||
Sbjct: 92857 tgcttcaaatggaggatcatcccaacaaaagagaaatatgaagagatacgtgagaatatt 92916

                                                                         
Query: 478   atacaggaaccttttgactgcgaacgagcccgtgaatggaaacctgatgtaacatgcgat 537
                |||||    ||||  || ||| |||| ||||||||||| | || | || | |||| |
Sbjct: 92917 tgtcaggatgtgtttgtatgtgaaagagctcgtgaatggaaccgtgttatatcttgcgtt 92976

                                          
Query: 538   gatcaagaagatatatctcaggatggaag 566
             ||||  ||||||||||| |||||||||||
Sbjct: 92977 gatcctgaagatatatcacaggatggaag 93005
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>gb|AC154508.2| Mus musculus BAC clone RP24-96P6 from chromosome 16, complete sequence
          Length = 214625

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 283    ttgaagtcagaaacagtagat 303
              |||||||||||||||||||||
Sbjct: 152088 ttgaagtcagaaacagtagat 152068
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>gb|BC034347.1| Mus musculus RIKEN cDNA C530044N13 gene, mRNA (cDNA clone MGC:27760
           IMAGE:2654874), complete cds
          Length = 2343

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 283 ttgaagtcagaaacagtagat 303
           |||||||||||||||||||||
Sbjct: 965 ttgaagtcagaaacagtagat 945
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>gb|AC154509.2| Mus musculus BAC clone RP23-207P21 from chromosome 16, complete sequence
          Length = 203692

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 283    ttgaagtcagaaacagtagat 303
              |||||||||||||||||||||
Sbjct: 126541 ttgaagtcagaaacagtagat 126561
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>dbj|AK133977.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:5730589C11 product:hypothetical
            Metallophosphoesterase containing protein, full insert
            sequence
          Length = 2697

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 283  ttgaagtcagaaacagtagat 303
            |||||||||||||||||||||
Sbjct: 1317 ttgaagtcagaaacagtagat 1297
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>ref|NM_146067.2| Mus musculus RIKEN cDNA C530044N13 gene (C530044N13Rik), mRNA
          Length = 2664

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 283  ttgaagtcagaaacagtagat 303
            |||||||||||||||||||||
Sbjct: 1324 ttgaagtcagaaacagtagat 1304
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>dbj|AK029379.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
            library, clone:4833416G05 product:hypothetical
            Metallo-dependent phosphatases structure containing
            protein, full insert sequence
          Length = 2575

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 283  ttgaagtcagaaacagtagat 303
            |||||||||||||||||||||
Sbjct: 1248 ttgaagtcagaaacagtagat 1228
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>gb|BC025476.1| Mus musculus RIKEN cDNA C530044N13 gene, mRNA (cDNA clone
            IMAGE:5352934), partial cds
          Length = 2638

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 283  ttgaagtcagaaacagtagat 303
            |||||||||||||||||||||
Sbjct: 1244 ttgaagtcagaaacagtagat 1224
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>dbj|AK080876.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
            enriched library, clone:B430114C18 product:hypothetical
            Serine/threonine specific protein phosphatase containing
            protein, full insert sequence
          Length = 2615

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 283  ttgaagtcagaaacagtagat 303
            |||||||||||||||||||||
Sbjct: 1281 ttgaagtcagaaacagtagat 1261
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>dbj|AK032288.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430515N22 product:similar to
            CDNA FLJ11151 FIS, CLONE PLACE1006883 [Homo sapiens],
            full insert sequence
          Length = 2613

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 283  ttgaagtcagaaacagtagat 303
            |||||||||||||||||||||
Sbjct: 1286 ttgaagtcagaaacagtagat 1266
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>dbj|AK049721.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length
            enriched library, clone:C530044N13 product:similar to
            CDNA FLJ11151 FIS, CLONE PLACE1006883 [Homo sapiens],
            full insert sequence
          Length = 2664

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 283  ttgaagtcagaaacagtagat 303
            |||||||||||||||||||||
Sbjct: 1324 ttgaagtcagaaacagtagat 1304
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>ref|XM_464523.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 225

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 117 accggcctcgatctctccgc 136
           ||||||||||||||||||||
Sbjct: 24  accggcctcgatctctccgc 5
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     ccgccgccggtggcggcgac 76
              ||||||||||||||||||||
Sbjct: 834978 ccgccgccggtggcggcgac 834959
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>gb|AC139746.15| Medicago truncatula clone mth2-17b20, complete sequence
          Length = 118157

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   atgaatttggagaagacagt 333
             ||||||||||||||||||||
Sbjct: 66404 atgaatttggagaagacagt 66423
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>emb|Z82193.1|HS260J9 Human DNA sequence from clone RP1-260J9 on chromosome X Contains part
             of the FGF13 gene for fibroblast growth factor 13, a novel
             gene and a CpG island, complete sequence
          Length = 98209

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   cagtgtgctaggtgcttcaa 425
             ||||||||||||||||||||
Sbjct: 64753 cagtgtgctaggtgcttcaa 64772
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>gb|AC183109.2| Pan troglodytes BAC clone CH251-317D18 from chromosome 5, complete
             sequence
          Length = 169688

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 604   cctcctgctggatgggaaag 623
             ||||||||||||||||||||
Sbjct: 36135 cctcctgctggatgggaaag 36116
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>gb|AC116427.1| Homo sapiens chromosome 5 clone CTD-2316N20, complete sequence
          Length = 103938

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 604   cctcctgctggatgggaaag 623
             ||||||||||||||||||||
Sbjct: 70131 cctcctgctggatgggaaag 70112
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>gb|AC020703.7| Homo sapiens BAC clone RP11-259G7 from 4, complete sequence
          Length = 201105

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   agtcagaaacagtagataaa 306
             ||||||||||||||||||||
Sbjct: 82059 agtcagaaacagtagataaa 82078
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>gb|AC026400.4| Homo sapiens chromosome 5 clone CTB-173O12, complete sequence
          Length = 118469

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 604   cctcctgctggatgggaaag 623
             ||||||||||||||||||||
Sbjct: 72694 cctcctgctggatgggaaag 72675
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 311     aagatgaatttggagaagac 330
               ||||||||||||||||||||
Sbjct: 1247411 aagatgaatttggagaagac 1247430
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 57       ccgccgccggtggcggcgac 76
                ||||||||||||||||||||
Sbjct: 19475339 ccgccgccggtggcggcgac 19475320
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>gb|AC139493.3| Homo sapiens chromosome 5 clone RP11-844P9, complete sequence
          Length = 173607

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 604   cctcctgctggatgggaaag 623
             ||||||||||||||||||||
Sbjct: 60416 cctcctgctggatgggaaag 60435
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>gb|AC138819.3| Homo sapiens chromosome 5 clone RP11-1101H11, complete sequence
          Length = 182715

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 604   cctcctgctggatgggaaag 623
             ||||||||||||||||||||
Sbjct: 22438 cctcctgctggatgggaaag 22457
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>gb|AC140125.3| Homo sapiens chromosome 5 clone RP11-1026M7, complete sequence
          Length = 217057

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 604    cctcctgctggatgggaaag 623
              ||||||||||||||||||||
Sbjct: 167256 cctcctgctggatgggaaag 167275
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>gb|AE004814.1| Pseudomonas aeruginosa PAO1, section 375 of 529 of the complete
            genome
          Length = 10042

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   cgccggtggcggcgactacc 80
            ||||||||||||||||||||
Sbjct: 2179 cgccggtggcggcgactacc 2160
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>gb|AC008469.4|AC008469 Homo sapiens chromosome 5 clone CTC-365H24, complete sequence
          Length = 104325

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 604  cctcctgctggatgggaaag 623
            ||||||||||||||||||||
Sbjct: 8615 cctcctgctggatgggaaag 8596
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>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0456E06
          Length = 164353

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    cccaccgccagccgcccgta 117
             ||||||||||||||||||||
Sbjct: 77103 cccaccgccagccgcccgta 77122
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>gb|U93363.2|PPU93363 Pseudomonas pseudoalcaligenes YjgF-like protein,
            2-aminophenol-1,6-dioxygenase beta subunit (amnB),
            2-aminophenol-1,6-dioxygenase alpha subunit (amnA), and
            2-aminomuconic acid semialdehyde dehydrogenase (amnC)
            genes, complete cds
          Length = 5202

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 61   cgccggtggcggcgactacc 80
            ||||||||||||||||||||
Sbjct: 4993 cgccggtggcggcgactacc 5012
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 311     aagatgaatttggagaagac 330
               ||||||||||||||||||||
Sbjct: 2978412 aagatgaatttggagaagac 2978393
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 57       ccgccgccggtggcggcgac 76
                ||||||||||||||||||||
Sbjct: 19401552 ccgccgccggtggcggcgac 19401533
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>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 163490

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     ccgccgccggtggcggcgac 76
              ||||||||||||||||||||
Sbjct: 153033 ccgccgccggtggcggcgac 153014
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>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 144596

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   ccgccgccggtggcggcgac 76
            ||||||||||||||||||||
Sbjct: 7520 ccgccgccggtggcggcgac 7501
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>gb|AC164120.2| Mus musculus BAC clone RP24-289J17 from chromosome 14, complete sequence
          Length = 147050

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 286    aagtcagaaacagtagataaagtg 309
              |||||||||||||||||| |||||
Sbjct: 105781 aagtcagaaacagtagatcaagtg 105804
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 147     tcttgcagaacctatggaca 166
               ||||||||||||||||||||
Sbjct: 1462029 tcttgcagaacctatggaca 1462010


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,910,452
Number of Sequences: 3902068
Number of extensions: 4910452
Number of successful extensions: 92623
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92259
Number of HSP's gapped (non-prelim): 364
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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